Lsi03G004090 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G004090
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ABC transporter domain-containing protein
Location	chr03: 4666444 .. 4671852 (+)
RNA-Seq Expression	Lsi03G004090
Synteny	Lsi03G004090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTGTTGATGTTATTGTTAAACTTGATTCGATTACTGAGTCTATTTTCTATTCTTAAGGTTAGGGATTTAAGCTATCGACCTCCAGGGACAGAGCATTCTCTTCTCAACGCAGTTAATTTTTCCCTTCGAGAGAAAAGGTTCAATTTGCTGCCCTGAATTCTCAGTGTATGTTTGTGTAATATATTGTGACGAGGGGTTCGAACTTCTGCTTGTTAATAGCTTGGTTTTTAGTGACTTGCTTGACTAAAACTAATTAAAAATATTTTTCAAATTTACCATGATGTTTGACTATATGACTAAAACTTCTTTTGAGAATTTTATGAACGTTTAATCAACATTCTTCTTAAAAGTTATCTCATAATCTCTAATGATGATCATGAATAGGAAAATGATTTTAAAAGTTGATGATTTAATAAGTTTTCTTTCTGAAGCCTAAATTTTTCTCGAGTTCAAATACTTATATATAGCAGTTCAGTCTGGCTAACCTGAATCAACTATCAAGGCAGTACTTGTTAAGGACTTGTCTGTTCTCTCTTACAGTAATAAAGGATGTTTCACTTTCATCACATATTTTTTATTTGGACTTCTTCCCTAAGATTTCTTTCTCAGTCTAATTAATGCATACATATACCTCATTATCCTTCCCACATTACTTTCCTTTTCTGTTGATTTATGCAGTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGGAAAACTACTTTATTGCAGGTTAATTTTCTCTGAATTTTTAATGTTTTAGGCTTTCCGTTACTTCTCTTATGGTCTCTGTTATCTACTTGTTTGTTGATTTATTGTTTATAAGTAAGTTAATCTTTCTTCCTGTCCTCGTTTAGCTTCTTGCAGGTCTGAGCAAACCAACTTCAGGTTCCATTTATGTCCAAAAGTACGATAAAGATGGCAAACCATGTCAGTCTTCTCAGCCATTAACCCCTGAGAGAGTTGGCATTGTCTTTCAATTTCCAGAGAGGTAGCGTCCATTTTGGTTAGCCTTGATAGTACTAATATTTTGAAACTAGTTTCTATTATAAGAAGCATTGCAACTGCTAGGCTGCTTTAACCTCATCGAGTTGTGTGGTCTTTCTTTTTCATACATATCATCTCATTTGCCTGCTATATCTTCATTTCTCTGGGCGGGAAACACTTGTATTAATGAGCAAAGTATGTAAGAAGGACTATGTTTCCAACCCAAAAGATCGGAACAAAGGAGCTTATTGAAAAACCCTTCAATTGGTCAGAAAGAAACTAGAGAAAAAATACAAAACTTGTCATCGAGGAAGTCATCTAGACACATCAATCCAATCCTGAATTTCATTCTGCTCCTTCCATTTCTTTCAATTAACCTTTCTGTTCTGTTCCCTTACTAATTTTTCAAGAAAAGAAAAAACCGCTAAAATGGAATTGAACTGAAGGATTCTTATTTTAGGATTAAATACTGGACTTTAGTTAACAATAGAGATGGATGTAATCCTATTTCAAGCATAAAGCTCCTATAACTTCAAATTTTCCTTGGAACTTCTCCCATAAGTTTCTGTCTAGCTTGCAATACCCAAGTGATCAATTTCTTCTGAAGCCTTCTCACACAAAATAACTTAAATGGATTAAAAGTCGTATGTGGGTTGGTTTTGGTTATCTTAACCTTGTTAAGAGTTAAGACCTGGTTGCCAGATGAACAGTAGGATCATATATGATTTTTGGTTTTCTAAATCAGCTGATGTTCCCCCCCCCCCCGATAAGTGTACAATCTGTCTTGAGCAAAGAACTAAAGAAGGATTTTCCTAGAAGGCAAGAATATTGTGGAGGTTCATGAATCCAGGATTTATCAATCAACTTCATAATTCTTTAATCTTTCATTTGTTAAGGATAAACGTATACTTAATGGGCAACAAAATTAGCATTATCTCCATTGACAGTCGTGTGTGTTAGAATAATATTTCTAATTTGTTCAATATTTTATATATACACACTATTGAAAATTTCAAATTCTAAAAATTTTGTTAGTTTGTGAACCATCATGGGTTGACCTAGTGGTAAAAAGGAGACATAGTCTTAATAAATGGCTAAGAGGTCAGAGGTTCAATCCATGGTGGTCATCTACCTAGGAATTAATTTCCTACGAGTTTCCTTGACACCCAAATGTTGTAGAGTCAGGTGGGTTGTCCCGTGAGAAAAAAAATTATTTTTTTTAGTTTGTGCTTTTGTTGTGATGAAACCCAAATAACTAGAATAAGATTGGAAGGTAAAAGGATAGAGGAATACAATAACTCTCCAAGTATTTGAGATATAGAAGTTAGAACTTCTTTCTCGAGCGAGAATACTTTGCCTAAACCCACTTAACAATTGCTTACTTTCATCTCCTCTTACTCCCTCTATTTTTTCCAACTCCTTGACTAATGACTAATATACTCTTAATTCCCTAATAATATTCATAACTACTTCAATGGTATTCCTACGGGCTTGTTGCCAGTATTGTCAATTTTCCATATGATTGGAAGGCACAATTCTGTCCTTATTCTCAAACTTTTTCATCATTTATAGCTTATATTATGATACTTGAAAAGTAGCTGAGAACATTCTTTTGCTGAAGGTAGGTACTTTATCACAGACAGTGTGCTTGATGAAGTCACATTTGGCTGGCCACGGCAAAGGAGTGATTTTCGTTTGAAAGAGAACCTTGGCTTGAGACTCCAAAAAGCAATTAATTGGGTACTTTTGATCTTTCCTCACCAACAGTTGTTTACATGTTTTTATTGCTTTGCTTTAATTATTATTACCACGATGGATTTCTTTATTCCTTTCTGTCAATGACTGTAGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTTAGTGGTGGCTACAAGCGCCGCCTTGCCTTGGCAATCCAATTGGTAAGCCTAAATAACAAAATGAACTCATGTGATTACCTTCGATTTGTTAAGAAAAGGTAAAGACATGTTTGAATGAACTTAGGGCATTTATCAATTGGGAATAGAATTTGGAGTAAAAAATTTTAACTGCAATTGTGCCTTTTATTTTTGGTCTAATCGAACAACATTTTAAAGTTAGATAAATAGAATAATTGTTTATTGATAAAAAATACTGTCCACTCCACAATATTAGGGGTAGTTGGGGTTGGGGTACTACTATAATTAATGACTACATAATCTTTATTGCTGACGTGGAGAAAAAAATTAAGGCTATTCCTCTTTTATCTGATTCTGATTCCAAAATATTTATTTAAAACCTAAATCATTGTTTTATTTGTACCTTTCAAAATGCTTGTGTAGCTGCATTCTTATACATTGAATAAGTCACATTTTTGCAGGTGCAGATCCCAGATCTGTTAATACTGGATGAGCCTCTAGCTGGTCTTGGTATGAAGATCAATTTCACGATCCTTATAAACATAATAATATTGTCTAAAGAGTAAAGAAGTTGAATGTATCACAAACTCTGGGATTCAGTAAAATTAAAAATTCAACTAAGGAGATTTTGGATCATTTGAGTCACGTATTTCTGTTGACTTAATGGCACTTCTACCATTGAAATCCGGGAATTTAAGGTCTTGACCTTTAGTATGTCATTAATTAAATCAGAAGGCAAGAATGAATAGCTTCCACTTCACGTTGTTTTTAGTTATTCATACTTGGGTTCTCATTTGTCCTTGGCTTTACATTATTTTAACTATAATATCTTGGAACGAATGTTTTCTTGGAAGAATTTTTCTATTGTTTTTATAAGGACTGGTTCATATCGCTTGGCATCTTAGCATATGATGCTTTTTGAAACGTAGGATGTAAGGCCTTTGCTTTTGTTTTATGCCCTTTCATTCTTATATGATAGATTGGAAGGCTCGTGCTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTCGTCGTCAGCCATGATCTCAAGTTAGTCTGCTTTTTCACTCCTAGCTTTGTTTGAACTATTAGTTCTATCAGTTGATTTCTTGTCCCAAAAGGAAAAATCAATTCTTTAGTTACATGATCAATTTAAGGATTTGGTAGAGAGAAAAAAAAACGCAAGTTCATCCTCTGATGATCTGATGTTAGTTTGGAATCATGTATTTAAAATTCTATTAATGGATAGAGCTCTTAATTCAATTGGGCCATATATTTGTTATCTTTCTGTTAGCTATAGTAATGGAAAGCTGATGGGGCTTCTCTCTTTTTTTTGTGTGTGTGTATATATATAATAATAATGTCGATGTAGCTTCAAAATATATCTAGAAAATATTCCAAATGGTTGCAAGTAATTCTGAAACTTGAAATCTGTCAAGAATCAAGTTTATTTCTCCAAACCTAATGCAACTACAGTTCATTGCTTCTACCAAACCAACATCTTGTAAAAGACAAGTAATACTGTCATTCTTCTGCCTTTTGGTTAAACTATTCTGATTTCATTTGGTAGAGGTGTTCATGTTCAGTGTTCACTCCGGTAATTCTGTGTGCCTTTCAGAGAGTTCGCTGGCTTGGTTGACTATTCATGGAGAATGGAAATGGGCGGTGTTCTTAGAGAAGAACCTCTGCCTATTTAATTTGTAACTGCTAACCATGCGTTAATGCTGTGAGTATTATTTCCTGCTGCTACTCCTACTTTATTCTATCATCTTTATGCTTCCATTTTTGTTCATAAAAACATGCCACAATCTGTAAAACCGAACTTATGTTGGTATGAATTCTCCTCATTTTGATGAAATATTTTGTTTGCCTTCAATTTTCAGCATGGCATCAACCACAGCTGTGTACACAAGTGCAGATTTATTCATGCTTTTGCAAGTCAGTACATCAACTCAAGGACCAAAACTTGTTGGAGATTCACAACCTTATGGTAACCAACTCATTTTGAATTTTTGAATCTTTGTAAATTCAATAATAGTATAAAAAATTGAACATTTTGCAGAAACAATTTTGGACTTAAGACCCTTTCCAAATCTTCAAATGACTAAACATTGTCATTACCTATCTGTAACCACTTCAAACGAGTTGTAATGTAGAGAAGCTCGAGTTTGTTGAAATCGATCTCGTTCTATATCGACATACAGCCCTTAACAACTGGGGACACAAATTAAAAGGCGTTTAGTTTTCTCAGTTTTGGAAGCTTGGGATTTTGGCTTCACCTGTTTTCTGGACATAGTTTGCAGATGATGAAACTTGAAGGCGTCATCCCACTAAATAAATTGGTTAATTGTACAATGATTTAGTGTGAAAAGAATAACGTGATTCATGAATACATTATATTTTTTAAGTTTATAGGGGTCCTTCCAGTCTTCCACTATAATTTGTATGGAGTCAATTTCCATTTATTCTTTACCAGTTTGGCGAGTGGCTAA

mRNA sequence

ATGGGGATTGTTAGGGATTTAAGCTATCGACCTCCAGGGACAGAGCATTCTCTTCTCAACGCAGTTAATTTTTCCCTTCGAGAGAAAAGTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGGAAAACTACTTTATTGCAGCTTCTTGCAGGTCTGAGCAAACCAACTTCAGGTTCCATTTATGTCCAAAAGTACGATAAAGATGGCAAACCATGTCAGTCTTCTCAGCCATTAACCCCTGAGAGAGTTGGCATTGTCTTTCAATTTCCAGAGAGGTACTTTATCACAGACAGTGTGCTTGATGAAGTCACATTTGGCTGGCCACGGCAAAGGAGTGATTTTCGTTTGAAAGAGAACCTTGGCTTGAGACTCCAAAAAGCAATTAATTGGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTTAGTGGTGGCTACAAGCGCCGCCTTGCCTTGGCAATCCAATTGGTGCAGATCCCAGATCTGTTAATACTGGATGAGCCTCTAGCTGGTCTTGATTGGAAGGCTCGTGCTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTCGTCGTCAGCCATGATCTCAAAGGTGTTCATGTTCAGTGTTCACTCCGCATGGCATCAACCACAGCTGTGTACACAAGTGCAGATTTATTCATGCTTTTGCAAGTCAGTACATCAACTCAAGGACCAAAACTTGTTGGAGATTCACAACCTTATGGGGTCCTTCCAGTCTTCCACTATAATTTGTATGGAGTCAATTTCCATTTATTCTTTACCAGTTTGGCGAGTGGCTAA

Coding sequence (CDS)

ATGGGGATTGTTAGGGATTTAAGCTATCGACCTCCAGGGACAGAGCATTCTCTTCTCAACGCAGTTAATTTTTCCCTTCGAGAGAAAAGTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGGAAAACTACTTTATTGCAGCTTCTTGCAGGTCTGAGCAAACCAACTTCAGGTTCCATTTATGTCCAAAAGTACGATAAAGATGGCAAACCATGTCAGTCTTCTCAGCCATTAACCCCTGAGAGAGTTGGCATTGTCTTTCAATTTCCAGAGAGGTACTTTATCACAGACAGTGTGCTTGATGAAGTCACATTTGGCTGGCCACGGCAAAGGAGTGATTTTCGTTTGAAAGAGAACCTTGGCTTGAGACTCCAAAAAGCAATTAATTGGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTTAGTGGTGGCTACAAGCGCCGCCTTGCCTTGGCAATCCAATTGGTGCAGATCCCAGATCTGTTAATACTGGATGAGCCTCTAGCTGGTCTTGATTGGAAGGCTCGTGCTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTCGTCGTCAGCCATGATCTCAAAGGTGTTCATGTTCAGTGTTCACTCCGCATGGCATCAACCACAGCTGTGTACACAAGTGCAGATTTATTCATGCTTTTGCAAGTCAGTACATCAACTCAAGGACCAAAACTTGTTGGAGATTCACAACCTTATGGGGTCCTTCCAGTCTTCCACTATAATTTGTATGGAGTCAATTTCCATTTATTCTTTACCAGTTTGGCGAGTGGCTAA

Protein sequence

MGIVRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLRLQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKNLKKDLTVLVVSHDLKGVHVQCSLRMASTTAVYTSADLFMLLQVSTSTQGPKLVGDSQPYGVLPVFHYNLYGVNFHLFFTSLASG

Homology

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BLAST of Lsi03G004090 vs. ExPASy Swiss-Prot
Match: Q8LEF6 (ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI11 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 5.7e-83
Identity = 150/201 (74.63%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRD+ YRPPGT+ ++LN VNFSLREKSFGLIFG+SGSGKTTLLQLLAGL+KPTSGSI +Q
Sbjct: 53  VRDVCYRPPGTQLNILNGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQ 112

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
            Y  DG+P      L  E+VGIVFQFPER+F+ D+VLDE+TFGWPRQ+   +LKE L   
Sbjct: 113 GYGDDGQPKADPDLLPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSN 172

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+A NWVGL+ I LDKDP  LSGGYKRRLALAIQLVQ PDLLILDEPLAGLDWKARADV
Sbjct: 173 LQRAFNWVGLDSIPLDKDPQLLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADV 232

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
            KLLK+LKK+LT+LVVSHDL+
Sbjct: 233 AKLLKHLKKELTLLVVSHDLR 253

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BLAST of Lsi03G004090 vs. ExPASy Swiss-Prot
Match: A3DJK5 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.0e-33
Identity = 79/194 (40.72%), Postives = 120/194 (61.86%), Query Frame = 0


Query: 15  EHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYDKDGKPCQS 74
           E   L+ +N S+    F  I G +GSGK+TL+Q   GL KPTSGS+Y+   +  G+  + 
Sbjct: 19  EKKALDNINLSIETGEFVGIIGHTGSGKSTLVQHFNGLLKPTSGSVYINGEELTGQRAKE 78

Query: 75  SQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLRLQKAINWVGLN 134
            +    ++VGIVFQ+PE     ++V  ++ FG  R+  +   K+ +  +++K I  VGL+
Sbjct: 79  LK----KQVGIVFQYPEHQLFEETVYKDIAFGLVRRGEE---KDEIYRKVRKTIRLVGLS 138

Query: 135 GIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKNLKKD- 194
              LDK P  LSGG KRR+A+A  LV  P +L+LDEP AGLD K R ++ +L+ NL K+ 
Sbjct: 139 EDILDKSPFELSGGQKRRVAMAGILVLEPSILVLDEPAAGLDPKGREEIFELVSNLHKNN 198

Query: 195 -LTVLVVSHDLKGV 207
            +TV++VSH ++ V
Sbjct: 199 KMTVILVSHSMEDV 205

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BLAST of Lsi03G004090 vs. ExPASy Swiss-Prot
Match: Q97EK9 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.0e-31
Identity = 81/209 (38.76%), Postives = 126/209 (60.29%), Query Frame = 0


Query: 4   VRDLSYR-PPGT--EHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSI 63
           + +L+Y   PGT  E   L+ VN ++ +  F +  G +GSGK+TL+Q + GL KPTSGSI
Sbjct: 5   IENLTYTYMPGTPFEKKALDNVNITIEDGEFAVFIGHTGSGKSTLIQQINGLLKPTSGSI 64

Query: 64  YVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENL 123
           ++   D   K  + +     ++VG+VFQ+PE     +++  ++ FG PR       +E +
Sbjct: 65  FIDDVDITDKSVKLND--IRKKVGLVFQYPEYQLFEETIEKDIAFG-PRNMG--LSEEEV 124

Query: 124 GLRLQKAINWVGLN-GIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKA 183
             R++KA+  VGL      DK P  LSGG KRR+A+A  +   P +LILDEP AGLD K 
Sbjct: 125 STRVKKAMKMVGLEYNDFKDKSPFELSGGQKRRVAIAGVVAMEPKVLILDEPTAGLDPKG 184

Query: 184 RADVVKLLKNLKKD--LTVLVVSHDLKGV 207
           R D++  +K L+K+  +T+++VSH ++ V
Sbjct: 185 RDDILYEIKKLQKEYKMTIILVSHSMEDV 208

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BLAST of Lsi03G004090 vs. ExPASy Swiss-Prot
Match: A0PXX8 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium novyi (strain NT) OX=386415 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.1e-29
Identity = 78/207 (37.68%), Postives = 124/207 (59.90%), Query Frame = 0


Query: 12  PGT--EHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYDKDG 71
           PG+  E   L+ VN S+ +  F  + G +GSGK+TL+Q + GL K +SG+I +   D   
Sbjct: 14  PGSPFERKALDNVNISIEDGEFVALIGHTGSGKSTLIQHINGLLKASSGNIIIDGVDITS 73

Query: 72  KPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGL------- 131
           +  + S+    ++VG+VFQ+PE     +++  ++ FG           +NLGL       
Sbjct: 74  EKVKLSE--IRKKVGLVFQYPEYQLFEETIEKDIAFG----------PKNLGLNDEQVSK 133

Query: 132 RLQKAINWVGLN-GIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARA 191
           R++KA+N VGL+  +  DK P  LSGG KRR+A+A  +   P +LILDEP AGLD K R 
Sbjct: 134 RVKKAMNIVGLDYDVYKDKSPFDLSGGQKRRVAIAGVVAMEPKVLILDEPAAGLDPKGRE 193

Query: 192 DVVKLLKNLKKD--LTVLVVSHDLKGV 207
           D+++ +K LK++  +T+++VSH ++ V
Sbjct: 194 DILEKVKQLKEEYNMTIILVSHSMEDV 208

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BLAST of Lsi03G004090 vs. ExPASy Swiss-Prot
Match: Q890R3 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 72/195 (36.92%), Postives = 119/195 (61.03%), Query Frame = 0


Query: 15  EHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYDKDGKPCQS 74
           E   ++ VN  ++   F  + G +GSGK+TL+Q + GL KP SG I +   D   K  + 
Sbjct: 19  EKKAIDDVNLEIKNGEFIALIGHTGSGKSTLIQHINGLLKPHSGRIIIDDIDITKKEVKM 78

Query: 75  SQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLRLQKAINWVGLN 134
           S+    ++VG+VFQ+PE     +++  ++ FG P+  +    +E +  R+++A+N VGL+
Sbjct: 79  SE--IRKKVGLVFQYPEYQLFEETIEKDIAFG-PKNLN--LSEEEINKRIKRAMNIVGLD 138

Query: 135 GIAL-DKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKNLKKD 194
                DK P  LSGG KRR+A+A  +   P++LILDEP AGLD K R +++  +K+L K+
Sbjct: 139 YEKYRDKSPFELSGGQKRRVAIAGVVAMEPEVLILDEPTAGLDPKGRDEILGEIKDLHKE 198

Query: 195 --LTVLVVSHDLKGV 207
             +T+++VSH ++ V
Sbjct: 199 YNMTIILVSHSMEDV 208

[Close]

BLAST of Lsi03G004090 vs. ExPASy TrEMBL
Match: A0A1S3B2P1 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485466 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 9.3e-105
Identity = 191/201 (95.02%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFG SGSGKTTLLQLLAGLSKPTSGSI VQ
Sbjct: 48  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQLLAGLSKPTSGSICVQ 107

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWPRQRSDF LKENL ++
Sbjct: 108 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMK 167

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKAR DV
Sbjct: 168 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 227

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKKDLTVL+VSHDLK
Sbjct: 228 VKLLKNLKKDLTVLIVSHDLK 248

[Close]

BLAST of Lsi03G004090 vs. ExPASy TrEMBL
Match: A0A5D3BSR8 (ABC transporter I family member 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00210 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 9.3e-105
Identity = 191/201 (95.02%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFG SGSGKTTLLQLLAGLSKPTSGSI VQ
Sbjct: 48  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQLLAGLSKPTSGSICVQ 107

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWPRQRSDF LKENL ++
Sbjct: 108 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMK 167

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKAR DV
Sbjct: 168 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 227

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKKDLTVL+VSHDLK
Sbjct: 228 VKLLKNLKKDLTVLIVSHDLK 248

[Close]

BLAST of Lsi03G004090 vs. ExPASy TrEMBL
Match: A0A0A0LMK4 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G405060 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.1e-104
Identity = 192/201 (95.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSI VQ
Sbjct: 49  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSICVQ 108

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWPRQRSD  LKENL LR
Sbjct: 109 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDSDLKENLALR 168

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKAR DV
Sbjct: 169 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 228

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKK+LTVL+VSHDLK
Sbjct: 229 VKLLKNLKKELTVLIVSHDLK 249

[Close]

BLAST of Lsi03G004090 vs. ExPASy TrEMBL
Match: A0A6J1BYE6 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006715 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.9e-102
Identity = 186/201 (92.54%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRDLSYRPPGTE +LL+AVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIY Q
Sbjct: 49  VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 108

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KYDK+GKPCQSSQPL+PERVGIVFQFPERYF+TDSVLDEVTFGWPRQ+ DF LKE L LR
Sbjct: 109 KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 168

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLL+LDEPLAGLDWKARAD+
Sbjct: 169 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 228

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKKDLTVLVVSHDLK
Sbjct: 229 VKLLKNLKKDLTVLVVSHDLK 249

[Close]

BLAST of Lsi03G004090 vs. ExPASy TrEMBL
Match: A0A6J1FMX1 (ABC transporter I family member 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445651 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.2e-99
Identity = 182/201 (90.55%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRDLSYRPPGTEHSLL+ VNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ
Sbjct: 50  VRDLSYRPPGTEHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 109

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KY KD KPCQSSQPLT +RVGIVFQFPERYF+ D+VLDEVTFGWPRQ+SD  LK++L LR
Sbjct: 110 KYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALR 169

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLL+LDEPLAGLDWKARADV
Sbjct: 170 LQRAINWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADV 229

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKKDLTVLVVSHDLK
Sbjct: 230 VKLLKNLKKDLTVLVVSHDLK 250

[Close]

BLAST of Lsi03G004090 vs. NCBI nr
Match: XP_038886122.1 (ABC transporter I family member 11, chloroplastic [Benincasa hispida])

HSP 1 Score: 394.4 bits (1012), Expect = 7.8e-106
Identity = 193/201 (96.02%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGL+KPTSGSIYVQ
Sbjct: 49  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLNKPTSGSIYVQ 108

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPR++SDFRLKENL LR
Sbjct: 109 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRKKSDFRLKENLSLR 168

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGIALDKDP+SLSGGYKRRLALAIQLV+IPDLLILDEPLAGLDWKAR DV
Sbjct: 169 LQRAINWVGLNGIALDKDPYSLSGGYKRRLALAIQLVEIPDLLILDEPLAGLDWKARTDV 228

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKKDLTVLVVSHDLK
Sbjct: 229 VKLLKNLKKDLTVLVVSHDLK 249

[Close]

BLAST of Lsi03G004090 vs. NCBI nr
Match: XP_008441309.1 (PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis melo] >XP_008441310.1 PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis melo] >TYK02723.1 ABC transporter I family member 11 [Cucumis melo var. makuwa])

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-104
Identity = 191/201 (95.02%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFG SGSGKTTLLQLLAGLSKPTSGSI VQ
Sbjct: 48  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQLLAGLSKPTSGSICVQ 107

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWPRQRSDF LKENL ++
Sbjct: 108 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMK 167

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKAR DV
Sbjct: 168 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 227

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKKDLTVL+VSHDLK
Sbjct: 228 VKLLKNLKKDLTVLIVSHDLK 248

[Close]

BLAST of Lsi03G004090 vs. NCBI nr
Match: XP_004138625.1 (ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis sativus] >KGN63155.1 hypothetical protein Csa_021846 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 4.3e-104
Identity = 192/201 (95.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSI VQ
Sbjct: 49  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSICVQ 108

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWPRQRSD  LKENL LR
Sbjct: 109 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDSDLKENLALR 168

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKAR DV
Sbjct: 169 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 228

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKK+LTVL+VSHDLK
Sbjct: 229 VKLLKNLKKELTVLIVSHDLK 249

[Close]

BLAST of Lsi03G004090 vs. NCBI nr
Match: XP_031737255.1 (ABC transporter I family member 11, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 1.2e-103
Identity = 191/200 (95.50%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 5   RDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQK 64
           RDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSI VQK
Sbjct: 29  RDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSICVQK 88

Query: 65  YDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLRL 124
           YDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWPRQRSD  LKENL LRL
Sbjct: 89  YDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDSDLKENLALRL 148

Query: 125 QKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVV 184
           Q+AINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKAR DVV
Sbjct: 149 QRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDVV 208

Query: 185 KLLKNLKKDLTVLVVSHDLK 205
           KLLKNLKK+LTVL+VSHDLK
Sbjct: 209 KLLKNLKKELTVLIVSHDLK 228

[Close]

BLAST of Lsi03G004090 vs. NCBI nr
Match: XP_011649948.1 (ABC transporter I family member 11, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 2.1e-103
Identity = 190/201 (94.53%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           ++DLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSI VQ
Sbjct: 49  LKDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSICVQ 108

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
           KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVL+EVTFGWPRQRSD  LKENL LR
Sbjct: 109 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDSDLKENLALR 168

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+AINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKAR DV
Sbjct: 169 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 228

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
           VKLLKNLKK+LTVL+VSHDLK
Sbjct: 229 VKLLKNLKKELTVLIVSHDLK 249

[Close]

BLAST of Lsi03G004090 vs. TAIR 10
Match: AT5G14100.1 (non-intrinsic ABC protein 14 )

HSP 1 Score: 308.9 bits (790), Expect = 4.0e-84
Identity = 150/201 (74.63%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 4   VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 63
           VRD+ YRPPGT+ ++LN VNFSLREKSFGLIFG+SGSGKTTLLQLLAGL+KPTSGSI +Q
Sbjct: 53  VRDVCYRPPGTQLNILNGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQ 112

Query: 64  KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLR 123
            Y  DG+P      L  E+VGIVFQFPER+F+ D+VLDE+TFGWPRQ+   +LKE L   
Sbjct: 113 GYGDDGQPKADPDLLPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSN 172

Query: 124 LQKAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADV 183
           LQ+A NWVGL+ I LDKDP  LSGGYKRRLALAIQLVQ PDLLILDEPLAGLDWKARADV
Sbjct: 173 LQRAFNWVGLDSIPLDKDPQLLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADV 232

Query: 184 VKLLKNLKKDLTVLVVSHDLK 205
            KLLK+LKK+LT+LVVSHDL+
Sbjct: 233 AKLLKHLKKELTLLVVSHDLR 253

[Close]

BLAST of Lsi03G004090 vs. TAIR 10
Match: AT4G33460.1 (ABC transporter family protein )

HSP 1 Score: 83.6 bits (205), Expect = 2.7e-16
Identity = 60/196 (30.61%), Postives = 101/196 (51.53%), Query Frame = 0


Query: 13  GTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYDKDGKPC 72
           G    +L   +F +      +I G +G GK+TLL++LAG+  P+SG+++V+K        
Sbjct: 54  GISVPILRDCSFRIPSGQLWMILGPNGCGKSTLLKILAGVVNPSSGTVFVEK-------- 113

Query: 73  QSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLRLQKAINWVG 132
                  P+    VFQ P+   +  +V  +V FG  +       +E +  R+ KA+  VG
Sbjct: 114 -------PK--NFVFQNPDHQVVMPTVEADVAFGLGKYHD--MNQEEVKSRVIKALEAVG 173

Query: 133 LNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKNL-- 192
           +    + +   +LSGG K+R+A+A  L +   +L+LDE    LD   +  V+K +K+L  
Sbjct: 174 MRDY-MQRPIQTLSGGQKQRIAIAGALAEACKVLLLDELTTFLDESDQMGVIKAVKDLIN 229

Query: 193 --KKDLTVLVVSHDLK 205
             K D+T L V+H L+
Sbjct: 234 AKKGDVTALWVTHRLE 229

[Close]

BLAST of Lsi03G004090 vs. TAIR 10
Match: AT3G47740.1 (ABC2 homolog 2 )

HSP 1 Score: 82.8 bits (203), Expect = 4.7e-16
Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = 0


Query: 31  FGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYD--KDGKPCQSSQPLTPERVGIVFQ 90
           FG++ G +G+GKT+ + ++ GL KPTSG+ +VQ  D  KD     +S  + P+       
Sbjct: 644 FGML-GPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKDMDRVYTSMGVCPQH------ 703

Query: 91  FPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLRLQKAI----NWVGL-NGIALDKDPH 150
                     +L E   G        RLK   G+ L +A+      V L +G   DK   
Sbjct: 704 ---------DLLWETLTGREHLLFYGRLKNLKGVDLNQAVEESLRSVNLFHGGVADKPAG 763

Query: 151 SLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKNLKKDLTVLVVSHDL 210
             SGG KRRL++AI L+  P ++ +DEP  GLD  +R ++  ++KN K+   +++ +H +
Sbjct: 764 KYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKNAKRHTAIILTTHSM 814

[Close]

BLAST of Lsi03G004090 vs. TAIR 10
Match: AT5G03910.1 (ABC2 homolog 12 )

HSP 1 Score: 79.0 bits (193), Expect = 6.8e-15
Identity = 66/209 (31.58%), Postives = 106/209 (50.72%), Query Frame = 0


Query: 6   DLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKY 65
           D+S++       +L+ +N  ++      + G SG GKTTL++LL  L +P+SGSI + K 
Sbjct: 400 DISFKYDENMLPVLDGLNLHIKAGETVALVGPSGGGKTTLIKLLLRLYEPSSGSIIIDKI 459

Query: 66  DKDGKPCQSSQPLTPERVGIVFQFPERY--FITDSV-LDEVTFGWPRQRSDFRLK----E 125
           D      +S +    + VG+V Q    +   I D++   ++T G   +R +   K    +
Sbjct: 460 DIKDIKLESLR----KHVGLVSQDTTLFSGTIADNIGYRDLTTGIDMKRVELAAKTANAD 519

Query: 126 NLGLRLQKAIN-WVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDW 185
                L +  N  VG  G        SLSGG K+RLA+A  L Q   +LILDE  + LD 
Sbjct: 520 EFIRNLPEGYNTGVGPRG-------SSLSGGQKQRLAIARALYQKSSILILDEATSALDS 579

Query: 186 KARADVVKLLKNLKKDLTVLVVSHDLKGV 207
            +   V + L+ + +D TV+V++H L+ V
Sbjct: 580 LSELLVREALERVMQDHTVIVIAHRLETV 597

[Close]

BLAST of Lsi03G004090 vs. TAIR 10
Match: AT5G61700.1 (ABC2 homolog 16 )

HSP 1 Score: 79.0 bits (193), Expect = 6.8e-15
Identity = 56/188 (29.79%), Postives = 93/188 (49.47%), Query Frame = 0


Query: 31  FGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYD--KDGKPCQSSQPLTPERVGIVFQ 90
           FG++ G +G+GKT+ + ++ GL KP+SG+  VQ  D  KD     +S  + P+       
Sbjct: 600 FGML-GPNGAGKTSFISMMTGLLKPSSGTALVQGLDICKDMNKVYTSMGVCPQH------ 659

Query: 91  FPERYFITDSVLDEVTFGWPRQRSDFRLKENLGLRLQKAINWVGLNGIAL------DKDP 150
                     +L E   G        RLK   G  L +A+    L  ++L      DK  
Sbjct: 660 ---------DLLWETLTGREHLLFYGRLKNIKGSDLTQAVE-ESLKSVSLYDGGVGDKPA 719

Query: 151 HSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKNLKKDLTVLVVSHD 210
            + SGG KRRL++AI L+  P ++ LDEP  GLD  +R ++  ++K  K++  +++ +H 
Sbjct: 720 GNYSGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNLWNVIKRAKQNTAIILTTHS 770

The following BLAST results are available for this feature:

BLAST of Lsi03G004090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEF6	5.7e-83	74.63	ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
A3DJK5	7.0e-33	40.72	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Hungateiclostrid...	[more]
Q97EK9	5.0e-31	38.76	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium acet...	[more]
A0PXX8	6.1e-29	37.68	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium novy...	[more]
Q890R3	1.5e-27	36.92	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium teta...	[more]

BLAST of Lsi03G004090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2P1	9.3e-105	95.02	ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucumis melo OX=...	[more]
A0A5D3BSR8	9.3e-105	95.02	ABC transporter I family member 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0LMK4	2.1e-104	95.52	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G40...	[more]
A0A6J1BYE6	1.9e-102	92.54	ABC transporter I family member 11, chloroplastic isoform X1 OS=Momordica charan...	[more]
A0A6J1FMX1	1.2e-99	90.55	ABC transporter I family member 11, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Lsi03G004090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886122.1	7.8e-106	96.02	ABC transporter I family member 11, chloroplastic [Benincasa hispida]	[more]
XP_008441309.1	1.9e-104	95.02	PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis...	[more]
XP_004138625.1	4.3e-104	95.52	ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis sativus] >...	[more]
XP_031737255.1	1.2e-103	95.50	ABC transporter I family member 11, chloroplastic isoform X3 [Cucumis sativus]	[more]
XP_011649948.1	2.1e-103	94.53	ABC transporter I family member 11, chloroplastic isoform X2 [Cucumis sativus]	[more]

BLAST of Lsi03G004090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14100.1	4.0e-84	74.63	non-intrinsic ABC protein 14	[more]
AT4G33460.1	2.7e-16	30.61	ABC transporter family protein	[more]
AT3G47740.1	4.7e-16	31.02	ABC2 homolog 2	[more]
AT5G03910.1	6.8e-15	31.58	ABC2 homolog 12	[more]
AT5G61700.1	6.8e-15	29.79	ABC2 homolog 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 28..226 e-value: 1.7E-6 score: 37.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..227 e-value: 3.7E-49 score: 169.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..209
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 19..172 e-value: 3.2E-24 score: 86.0
IPR003439	ABC transporter-like, ATP-binding domain	PROSITE	PS50893	ABC_TRANSPORTER_2	coord: 4..242 score: 18.400822
None	No IPR available	PANTHER	PTHR43553	HEAVY METAL TRANSPORTER	coord: 4..206
None	No IPR available	PANTHER	PTHR43553:SF1	ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC	coord: 4..206
IPR015856	ABC transporter, CbiO/EcfA subunit	CDD	cd03225	ABC_cobalt_CbiO_domain1	coord: 4..206 e-value: 1.55151E-56 score: 178.815

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G004090.1	Lsi03G004090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0055076	transition metal ion homeostasis
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0042626	ATPase-coupled transmembrane transporter activity
molecular_function	GO:0005524	ATP binding