Lsi03G003180 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G003180
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Eukaryotic translation initiation factor 3 subunit F
Location	chr03: 3850690 .. 3854873 (+)
RNA-Seq Expression	Lsi03G003180
Synteny	Lsi03G003180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTGTTAGGCGTCTTCTTCCAAAAATTGGAGCCAAAACAGAAACCCTAGCATCCGCTTCTGCTCGTTCGTCGTCTCTCTCGGCATCCATTTTCACGGAGCTAGGTTAAATCGAGCTTCAAGCAATGGCAACGACCGAGAACACAGTTTTGCAATTTTCACAGTCTTCTAACACTTTATCTGCGAAGGTTCATCCCCTGGTTATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCGGACCAGGCCGATCGAGTGATTGGTACTCTTCTCGGCTCGGTTTTACCTGATGGAACCGTTGATATTCATAACTCTTATGCTGTTCCTCATAATGAGTTCTCGGATCAGGTTTCCTCCTTACTCTGCATTGAACTAATCTCTAGTGTTTCCTTCATGTAATTGTTCGGGAAACCGCTTATTCTTGCTGTTCTTATTTGGTTTTTAGTCATAATTAAAACCCTAGTTTCTATCGTTTTCATTGACGAATTGATTTCTTACTCTGTTCCGTTGAGGAAATTAGGGTTCCCTGCCTTCTTTCTGCTCTTTATTCAAATTGGTTTCTTCGATTATATTGTACTTTCTGTAAAATTCCTTAATGATTCATGTAAATTACTTAGACGAGGGAATTGTGAACATTTAAAAATGTTGTTGCAGATTGACCTTATAGATTTTGTACGTTCTTTGTTTATTATTATTATTTTTGTTTTGGTAACCGTGAGTGTTATGCTAACGCATCACAGGATAACCTCCTTAACCCTACAAAAGGAAACTATTAGGATGTTAAATTAGGTGGCCACCATGAATTGAACCCATGACCCCTAGCCTTTTGCCCTTTTTTTTTTTTTTTTATGTTCCCACTACTACTAGGCCAACCCATGATAGTTTATATGTTCTTTCATACCTTAGCTCTTTGGCCCTTTTTTGATATATTATGGACTTGCTTTGACGGTTATCTTTGTTCTACAACTTTGCAATAAATTTGCATACTCCGAATTCACAATTCCAATCTTTCATACCTTATTTTATTATTTTCATCATAACAGGTTGCGCTGGATATTGACTATCATCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAAGTTATCGTTGGATGGTAAAGCAGATCCTTCTTTACTATGTTTATCCAAAGGAAGTTATCGTTGGATATTGACTACAGTTTAAGTGCCTTTTCATTTTGAATAAGAAACTGGATATCATTAAAACAGAAACTGGATATCATTAAAACAACAGAGGACCAAACAATTGCAGAGTTACGAAAGTGAGGTACAAGAGCCCAATAAGAGAAAAAACAATATCATCCGACGGATGATCCTTTGAATTCTCCTCATCTTTATCAACTATAGTTAAAGTGTTTTAGTTAATTTCCACAGTTTGTTTTTACAACCATTGTCTGTTGCTCTTTTGGTTTTGGCCATTGACCTTTGTAGATTTCTTACTTTCCGGAATGAATTTTGTTTCTCATTAGAAAGACGTTGGCTGGTAACTTGTGTTTGTTTGATAGCAATTGAAAGTCCACAAATTCACCATATTATTTAGTTTCATGTATACTACACTTGATTTGATCTTTTTCTTGTAATGTTGGTACATAGTCCATCCAAAGTTCTTGTGATATTAAATACTCTTAGACGGCCTATGTGATATTCTTATAGCGTATTATACACCATGTATACTGACAGGTACTCAACTGGTACGGGAGTTACAGGTGGCAGTGCATTGATACACGAATTTTATTCAAGAGAAGTTGCAAACCCTATTCACCTGACTGTTGATACTGGATTTAAAAATGGTGAAGGGACGATAAAAGCCTATATCTCTGTCAATTTGTCCCTGGGAGATAGACAACTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCGGATGGTTGAAGCTGAGAGACTTGGATGTATGAATTTAATCAATGCTCTTGTTTTACTTTCATTATTGAATTGTCGAAGCTGCACTCTCTATCTCATTGATAAATATCCTCACACCCATTTTTCATTGATATTAATGCATTCTCAAACTTTTAGGTGAGTCACTATAATGTTCAGCCTCATTGAGACAGCTGTATGAAAATTTTGATCTAAACTTTTTGAATATCCCCTGCTTATGTGAGAATGTATTATCTTGGTGTGATACGAATTTTAACATTTCTATTTTTGTAGCTTTGCTGGTTTCTGTCCACATGAACTTAGCTTGTGAATTTTTTTCTTAAGCTATATTGCAGTTATTAATGTATAGCGACGGAGATGCATCATTATTGTTTTTTGTATTAGTTCAATTGTGTTTTGTTTCTTAGCCCTGCCCAATCCATTTCAAAACTTTATTCAAGTGAGTTTTATATATTCCGGCCAAGCCCCAGTACTAATGCAATTTGTGGTTACAGTTGATATACTGAAGACAACGTCTGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATTGACGATATTTACAAATATGTTGATAACGTTGTGGTGAGTAACATTTGGGTCTCCTCTTTTGTTATGAATTGTCTTTCGTTTGCTTATGTTACTACTCTCTCAGGAAGGGCACGTTGAGGCAGACAACACGATAGGGAGATTTTTAGCTGACACTGTAGCCTCTCTTCCAAAACTGTCGCCAGCTGCTTTTGATAAGCTGATGAACGACAACGTGCAGGTAGGCTTATTTTATCGTACCTTTTATATTATAATGATGCTATAAATAGAGGCTGTGATGTTAATTAAATATTAAGGCCCGTTCCATAACCTTGGTTTTTGAAATTTAAGCTTATAAACATTTCTTACACCGTTTATTTTCTTTGTTTGGTTATCTATTTTTAGGTGTATTTTCAAAATCCAAATTAGGTTTTGAAAACTAAAACAAGTTGTGTTTAAAAACATGATTTTATTTTTGGAATTGGGCTGTGTTTACTTAGGGGAGGTGAAAATCATGTAAAAGAAATTGTGAGGAAACAATCCCATTTTTCAGAAATTAAAAAAAATTGTGAGGAAACAATCCCATTTTTCAGAAATTAAAAACTAAGGTGCCGTTTGGCCTACCAACTTTTTAAGTTGGTGTAAACAACTCAATTTCAATAGTAAACACTATTAACTTGCACATTTGCACATTTATCGTGTAATTTCATCTTCCCATTTACCAAGGAATTCCATCTTCCCCTTTATCTTTACTTTTCACATTTATCAAGTAACTCTATCTTTACTTTTTAATACTTTTCACATTTACCAAGGAACTCCATCTTCATCTCTATCTTTGCTTTTCACATTTACCAAGTAACTCTATTTTACTTTCTTAATCTACTTTTCTCAATTATCGAGTAACTCAATCTTATAACTCTACATCCCCTAAACCCTAAGCTTACTAACGCCAACGTATTAACCCCAGACTTATTAAACTCTACTCGGTGGGTCAAAAGTCCCCTAAGTGTATATGGTTATCTTACGAGCCTAAATTATTTGAGCTTGGTGCCAGGTTAATGGTTTAGATGAAATTTAAACTTTTACCTGGAAATTATCTGACTGTTTATCCATTTATCTCCCATTACCACCGTTTCATAGGACCATTTGCTGTTGCTGTATTTGTCAAGTATCACCCGGACACAGTTGAGCTTGGCTGAAAAGTTGAATACGGCTGCTCAGATTCTGTAACTTCTTCAACCTGCATCGATGATTTTGCGTGTTATTTGTTTGGTGATTGACCAAAATCTAAGAATTCGGGTACTTAGTTCTTCTGCATAACGCTCTCCCTCCCCTCCTGCAAACCCCCTTTTTGATTGAGCTCACTGTCAGATTCTTCTTATACTGCTTGCTTTGTGGAATATGTTGTCTAGTTTAACGGACGAGGGTTGTACTACCATTATTACCATCAACAATATTGTCCAGACGCCCAATTTTCCCCATACTCAGTATTATGTTGCCACAAATCTTTCTTTCTCATCTCACTTTCAAGTATATTTGTATTATGTTGCAACAAATCTATCTTTCTCATCTCACTTTCAAGCATATTTACTTTCTTTTTTAGAAAGTGAGATCCCTTTCCCGTTGGGGATACAAACAAAGCAATCACGGATGAAGGTGCCCTCTTGAAAGTAATATATATGTGTGTGTGAATTTATATGAA

mRNA sequence

AACTGTTAGGCGTCTTCTTCCAAAAATTGGAGCCAAAACAGAAACCCTAGCATCCGCTTCTGCTCGTTCGTCGTCTCTCTCGGCATCCATTTTCACGGAGCTAGGTTAAATCGAGCTTCAAGCAATGGCAACGACCGAGAACACAGTTTTGCAATTTTCACAGTCTTCTAACACTTTATCTGCGAAGGTTCATCCCCTGGTTATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCGGACCAGGCCGATCGAGTGATTGGTACTCTTCTCGGCTCGGTTTTACCTGATGGAACCGTTGATATTCATAACTCTTATGCTGTTCCTCATAATGAGTTCTCGGATCAGGTTGCGCTGGATATTGACTATCATCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAAGTTATCGTTGGATGGTACTCAACTGGTACGGGAGTTACAGGTGGCAGTGCATTGATACACGAATTTTATTCAAGAGAAGTTGCAAACCCTATTCACCTGACTGTTGATACTGGATTTAAAAATGGTGAAGGGACGATAAAAGCCTATATCTCTGTCAATTTGTCCCTGGGAGATAGACAACTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCGGATGGTTGAAGCTGAGAGACTTGGATTTGATATACTGAAGACAACGTCTGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATTGACGATATTTACAAATATGTTGATAACGTTGTGGAAGGGCACGTTGAGGCAGACAACACGATAGGGAGATTTTTAGCTGACACTGTAGCCTCTCTTCCAAAACTGTCGCCAGCTGCTTTTGATAAGCTGATGAACGACAACGTGCAGGACCATTTGCTGTTGCTGTATTTGTCAAGTATCACCCGGACACAGTTGAGCTTGGCTGAAAAGTTGAATACGGCTGCTCAGATTCTGTAACTTCTTCAACCTGCATCGATGATTTTGCGTGTTATTTGTTTGGTGATTGACCAAAATCTAAGAATTCGGGTACTTAGTTCTTCTGCATAACGCTCTCCCTCCCCTCCTGCAAACCCCCTTTTTGATTGAGCTCACTGTCAGATTCTTCTTATACTGCTTGCTTTGTGGAATATGTTGTCTAGTTTAACGGACGAGGGTTGTACTACCATTATTACCATCAACAATATTGTCCAGACGCCCAATTTTCCCCATACTCAGTATTATGTTGCCACAAATCTTTCTTTCTCATCTCACTTTCAAGTATATTTGTATTATGTTGCAACAAATCTATCTTTCTCATCTCACTTTCAAGCATATTTACTTTCTTTTTTAGAAAGTGAGATCCCTTTCCCGTTGGGGATACAAACAAAGCAATCACGGATGAAGGTGCCCTCTTGAAAGTAATATATATGTGTGTGTGAATTTATATGAA

Coding sequence (CDS)

ATGGCAACGACCGAGAACACAGTTTTGCAATTTTCACAGTCTTCTAACACTTTATCTGCGAAGGTTCATCCCCTGGTTATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCGGACCAGGCCGATCGAGTGATTGGTACTCTTCTCGGCTCGGTTTTACCTGATGGAACCGTTGATATTCATAACTCTTATGCTGTTCCTCATAATGAGTTCTCGGATCAGGTTGCGCTGGATATTGACTATCATCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAAGTTATCGTTGGATGGTACTCAACTGGTACGGGAGTTACAGGTGGCAGTGCATTGATACACGAATTTTATTCAAGAGAAGTTGCAAACCCTATTCACCTGACTGTTGATACTGGATTTAAAAATGGTGAAGGGACGATAAAAGCCTATATCTCTGTCAATTTGTCCCTGGGAGATAGACAACTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCGGATGGTTGAAGCTGAGAGACTTGGATTTGATATACTGAAGACAACGTCTGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATTGACGATATTTACAAATATGTTGATAACGTTGTGGAAGGGCACGTTGAGGCAGACAACACGATAGGGAGATTTTTAGCTGACACTGTAGCCTCTCTTCCAAAACTGTCGCCAGCTGCTTTTGATAAGCTGATGAACGACAACGTGCAGGACCATTTGCTGTTGCTGTATTTGTCAAGTATCACCCGGACACAGTTGAGCTTGGCTGAAAAGTTGAATACGGCTGCTCAGATTCTGTAA

Protein sequence

MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL

Homology

[Close]

BLAST of Lsi03G003180 vs. ExPASy Swiss-Prot
Match: O04202 (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana OX=3702 GN=TIF3F1 PE=1 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 6.7e-127
Identity = 222/291 (76.29%), Postives = 254/291 (87.29%), Query Frame = 0


Query: 2   ATTENTVLQFSQSSNT-------LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLP 61
           AT+E+T+LQF   S+T       L+A++HPLVIFN+CDC+VRRPD A+RVIGTLLGS+LP
Sbjct: 3   ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILP 62

Query: 62  DGTVDIHNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSAL 121
           DGTVDI NSYAVPHNE SDQVA+DIDYHHNML+SH KVN KE IVGWYSTG GV GGS+L
Sbjct: 63  DGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSL 122

Query: 122 IHEFYSREVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAE 181
           IH+FY+REV NPIHLTVDTGF NGEGTIKA++S NLSLGDRQL A FQEIP+DLRMV+AE
Sbjct: 123 IHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAE 182

Query: 182 RLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLAD 241
           R+GFD+LK TSVDKLPNDLEGME +MERLL LI+D+YKYVD+VV G +  DN IGRF+AD
Sbjct: 183 RVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIAD 242

Query: 242 TVASLPKLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
            VASLPKL P  FD L+ND++QD LLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 243 AVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293

[Close]

BLAST of Lsi03G003180 vs. ExPASy Swiss-Prot
Match: Q9DCH4 (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=1 SV=2)

HSP 1 Score: 224.6 bits (571), Expect = 1.5e-57
Identity = 108/263 (41.06%), Postives = 173/263 (65.78%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDTG ++G  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTGLQHGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNV 260
           +  +  R+   +  + +Y ++V+ G V ADNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Lsi03G003180 vs. ExPASy Swiss-Prot
Match: O00303 (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=EIF3F PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-57
Identity = 108/263 (41.06%), Postives = 172/263 (65.40%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 93  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 152

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  +NG  
Sbjct: 153 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 212

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 213 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 272

Query: 201 MEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNV 260
           +  +  R+   +  + +Y ++V+ G V ADNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 273 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 332

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 333 NDLLMVTYLANLTQSQIALNEKL 354

[Close]

BLAST of Lsi03G003180 vs. ExPASy Swiss-Prot
Match: Q4R5B8 (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9541 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-57
Identity = 108/263 (41.06%), Postives = 172/263 (65.40%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  +NG  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNV 260
           +  +  R+   +  + +Y ++V+ G V ADNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Lsi03G003180 vs. ExPASy Swiss-Prot
Match: A5A6I3 (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-57
Identity = 108/263 (41.06%), Postives = 172/263 (65.40%), Query Frame = 0


Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT  +NG  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNV 260
           +  +  R+   +  + +Y ++V+ G V ADNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]

BLAST of Lsi03G003180 vs. ExPASy TrEMBL
Match: A0A5A7UIS5 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G002360 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.1e-156
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Lsi03G003180 vs. ExPASy TrEMBL
Match: A0A1S3B471 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo OX=3656 GN=LOC103485557 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.1e-156
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Lsi03G003180 vs. ExPASy TrEMBL
Match: A0A0A0K7P9 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis sativus OX=3659 GN=Csa_6G010020 PE=3 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 3.5e-155
Identity = 281/285 (98.60%), Postives = 282/285 (98.95%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTS+DKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Lsi03G003180 vs. ExPASy TrEMBL
Match: A0A6J1K2A6 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita maxima OX=3661 GN=LOC111489466 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 4.6e-155
Identity = 279/285 (97.89%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGS+LPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSILPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYIS+NLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISINLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQVL 285

[Close]

BLAST of Lsi03G003180 vs. ExPASy TrEMBL
Match: A0A6J1FKR8 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=3662 GN=LOC111445113 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.3e-154
Identity = 280/285 (98.25%), Postives = 282/285 (98.95%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRM+EAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMIEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Lsi03G003180 vs. NCBI nr
Match: XP_008441439.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit F [Cucumis melo] >KAA0055064.1 eukaryotic translation initiation factor 3 subunit F [Cucumis melo var. makuwa])

HSP 1 Score: 559.7 bits (1441), Expect = 1.5e-155
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Lsi03G003180 vs. NCBI nr
Match: XP_038884110.1 (eukaryotic translation initiation factor 3 subunit F [Benincasa hispida])

HSP 1 Score: 559.7 bits (1441), Expect = 1.5e-155
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LK TSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKRTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Lsi03G003180 vs. NCBI nr
Match: XP_023551601.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita pepo subsp. pepo] >KAG6578443.1 Eukaryotic translation initiation factor 3 subunit F, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016005.1 Eukaryotic translation initiation factor 3 subunit F [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558.1 bits (1437), Expect = 4.3e-155
Identity = 282/285 (98.95%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Lsi03G003180 vs. NCBI nr
Match: XP_004138431.1 (eukaryotic translation initiation factor 3 subunit F [Cucumis sativus] >KGN45775.1 hypothetical protein Csa_005177 [Cucumis sativus])

HSP 1 Score: 557.4 bits (1435), Expect = 7.3e-155
Identity = 281/285 (98.60%), Postives = 282/285 (98.95%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTS+DKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]

BLAST of Lsi03G003180 vs. NCBI nr
Match: XP_022993463.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita maxima])

HSP 1 Score: 557.0 bits (1434), Expect = 9.5e-155
Identity = 279/285 (97.89%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGS+LPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSILPDGTVDI 60

Query: 61  HNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
            NSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYIS+NLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISINLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQVL 285

[Close]

BLAST of Lsi03G003180 vs. TAIR 10
Match: AT2G39990.1 (eukaryotic translation initiation factor 2 )

HSP 1 Score: 454.9 bits (1169), Expect = 4.7e-128
Identity = 222/291 (76.29%), Postives = 254/291 (87.29%), Query Frame = 0


Query: 2   ATTENTVLQFSQSSNT-------LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLP 61
           AT+E+T+LQF   S+T       L+A++HPLVIFN+CDC+VRRPD A+RVIGTLLGS+LP
Sbjct: 3   ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILP 62

Query: 62  DGTVDIHNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSAL 121
           DGTVDI NSYAVPHNE SDQVA+DIDYHHNML+SH KVN KE IVGWYSTG GV GGS+L
Sbjct: 63  DGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSL 122

Query: 122 IHEFYSREVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAE 181
           IH+FY+REV NPIHLTVDTGF NGEGTIKA++S NLSLGDRQL A FQEIP+DLRMV+AE
Sbjct: 123 IHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAE 182

Query: 182 RLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLAD 241
           R+GFD+LK TSVDKLPNDLEGME +MERLL LI+D+YKYVD+VV G +  DN IGRF+AD
Sbjct: 183 RVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIAD 242

Query: 242 TVASLPKLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
            VASLPKL P  FD L+ND++QD LLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 243 AVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293

[Close]

BLAST of Lsi03G003180 vs. TAIR 10
Match: AT3G11270.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-30
Identity = 87/266 (32.71%), Postives = 136/266 (51.13%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    GTVD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKN 141
           D +YH +M    +++N KE IVGWYSTG  +      +H  ++  V NP+ + +D   K 
Sbjct: 79  DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDIL----KTTSVDKLPNDL 201
                KAY +V  +   +     F  +P ++   E E +G + L    K T++  L  ++
Sbjct: 139 LGIPTKAYYAVEENATQKSQQV-FVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLATEV 198

Query: 202 EGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMND 261
                +++ L A + +I  Y+D V+EG +  ++ I   L D    LP L+     K    
Sbjct: 199 TAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFAV 258

Query: 262 NVQDHLLLLYLSSITRTQLSLAEKLN 280
              D +L++YLSS+ R+ ++L   +N
Sbjct: 259 KTNDMMLVIYLSSLIRSVIALHSLIN 282

[Close]

BLAST of Lsi03G003180 vs. TAIR 10
Match: AT3G11270.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-30
Identity = 88/268 (32.84%), Postives = 137/268 (51.12%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    GTVD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKN 141
           D +YH +M    +++N KE IVGWYSTG  +      +H  ++  V NP+ + +D   K 
Sbjct: 79  DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQ--FQEIPLDLRMVEAERLGFDIL----KTTSVDKLPN 201
                KAY +V     +    +Q  F  +P ++   E E +G + L    K T++  L  
Sbjct: 139 LGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 198

Query: 202 DLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLM 261
           ++     +++ L A + +I  Y+D V+EG +  ++ I   L D    LP L+     K  
Sbjct: 199 EVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 258

Query: 262 NDNVQDHLLLLYLSSITRTQLSLAEKLN 280
                D +L++YLSS+ R+ ++L   +N
Sbjct: 259 AVKTNDMMLVIYLSSLIRSVIALHSLIN 285

[Close]

BLAST of Lsi03G003180 vs. TAIR 10
Match: AT5G05780.2 (RP non-ATPase subunit 8A )

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-29
Identity = 84/266 (31.58%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    G VD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKN 141
           D +YH +M    +++N KE +VGWYSTG  +      +H  ++  V NP+ + +D   K 
Sbjct: 79  DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDIL----KTTSVDKLPNDL 201
                KAY +V  +   +     F  +  ++   E E +G + L    K T++  L  ++
Sbjct: 139 LGIPTKAYYAVEENATQKSQKV-FVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEV 198

Query: 202 EGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMND 261
                +++ L A + +I  Y+D V+EG +  ++ I   L D    LP L+     K  + 
Sbjct: 199 TAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSV 258

Query: 262 NVQDHLLLLYLSSITRTQLSLAEKLN 280
              D +L++YLSS+ R+ ++L   +N
Sbjct: 259 KTNDMMLVIYLSSLIRSVIALHNLIN 282

[Close]

BLAST of Lsi03G003180 vs. TAIR 10
Match: AT5G05780.1 (RP non-ATPase subunit 8A )

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-29
Identity = 85/268 (31.72%), Postives = 136/268 (50.75%), Query Frame = 0


Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIHNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    G VD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFKN 141
           D +YH +M    +++N KE +VGWYSTG  +      +H  ++  V NP+ + +D   K 
Sbjct: 79  DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQ--FQEIPLDLRMVEAERLGFDIL----KTTSVDKLPN 201
                KAY +V     +    +Q  F  +  ++   E E +G + L    K T++  L  
Sbjct: 139 LGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 198

Query: 202 DLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLM 261
           ++     +++ L A + +I  Y+D V+EG +  ++ I   L D    LP L+     K  
Sbjct: 199 EVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 258

Query: 262 NDNVQDHLLLLYLSSITRTQLSLAEKLN 280
           +    D +L++YLSS+ R+ ++L   +N
Sbjct: 259 SVKTNDMMLVIYLSSLIRSVIALHNLIN 285

The following BLAST results are available for this feature:

BLAST of Lsi03G003180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04202	6.7e-127	76.29	Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana OX=...	[more]
Q9DCH4	1.5e-57	41.06	Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN...	[more]
O00303	1.9e-57	41.06	Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=...	[more]
Q4R5B8	1.9e-57	41.06	Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9...	[more]
A5A6I3	1.9e-57	41.06	Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 ...	[more]

BLAST of Lsi03G003180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UIS5	7.1e-156	99.30	Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo var. makuwa...	[more]
A0A1S3B471	7.1e-156	99.30	Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0K7P9	3.5e-155	98.60	Eukaryotic translation initiation factor 3 subunit F OS=Cucumis sativus OX=3659 ...	[more]
A0A6J1K2A6	4.6e-155	97.89	Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita maxima OX=3661...	[more]
A0A6J1FKR8	1.3e-154	98.25	Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=36...	[more]

BLAST of Lsi03G003180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441439.1	1.5e-155	99.30	PREDICTED: eukaryotic translation initiation factor 3 subunit F [Cucumis melo] >...	[more]
XP_038884110.1	1.5e-155	99.30	eukaryotic translation initiation factor 3 subunit F [Benincasa hispida]	[more]
XP_023551601.1	4.3e-155	98.95	eukaryotic translation initiation factor 3 subunit F-like [Cucurbita pepo subsp....	[more]
XP_004138431.1	7.3e-155	98.60	eukaryotic translation initiation factor 3 subunit F [Cucumis sativus] >KGN45775...	[more]
XP_022993463.1	9.5e-155	97.89	eukaryotic translation initiation factor 3 subunit F-like [Cucurbita maxima]	[more]

BLAST of Lsi03G003180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39990.1	4.7e-128	76.29	eukaryotic translation initiation factor 2	[more]
AT3G11270.2	1.2e-30	32.71	Mov34/MPN/PAD-1 family protein	[more]
AT3G11270.1	2.0e-30	32.84	Mov34/MPN/PAD-1 family protein	[more]
AT5G05780.2	2.3e-29	31.58	RP non-ATPase subunit 8A	[more]
AT5G05780.1	3.9e-29	31.72	RP non-ATPase subunit 8A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 19..150 e-value: 1.1E-31 score: 121.3
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 18..121 e-value: 1.7E-22 score: 79.6
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 7..186 e-value: 8.2E-50 score: 170.6
None	No IPR available	PANTHER	PTHR10540	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED	coord: 17..284
IPR024969	Rpn11/EIF3F, C-terminal	PFAM	PF13012	MitMem_reg	coord: 172..278 e-value: 7.3E-24 score: 84.3
IPR027531	Eukaryotic translation initiation factor 3 subunit F	PANTHER	PTHR10540:SF6	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F	coord: 17..284
IPR027531	Eukaryotic translation initiation factor 3 subunit F	HAMAP	MF_03005	eIF3f	coord: 18..281 score: 36.891888
IPR027531	Eukaryotic translation initiation factor 3 subunit F	CDD	cd08064	MPN_eIF3f	coord: 21..278 e-value: 5.45611E-132 score: 373.079
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 20..151 score: 29.748831

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G003180.1	Lsi03G003180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0006508	proteolysis
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0031369	translation initiation factor binding
molecular_function	GO:0005515	protein binding