Lsi03G003600 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G003600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	thylakoid lumenal 15 kDa protein 1, chloroplastic
Location	chr03: 4254165 .. 4256704 (-)
RNA-Seq Expression	Lsi03G003600
Synteny	Lsi03G003600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCAATTCGAAAAACGCACAAAAAAAAAAAAAAAAAAAAACAATTCTGGGCTGAATTGCAGCTTCAGGAAATGGCTCTGCTCAACGCTTCGTTATGTTGTTCCACTTCCAGATTTCCTTCCAGACCTCACATTCCTCTTCCTCCCTCCATTTCCGCCCATTCTACGCCTCAGGTAAACTCCCCCCCTCCATTTCCACTCCCAATTTCTTCTCCTTTCTTCTCAAATCCTGTGATTTTAACCACAATATGAAGGTATTCAACCAACAACTGGAAGCTACGCGGAATTTGGTCCTTTCCGTCGGAGAATCCGCCTCAAAAACCACCTTCCTCGCTTTCCTTTCCGCCTCTTTGTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGTTAATTTCTGGATGATAATTTATTGTTATATCTGTATGTATTGTATGATTGATTGATTTTTGGTGAACGGATTCAATTTCGTAATTAGGGTGGAGGCCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACGTTAATCAAGCAAGATTTCAAAACGGTTTCAACTAAATCCACTATTTTAAATGTTGTACATGTACTAATACTACAGTAATATGTGTTTGTGACATTTGCTTTATGTTTCTTCTTGACTAGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTCGATGCTGACTTAACAGGTTTAAGTAATTTTATGAACTGCAAAATCATCTTCAGAATCTTCTCTTGCGACATGGAAAACAAAATCCAATTAAAACTGACTTCAATTCTTTCTTTCTTTGCCTAATTGTTAGGGGCGGATCTTTCAGATGCTGATCTCAGAGGTGCAGACTTTTCTTTGGCCAATGTTACCAAGGTGATGATTACTTGATACGTTTACAATTAAGTGCTTTCTTATTTAATCTTTAATTTGCCCCTTCTCAAATTTTCAAATTTGAAAGATTATATATATATAAAGTTAGGAGGTCAACTTTTGCAATCTCATTCTTGAATGTTCAAAAATTTGATGAGGTCAAGAGAAATATGATAGGAAACTACTTTGCAAAAAGTATTGATATGATACAATAACCTTGAACTGTGTTTGCAGTTTTGATCTGAGATTTTACATTCAAATTTTGTGCTTTGATGTTAGAAGACTGTGAAGTTCTAACTTTATCCTGAATGGTTGGTTTTTTCTGCTTTGGGCAGGCAAATTTAAGCAATGCCAACTTAGAAGGTGCACTCGCCACAGGAAATACTTCTTTCCGTGGATCAACAATAAACGGAGCTGGTATGTAAACCCAACATTTATGTATCTTTTAGTATTTCACTGGGGGTCCTCTCATCTCCAAAATTGTTTTAGATGCCATAATACATTAACATAGATTGTTATTCCAACCTCTCTATTTTTCATAAATTTGAAATTCTACACCTTTGCATTTAGCTGAAACTCATTTTTGTCAACAATGCACTTAGCTGAAAAAAGAGTTGTAGGAAATTGTAATTGAAGTAACAAGGGATGTGATTTTCTTCAAGAGATTATGGAAAAACTAAAGATAAAGTGGTGCTACGAGCCTACGAAGAAATACTTATGCATAATTTACCTCATAATGTCAGACTTCACTGACGTGCCTTTGAGAGAGGATCAGCGGGAGTACCTTTGCAAAGTTGCAGATGGGTAAAGTCAAATTCTTCTGTTTCTTAGGTTGACTGTAAATGATTCATGATAAACAAACTAGGAAACTTAGTCATTTTTGTTTACAGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCTTGCTCTGCGATTGAGACTCGAATTATATGTCAAGCTCTTGAGGTACAAGAAATCGTACAGATCAACTTAAAAATGTATAAAGTTTTTAGTAACCATATCAGTATCCAATCCAATGAGTTCAATTTTGTCATTCATCTGATAATGTCTCCTATCACGTGGTTTGTTGATATCATAAAGCTTATCGTAAGGGCTGATTCAAAGAATTAGAACACGTTGGATTTCTTTGCTATTGAATTCAACATCCAGGTCCTTTACAAACAAGGCCCTCTTAAGAAAATTAAACTGATTTTACAAGGCATTGGATTTGATGTACTGGAACCATAACTAGAAACCACTAGGATTTTCCATCATTACCCAGTTGGTAATTTTCACTCCAACCCACTAATAGCAGGAGCAGAAGTTGTAAAGCTCCCACTACAAAGTGCACATATTTAAAACGATTGGCTTCCCTCCATCCAATTTATTTATTTATTTATTTATTTTTGTTTATTCCACTCCAGAAAAATTGTTGTCTTTTCCAACTTTAATAATGTTGCTGATATTGTCTAACCCCACTCAGGAGGTGTTTATTAGAATATGGCTCTACTATAGTAATCTCTGTTACAGTCTTACCAACCAGATTATCATCGTCCTCAAAAACTGGTTCTGTTGAATATACTCATAATTTTCTGTAGAACTGTGATATTTACAAGAGAACAAATCAG

mRNA sequence

ATCCAATTCGAAAAACGCACAAAAAAAAAAAAAAAAAAAAACAATTCTGGGCTGAATTGCAGCTTCAGGAAATGGCTCTGCTCAACGCTTCGTTATGTTGTTCCACTTCCAGATTTCCTTCCAGACCTCACATTCCTCTTCCTCCCTCCATTTCCGCCCATTCTACGCCTCAGGTATTCAACCAACAACTGGAAGCTACGCGGAATTTGGTCCTTTCCGTCGGAGAATCCGCCTCAAAAACCACCTTCCTCGCTTTCCTTTCCGCCTCTTTGTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGGTGGAGGCCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACGTTAATCAAGCAAGATTTCAAAACGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTCGATGCTGACTTAACAGGTTTAAGGGCGGATCTTTCAGATGCTGATCTCAGAGGTGCAGACTTTTCTTTGGCCAATGCAAATTTAAGCAATGCCAACTTAGAAGGTGCACTCGCCACAGGAAATACTTCTTTCCGTGGATCAACAATAAACGGAGCTGACTTCACTGACGTGCCTTTGAGAGAGGATCAGCGGGAGTACCTTTGCAAAGTTGCAGATGGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCTTGCTCTGCGATTGAGACTCGAATTATATGTCAAGCTCTTGAGGTACAAGAAATCGTACAGATCAACTTAAAAATGTATAAAGTTTTTAGTAACCATATCAGTATCCAATCCAATGAGTTCAATTTTGTCATTCATCTGATAATGTCTCCTATCACGTGGTTTGTTGATATCATAAAGCTTATCGTAAGGGCTGATTCAAAGAATTAGAACACGTTGGATTTCTTTGCTATTGAATTCAACATCCAGGTCCTTTACAAACAAGGCCCTCTTAAGAAAATTAAACTGATTTTACAAGGCATTGGATTTGATGTACTGGAACCATAACTAGAAACCACTAGGATTTTCCATCATTACCCAGTTGGTAATTTTCACTCCAACCCACTAATAGCAGGAGCAGAAGTTGTAAAGCTCCCACTACAAAGTGCACATATTTAAAACGATTGGCTTCCCTCCATCCAATTTATTTATTTATTTATTTATTTTTGTTTATTCCACTCCAGAAAAATTGTTGTCTTTTCCAACTTTAATAATGTTGCTGATATTGTCTAACCCCACTCAGGAGGTGTTTATTAGAATATGGCTCTACTATAGTAATCTCTGTTACAGTCTTACCAACCAGATTATCATCGTCCTCAAAAACTGGTTCTGTTGAATATACTCATAATTTTCTGTAGAACTGTGATATTTACAAGAGAACAAATCAG

Coding sequence (CDS)

ATGGCTCTGCTCAACGCTTCGTTATGTTGTTCCACTTCCAGATTTCCTTCCAGACCTCACATTCCTCTTCCTCCCTCCATTTCCGCCCATTCTACGCCTCAGGTATTCAACCAACAACTGGAAGCTACGCGGAATTTGGTCCTTTCCGTCGGAGAATCCGCCTCAAAAACCACCTTCCTCGCTTTCCTTTCCGCCTCTTTGTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGGTGGAGGCCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACGTTAATCAAGCAAGATTTCAAAACGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTCGATGCTGACTTAACAGGTTTAAGGGCGGATCTTTCAGATGCTGATCTCAGAGGTGCAGACTTTTCTTTGGCCAATGCAAATTTAAGCAATGCCAACTTAGAAGGTGCACTCGCCACAGGAAATACTTCTTTCCGTGGATCAACAATAAACGGAGCTGACTTCACTGACGTGCCTTTGAGAGAGGATCAGCGGGAGTACCTTTGCAAAGTTGCAGATGGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCTTGCTCTGCGATTGA

Protein sequence

MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGLRADLSDADLRGADFSLANANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD

Homology

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BLAST of Lsi03G003600 vs. ExPASy Swiss-Prot
Match: O22160 (Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44920 PE=1 SV=2)

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-73
Identity = 155/226 (68.58%), Postives = 174/226 (76.99%), Query Frame = 0


Query: 3   LLNASL--CCSTSRFPSRPHIPLPPSISAHSTPQVFNQQ------LEATRNLVLSVGESA 62
           L N SL  CC+ S+   +P +  P S S+H   +    Q          R++V S+GE  
Sbjct: 4   LSNVSLFSCCNISQ---KPSLFSPSSRSSHCPIRCSQSQEGKEVVTSPLRSVVWSLGEEV 63

Query: 63  SKTTFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQ 122
           SK +  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI+QDFKTSILRQ
Sbjct: 64  SKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLIRQDFKTSILRQ 123

Query: 123 ANFKGAKLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTS 182
           ANFKGAKLLGASFFDADLTG  ADLS+ADLRGADFSLAN    NL+NANLEGA  TGNTS
Sbjct: 124 ANFKGAKLLGASFFDADLTG--ADLSEADLRGADFSLANVTKVNLTNANLEGATVTGNTS 183

Query: 183 FRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           F+GS I GADFTDVPLR+DQR YLCKVADGVN TTGNATR+TLLC+
Sbjct: 184 FKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224

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BLAST of Lsi03G003600 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.2e-12
Identity = 56/128 (43.75%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 92  LSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGLRADLSDADL-RGADF- 151
           L G+DFSGK+L    F  + L  +NF  A L GA F  + L G  ADL  ADL  G  + 
Sbjct: 54  LIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIG--ADLHGADLTNGLAYL 113

Query: 152 -SLANANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGN 211
            S   A+L+NA L  A+    T F  + I GADF+   L   + + LC  ADGVNP TG 
Sbjct: 114 TSFKGADLTNAVLTEAIMM-RTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGV 173

Query: 212 ATRETLLC 217
           +TRE+L C
Sbjct: 174 STRESLGC 178

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BLAST of Lsi03G003600 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 61/201 (30.35%), Postives = 94/201 (46.77%), Query Frame = 0


Query: 37  NQQLEATRNLVLSVGESASKTTFLAFLSASLFLADPALAFKGGGPYGAGV------TRGQ 96
           N +++ + N       SA   T+   LSA+  +A   +A   G P  A +      TRG+
Sbjct: 45  NLEIKDSSNTREGCCSSAESNTWKRILSAA--MAAAVIASSSGVPAMAELNRFEADTRGE 104

Query: 97  ------------DLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGLRAD 156
                       DLS    S +   + +F ++ +R+++F G+   GA    A     +A+
Sbjct: 105 FGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKA--VAYKAN 164

Query: 157 LSDADLRGA---DFSLANANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYL 216
            S ADL         L  ANL+NA L  ++ T  +   G+ I GADF+D  +   Q++ L
Sbjct: 165 FSGADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQAL 224

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BLAST of Lsi03G003600 vs. ExPASy Swiss-Prot
Match: Q9SE95 (FH protein interacting protein FIP2 OS=Arabidopsis thaliana OX=3702 GN=FIP2 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.8e-06
Identity = 44/113 (38.94%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 88  RGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGLR---ADLSDADL 147
           R  D  G  F    L + +F ++ LR A   G  L  A+  DA L G     ADL  A L
Sbjct: 174 RNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHL 233

Query: 148 RGADFSLANANLSNANLEGALATG----NTSFRGSTINGADFTDVPLREDQRE 194
           + AD  L NANL  ANLEGA   G    N +F+G+ +  A    V LRE   E
Sbjct: 234 QNAD--LTNANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHME 284

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BLAST of Lsi03G003600 vs. ExPASy Swiss-Prot
Match: P73709 (Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1819 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-05
Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 89  GQDLSGKDFSGKTL---------IKQDFK-------TSILRQANFKGAKLLGASFFDADL 148
           G DL G D SG TL         ++Q+ K        +IL +A+ +GA + G     ADL
Sbjct: 114 GADLRGADLSGATLTGACLRGANMRQEKKGYYTNLQAAILGRADLQGANMKGVDLSRADL 173

Query: 149 TGLRADLSDADLRGADFSLANANLSNANLEGALATGNTSFRGSTINGADFTDVPL 188
           +   A+L +A+LR  D  L  A+LS ANL+GAL T + +  G+ +NGAD  +  L
Sbjct: 174 S--YANLKEANLR--DVDLRKADLSYANLKGALLT-DANLSGAKLNGADLQNANL 223

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BLAST of Lsi03G003600 vs. ExPASy TrEMBL
Match: A0A6J1BVJ8 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006104 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.0e-101
Identity = 199/220 (90.45%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLCCSTSR P  PH+ LPPSISAH TP V  QQLEA+RNL+LSVGESASK TFL
Sbjct: 1   MALLNASLCCSTSRIPPAPHLHLPPSISAHPTPPVLKQQLEASRNLILSVGESASKATFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           A LSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  ALLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
           KLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGSTI
Sbjct: 121 KLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTI 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
            GADFTDVPLREDQREYLCKVADGVNPTTGNATR+TLLC+
Sbjct: 181 EGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLLCN 218

[Close]

BLAST of Lsi03G003600 vs. ExPASy TrEMBL
Match: A0A6J1GWM1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457530 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 196/220 (89.09%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLC ST R PSRPH+PLPPS+SA S PQV   Q+EATRN VLSVGESASK +FL
Sbjct: 1   MALLNASLCSSTCRIPSRPHLPLPPSVSAFSNPQVMKHQVEATRNFVLSVGESASKASFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           A +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  ALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
           KLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGS I
Sbjct: 121 KLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSII 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of Lsi03G003600 vs. ExPASy TrEMBL
Match: A0A6J1GU31 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457530 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.6e-99
Identity = 195/220 (88.64%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLC ST R PSRPH+PLPPS+SA S PQ    Q+EATRN VLSVGESASK +FL
Sbjct: 1   MALLNASLCSSTCRIPSRPHLPLPPSVSAFSNPQTMKHQVEATRNFVLSVGESASKASFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           A +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  ALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
           KLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGS I
Sbjct: 121 KLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSII 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of Lsi03G003600 vs. ExPASy TrEMBL
Match: A0A0A0KA71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008700 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.9e-98
Identity = 196/220 (89.09%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLCCST + PSR H+ LPPSIS HST QVFNQQL+ATRN VLS+G+     TFL
Sbjct: 1   MALLNASLCCSTPKIPSRSHLLLPPSISLHSTSQVFNQQLQATRNFVLSLGQ----PTFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           AF+SASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  AFVSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
            LLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGSTI
Sbjct: 121 NLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTI 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD
Sbjct: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 214

[Close]

BLAST of Lsi03G003600 vs. ExPASy TrEMBL
Match: A0A6J1JKT4 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487791 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.8e-98
Identity = 194/220 (88.18%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLC ST R PSR H+PLPPSI A S P+V   Q+EATRN VLSVGESASK +FL
Sbjct: 1   MALLNASLCSSTCRIPSRSHLPLPPSIPAFSNPRVMKHQVEATRNFVLSVGESASKASFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           A +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  ALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
           KLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGS I
Sbjct: 121 KLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSII 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of Lsi03G003600 vs. NCBI nr
Match: XP_022133545.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 199/220 (90.45%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLCCSTSR P  PH+ LPPSISAH TP V  QQLEA+RNL+LSVGESASK TFL
Sbjct: 1   MALLNASLCCSTSRIPPAPHLHLPPSISAHPTPPVLKQQLEASRNLILSVGESASKATFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           A LSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  ALLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
           KLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGSTI
Sbjct: 121 KLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTI 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
            GADFTDVPLREDQREYLCKVADGVNPTTGNATR+TLLC+
Sbjct: 181 EGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLLCN 218

[Close]

BLAST of Lsi03G003600 vs. NCBI nr
Match: XP_022955559.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 372.5 bits (955), Expect = 2.5e-99
Identity = 196/220 (89.09%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLC ST R PSRPH+PLPPS+SA S PQV   Q+EATRN VLSVGESASK +FL
Sbjct: 1   MALLNASLCSSTCRIPSRPHLPLPPSVSAFSNPQVMKHQVEATRNFVLSVGESASKASFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           A +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  ALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
           KLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGS I
Sbjct: 121 KLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSII 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of Lsi03G003600 vs. NCBI nr
Match: XP_023552471.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.1 bits (954), Expect = 3.3e-99
Identity = 197/220 (89.55%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLC ST R PSRPH+PLPPSISA S PQV   Q+EATRN VLSVGESASK +FL
Sbjct: 1   MALLNASLCSSTCRIPSRPHLPLPPSISALSNPQVMKHQVEATRNFVLSVGESASKASFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           A +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  ALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
           KLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGS I
Sbjct: 121 KLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSII 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of Lsi03G003600 vs. NCBI nr
Match: XP_038883977.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 371.3 bits (952), Expect = 5.6e-99
Identity = 203/239 (84.94%), Postives = 211/239 (88.28%), Query Frame = 0


Query: 1   MALLNASLCC-STSRFPSRPHIPLPPSISAHSTP------------------QVFNQQLE 60
           MALLNASLCC STSR PSRPH+PLP S++AHS+P                  +VFNQQLE
Sbjct: 1   MALLNASLCCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 60

Query: 61  ATRNLVLSVGESASKTTFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKT 120
           ATR+LVLS+GESASK +FLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFS KT
Sbjct: 61  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 120

Query: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSN 180
           LIKQDFKTSILRQANFKGAKLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSN
Sbjct: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSN 180

Query: 181 ANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           ANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD
Sbjct: 181 ANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 237

[Close]

BLAST of Lsi03G003600 vs. NCBI nr
Match: XP_022955551.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 370.9 bits (951), Expect = 7.3e-99
Identity = 195/220 (88.64%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MALLNASLCCSTSRFPSRPHIPLPPSISAHSTPQVFNQQLEATRNLVLSVGESASKTTFL 60
           MALLNASLC ST R PSRPH+PLPPS+SA S PQ    Q+EATRN VLSVGESASK +FL
Sbjct: 1   MALLNASLCSSTCRIPSRPHLPLPPSVSAFSNPQTMKHQVEATRNFVLSVGESASKASFL 60

Query: 61  AFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGA 120
           A +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFSGKTLIKQDFKTSILRQANFKGA
Sbjct: 61  ALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGA 120

Query: 121 KLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTSFRGSTI 180
           KLLGASFFDADLTG  ADLSDADLRGADFSLAN   ANLSNANLEGALATGNTSFRGS I
Sbjct: 121 KLLGASFFDADLTG--ADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSII 180

Query: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 NGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]

BLAST of Lsi03G003600 vs. TAIR 10
Match: AT2G44920.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 3.9e-74
Identity = 155/226 (68.58%), Postives = 174/226 (76.99%), Query Frame = 0


Query: 3   LLNASL--CCSTSRFPSRPHIPLPPSISAHSTPQVFNQQ------LEATRNLVLSVGESA 62
           L N SL  CC+ S+   +P +  P S S+H   +    Q          R++V S+GE  
Sbjct: 4   LSNVSLFSCCNISQ---KPSLFSPSSRSSHCPIRCSQSQEGKEVVTSPLRSVVWSLGEEV 63

Query: 63  SKTTFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQ 122
           SK +  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI+QDFKTSILRQ
Sbjct: 64  SKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLIRQDFKTSILRQ 123

Query: 123 ANFKGAKLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTS 182
           ANFKGAKLLGASFFDADLTG  ADLS+ADLRGADFSLAN    NL+NANLEGA  TGNTS
Sbjct: 124 ANFKGAKLLGASFFDADLTG--ADLSEADLRGADFSLANVTKVNLTNANLEGATVTGNTS 183

Query: 183 FRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 218
           F+GS I GADFTDVPLR+DQR YLCKVADGVN TTGNATR+TLLC+
Sbjct: 184 FKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224

[Close]

BLAST of Lsi03G003600 vs. TAIR 10
Match: AT2G44920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-53
Identity = 123/189 (65.08%), Postives = 139/189 (73.54%), Query Frame = 0


Query: 3   LLNASL--CCSTSRFPSRPHIPLPPSISAHSTPQVFNQQ------LEATRNLVLSVGESA 62
           L N SL  CC+ S+   +P +  P S S+H   +    Q          R++V S+GE  
Sbjct: 4   LSNVSLFSCCNISQ---KPSLFSPSSRSSHCPIRCSQSQEGKEVVTSPLRSVVWSLGEEV 63

Query: 63  SKTTFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQ 122
           SK +  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI+QDFKTSILRQ
Sbjct: 64  SKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLIRQDFKTSILRQ 123

Query: 123 ANFKGAKLLGASFFDADLTGLRADLSDADLRGADFSLAN---ANLSNANLEGALATGNTS 181
           ANFKGAKLLGASFFDADLTG  ADLS+ADLRGADFSLAN    NL+NANLEGA  TGNTS
Sbjct: 124 ANFKGAKLLGASFFDADLTG--ADLSEADLRGADFSLANVTKVNLTNANLEGATVTGNTS 183

[Close]

BLAST of Lsi03G003600 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 61/201 (30.35%), Postives = 94/201 (46.77%), Query Frame = 0


Query: 37  NQQLEATRNLVLSVGESASKTTFLAFLSASLFLADPALAFKGGGPYGAGV------TRGQ 96
           N +++ + N       SA   T+   LSA+  +A   +A   G P  A +      TRG+
Sbjct: 45  NLEIKDSSNTREGCCSSAESNTWKRILSAA--MAAAVIASSSGVPAMAELNRFEADTRGE 104

Query: 97  ------------DLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGLRAD 156
                       DLS    S +   + +F ++ +R+++F G+   GA    A     +A+
Sbjct: 105 FGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKA--VAYKAN 164

Query: 157 LSDADLRGA---DFSLANANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYL 216
            S ADL         L  ANL+NA L  ++ T  +   G+ I GADF+D  +   Q++ L
Sbjct: 165 FSGADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQAL 224

[Close]

BLAST of Lsi03G003600 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 48/143 (33.57%), Postives = 72/143 (50.35%), Query Frame = 0


Query: 80  GPYGAGVTR---GQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGLR 139
           G +G G        DLS    S +   + +F ++ +R+++F G+   GA    A     +
Sbjct: 27  GEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKA--VAYK 86

Query: 140 ADLSDADLRGA---DFSLANANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQRE 199
           A+ S ADL         L  ANL+NA L  ++ T  +   G+ I GADF+D  +   Q++
Sbjct: 87  ANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQ 146

Query: 200 YLCKVADGVNPTTGNATRETLLC 217
            LCK A G NP TG  TR++L C
Sbjct: 147 ALCKYATGTNPLTGVDTRKSLGC 166

[Close]

BLAST of Lsi03G003600 vs. TAIR 10
Match: AT5G55000.2 (potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein )

HSP 1 Score: 52.8 bits (125), Expect = 4.1e-07
Identity = 44/113 (38.94%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 88  RGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGLR---ADLSDADL 147
           R  D  G  F    L + +F ++ LR A   G  L  A+  DA L G     ADL  A L
Sbjct: 174 RNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHL 233

Query: 148 RGADFSLANANLSNANLEGALATG----NTSFRGSTINGADFTDVPLREDQRE 194
           + AD  L NANL  ANLEGA   G    N +F+G+ +  A    V LRE   E
Sbjct: 234 QNAD--LTNANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHME 284

The following BLAST results are available for this feature:

BLAST of Lsi03G003600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22160	5.5e-73	68.58	Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
B1WVN5	4.2e-12	43.75	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
Q8H1Q1	2.1e-08	30.35	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SE95	5.8e-06	38.94	FH protein interacting protein FIP2 OS=Arabidopsis thaliana OX=3702 GN=FIP2 PE=1...	[more]
P73709	1.7e-05	37.39	Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]

BLAST of Lsi03G003600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVJ8	5.0e-101	90.45	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Momordica charan...	[more]
A0A6J1GWM1	1.2e-99	89.09	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita moscha...	[more]
A0A6J1GU31	3.6e-99	88.64	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita moscha...	[more]
A0A0A0KA71	3.9e-98	89.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008700 PE=4 SV=1	[more]
A0A6J1JKT4	8.8e-98	88.18	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita maxima...	[more]

BLAST of Lsi03G003600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133545.1	1.0e-100	90.45	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 [Momordica charanti...	[more]
XP_022955559.1	2.5e-99	89.09	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 [Cucurbita moschata...	[more]
XP_023552471.1	3.3e-99	89.55	thylakoid lumenal 15 kDa protein 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038883977.1	5.6e-99	84.94	thylakoid lumenal 15 kDa protein 1, chloroplastic [Benincasa hispida]	[more]
XP_022955551.1	7.3e-99	88.64	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 [Cucurbita moschata...	[more]

BLAST of Lsi03G003600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44920.2	3.9e-74	68.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G44920.1	1.3e-53	65.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.1	1.5e-09	30.35	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	1.5e-09	33.57	Pentapeptide repeat-containing protein	[more]
AT5G55000.2	4.1e-07	38.94	potassium channel tetramerisation domain-containing protein / pentapeptide repea...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 151..184 e-value: 6.7E-4 score: 19.2 coord: 110..150 e-value: 2.0E-8 score: 33.7
None	No IPR available	GENE3D	2.160.20.80		coord: 75..217 e-value: 1.8E-41 score: 142.7
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 87..185
IPR044213	Thylakoid lumenal 15kDa protein 1-like	PANTHER	PTHR47200	THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC	coord: 25..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G003600.1	Lsi03G003600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009534	chloroplast thylakoid