Lsi03G003340 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G003340
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Lectin_legB domain-containing protein
Location	chr03: 3971498 .. 3972421 (-)
RNA-Seq Expression	Lsi03G003340
Synteny	Lsi03G003340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAATTTGTCTTCTCAAATCCTTTTCTCCATTTTCCTCTTCCTATTTCTCCACCCCATTTCCTCTTTAACCCTCCCAAAACAACCCAATTTCGATCCACAAATTTCCCTCATCGGAGACGCCGCTTTCGTCTACAGCGATGCTCACCCACGCGGCGGCGCTTCTTTCGTCAAATTAACCCGCCCCGTTGCTTCCAGCTTTGGCCTTCTTTTGCACAATAAACCCCTAAAGCTTCACGACTCCACTTCGTTTTATACCCATTTCACTTTCTCTGTCTCACCGGACAACGGCGATGGACTCGTTCTTTCACTCTTTCCCCAAGGGGTTTTCCCCGACGAGGTTTCCCCGGAGAAATGGCTTCACAGTATCGAGTTTATTTCTGCCAATGTGAGTAGTGGGTATGTGAAAACAGAGAAGGGGATTCTCCTGCCTAACAATGAGGGAAAATTTACATCGTGGGTCGATTACGATTCGAAAATGGTGGAAATCAGGTTGAGTAAATTTGGGGATTCTAGGCCTTACAATCCGTTATTAGCATACCCAATTGATCTTCCGATTAAATGCGGTGGGAGGGAAGTATTTGTGGGATTAAGCTCGTGGAATAGCAAATCAAGTGAGTGGAGCAGAGTGTTTTCGTGGAGGTTTGGCCTTAGAAATGTCCCTAAATGGATGCATTCTTTGCCGGTGGATCCACGGCGGCGTTCTGATAAACAGGATCATTCTAACCCTTTAACCATTTTGGCTGGGCTGATCTTTGCAACTGGATGTGGTGCGTTAATGGCGTTTTTGGTACTGTTCATGTGGGCAATTGCAGGGAATAGAAATGCCATCTTTGGAGCTGAGCCCCAATCTGTGGATTTTCAATACGAGAAGGTTAGTATAGTAGAGGAAGGATTCAAAGATGTTGAAGGTAGAGGATGA

mRNA sequence

ATGGTTAATTTGTCTTCTCAAATCCTTTTCTCCATTTTCCTCTTCCTATTTCTCCACCCCATTTCCTCTTTAACCCTCCCAAAACAACCCAATTTCGATCCACAAATTTCCCTCATCGGAGACGCCGCTTTCGTCTACAGCGATGCTCACCCACGCGGCGGCGCTTCTTTCGTCAAATTAACCCGCCCCGTTGCTTCCAGCTTTGGCCTTCTTTTGCACAATAAACCCCTAAAGCTTCACGACTCCACTTCGTTTTATACCCATTTCACTTTCTCTGTCTCACCGGACAACGGCGATGGACTCGTTCTTTCACTCTTTCCCCAAGGGGTTTTCCCCGACGAGGTTTCCCCGGAGAAATGGCTTCACAGTATCGAGTTTATTTCTGCCAATGTGAGTAGTGGGTATGTGAAAACAGAGAAGGGGATTCTCCTGCCTAACAATGAGGGAAAATTTACATCGTGGGTCGATTACGATTCGAAAATGGTGGAAATCAGGTTGAGTAAATTTGGGGATTCTAGGCCTTACAATCCGTTATTAGCATACCCAATTGATCTTCCGATTAAATGCGGTGGGAGGGAAGTATTTGTGGGATTAAGCTCGTGGAATAGCAAATCAAGTGAGTGGAGCAGAGTGTTTTCGTGGAGGTTTGGCCTTAGAAATGTCCCTAAATGGATGCATTCTTTGCCGGTGGATCCACGGCGGCGTTCTGATAAACAGGATCATTCTAACCCTTTAACCATTTTGGCTGGGCTGATCTTTGCAACTGGATGTGGTGCGTTAATGGCGTTTTTGGTACTGTTCATGTGGGCAATTGCAGGGAATAGAAATGCCATCTTTGGAGCTGAGCCCCAATCTGTGGATTTTCAATACGAGAAGGTTAGTATAGTAGAGGAAGGATTCAAAGATGTTGAAGGTAGAGGATGA

Coding sequence (CDS)

ATGGTTAATTTGTCTTCTCAAATCCTTTTCTCCATTTTCCTCTTCCTATTTCTCCACCCCATTTCCTCTTTAACCCTCCCAAAACAACCCAATTTCGATCCACAAATTTCCCTCATCGGAGACGCCGCTTTCGTCTACAGCGATGCTCACCCACGCGGCGGCGCTTCTTTCGTCAAATTAACCCGCCCCGTTGCTTCCAGCTTTGGCCTTCTTTTGCACAATAAACCCCTAAAGCTTCACGACTCCACTTCGTTTTATACCCATTTCACTTTCTCTGTCTCACCGGACAACGGCGATGGACTCGTTCTTTCACTCTTTCCCCAAGGGGTTTTCCCCGACGAGGTTTCCCCGGAGAAATGGCTTCACAGTATCGAGTTTATTTCTGCCAATGTGAGTAGTGGGTATGTGAAAACAGAGAAGGGGATTCTCCTGCCTAACAATGAGGGAAAATTTACATCGTGGGTCGATTACGATTCGAAAATGGTGGAAATCAGGTTGAGTAAATTTGGGGATTCTAGGCCTTACAATCCGTTATTAGCATACCCAATTGATCTTCCGATTAAATGCGGTGGGAGGGAAGTATTTGTGGGATTAAGCTCGTGGAATAGCAAATCAAGTGAGTGGAGCAGAGTGTTTTCGTGGAGGTTTGGCCTTAGAAATGTCCCTAAATGGATGCATTCTTTGCCGGTGGATCCACGGCGGCGTTCTGATAAACAGGATCATTCTAACCCTTTAACCATTTTGGCTGGGCTGATCTTTGCAACTGGATGTGGTGCGTTAATGGCGTTTTTGGTACTGTTCATGTGGGCAATTGCAGGGAATAGAAATGCCATCTTTGGAGCTGAGCCCCAATCTGTGGATTTTCAATACGAGAAGGTTAGTATAGTAGAGGAAGGATTCAAAGATGTTGAAGGTAGAGGATGA

Protein sequence

MVNLSSQILFSIFLFLFLHPISSLTLPKQPNFDPQISLIGDAAFVYSDAHPRGGASFVKLTRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSPEKWLHSIEFISANVSSGYVKTEKGILLPNNEGKFTSWVDYDSKMVEIRLSKFGDSRPYNPLLAYPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDPRRRSDKQDHSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQSVDFQYEKVSIVEEGFKDVEGRG

Homology

[Close]

BLAST of Lsi03G003340 vs. ExPASy TrEMBL
Match: A0A5A7TDM9 (L-type lectin-domain containing receptor kinase VIII.1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001810 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.3e-150
Identity = 261/308 (84.74%), Postives = 281/308 (91.23%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSLTLPKQPNFDPQISLIGDAAFVYSDAHPRGGASFVKL 60
           MVN SSQ LFSIFLF FLHPISS T PKQPNFDPQ+SLIGDAAFV +DAH  GGASFVKL
Sbjct: 1   MVNFSSQFLFSIFLFQFLHPISSFTFPKQPNFDPQLSLIGDAAFVSTDAHVNGGASFVKL 60

Query: 61  TRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSPEKW 120
           TRP+ASSFGLLLHNKPL +H+STSF THFTFSVSP+NGDGLVLSLFP G+FPDEVSPEKW
Sbjct: 61  TRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLVLSLFPGGIFPDEVSPEKW 120

Query: 121 LHSIEFISANVSSGYVKTEKGILLPNNEGKFTSWVDYDSKMVEIRLSKFGDSRPYNPLLA 180
           +HSI+F+SAN+S GYVK EKGILLPNN GKFTSWVDYDSKMVEIRL K+G+SRPY+PLL 
Sbjct: 121 VHSIQFVSANLSDGYVKPEKGILLPNNGGKFTSWVDYDSKMVEIRLGKYGESRPYDPLLE 180

Query: 181 YPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDPRRRSDKQD 240
           YPIDL IK GGREVFVGLSSWNSKSSEWSRVFSWRFG+RNV K MHSLPVDPRR SD+QD
Sbjct: 181 YPIDLAIKSGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKLMHSLPVDPRRGSDEQD 240

Query: 241 HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQSVDFQYEKVS-IVEEG 300
           HS PLTI A +IF TGCGALMAFLVLFMWAIAGNRNAIFG EPQSV+FQYEKV+ +VEEG
Sbjct: 241 HSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFGGEPQSVNFQYEKVNVVVEEG 300

Query: 301 FKDVEGRG 308
           FKDVEGRG
Sbjct: 301 FKDVEGRG 308

[Close]

BLAST of Lsi03G003340 vs. ExPASy TrEMBL
Match: A0A0A0KA99 (Lectin_legB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009430 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.3e-150
Identity = 260/308 (84.42%), Postives = 281/308 (91.23%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSLTLPKQPNFDPQISLIGDAAFVYSDAHPRGGASFVKL 60
           MV+ SSQ L SIFLF FLHPISS T PKQPNFDPQ+SLIGDAAFV +DAH  GGASFVKL
Sbjct: 23  MVHFSSQFLLSIFLFQFLHPISSFTFPKQPNFDPQLSLIGDAAFVSTDAHLHGGASFVKL 82

Query: 61  TRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSPEKW 120
           TRP+ASSFGLLLHNKPL +H+STSF THFTFSVSP+NGDGL+LSLFP GVFPDEVSPEKW
Sbjct: 83  TRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLILSLFPGGVFPDEVSPEKW 142

Query: 121 LHSIEFISANVSSGYVKTEKGILLPNNEGKFTSWVDYDSKMVEIRLSKFGDSRPYNPLLA 180
           +HSI+F+SAN+S GYVK E+GILLPNN GKFTSWVDYDSKMVEIRLSK+G+SRPY+ LL 
Sbjct: 143 VHSIQFVSANLSDGYVKPERGILLPNNGGKFTSWVDYDSKMVEIRLSKYGESRPYDSLLE 202

Query: 181 YPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDPRRRSDKQD 240
           YPIDL IKCGGREVFVGLSSWNSKSSEWSRVFSWRFG+RNV KWMHSLPVDPRR SD+Q+
Sbjct: 203 YPIDLGIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKWMHSLPVDPRRGSDEQN 262

Query: 241 HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQSVDFQYEKVS-IVEEG 300
           HS PLTI A +IF TGCGALMAFLVLFMWAIAGNRNAIFG EPQSVDFQYEKVS +VEEG
Sbjct: 263 HSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFGGEPQSVDFQYEKVSVVVEEG 322

Query: 301 FKDVEGRG 308
            KDVEGRG
Sbjct: 323 LKDVEGRG 330

[Close]

BLAST of Lsi03G003340 vs. ExPASy TrEMBL
Match: A0A1S3B3V6 (uncharacterized protein LOC103485717 OS=Cucumis melo OX=3656 GN=LOC103485717 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.3e-150
Identity = 261/308 (84.74%), Postives = 281/308 (91.23%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSLTLPKQPNFDPQISLIGDAAFVYSDAHPRGGASFVKL 60
           MVN SSQ LFSIFLF FLHPISS T PKQPNFDPQ+SLIGDAAFV +DAH  GGASFVKL
Sbjct: 1   MVNFSSQFLFSIFLFQFLHPISSFTFPKQPNFDPQLSLIGDAAFVSTDAHVNGGASFVKL 60

Query: 61  TRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSPEKW 120
           TRP+ASSFGLLLHNKPL +H+STSF THFTFSVSP+NGDGLVLSLFP G+FPDEVSPEKW
Sbjct: 61  TRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLVLSLFPGGIFPDEVSPEKW 120

Query: 121 LHSIEFISANVSSGYVKTEKGILLPNNEGKFTSWVDYDSKMVEIRLSKFGDSRPYNPLLA 180
           +HSI+F+SAN+S GYVK EKGILLPNN GKFTSWVDYDSKMVEIRL K+G+SRPY+PLL 
Sbjct: 121 VHSIQFVSANLSDGYVKPEKGILLPNNGGKFTSWVDYDSKMVEIRLGKYGESRPYDPLLE 180

Query: 181 YPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDPRRRSDKQD 240
           YPIDL IK GGREVFVGLSSWNSKSSEWSRVFSWRFG+RNV K MHSLPVDPRR SD+QD
Sbjct: 181 YPIDLAIKSGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKLMHSLPVDPRRGSDEQD 240

Query: 241 HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQSVDFQYEKVS-IVEEG 300
           HS PLTI A +IF TGCGALMAFLVLFMWAIAGNRNAIFG EPQSV+FQYEKV+ +VEEG
Sbjct: 241 HSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFGGEPQSVNFQYEKVNVVVEEG 300

Query: 301 FKDVEGRG 308
           FKDVEGRG
Sbjct: 301 FKDVEGRG 308

[Close]

BLAST of Lsi03G003340 vs. ExPASy TrEMBL
Match: A0A6J1H9S2 (uncharacterized protein LOC111461824 OS=Cucurbita moschata OX=3662 GN=LOC111461824 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 6.5e-131
Identity = 247/323 (76.47%), Postives = 267/323 (82.66%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSL---TLPKQPNFDPQISLIGDAAFVYSDAHPRGGASF 60
           MV+ SS +LFS+FLF FLHPISS    +LPKQPNFDP I+LIGDA  V  D H   G SF
Sbjct: 1   MVDFSSPLLFSVFLFSFLHPISSFNLRSLPKQPNFDPHIALIGDAVLVDGDGHGDFGDSF 60

Query: 61  VKLTRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSP 120
           VKLTRPVASSFGLLLHNKPLKLH STSFYT FTF+VSPDNGDG+VLSLFP G FPDE+SP
Sbjct: 61  VKLTRPVASSFGLLLHNKPLKLHGSTSFYTQFTFAVSPDNGDGIVLSLFPGGGFPDEISP 120

Query: 121 EKWLHSIEFIS---ANVSSGYVKTEKGILLPNNEGKFTSWVDYD--SKMVEIRLSKFGDS 180
           EKWLH I F+S   +N+S G +K EKGI++PNN GK TSWVDYD  SK VEIRLSKFG+S
Sbjct: 121 EKWLHRIGFVSGNGSNLSGGILKMEKGIVVPNNGGKLTSWVDYDSSSKTVEIRLSKFGES 180

Query: 181 RPYNPLLAYPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDP 240
           RPY+PLLAYPIDL  KC GREVFVGLSS NSKSSEWSRVFSWRFGLRNVPKWMHS+PVDP
Sbjct: 181 RPYDPLLAYPIDLSSKCEGREVFVGLSSGNSKSSEWSRVFSWRFGLRNVPKWMHSMPVDP 240

Query: 241 RRRSDKQD-------HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQS 300
           RR S KQD       H  PLTI+AGLIFATGCGALMAFLVLF+WAIAGNRNAI  AEPQS
Sbjct: 241 RRPSLKQDEEGSQKNHLRPLTIVAGLIFATGCGALMAFLVLFVWAIAGNRNAISVAEPQS 300

Query: 301 VDFQYEKVSIV-EEGFKDVEGRG 308
           VDFQYEKVS+V EEG KD   RG
Sbjct: 301 VDFQYEKVSLVAEEGSKDDGVRG 323

[Close]

BLAST of Lsi03G003340 vs. ExPASy TrEMBL
Match: A0A6J1BW10 (uncharacterized protein LOC111006026 OS=Momordica charantia OX=3673 GN=LOC111006026 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 7.5e-119
Identity = 228/323 (70.59%), Postives = 259/323 (80.19%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSLTLP---KQPNFDPQISLIGDAAFVYSDAHPRGGASF 60
           MVNL S +L  +F + FLHP+SS TLP     PNFDP ++LIGDAA V++DA      SF
Sbjct: 1   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHVALIGDAAVVHADAD--ADDSF 60

Query: 61  VKLTRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSP 120
           VKLTRPVASSFGL+L+ KPL+LHDS+SF T F F VSPDNGDGLVLSLFP G F  E+S 
Sbjct: 61  VKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFP-GSF--ELSR 120

Query: 121 EKWLHSIEFISANVSS---GYVKTEKGILLPNNEGKFTSWVDYD--SKMVEIRLSKFGDS 180
           EKW+H+IEF+SANVS+   GY+KTE+G+L+P   GK TSWVD+D  SKMVEIRLSKFGDS
Sbjct: 121 EKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDS 180

Query: 181 RPYNPLLAYPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDP 240
           RPY+P  AYPIDL  KC G EVFVGLSSWNSK S+WSRVFSWRFGLRN+PK MHSLPVDP
Sbjct: 181 RPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP 240

Query: 241 RRRSDKQ------DHSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQSV 300
           +RRS+KQ      +H  PLTI AGLIFATGCGALMAF+VLFMW IA NRNAIF AEPQSV
Sbjct: 241 QRRSEKQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSV 300

Query: 301 DFQYEKVS--IVEEGFKDVEGRG 308
           DFQY+KVS  +VEEG KDV  RG
Sbjct: 301 DFQYQKVSVVVVEEGLKDVSTRG 318

[Close]

BLAST of Lsi03G003340 vs. NCBI nr
Match: XP_008441637.1 (PREDICTED: uncharacterized protein LOC103485717 [Cucumis melo] >KAA0041522.1 L-type lectin-domain containing receptor kinase VIII.1-like [Cucumis melo var. makuwa] >TYK24395.1 L-type lectin-domain containing receptor kinase VIII.1-like [Cucumis melo var. makuwa])

HSP 1 Score: 540.0 bits (1390), Expect = 1.3e-149
Identity = 261/308 (84.74%), Postives = 281/308 (91.23%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSLTLPKQPNFDPQISLIGDAAFVYSDAHPRGGASFVKL 60
           MVN SSQ LFSIFLF FLHPISS T PKQPNFDPQ+SLIGDAAFV +DAH  GGASFVKL
Sbjct: 1   MVNFSSQFLFSIFLFQFLHPISSFTFPKQPNFDPQLSLIGDAAFVSTDAHVNGGASFVKL 60

Query: 61  TRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSPEKW 120
           TRP+ASSFGLLLHNKPL +H+STSF THFTFSVSP+NGDGLVLSLFP G+FPDEVSPEKW
Sbjct: 61  TRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLVLSLFPGGIFPDEVSPEKW 120

Query: 121 LHSIEFISANVSSGYVKTEKGILLPNNEGKFTSWVDYDSKMVEIRLSKFGDSRPYNPLLA 180
           +HSI+F+SAN+S GYVK EKGILLPNN GKFTSWVDYDSKMVEIRL K+G+SRPY+PLL 
Sbjct: 121 VHSIQFVSANLSDGYVKPEKGILLPNNGGKFTSWVDYDSKMVEIRLGKYGESRPYDPLLE 180

Query: 181 YPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDPRRRSDKQD 240
           YPIDL IK GGREVFVGLSSWNSKSSEWSRVFSWRFG+RNV K MHSLPVDPRR SD+QD
Sbjct: 181 YPIDLAIKSGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKLMHSLPVDPRRGSDEQD 240

Query: 241 HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQSVDFQYEKVS-IVEEG 300
           HS PLTI A +IF TGCGALMAFLVLFMWAIAGNRNAIFG EPQSV+FQYEKV+ +VEEG
Sbjct: 241 HSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFGGEPQSVNFQYEKVNVVVEEG 300

Query: 301 FKDVEGRG 308
           FKDVEGRG
Sbjct: 301 FKDVEGRG 308

[Close]

BLAST of Lsi03G003340 vs. NCBI nr
Match: XP_004138574.2 (uncharacterized protein LOC101219233 [Cucumis sativus] >KGN45764.1 hypothetical protein Csa_005767 [Cucumis sativus])

HSP 1 Score: 540.0 bits (1390), Expect = 1.3e-149
Identity = 260/308 (84.42%), Postives = 281/308 (91.23%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSLTLPKQPNFDPQISLIGDAAFVYSDAHPRGGASFVKL 60
           MV+ SSQ L SIFLF FLHPISS T PKQPNFDPQ+SLIGDAAFV +DAH  GGASFVKL
Sbjct: 23  MVHFSSQFLLSIFLFQFLHPISSFTFPKQPNFDPQLSLIGDAAFVSTDAHLHGGASFVKL 82

Query: 61  TRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSPEKW 120
           TRP+ASSFGLLLHNKPL +H+STSF THFTFSVSP+NGDGL+LSLFP GVFPDEVSPEKW
Sbjct: 83  TRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLILSLFPGGVFPDEVSPEKW 142

Query: 121 LHSIEFISANVSSGYVKTEKGILLPNNEGKFTSWVDYDSKMVEIRLSKFGDSRPYNPLLA 180
           +HSI+F+SAN+S GYVK E+GILLPNN GKFTSWVDYDSKMVEIRLSK+G+SRPY+ LL 
Sbjct: 143 VHSIQFVSANLSDGYVKPERGILLPNNGGKFTSWVDYDSKMVEIRLSKYGESRPYDSLLE 202

Query: 181 YPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDPRRRSDKQD 240
           YPIDL IKCGGREVFVGLSSWNSKSSEWSRVFSWRFG+RNV KWMHSLPVDPRR SD+Q+
Sbjct: 203 YPIDLGIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKWMHSLPVDPRRGSDEQN 262

Query: 241 HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQSVDFQYEKVS-IVEEG 300
           HS PLTI A +IF TGCGALMAFLVLFMWAIAGNRNAIFG EPQSVDFQYEKVS +VEEG
Sbjct: 263 HSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFGGEPQSVDFQYEKVSVVVEEG 322

Query: 301 FKDVEGRG 308
            KDVEGRG
Sbjct: 323 LKDVEGRG 330

[Close]

BLAST of Lsi03G003340 vs. NCBI nr
Match: XP_038885984.1 (uncharacterized protein LOC120076289 [Benincasa hispida])

HSP 1 Score: 535.0 bits (1377), Expect = 4.2e-148
Identity = 262/307 (85.34%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSLTLPKQPNFDPQISLIGDAAFVYSDAHPRGGASFVKL 60
           MVNLSSQILFSIFLF FL PISS T PKQPNFDPQISLIGDAAFV SD   +GGASFVKL
Sbjct: 1   MVNLSSQILFSIFLFQFLRPISSFTFPKQPNFDPQISLIGDAAFVDSDGDAQGGASFVKL 60

Query: 61  TRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSPEKW 120
           TRPVASSFGLLL NKPLK+HDSTSF T FTFSVSPDNGDGLVL L P+GVFP EVSP++W
Sbjct: 61  TRPVASSFGLLLFNKPLKIHDSTSFNTQFTFSVSPDNGDGLVLLLVPEGVFPGEVSPDRW 120

Query: 121 LHSIEFISANVSSGYVKTEKGILLPNNEGKFTSWVDYDSKMVEIRLSKFGDSRPYNPLLA 180
           +HSIEFISAN+S GYVK+EKGILLP+N GKFTSWVDYDSK++EIRLSKFG+SRPY+P L 
Sbjct: 121 VHSIEFISANLSGGYVKSEKGILLPDNGGKFTSWVDYDSKIMEIRLSKFGESRPYDPSLV 180

Query: 181 YPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDPRRRSDKQD 240
           YPIDL IKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNV KWMHSLPVDPR+RSD+Q+
Sbjct: 181 YPIDLSIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVAKWMHSLPVDPRQRSDEQN 240

Query: 241 HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQSVDFQYEKVS-IVEEG 300
           HS+PLTI A LIF TGCG L+AFLVLFMWAIAGNRNAIF AEPQSVDFQYEKVS +VEEG
Sbjct: 241 HSHPLTIFAWLIFGTGCGGLIAFLVLFMWAIAGNRNAIFEAEPQSVDFQYEKVSVVVEEG 300

Query: 301 FKDVEGR 307
           FKDVEGR
Sbjct: 301 FKDVEGR 307

[Close]

BLAST of Lsi03G003340 vs. NCBI nr
Match: XP_022961282.1 (uncharacterized protein LOC111461824 [Cucurbita moschata])

HSP 1 Score: 476.9 bits (1226), Expect = 1.3e-130
Identity = 247/323 (76.47%), Postives = 267/323 (82.66%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSL---TLPKQPNFDPQISLIGDAAFVYSDAHPRGGASF 60
           MV+ SS +LFS+FLF FLHPISS    +LPKQPNFDP I+LIGDA  V  D H   G SF
Sbjct: 1   MVDFSSPLLFSVFLFSFLHPISSFNLRSLPKQPNFDPHIALIGDAVLVDGDGHGDFGDSF 60

Query: 61  VKLTRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSP 120
           VKLTRPVASSFGLLLHNKPLKLH STSFYT FTF+VSPDNGDG+VLSLFP G FPDE+SP
Sbjct: 61  VKLTRPVASSFGLLLHNKPLKLHGSTSFYTQFTFAVSPDNGDGIVLSLFPGGGFPDEISP 120

Query: 121 EKWLHSIEFIS---ANVSSGYVKTEKGILLPNNEGKFTSWVDYD--SKMVEIRLSKFGDS 180
           EKWLH I F+S   +N+S G +K EKGI++PNN GK TSWVDYD  SK VEIRLSKFG+S
Sbjct: 121 EKWLHRIGFVSGNGSNLSGGILKMEKGIVVPNNGGKLTSWVDYDSSSKTVEIRLSKFGES 180

Query: 181 RPYNPLLAYPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDP 240
           RPY+PLLAYPIDL  KC GREVFVGLSS NSKSSEWSRVFSWRFGLRNVPKWMHS+PVDP
Sbjct: 181 RPYDPLLAYPIDLSSKCEGREVFVGLSSGNSKSSEWSRVFSWRFGLRNVPKWMHSMPVDP 240

Query: 241 RRRSDKQD-------HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQS 300
           RR S KQD       H  PLTI+AGLIFATGCGALMAFLVLF+WAIAGNRNAI  AEPQS
Sbjct: 241 RRPSLKQDEEGSQKNHLRPLTIVAGLIFATGCGALMAFLVLFVWAIAGNRNAISVAEPQS 300

Query: 301 VDFQYEKVSIV-EEGFKDVEGRG 308
           VDFQYEKVS+V EEG KD   RG
Sbjct: 301 VDFQYEKVSLVAEEGSKDDGVRG 323

[Close]

BLAST of Lsi03G003340 vs. NCBI nr
Match: XP_023553507.1 (uncharacterized protein LOC111810901 [Cucurbita pepo subsp. pepo] >XP_023553516.1 uncharacterized protein LOC111810901 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.2 bits (1188), Expect = 3.4e-126
Identity = 241/324 (74.38%), Postives = 261/324 (80.56%), Query Frame = 0


Query: 1   MVNLSSQILFSIFLFLFLHPISSL---TLPKQPNFDPQISLIGDAAFVYSDAHPRGGASF 60
           MV+ SS  LFS+F F FLHPISS     LPK+PNFDP I+LIGDA  V  D H   G SF
Sbjct: 1   MVDFSSPFLFSVFFFSFLHPISSFNLRALPKEPNFDPHIALIGDAVLVDGDGHGDCGDSF 60

Query: 61  VKLTRPVASSFGLLLHNKPLKLHDSTSFYTHFTFSVSPDNGDGLVLSLFPQGVFPDEVSP 120
           VKLTRPVASSFGLLLHNKPLKLH STSF T FTF+VSPDNGDGLVLSLF  G FP ++SP
Sbjct: 61  VKLTRPVASSFGLLLHNKPLKLHGSTSFNTQFTFAVSPDNGDGLVLSLFRGGDFPHKISP 120

Query: 121 EKWLHSIEFIS---ANVSSGYVKTEKGILLPNNEGKFTSWVDYDS--KMVEIRLSKFGDS 180
           EKWLH IEF+S   +N++ G +K EKGI++PNN GK TSWVDYDS  K VEIRLSKFG+S
Sbjct: 121 EKWLHRIEFVSGNGSNLNGGILKMEKGIVVPNNGGKLTSWVDYDSSLKTVEIRLSKFGES 180

Query: 181 RPYNPLLAYPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDP 240
           RPY+PLLAYPIDL  KC GR VFVGLSS NSKSSEWSRVFSWRFGLRNVPKWMHS+PVDP
Sbjct: 181 RPYDPLLAYPIDLSSKCEGRGVFVGLSSGNSKSSEWSRVFSWRFGLRNVPKWMHSMPVDP 240

Query: 241 RRRSDKQD-------HSNPLTILAGLIFATGCGALMAFLVLFMWAIAGNRNAIFGAEPQS 300
           RR S KQD       H  PLTI+AGLIFATGCGALMAFLVLF+WAIAGNRNAIF AEPQS
Sbjct: 241 RRPSLKQDEEGSQKNHLRPLTIVAGLIFATGCGALMAFLVLFVWAIAGNRNAIFVAEPQS 300

Query: 301 VDFQYEKVSIV--EEGFKDVEGRG 308
           VDFQYEKVS+V   EG KD   RG
Sbjct: 301 VDFQYEKVSLVVEVEGSKDDSVRG 324

[Close]

BLAST of Lsi03G003340 vs. TAIR 10
Match: AT3G09035.1 (Concanavalin A-like lectin family protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-25
Identity = 89/296 (30.07%), Postives = 147/296 (49.66%), Query Frame = 0


Query: 28  KQPNFDPQISLIGDAAFVYSDAHPRGGASFVKLTRPVASSFGLLLHNKPLKL-----HDS 87
           K P+FD +++L GD+  V         +S ++LT  V  S G +++ KP+ L      +S
Sbjct: 36  KSPSFDKRVALFGDSKLV-------NDSSLIQLTDSVTRSVGRVVYKKPINLFKGKQRNS 95

Query: 88  TSFYTHFTF-SVSPDNGD----------GLVLSLFPQG-------VFPDEVSPEKWLHSI 147
            SF THF+F S+S + GD           L LSLF +         F  + +  + + ++
Sbjct: 96  RSFSTHFSFSSMSNEIGDDVLAFVMVPSSLDLSLFGKKDNSSSALGFLSQYAKNETVVAV 155

Query: 148 EF------ISANVSSGYVKTEK-------GILLPNNEGKFTSWVDYD--SKMVEIRLSKF 207
           EF       SA +  G  ++ +       G L+ +N    +  ++Y+  SK + +R  K 
Sbjct: 156 EFGISRTGNSARILVGRPESAEIRNLSFVGDLMMDNGRTLSCMIEYEASSKRMMVRFRKS 215

Query: 208 GDSRPYNPLLAYPIDLPIKCGGREVFVGLSSWNSKSSEWSR-VFSWRFGLRN-VPKWMHS 267
           G  + ++P  ++ +DL     G EV VGLSS N  SS  +  + SWRF +R+  P WMHS
Sbjct: 216 GSVKLFDPFFSFSVDLAKLWKGGEVTVGLSSANGNSSSKAHFLHSWRFEIRHPPPMWMHS 275

Query: 268 LPVDPRRRSDKQDHSNPLT-----ILAGLIFATGCGALMAFLVLFMWAIAGNRNAI 279
           +P++P   S ++++    +     +L  LIF   CGAL A L L++W I   R ++
Sbjct: 276 VPLEPNEVSKEEENGRGRSECTRKMLGALIFGAACGALGALLGLYLWTICRVRRSM 324

[Close]

BLAST of Lsi03G003340 vs. TAIR 10
Match: AT5G01090.1 (Concanavalin A-like lectin family protein )

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-24
Identity = 83/295 (28.14%), Postives = 128/295 (43.39%), Query Frame = 0


Query: 28  KQPNFDPQISLIGDAAFVYSDAHPRGGASFVKLTRPVASSFGLLLHNKPLKLHD------ 87
           K P+FD  ++L GD+  V+      GG S ++LT  V+ S G +++ KP++L        
Sbjct: 37  KAPSFDNNVALFGDSKLVH------GGPS-IQLTDSVSRSEGRVIYKKPIRLFQGKERNF 96

Query: 88  STSFYTHFTFSVSPDNGDGLVLSLFPQG------------------------VFPDEVSP 147
           S SF T F+FS+S + G  L   + P+G                        V   E   
Sbjct: 97  SGSFSTSFSFSMSDEIGSVLAFIMVPRGLDLRLFGRKGNNSSSGLGFLLKHKVVAVEFGI 156

Query: 148 EKWLHSIEFISANVSSGYVKTEKGILLP-NNEGKFTSWVDYD--SKMVEIRLSKFGDSRP 207
            K  + +  +     SG V+         N E +   W+DY+  SK +E+RLS     +P
Sbjct: 157 SKRGNHVGILVGRPESGKVRKLSSFGHHFNEEKRLNCWIDYEASSKRIEVRLSLSAALKP 216

Query: 208 YNPLLAYPIDLPIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVPKWMHSLPVDPRR 267
            +P ++Y +DL       +  VGL+S N  +S+   + SW F LR+    +HS P+DP  
Sbjct: 217 VDPFVSYSVDLAKLWKDGKFMVGLTSANGNTSKPVYLHSWSFKLRHPSMRIHSQPLDPND 276

Query: 268 RSDKQDHSNPLT-----------ILAGLIFATGCGALMAFLVLFMWAIAGNRNAI 279
            S                     IL  L+    CG L A   L++W I GNR ++
Sbjct: 277 VSKTVKEGEKTVEVKGKGKCIWRILGALVLGAVCGTLGAMFALYLWTICGNRQSM 324

The following BLAST results are available for this feature:

BLAST of Lsi03G003340 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G003340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDM9	6.3e-150	84.74	L-type lectin-domain containing receptor kinase VIII.1-like OS=Cucumis melo var....	[more]
A0A0A0KA99	6.3e-150	84.42	Lectin_legB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009430...	[more]
A0A1S3B3V6	6.3e-150	84.74	uncharacterized protein LOC103485717 OS=Cucumis melo OX=3656 GN=LOC103485717 PE=...	[more]
A0A6J1H9S2	6.5e-131	76.47	uncharacterized protein LOC111461824 OS=Cucurbita moschata OX=3662 GN=LOC1114618...	[more]
A0A6J1BW10	7.5e-119	70.59	uncharacterized protein LOC111006026 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

BLAST of Lsi03G003340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441637.1	1.3e-149	84.74	PREDICTED: uncharacterized protein LOC103485717 [Cucumis melo] >KAA0041522.1 L-t...	[more]
XP_004138574.2	1.3e-149	84.42	uncharacterized protein LOC101219233 [Cucumis sativus] >KGN45764.1 hypothetical ...	[more]
XP_038885984.1	4.2e-148	85.34	uncharacterized protein LOC120076289 [Benincasa hispida]	[more]
XP_022961282.1	1.3e-130	76.47	uncharacterized protein LOC111461824 [Cucurbita moschata]	[more]
XP_023553507.1	3.4e-126	74.38	uncharacterized protein LOC111810901 [Cucurbita pepo subsp. pepo] >XP_023553516....	[more]

BLAST of Lsi03G003340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09035.1	1.3e-25	30.07	Concanavalin A-like lectin family protein	[more]
AT5G01090.1	5.3e-24	28.14	Concanavalin A-like lectin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.200		coord: 122..226 e-value: 1.7E-8 score: 36.2
None	No IPR available	GENE3D	2.60.120.200		coord: 23..121 e-value: 1.8E-7 score: 33.0
None	No IPR available	PANTHER	PTHR32401	CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN	coord: 9..298
None	No IPR available	PANTHER	PTHR32401:SF15	LEGUME LECTIN BETA DOMAIN PROTEIN	coord: 9..298
IPR001220	Legume lectin domain	PFAM	PF00139	Lectin_legB	coord: 146..225 e-value: 4.8E-9 score: 36.1
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 31..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G003340.1	Lsi03G003340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030246	carbohydrate binding