Lsi03G002480 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G002480
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	60S ribosomal protein L10-like
Location	chr03: 3118308 .. 3126459 (+)
RNA-Seq Expression	Lsi03G002480
Synteny	Lsi03G002480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCGGCCCTCCGTCATCTTCTCGTATATATAGTAAGAATTAGGGTTTCTAGAGCCGACGAGGTCAAGTTCGAGTCGTGAGGGACGAGGCAACGCGCGATCGCCATGGGGAGAAGTAAGTAAATCTTTTCGATTCTTCATCTAATATATTCTTCAATGTTTCTATCTGACGAATAATCTGCTTGTATTTCGTGGTTTTTGTGTTTTCTCACCTTCAATGTTAGATACAAATTGTTCGTCGTTTTTTTATGGATGAAATCTGAAAATAAGCGAGGAGCGTCGTTTTTTCTTGACGGAAAATTTAATTGTTGGAAATGGATGGATTTCCGCTTGTTCCCGTTGGAAGATGTTGTGCTTTTTCTTTAATATATTGATTTTGAGTTCTTTGACATTTGTACTTCGTTCTAGATTTCCAATATTTAATTTTTTTTGATGATTTATGAAGTATTATGTTGTAATCCATTCATTATATCGTATGAGATTAAGTAATTATCGTGTAGTGTTAGCATCTATGTAAGGCAGACTCTAAAGAAGTAAACCTTGCACCCTTCCTGGTTTTCACGTTATACAATTCACGGATTGGGGCTTTTCTCTGCATATGAAGAAAATTGTCACTGTTTTGCTTTAATTGCTTTTCAGTTGCGTGTTTTTATTAGTTAATAGGGTGCATTTGCTCGCTGGAAAATGTTTGGTGTTGATTGTCAGAATATGCAAGTTATGAAAATGGATGTGTGCTTAGCAAGGCTTTTTTTCATCATGTTGTTTTGAGTTGATAACCTCTGGGGACATCATTATTTATCCTGATAGTCTTGTATGAATAGCCACAGTCCTGATTAACTTTTGTTGACAACTCATTTTGATTATAACTTGATCTTGATAATTCTATGCTGGCTCTACTTCACTACATGGTTGTTGCATGTTATTCATTTCCGTGCATTCTTTATTGTAGGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCTGACCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGCGTGGATGAATTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAAGAAAACGTGTCCAGTGAGGCTTTGGAAGCTGCTCGGATTGCCTGCAATAAGTATATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGGGTCAGGGTGCACCCTTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACAAGGAACCTGTGCAAGAGTTGCCATTGGTCAGGTTCTTCTTTCTGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGCCAGAAGATCATTGTTAGCAGGAAGTGGTATGCCTTAAGAGATCTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAATCAAATTTTACACATTATATCACATCAACTTACGTGATGCTTTAAGTGATATCATATATTATTTTCAATTTTACACATTAATTTCATGTCAATTCCTATTTCACTTTAAGAAAAAAAAAACTATTCTAAGTGACTTGGGACTTCCATTGAAGAGAATCCAGAAGATTCTTCTCCTTGGAACATTTTTTCATGGGTTGTGTGTGCTTTAATTTTTTGTGTGTTCCGTAGGTTTTGTCATTGTTTTTTTTTTTTTTTTTTTTTTTTAGTTTCTTCTTGTTCAGCTAAATGCGCTTGTGGGTCAAATGTGTTGTTTTAGTGCCTCTGTTTCTTGTGGAGTAATTAAATCTTAAATGTTACTCATGCTAGTCTTATTGATTGAATGATGAATGCTTCAAATTTCCTTTTCAGGGGATTCACTAAATTCAGTCGGGCTGATTATCTGGCTTACAAGGCAGAGAACAAAATTCTTCCAGATGGTGTAAACGCCAAGGTAAGCTATATTACATTCAGCCACATACTTTGCCTTCCTGTTATTATAAACTGTTCAAACGTCTTGGATTTTTTCCATTTTGTAAGCACAAGAATGGATGTAGGGTTAGCTATGACAACGAGATATGCTACTTCTCTCTTTCTATTATATGAATTCAGACTCATTAAAAAGCAACCGAAGAGTATTGATATTCCTTGGATGCATGCTATAAAAAGGTTGTTTGGTTCGGATGGTGGGTCGTAGGTCATGTTTCCCGGAGCATTTCTCGAAATCTGTTGGTCTAATTGCATGCATCCTTTTGTAGTTACGGTCTTTCTTCTCTTATATCTTAGTGGGTTAGGACCCTGCTCTTCTGTAATCATTTCACATCTACACTGTTTTACGAATTGTTTCATGGTTAATTTGCTTATTTGTTTCGTGTACTTGAAGTTGCTCTATCTTATTACTTCCTATTTGGTAACTGATGGGGTCACAACTGAACTTTTCAGCTTCTTGGATGCCATGGACCTTTAGCAAATCGTCAACCTGGAAGAGCATTTCTACCTCAAACTGCCTAAGATCAGCTAGTTGTTTCGTTTTGTCGTTGCAGTTTCTTTCGATTTTGACACTTGAACAAGTCTTTATTAGCATATTTTGTTTGTATTAACACACATTATTCCGGCAGTTTTATTGACCTAGTATGTTGGAGATATCAAGGATCTGGGGTTTTAAAGTAAAGGTGGGTAGGGATCAGCACTTTTTTCTCTCCCCCTCAATTTAAATTTGTTCTGCTAAACTATTCAAATTTAAAATTGTTTTACTTTTACAAACTAGTTAAGTCTAAATTATGGAAAATGGTTCGAATTAGTTCATTTCCCTACGAGGATATGAATGTTCAATCTGATCAGCAGTGATTTCTGTGAAGTTTCATTTTAAATACCAATACATCTAGACCCTCAAGTTAGTTCCACTTCCTTTTAACGCAAAATTTACCAAAGCTTATCATGAGAATAGTGGTTTATTCTATAGCAATTAAGGTTACTGAATTTCTTATGTACTGAATTGAATTATTGAAATCGTGTATAAAAGATATCCTTGATACTCAGTAGGCCGAACTTGATCAATCCGTAACAATTTCAAGAGCTTTCTTCATTAGTAAAATGTATTTGGCTCGGCGGTCTATGTGCTAGGGTTGTGCTAGGGTTTGGCCTCAATGGTGTAAATTTGATATCAAATTAGTGATTCACCAGATGTATCGAACTTAACCAGTCTAATTTTACTAATTATAATCTTTTGAATAGCGTTAATTAAAAAACCTTCTGTATTATATGAGATACAAAATAAACTGTTTTCCTTTTCAGAAAAACATATAGGCTATTATTAATTGACAGTTGCTGTTACATATTAATAATAATAATGTAGTCTGTTGTTTATTTAATATAGAAAATAGAACAAAAGAAAAATGTCAATGGTCCAACAATTTTAGAACAATCTTTCAGTTCATGTTATACAAATTCAAAGAGAAAAAAGGTAAGAGAAACTGAACTTTTATTTAAAAATAAAAAACCTTTTGGTGTTTTATGTATCGAAATATGCTCTGATTAATGGATAATTTGAACGTGTTAGTTTTTTTATTTTATTTTTCTAAGGATAATAATATTGGTATTTACACTTTAATTGGTAACTGATCCGATACAACCGAGCCAAGTTGCCACGGTCGGTCCGCTTCAAAACCGGTCCGGTTGGGTGATTCTGGGAGGAAATTTCTTTTTCTTGTATTCGCTGCGGTTGTCTTCTCTTCTCTGTGTCCAGTTCTTCTTGGACCGTACTCAGAACTTCATTACAAACTCTCCTGCAATTCTCATTGTGTGAATCTCTCTCCCAAATCTTCATGCTTTCCAAAATCTCAAAACCCTCTCAAAGGGTTGTTGAGAGTCTTCTCGCCCTCAGGCTCAGACTCCATTTCAGTCATCATCCGATCACCTCCTCCAATGCCCGTCCTCCCTTCTCCAATCCTCTTCGAGATCCAATCATCGCAAATTCCTTTTCCTCAGCTCCCTTTTTCCAATCCAAATTCCCTTCAAAACCCATCTCTTCAAACGTTGGTTTGTCCCAAATCCTCTATGCTCCCAAGCTAACTGCCGGAAATTCTTCTCTAACTACTAAATTGAATGCTTATCGTTCTGCTTCTAGGTTTAGATTCTTCTCTTTTAAGACTCCGGGTTTTGGGGGTCAAATCAATGGTAATTTCGCTAAGAAGGTCCTTGATAAGCCCGCTGCGGCTGTTAGTTCCGCATTTTCGCGGTATCGGGAAGCCATTGGGTTGCAAATTGAGGCTTTCTTCAAGAGAAATTATCTAGTTCTACTGGGATTTGGAGCAGCTTTAGTTTGTGCATTGCTATGGAGGATTATGTTTGGTATTGCGAACACCTTTGTTGGGCTTTCTGAAGGCATGGCCAAGTATGGATTTCTCGCTTTATCTTCAGCTATCGTTGCTTTTGCTGTGAGTTTTCTATATTATCTCTTTTCCCTGTATTACCTTCATTTTCTAAGAAAATGGATTTATTGATCCTTTTTTTTGCCTTGCTGATGGTTGAGTTAACCTTTTGTTGTTTACTTGTCATCAGTGGAAATATGGTGATAAATTTCGTCATGCACTTCGAAGAGATATGAATTAAGGTCACAAATTATTGGGCTGGTATAGAAATTATTCTTGCTTATTAAAGAGGAAACCATGTGGGAGCGTTTTTTTGTGTTCATGTTTGGAAGAGAAATTTCAAGGCCTTCTGTTTCTTTTGGATTTTGAACTATATCTGATAGTTATGGAAAAGAAAGAAGGAAAGAAAACGTACTACTTGTGACCTTGTATAGTTCAACGCCTCTAAATGGAGTGCTGAACACAAGTTTTCTACGAGCTACTCTACTTATACGATCAATTTTGATTGTTCGGCCCCCTCTTTTGGGAAAGGGACTTCTTGTCCCTTTGTCCTTTGGGTTGTTTTCTTTGGCTTTTAGTTGTTTGAATGATATCACCTTCTCGGTCCTTAAAAAAAGAAAAAAGAAAATAGAAAAAACGACTACAAGCCTTAGCCAATCCATTGATAGGCTCACAACTAAAGGATTTCATCAAGATACATGCTATTTCAAAATGCGCTTATTACTTTACCTTTGATTTCTGTGAATTTTAGTTTTAATCTCAGTCAAGGAATTTGAATGTAAACCTTCTGCCTGTACACAACAGGCGGAGAAATTTTTTGTTTCTATGTAAATCAAGAATCCATTTGTCCTTCTGTTGAGACCTAGCGGCTAGCTTTATTGTTTGTCATGACCTTTTCTTTGCACTCCAGTTTATGAAGAATTATAGCCTACTTTGTGGATTACCAATGTTGAACGTTATCTACCATTTTTTTCATTTCAAGGGCCTCTATTTGCGATCTAGATTCACAATCAATCCTGATAGAGTTTATAGAATGGCCATGAGAAAGCTCAATACGTCGGCAGGAATTCTTGAGGTTATGGGTGCCCCTCTTACAGGATCAGACCTGAGAGCTTATGTTATGTCAGGAGGCGGGTTAACTCTGAAGAACTTCTCACCAAATCGTAGGAGCAAGCGGTGCTTTCTTATTTTTCCAATTAGAGGTTCTGAAAGGAAGGGTCTAGTCAGTGTTGAAGTAAAAAAGAAGAAGGGCCAGGTTTGCCTTTTTGCTTGCCACTTTCTTATATGTTTAAATATCATGAAGTTATATTTCTTGAATCTTGAAGAAACATTTTGGTATTCTTTCTTGACGACTGACATGAAGTTATATATGGACTCTTTCTGAATTTTTGTATGATCATTATATATTTATGAGTTTTTTCATGTGGAGAAATATCTATTTTGGCTTCTCTCATTAATTTTTCACCAGCTAGCTCTTTAAGTTAGTTAACTTGTGAATGCCTATTCATAATGCATCAAAGAGGTTATACGAATGCACATTACAAGAACATACCTGTTTCTTGTTATTGGATTTCCCAATAGATCTTTGATAGGCAGCTGAAGTAGATACATGAGTACTGACAGAGATTAGCTGCTGACATATGCTGGTTTGATTGTTGAAATATGGTTTAAGGAGTTTGTTGGCCATGAGCTAAAAGTTATGAAGGATATGGTGAGAGAATTATGCAAATATAGGGATACTTCGTAGAGAATCATCATTGTTATCATGGATGAAAAGAATCTTGAAGGTTGACTGAATAAATATGTTGAAGAGTAAACAAGAATATCGAGAAGAGGTTGTGTAAAGCATAGAATGTCACCGTCAACTAATTAGTGAGAAAGAGACTCATTATTATTTTTGGATATCTGTGAATGTCTGGGCAAACTTGTGTGCACCTTAACCATTCTCGCAAAAGAACTGCTTGCTCCTACTATATTTAGTTCACGAAGTAACTTGTAGTATATTTGACTGGAGGTATGTGGTCATTATGGCTTGAACCCATTCTCTCGGTATCTTGTCATATGCTAATTATATTGGTTTTTATTGACCACTAGGCCAACCCATGGTGTTTGAGACTCGGGTTGAGGTTTCTCTTGAAGAGTACCATTTGTGCAAGATTGTGAACCCATGATTTACAGACATTAACAGGTGAAGGATAAACCATCAGGGGAGATCTGGCTTGAATTTACTAATATATATTAAGGTAGCGGTTTTGAATAGTGCACGCAACTGTCTTATAGGAATACTGACGGTGATGGATTAGAGGTGGAGTTTCCCCACTCGTTCACTCTGCCCGTGTGATGAACTTGCAAAATTTTCTCTCTTTGTGGAGGCTAACTTGTATTTAACAAATGATCATTCTGAAAATGATCGGGAAGTTGTGAATCCTGTGATTCCAAGTTCTATGTTTAGCACTATACACATTCAAAGATGGTAATTGAATCTTTCAAGGTTTTGGAAGCTATCAATCATGGATTTTTCTTTCTTTAGTCATACGATGGACAGTTATTAATTTTCAAGGAATCCTGTCGAAACGAAATAAATTTGCCAAGTCTATACTTTGGGAAAAATATGGTCATTTCTTTTAAAACGTGAGCCGTAGTAAACTAATTTTAGATGTTGCTGTCTATTATATGGAATTGAACTAGGAATTGGATATTTCATGATTTGTAGTTATTTACATCCTCCCCTACGTAAGTGCCAAACCACACACACCAAAAGATCAATTATATTTATTAGTTATGAAGTTGCTGAGAAATTCTTTTGCATATTGTACAACTCATCTGAATATATGGTATTATCTTTCTTTACAGTATGATATGAAGCTACTGGCAGTTGACATTCCCATGGCATCGGGACCAGACCAGCTTTTATACCTGATTGGAAACGAAGAAGAGTACAAAATAGCTGGTGGACTGATATCTGAACTAAGGGACCCTGTTGTAAAAGCTATGGCTGCTACCAAGGAATTTGATGACCTTGACCAAATTGAGGAAAAGGAGGATGCAGAGAGAGAACTTCAAGAGGCAGAGAGAAAGCACCAAGAAGAGATCGAAAAACTCGAGAAAGGACGATGAATTTTGCGACATCATTGTCTTCATAGCAATTCTTTGGAGCTGTTTTGAGTTTGTAGTCTCATCTTAGAAAAATCAACTTGATTTTAATAACCCCAAATCTGTATGTTTATTGTATTTTTTGAAGGCTCACTTTTGACTTTGTGCAAGATTTCCTTTGAATTTTAGAGTGAAAACAAGGATCATTCCGGCAAGTAAGTTGAATAAAGCTTGCAATGTTTATGATCGACGCTTCTGTTGAAACTCGATTTTTGGACGTAAGATCTGAGAATCTCGTGAAGAAGATGCAATACGAGCATAATATTTGCTTCAAGAAATAAGGGCAGTATAGGATTTAACTACAAATTAAAATCATATTGTCATTTTTGTATT

mRNA sequence

ATGGCGAGCCGACGAGGTCAAGTTCGAGTCGTGAGGGACGAGGCAACGCGCGATCGCCATGGGGAGAAATTTTGTCGTGGTGTCCCTGACCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGCGTGGATGAATTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAAGAAAACGTGTCCAGTGAGGCTTTGGAAGCTGCTCGGATTGCCTGCAATAAGTATATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGGGTCAGGGTGCACCCTTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACAAGGAACCTGTGCAAGAGTTGCCATTGGTCAGGTTCTTCTTTCTGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGCCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTCAGTCGGGCTGATTATCTGGCTTACAAGGCAGAGAACAAAATTCTTCCAGATGGTGTAAACGCCAAGGATAATAATATTGTTCTTCTTGGACCGTACTCAGAACTTCATTACAAACTCTCCTGCAATTCTCATTGTGTGAATCTCTCTCCCAAATCTTCATGCTTTCCAAAATCTCAAAACCCTCTCAAAGGGTTGTTGAGAGTCTTCTCGCCCTCAGGCTCAGACTCCATTTCAGTCATCATCCGATCACCTCCTCCAATGCCCGTCCTCCCTTCTCCAATCCTCTTCGAGATCCAATCATCGCAAATTCCTTTTCCTCAGCTCCCTTTTTCCAATCCAAATTCCCTTCAAAACCCATCTCTTCAAACGTTGACTCCGGGTTTTGGGGGTCAAATCAATGGTAATTTCGCTAAGAAGGTCCTTGATAAGCCCGCTGCGGCTGTTAGTTCCGCATTTTCGCGGTATCGGGAAGCCATTGGGTTGCAAATTGAGGCTTTCTTCAAGAGAAATTATCTAGTTCTACTGGGATTTGGAGCAGCTTTAGTTTGTGCATTGCTATGGAGGATTATGTTTGGTATTGCGAACACCTTTGTTGGGCTTTCTGAAGGCATGGCCAAGTATGGATTTCTCGCTTTATCTTCAGCTATCGTTGCTTTTGCTGGCCTCTATTTGCGATCTAGATTCACAATCAATCCTGATAGAGTTTATAGAATGGCCATGAGAAAGCTCAATACGTCGGCAGGAATTCTTGAGGTTATGGGTGCCCCTCTTACAGGATCAGACCTGAGAGCTTATGTTATGTCAGGAGGCGGGTTAACTCTGAAGAACTTCTCACCAAATCGTAGGAGCAAGCGGTGCTTTCTTATTTTTCCAATTAGAGGTTCTGAAAGGAAGGGTCTAGTCAGTGTTGAAGTAAAAAAGAAGAAGGGCCAGTATGATATGAAGCTACTGGCAGTTGACATTCCCATGGCATCGGGACCAGACCAGCTTTTATACCTGATTGGAAACGAAGAAGAGTACAAAATAGCTGGTGGACTGATATCTGAACTAAGGGACCCTGTTGTAAAAGCTATGGCTGCTACCAAGGAATTTGATGACCTTGACCAAATTGAGGAAAAGGAGGATGCAGAGAGAGAACTTCAAGAGGCAGAGAGAAAGCACCAAGAAGAGATCGAAAAACTCGAGAAAGGACGATGAATTTTGCGACATCATTGTCTTCATAGCAATTCTTTGGAGCTGTTTTGAGTTTGTAGTCTCATCTTAGAAAAATCAACTTGATTTTAATAACCCCAAATCTGTATGTTTATTGTATTTTTTGAAGGCTCACTTTTGACTTTGTGCAAGATTTCCTTTGAATTTTAGAGTGAAAACAAGGATCATTCCGGCAAGTAAGTTGAATAAAGCTTGCAATGTTTATGATCGACGCTTCTGTTGAAACTCGATTTTTGGACGTAAGATCTGAGAATCTCGTGAAGAAGATGCAATACGAGCATAATATTTGCTTCAAGAAATAAGGGCAGTATAGGATTTAACTACAAATTAAAATCATATTGTCATTTTTGTATT

Coding sequence (CDS)

ATGGCGAGCCGACGAGGTCAAGTTCGAGTCGTGAGGGACGAGGCAACGCGCGATCGCCATGGGGAGAAATTTTGTCGTGGTGTCCCTGACCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGCGTGGATGAATTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAAGAAAACGTGTCCAGTGAGGCTTTGGAAGCTGCTCGGATTGCCTGCAATAAGTATATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGGGTCAGGGTGCACCCTTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACAAGGAACCTGTGCAAGAGTTGCCATTGGTCAGGTTCTTCTTTCTGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGCCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTCAGTCGGGCTGATTATCTGGCTTACAAGGCAGAGAACAAAATTCTTCCAGATGGTGTAAACGCCAAGGATAATAATATTGTTCTTCTTGGACCGTACTCAGAACTTCATTACAAACTCTCCTGCAATTCTCATTGTGTGAATCTCTCTCCCAAATCTTCATGCTTTCCAAAATCTCAAAACCCTCTCAAAGGGTTGTTGAGAGTCTTCTCGCCCTCAGGCTCAGACTCCATTTCAGTCATCATCCGATCACCTCCTCCAATGCCCGTCCTCCCTTCTCCAATCCTCTTCGAGATCCAATCATCGCAAATTCCTTTTCCTCAGCTCCCTTTTTCCAATCCAAATTCCCTTCAAAACCCATCTCTTCAAACGTTGACTCCGGGTTTTGGGGGTCAAATCAATGGTAATTTCGCTAAGAAGGTCCTTGATAAGCCCGCTGCGGCTGTTAGTTCCGCATTTTCGCGGTATCGGGAAGCCATTGGGTTGCAAATTGAGGCTTTCTTCAAGAGAAATTATCTAGTTCTACTGGGATTTGGAGCAGCTTTAGTTTGTGCATTGCTATGGAGGATTATGTTTGGTATTGCGAACACCTTTGTTGGGCTTTCTGAAGGCATGGCCAAGTATGGATTTCTCGCTTTATCTTCAGCTATCGTTGCTTTTGCTGGCCTCTATTTGCGATCTAGATTCACAATCAATCCTGATAGAGTTTATAGAATGGCCATGAGAAAGCTCAATACGTCGGCAGGAATTCTTGAGGTTATGGGTGCCCCTCTTACAGGATCAGACCTGAGAGCTTATGTTATGTCAGGAGGCGGGTTAACTCTGAAGAACTTCTCACCAAATCGTAGGAGCAAGCGGTGCTTTCTTATTTTTCCAATTAGAGGTTCTGAAAGGAAGGGTCTAGTCAGTGTTGAAGTAAAAAAGAAGAAGGGCCAGTATGATATGAAGCTACTGGCAGTTGACATTCCCATGGCATCGGGACCAGACCAGCTTTTATACCTGATTGGAAACGAAGAAGAGTACAAAATAGCTGGTGGACTGATATCTGAACTAAGGGACCCTGTTGTAAAAGCTATGGCTGCTACCAAGGAATTTGATGACCTTGACCAAATTGAGGAAAAGGAGGATGCAGAGAGAGAACTTCAAGAGGCAGAGAGAAAGCACCAAGAAGAGATCGAAAAACTCGAGAAAGGACGATGA

Protein sequence

MASRRGQVRVVRDEATRDRHGEKFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAKDNNIVLLGPYSELHYKLSCNSHCVNLSPKSSCFPKSQNPLKGLLRVFSPSGSDSISVIIRSPPPMPVLPSPILFEIQSSQIPFPQLPFSNPNSLQNPSLQTLTPGFGGQINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEFDDLDQIEEKEDAERELQEAERKHQEEIEKLEKGR

Homology

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BLAST of Lsi03G002480 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 3.6e-95
Identity = 173/209 (82.78%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 5   RGQVRVVRDEATRDRHGEKFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSS 64
           R   R  R    +     +FCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSS
Sbjct: 3   RRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSS 62

Query: 65  EALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP 124
           EALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP
Sbjct: 63  EALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP 122

Query: 125 QGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYL 184
           QG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR DYL
Sbjct: 123 QGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYL 182

Query: 185 AYKAENKILPDGVNAKDNNIVLLGPYSEL 214
            YK+EN+I+PDGVNAK     LLG +  L
Sbjct: 183 KYKSENRIVPDGVNAK-----LLGNHGPL 206

[Close]

BLAST of Lsi03G002480 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.7e-94
Identity = 165/196 (84.18%), Postives = 176/196 (89.80%), Query Frame = 0


Query: 5   RGQVRVVRDEATRDRHGEKFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSS 64
           R   R  R    +     ++CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSS
Sbjct: 3   RRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSS 62

Query: 65  EALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP 124
           EALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP
Sbjct: 63  EALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP 122

Query: 125 QGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYL 184
           QGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKWGFTKF+R DY+
Sbjct: 123 QGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYI 182

Query: 185 AYKAENKILPDGVNAK 201
            +K++N+ILPDGVNAK
Sbjct: 183 KWKSQNRILPDGVNAK 198

[Close]

BLAST of Lsi03G002480 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 8.8e-94
Identity = 172/209 (82.30%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 5   RGQVRVVRDEATRDRHGEKFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSS 64
           R   R  R    +     +FCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSS
Sbjct: 3   RRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSS 62

Query: 65  EALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP 124
           EALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP
Sbjct: 63  EALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP 122

Query: 125 QGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYL 184
           QG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKWGFTK +RADY 
Sbjct: 123 QGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRADYP 182

Query: 185 AYKAENKILPDGVNAKDNNIVLLGPYSEL 214
             K+EN+ILPDGVNAK     LLG +  L
Sbjct: 183 RLKSENRILPDGVNAK-----LLGCHGRL 206

[Close]

BLAST of Lsi03G002480 vs. ExPASy Swiss-Prot
Match: P45633 (60S ribosomal protein L10 OS=Zea mays OX=4577 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.0e-91
Identity = 158/178 (88.76%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 23  KFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFA 82
           ++CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWE+ENVSSEALEAARI CNKYM K A
Sbjct: 21  RYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWERENVSSEALEAARIVCNKYMTKSA 80

Query: 83  GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRC 142
           GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRC
Sbjct: 81  GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRC 140

Query: 143 KDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAK 201
           KD+N+ HA EALRRAKFKFP RQKII SRKWGFTKFSRADYL YK+E +I+PDGVNAK
Sbjct: 141 KDNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYLKYKSEGRIVPDGVNAK 198

[Close]

BLAST of Lsi03G002480 vs. ExPASy Swiss-Prot
Match: A2ZCQ7 (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 SV=2)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-89
Identity = 163/209 (77.99%), Postives = 178/209 (85.17%), Query Frame = 0


Query: 5   RGQVRVVRDEATRDRHGEKFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSS 64
           R   R  R    +     ++CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENVSS
Sbjct: 3   RRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSS 62

Query: 65  EALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP 124
           EALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP
Sbjct: 63  EALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKP 122

Query: 125 QGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYL 184
           QGTCARV IGQVLLSVRCK+SN++HA+EALRRAKFKFPGRQKII SRKWGFTKF+R +Y+
Sbjct: 123 QGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYV 182

Query: 185 AYKAENKILPDGVNAKDNNIVLLGPYSEL 214
             KAE +I+ DGVNA+     LLG +  L
Sbjct: 183 KLKAEGRIMSDGVNAQ-----LLGSHGRL 206

[Close]

BLAST of Lsi03G002480 vs. ExPASy TrEMBL
Match: A0A5D3BP90 (60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001650 PE=3 SV=1)

HSP 1 Score: 844.7 bits (2181), Expect = 2.2e-241
Identity = 469/608 (77.14%), Postives = 487/608 (80.10%), Query Frame = 0


Query: 2   ASRRGQVRVVRDEATRDRHGEKFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 61
           A  R   R  R    +     +FCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN
Sbjct: 25  AMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 84

Query: 62  VSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 121
           VSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF
Sbjct: 85  VSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 144

Query: 122 GKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 181
           GKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA
Sbjct: 145 GKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 204

Query: 182 DYLAYKAENKILPDGVNAKDNNIVLLGPYSEL-HYKLS--CN--SHCVNLSPKSSCFPKS 241
           DYLAYKAENKILPDGVNAK      L    EL HYKLS  C+           S     S
Sbjct: 205 DYLAYKAENKILPDGVNAK----FFLDRTQELVHYKLSFKCSLPDSLYEFFMLSKISKPS 264

Query: 242 QNPLKGLLRV------------FSPSGSDSISVIIRSPPPMPVLPSPILFEIQSSQIPFP 301
           Q  L+GLL +            +S +       I  S    P   S    +  SS +   
Sbjct: 265 QRVLEGLLTLRLRLHFTHHPITYSNANPLRDPFIANSFSSAPSFQSKFPSKPISSNVGLS 324

Query: 302 QLPFSNPNSLQNPSLQT----------------LTPGFGGQINGNFAKKVLDKPAAAVSS 361
           Q  +S   +  N SL T                  P FGGQINGNFAKKV+DKPAAAVSS
Sbjct: 325 QFLYSPKLTAGNSSLVTKLNVHRSASRFRFFSVKIPRFGGQINGNFAKKVIDKPAAAVSS 384

Query: 362 AFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCALLWRIMFGIANTFVGLSEGMAKYGFL 421
           AFSRYREA+GLQIEAFFKRNYLVLLGFGAAL+CALLWRIMFGIANTFVGLSEGMAKYGFL
Sbjct: 385 AFSRYREAVGLQIEAFFKRNYLVLLGFGAALICALLWRIMFGIANTFVGLSEGMAKYGFL 444

Query: 422 ALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGG 481
           ALSSAIVAF GLYLRSRFT+NPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGG
Sbjct: 445 ALSSAIVAFTGLYLRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGG 504

Query: 482 GLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQL 541
           G TLKNF PNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQ 
Sbjct: 505 GFTLKNFRPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQR 564

Query: 542 LYLIGNEEEYKIAGGLISELRDPVVKAMAATKEFDDLDQIEEKEDAERELQEAERKHQEE 577
           L+LIGNEEEYKI GGLISELRDPVVKAMAATKEFDDLDQIEEKED ERELQEAERK++EE
Sbjct: 565 LFLIGNEEEYKIGGGLISELRDPVVKAMAATKEFDDLDQIEEKEDEERELQEAERKNREE 624

[Close]

BLAST of Lsi03G002480 vs. ExPASy TrEMBL
Match: A0A7J6EX48 (Ribosomal_L16 domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_014243 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 3.9e-185
Identity = 362/512 (70.70%), Postives = 408/512 (79.69%), Query Frame = 0


Query: 71  RIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCAR 130
           +IACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CAR
Sbjct: 5   KIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCAR 64

Query: 131 VAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAEN 190
           V+IGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADY+ +K+EN
Sbjct: 65  VSIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYVKFKSEN 124

Query: 191 KILPDGVNAKDNNIVLLGPYSELHYK--------LSCNSHCVNLSPKSSCFPKSQNPLKG 250
           +I+ DGVNAK     LLG +  L  +          CN    N        P S NP   
Sbjct: 125 RIIADGVNAK-----LLGCHGRLDNRQPGKAFLTAKCNLRLHNYHSSHIAKPSSPNPGTT 184

Query: 251 LLRVFSPSGSDSISVIIRSPPPMPVLPSPILFEIQSSQIPFPQLPFSNPNSLQNPSLQTL 310
              +F     DS+S    S P  P      +    SS     ++P S+P S     L+  
Sbjct: 185 AASLF----RDSLSRAHHSAPAPPRFSR--IGVPGSSNAVLTRIP-SSP-SRAGVGLRFF 244

Query: 311 TPGFGGQINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCA 370
           + G    +N +FAKKV +KPA+AV+S FSRYREAIGLQIEAFF+RNYL +LG    + CA
Sbjct: 245 SLG-KANVNTDFAKKVFEKPASAVASTFSRYREAIGLQIEAFFRRNYLFVLGAVGVVACA 304

Query: 371 LLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLN 430
           LLWRIMFGIANTF+G SEGMAKYGFLALSSAIVAFAGLY+R+RFTINPDRVYR+AMR+LN
Sbjct: 305 LLWRIMFGIANTFIGFSEGMAKYGFLALSSAIVAFAGLYVRARFTINPDRVYRIAMRRLN 364

Query: 431 TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVE 490
           TSAGILEVMGAPL+GSDLRAYVMSGGGLT+K+F P  RSKRCFL+FPIRGSERKGLVSVE
Sbjct: 365 TSAGILEVMGAPLSGSDLRAYVMSGGGLTIKDFKPRIRSKRCFLLFPIRGSERKGLVSVE 424

Query: 491 VKKKKGQYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEF 550
           VKKKKGQYDMKLLA+DIPMASGPDQ L+L G+E EYK+ GGLIS+LRDPVVKAM+A KEF
Sbjct: 425 VKKKKGQYDMKLLAIDIPMASGPDQRLFLEGDEVEYKVGGGLISQLRDPVVKAMSAAKEF 484

Query: 551 DDLDQIEEKEDAERELQEAERKHQEEIEKLEK 575
           D LDQIEE+EDAERELQ+AE+K+++EIEKLEK
Sbjct: 485 DTLDQIEEEEDAERELQKAEQKNRDEIEKLEK 502

[Close]

BLAST of Lsi03G002480 vs. ExPASy TrEMBL
Match: A0A6J1FFG8 (uncharacterized protein LOC111444978 OS=Cucurbita moschata OX=3662 GN=LOC111444978 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 5.5e-139
Identity = 264/274 (96.35%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 303 TPGFGGQINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCA 362
           TPGFGGQINGNFAKKVLDKPAAAV SAFSRYREAIGLQIEAFF+RNYLVLLGFGAALVCA
Sbjct: 104 TPGFGGQINGNFAKKVLDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCA 163

Query: 363 LLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLN 422
           LLWRIMFGIANTFVG+SEGMAKYGFLALSSAIVAFAGLY+RSRFTINPDRVYRMAMRKLN
Sbjct: 164 LLWRIMFGIANTFVGISEGMAKYGFLALSSAIVAFAGLYMRSRFTINPDRVYRMAMRKLN 223

Query: 423 TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVE 482
           TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNF+PN RSKRCFLIFPIRGSERKGLVSVE
Sbjct: 224 TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFTPNHRSKRCFLIFPIRGSERKGLVSVE 283

Query: 483 VKKKKGQYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEF 542
           VKKKKGQYDMKLLAVDIPMASGPDQ LYLIGNEEEYKI GGLISELRDPVVKAMAATKEF
Sbjct: 284 VKKKKGQYDMKLLAVDIPMASGPDQRLYLIGNEEEYKIGGGLISELRDPVVKAMAATKEF 343

Query: 543 DDLDQIEEKEDAERELQEAERKHQEEIEKLEKGR 577
           DDLDQIEEKEDAERELQEAE+KHQEEIEKLEK R
Sbjct: 344 DDLDQIEEKEDAERELQEAEKKHQEEIEKLEKER 377

[Close]

BLAST of Lsi03G002480 vs. ExPASy TrEMBL
Match: A0A6J1K0Y8 (uncharacterized protein LOC111489167 OS=Cucurbita maxima OX=3661 GN=LOC111489167 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 2.7e-138
Identity = 263/274 (95.99%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 303 TPGFGGQINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCA 362
           TPGFGGQINGNFAKKVLDKP AAV SAFSRYREAIGLQIEAFF+RNYLVLLGFGAALVCA
Sbjct: 99  TPGFGGQINGNFAKKVLDKPTAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCA 158

Query: 363 LLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLN 422
           LLWRIMFG+ANTFVGLSEGMAKYGFLALSSAIVAFAGLY+RSRFTINPDRVYRMAMRKLN
Sbjct: 159 LLWRIMFGVANTFVGLSEGMAKYGFLALSSAIVAFAGLYMRSRFTINPDRVYRMAMRKLN 218

Query: 423 TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVE 482
           TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNF+PNRRSKRCFLIFPIRGSERKGLVSVE
Sbjct: 219 TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFTPNRRSKRCFLIFPIRGSERKGLVSVE 278

Query: 483 VKKKKGQYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEF 542
           VKKKKGQYDMKLLAVDIPMASGPDQ LYLIGNEEEYKI GGLISELRDPVVKAMAATKEF
Sbjct: 279 VKKKKGQYDMKLLAVDIPMASGPDQRLYLIGNEEEYKIGGGLISELRDPVVKAMAATKEF 338

Query: 543 DDLDQIEEKEDAERELQEAERKHQEEIEKLEKGR 577
           DDLDQIEEKEDAERELQEAE+K QEEIEKLEK R
Sbjct: 339 DDLDQIEEKEDAERELQEAEKKQQEEIEKLEKER 372

[Close]

BLAST of Lsi03G002480 vs. ExPASy TrEMBL
Match: A0A1S3CA96 (uncharacterized protein LOC103498604 OS=Cucumis melo OX=3656 GN=LOC103498604 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 259/273 (94.87%), Postives = 266/273 (97.44%), Query Frame = 0


Query: 304 PGFGGQINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCAL 363
           P FGGQINGNFAKKV+DKPAAAVSSAFSRYREA+GLQIEAFFKRNYLVLLGFGAAL+CAL
Sbjct: 105 PRFGGQINGNFAKKVIDKPAAAVSSAFSRYREAVGLQIEAFFKRNYLVLLGFGAALICAL 164

Query: 364 LWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLNT 423
           LWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAF GLYLRSRFT+NPDRVYRMAMRKLNT
Sbjct: 165 LWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFTGLYLRSRFTVNPDRVYRMAMRKLNT 224

Query: 424 SAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVEV 483
           SAGILEVMGAPLTGSDLRAYVMSGGG TLKNF PNRRSKRCFLIFPIRGSERKGLVSVEV
Sbjct: 225 SAGILEVMGAPLTGSDLRAYVMSGGGFTLKNFRPNRRSKRCFLIFPIRGSERKGLVSVEV 284

Query: 484 KKKKGQYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEFD 543
           KKKKGQYDMKLLAVDIPMASGPDQ L+LIGNEEEYKI GGLISELRDPVVKAMAATKEFD
Sbjct: 285 KKKKGQYDMKLLAVDIPMASGPDQRLFLIGNEEEYKIGGGLISELRDPVVKAMAATKEFD 344

Query: 544 DLDQIEEKEDAERELQEAERKHQEEIEKLEKGR 577
           DLDQIEEKED ERELQEAERK++EEIEKLEKGR
Sbjct: 345 DLDQIEEKEDEERELQEAERKNREEIEKLEKGR 377

[Close]

BLAST of Lsi03G002480 vs. NCBI nr
Match: KAA0039368.1 (60S ribosomal protein L10-like [Cucumis melo var. makuwa] >TYK00552.1 60S ribosomal protein L10-like [Cucumis melo var. makuwa])

HSP 1 Score: 844.7 bits (2181), Expect = 4.6e-241
Identity = 469/608 (77.14%), Postives = 487/608 (80.10%), Query Frame = 0


Query: 2   ASRRGQVRVVRDEATRDRHGEKFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 61
           A  R   R  R    +     +FCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN
Sbjct: 25  AMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 84

Query: 62  VSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 121
           VSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF
Sbjct: 85  VSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 144

Query: 122 GKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 181
           GKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA
Sbjct: 145 GKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 204

Query: 182 DYLAYKAENKILPDGVNAKDNNIVLLGPYSEL-HYKLS--CN--SHCVNLSPKSSCFPKS 241
           DYLAYKAENKILPDGVNAK      L    EL HYKLS  C+           S     S
Sbjct: 205 DYLAYKAENKILPDGVNAK----FFLDRTQELVHYKLSFKCSLPDSLYEFFMLSKISKPS 264

Query: 242 QNPLKGLLRV------------FSPSGSDSISVIIRSPPPMPVLPSPILFEIQSSQIPFP 301
           Q  L+GLL +            +S +       I  S    P   S    +  SS +   
Sbjct: 265 QRVLEGLLTLRLRLHFTHHPITYSNANPLRDPFIANSFSSAPSFQSKFPSKPISSNVGLS 324

Query: 302 QLPFSNPNSLQNPSLQT----------------LTPGFGGQINGNFAKKVLDKPAAAVSS 361
           Q  +S   +  N SL T                  P FGGQINGNFAKKV+DKPAAAVSS
Sbjct: 325 QFLYSPKLTAGNSSLVTKLNVHRSASRFRFFSVKIPRFGGQINGNFAKKVIDKPAAAVSS 384

Query: 362 AFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCALLWRIMFGIANTFVGLSEGMAKYGFL 421
           AFSRYREA+GLQIEAFFKRNYLVLLGFGAAL+CALLWRIMFGIANTFVGLSEGMAKYGFL
Sbjct: 385 AFSRYREAVGLQIEAFFKRNYLVLLGFGAALICALLWRIMFGIANTFVGLSEGMAKYGFL 444

Query: 422 ALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGG 481
           ALSSAIVAF GLYLRSRFT+NPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGG
Sbjct: 445 ALSSAIVAFTGLYLRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGG 504

Query: 482 GLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQL 541
           G TLKNF PNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQ 
Sbjct: 505 GFTLKNFRPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQR 564

Query: 542 LYLIGNEEEYKIAGGLISELRDPVVKAMAATKEFDDLDQIEEKEDAERELQEAERKHQEE 577
           L+LIGNEEEYKI GGLISELRDPVVKAMAATKEFDDLDQIEEKED ERELQEAERK++EE
Sbjct: 565 LFLIGNEEEYKIGGGLISELRDPVVKAMAATKEFDDLDQIEEKEDEERELQEAERKNREE 624

[Close]

BLAST of Lsi03G002480 vs. NCBI nr
Match: KAF4362906.1 (hypothetical protein G4B88_014243 [Cannabis sativa])

HSP 1 Score: 657.9 bits (1696), Expect = 8.0e-185
Identity = 362/512 (70.70%), Postives = 408/512 (79.69%), Query Frame = 0


Query: 71  RIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCAR 130
           +IACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CAR
Sbjct: 5   KIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCAR 64

Query: 131 VAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAEN 190
           V+IGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADY+ +K+EN
Sbjct: 65  VSIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYVKFKSEN 124

Query: 191 KILPDGVNAKDNNIVLLGPYSELHYK--------LSCNSHCVNLSPKSSCFPKSQNPLKG 250
           +I+ DGVNAK     LLG +  L  +          CN    N        P S NP   
Sbjct: 125 RIIADGVNAK-----LLGCHGRLDNRQPGKAFLTAKCNLRLHNYHSSHIAKPSSPNPGTT 184

Query: 251 LLRVFSPSGSDSISVIIRSPPPMPVLPSPILFEIQSSQIPFPQLPFSNPNSLQNPSLQTL 310
              +F     DS+S    S P  P      +    SS     ++P S+P S     L+  
Sbjct: 185 AASLF----RDSLSRAHHSAPAPPRFSR--IGVPGSSNAVLTRIP-SSP-SRAGVGLRFF 244

Query: 311 TPGFGGQINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCA 370
           + G    +N +FAKKV +KPA+AV+S FSRYREAIGLQIEAFF+RNYL +LG    + CA
Sbjct: 245 SLG-KANVNTDFAKKVFEKPASAVASTFSRYREAIGLQIEAFFRRNYLFVLGAVGVVACA 304

Query: 371 LLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLN 430
           LLWRIMFGIANTF+G SEGMAKYGFLALSSAIVAFAGLY+R+RFTINPDRVYR+AMR+LN
Sbjct: 305 LLWRIMFGIANTFIGFSEGMAKYGFLALSSAIVAFAGLYVRARFTINPDRVYRIAMRRLN 364

Query: 431 TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVE 490
           TSAGILEVMGAPL+GSDLRAYVMSGGGLT+K+F P  RSKRCFL+FPIRGSERKGLVSVE
Sbjct: 365 TSAGILEVMGAPLSGSDLRAYVMSGGGLTIKDFKPRIRSKRCFLLFPIRGSERKGLVSVE 424

Query: 491 VKKKKGQYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEF 550
           VKKKKGQYDMKLLA+DIPMASGPDQ L+L G+E EYK+ GGLIS+LRDPVVKAM+A KEF
Sbjct: 425 VKKKKGQYDMKLLAIDIPMASGPDQRLFLEGDEVEYKVGGGLISQLRDPVVKAMSAAKEF 484

Query: 551 DDLDQIEEKEDAERELQEAERKHQEEIEKLEK 575
           D LDQIEE+EDAERELQ+AE+K+++EIEKLEK
Sbjct: 485 DTLDQIEEEEDAERELQKAEQKNRDEIEKLEK 502

[Close]

BLAST of Lsi03G002480 vs. NCBI nr
Match: PPE01073.1 (hypothetical protein GOBAR_DD01924 [Gossypium barbadense])

HSP 1 Score: 616.7 bits (1589), Expect = 2.0e-172
Identity = 339/497 (68.21%), Postives = 377/497 (75.86%), Query Frame = 0


Query: 78  MAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVL 137
           MAK+AGKDAFHLRVRVHPFHVLRINKMLSC+GADRLQTGMRGAFGKPQGTCARV IGQVL
Sbjct: 1   MAKYAGKDAFHLRVRVHPFHVLRINKMLSCSGADRLQTGMRGAFGKPQGTCARVNIGQVL 60

Query: 138 LSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGV 197
           LSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWGFTK+SRADYL +K+EN+I+PDGV
Sbjct: 61  LSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKYSRADYLKWKSENRIVPDGV 120

Query: 198 NAKDNNIVLLGPYSELHYKLSCNSHCVNLSPKSSCFPKSQNPLKGLLRVFSPSGSDSISV 257
           NAK +  +             CN                            P   D   +
Sbjct: 121 NAKVSQAI-----------NECN---------------------------VPHALDEELL 180

Query: 258 IIRSPPPMPVLPSPILFEIQSSQIPFPQLPFSNPNSLQNPSLQTLTPGFGGQINGNFAKK 317
            +  PP              S++  +    FS  +S   P           + + +FAK 
Sbjct: 181 DVGGPP--------------SARFAWRGF-FSFKSSNSAP-----------KFDAHFAKN 240

Query: 318 VLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCALLWRIMFGIANTFVG 377
           +L KPA   +S+ SRYREA+ L  +AFFKRNYL L G G  L+CALLWRIMFGIANTFVG
Sbjct: 241 LLQKPANVFASSLSRYREAVALHFDAFFKRNYLFLFGVGGVLLCALLWRIMFGIANTFVG 300

Query: 378 LSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLNTSAGILEVMGAPLTG 437
           LSEGMAKYGFLALS+AIV+FAGLY+RSR TINPDRVYR+AMR+LNT+ GILEVMGAPL G
Sbjct: 301 LSEGMAKYGFLALSTAIVSFAGLYVRSRLTINPDRVYRIAMRRLNTAPGILEVMGAPLAG 360

Query: 438 SDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAV 497
           +DLRAYVMSGGGLTLKNF P  R KRCFLIFP++GSERKGLVSVEVKKKKG+YDMKLLAV
Sbjct: 361 TDLRAYVMSGGGLTLKNFKPKFRRKRCFLIFPVQGSERKGLVSVEVKKKKGEYDMKLLAV 420

Query: 498 DIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEFDDLDQIEEKEDAERE 557
           DIPMASGPDQ L+LIG+EEEYK+ GGLIS LRDPVVKAMAATKEFDDLDQIEE+EDAERE
Sbjct: 421 DIPMASGPDQRLFLIGDEEEYKVGGGLISMLRDPVVKAMAATKEFDDLDQIEEEEDAERE 433

Query: 558 LQEAERKHQEEIEKLEK 575
           LQEAERK  EEIEKLEK
Sbjct: 481 LQEAERKRLEEIEKLEK 433

[Close]

BLAST of Lsi03G002480 vs. NCBI nr
Match: KAG7016058.1 (hypothetical protein SDJN02_21162 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506.9 bits (1304), Expect = 2.3e-139
Identity = 299/398 (75.13%), Postives = 313/398 (78.64%), Query Frame = 0


Query: 212 ELHYKLSCNSHCVNLSPKSSCFPK-SQNPLKGL--LRVFSPSGSDSISVIIRSPPPMPVL 271
           ELH KLSCN   ++     S F K S+  L+GL  LR+        +S    S    P+L
Sbjct: 60  ELHCKLSCNVRNLSKVFMLSKFSKPSKRVLEGLLDLRIRLHFSHHPVS----SSNGRPLL 119

Query: 272 PSPIL---FEIQSSQIPFPQLPF-SNPNSLQ----------NPSLQT------------- 331
             PI+   F   S Q  F   P  SNP   Q          N S+ T             
Sbjct: 120 RDPIIRNSFSSSSFQSKFSSNPISSNPGLSQILYAPKVTAGNSSVATKLNAYRSASRFRF 179

Query: 332 ---LTPGFGGQINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAA 391
               TPGFGGQINGNFAKKVLDKPAAAV SAFSRYREAIGLQIEAFF+RNYLVLLGFGAA
Sbjct: 180 FSVKTPGFGGQINGNFAKKVLDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAA 239

Query: 392 LVCALLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAM 451
           LVCALLWRIMFGIANTFVG+SEGMAKYGFLALSSAIVAFAGLY+RSRFTINPDRVYRMAM
Sbjct: 240 LVCALLWRIMFGIANTFVGISEGMAKYGFLALSSAIVAFAGLYMRSRFTINPDRVYRMAM 299

Query: 452 RKLNTSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGL 511
           RKLNTSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNF+PN RSKRCFLIFPIRGSERKGL
Sbjct: 300 RKLNTSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFTPNHRSKRCFLIFPIRGSERKGL 359

Query: 512 VSVEVKKKKGQYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAA 571
           VSVEVKKKKGQYDMKLLAVDIPMASGPDQ LYLIGNEEEYKI GGLISELRDPVVKAMAA
Sbjct: 360 VSVEVKKKKGQYDMKLLAVDIPMASGPDQRLYLIGNEEEYKIGGGLISELRDPVVKAMAA 419

Query: 572 TKEFDDLDQIEEKEDAERELQEAERKHQEEIEKLEKGR 577
           TKEFDDLDQIEEKEDAERELQEAE+KHQEEIEKLEK R
Sbjct: 420 TKEFDDLDQIEEKEDAERELQEAEKKHQEEIEKLEKER 453

[Close]

BLAST of Lsi03G002480 vs. NCBI nr
Match: XP_023551594.1 (uncharacterized protein LOC111809375 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 505.0 bits (1299), Expect = 8.7e-139
Identity = 264/274 (96.35%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 303 TPGFGGQINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCA 362
           TPGFGGQINGNFAKKVLDKPAAAV SAFSRYREAIGLQIEAFF+RNYLVLLGFGAALVCA
Sbjct: 99  TPGFGGQINGNFAKKVLDKPAAAVRSAFSRYREAIGLQIEAFFRRNYLVLLGFGAALVCA 158

Query: 363 LLWRIMFGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLN 422
           LLWRIMFG+ANTFVGLSEGMAKYGFLALSSAIVAFAGLY+RSRFTINPDRVYRMAMRKLN
Sbjct: 159 LLWRIMFGVANTFVGLSEGMAKYGFLALSSAIVAFAGLYMRSRFTINPDRVYRMAMRKLN 218

Query: 423 TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVE 482
           TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNF+PN RSKRCFLIFPIRGSERKGLVSVE
Sbjct: 219 TSAGILEVMGAPLTGSDLRAYVMSGGGLTLKNFTPNHRSKRCFLIFPIRGSERKGLVSVE 278

Query: 483 VKKKKGQYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEF 542
           VKKKKGQYDMKLLAVDIPMASGPDQ LYLIGNEEEYKI GGLISELRDPVVKAMAATKEF
Sbjct: 279 VKKKKGQYDMKLLAVDIPMASGPDQRLYLIGNEEEYKIGGGLISELRDPVVKAMAATKEF 338

Query: 543 DDLDQIEEKEDAERELQEAERKHQEEIEKLEKGR 577
           DDLDQIEEKEDAERELQEAE+KHQEEIEKLEK R
Sbjct: 339 DDLDQIEEKEDAERELQEAEKKHQEEIEKLEKER 372

[Close]

BLAST of Lsi03G002480 vs. TAIR 10
Match: AT2G40800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56430.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 416.0 bits (1068), Expect = 4.9e-116
Identity = 223/308 (72.40%), Postives = 261/308 (84.74%), Query Frame = 0


Query: 267 VLPSPILFEIQSSQIPFPQLPFSNPNSLQNPSLQTLTPGFGGQINGNFAKKVLDKPAAAV 326
           +L SP L       +  P++  S  ++ +   + T + GF  +++G+FA+KV+DKP  AV
Sbjct: 70  ILSSPKLNPKLQQALGLPRVNVSFASAFR--LVSTKSSGF-RKVDGSFARKVVDKPVKAV 129

Query: 327 SSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCALLWRIMFGIANTFVGLSEGMAKYG 386
           SS F+RYREAIGL I+AF+K+N LV+ G     VC  LWRIMFGIA+TFVGLSEGMAKYG
Sbjct: 130 SSTFARYREAIGLHIDAFWKKNSLVVFGAAGVFVCIFLWRIMFGIASTFVGLSEGMAKYG 189

Query: 387 FLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMS 446
           FLALSSAIVAF+GLYLRSRFTINPD+VYRM MRK+NT+A ILEVMGAPL+GSDLRAYVMS
Sbjct: 190 FLALSSAIVAFSGLYLRSRFTINPDKVYRMTMRKINTAAEILEVMGAPLSGSDLRAYVMS 249

Query: 447 GGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPD 506
           GGG+T K F P  RSKRCFL+FP++GSE+KGLVSVEVKKKKGQYDMKLLAVDIPMASGPD
Sbjct: 250 GGGITFKKFKPTIRSKRCFLLFPVQGSEQKGLVSVEVKKKKGQYDMKLLAVDIPMASGPD 309

Query: 507 QLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEFDDLDQIEEKEDAERELQEAERKHQ 566
           Q L+LIG+EEEY+I GGLIS LRDPVVKAMAATKEFD+LD+IEE+EDAERELQEAERKH+
Sbjct: 310 QRLFLIGDEEEYRIGGGLISVLRDPVVKAMAATKEFDNLDRIEEEEDAERELQEAERKHR 369

Query: 567 EEIEKLEK 575
           EEIEKLEK
Sbjct: 370 EEIEKLEK 374

[Close]

BLAST of Lsi03G002480 vs. TAIR 10
Match: AT3G56430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in 196 species: Archae - 12; Bacteria - 170; Metazoa - 996; Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes - 1428 (source: NCBI BLink). )

HSP 1 Score: 409.1 bits (1050), Expect = 6.0e-114
Identity = 208/268 (77.61%), Postives = 241/268 (89.93%), Query Frame = 0


Query: 309 QINGNFAKKVLDKPAAAVSSAFSRYREAIGLQIEAFFKRNYLVLLGFGAALVCALLWRIM 368
           +++GNFA+KV+DKP  AVSS F+RYR A+GL ++AF+K+N L++ G GA  VC  LWR+M
Sbjct: 143 KVDGNFARKVVDKPIKAVSSTFARYRMALGLHVDAFWKKNNLLVFGAGAVFVCIFLWRVM 202

Query: 369 FGIANTFVGLSEGMAKYGFLALSSAIVAFAGLYLRSRFTINPDRVYRMAMRKLNTSAGIL 428
           FGIA+TFVGLSEGMAKYGFLALSSAIVAFAGLYLR+RFTINPD+VYR+ MRKLNT+A +L
Sbjct: 203 FGIASTFVGLSEGMAKYGFLALSSAIVAFAGLYLRARFTINPDKVYRITMRKLNTAADVL 262

Query: 429 EVMGAPLTGSDLRAYVMSGGGLTLKNFSPNRRSKRCFLIFPIRGSERKGLVSVEVKKKKG 488
           EVMGAPL GSDLRAYVMSGGG+T K F P  R+KRCFL+FP++GSERKGLVSVEVKKKKG
Sbjct: 263 EVMGAPLAGSDLRAYVMSGGGITFKKFKPTIRNKRCFLLFPVQGSERKGLVSVEVKKKKG 322

Query: 489 QYDMKLLAVDIPMASGPDQLLYLIGNEEEYKIAGGLISELRDPVVKAMAATKEFDDLDQI 548
           QYDMKLLAVDIPMASGPDQ L+LIG+EEEY++ GGLISELRDPVVKAMAATKEFD+LD+I
Sbjct: 323 QYDMKLLAVDIPMASGPDQRLFLIGDEEEYRVGGGLISELRDPVVKAMAATKEFDNLDRI 382

Query: 549 EEKEDAERELQEAERKHQEEIEKLEKGR 577
           EE+EDAERELQEAERK +EEIE  E  R
Sbjct: 383 EEEEDAERELQEAERKEREEIELQEAER 410

[Close]

BLAST of Lsi03G002480 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 331.6 bits (849), Expect = 1.2e-90
Identity = 156/178 (87.64%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 23  KFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFA 82
           ++CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K A
Sbjct: 21  RYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMVKSA 80

Query: 83  GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRC 142
           GKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRC
Sbjct: 81  GKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRC 140

Query: 143 KDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAK 201
           KD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RADY   + E +I+PDGVNAK
Sbjct: 141 KDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADYTKLRQEKRIVPDGVNAK 198

[Close]

BLAST of Lsi03G002480 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 331.6 bits (849), Expect = 1.2e-90
Identity = 162/212 (76.42%), Postives = 176/212 (83.02%), Query Frame = 0


Query: 23  KFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFA 82
           ++CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K A
Sbjct: 21  RYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSA 80

Query: 83  GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRC 142
           GKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRC
Sbjct: 81  GKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRC 140

Query: 143 KDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAKDN 202
           KD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD+   + E +++PDGVNAK  
Sbjct: 141 KDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADFTKLRQEKRVVPDGVNAK-- 200

Query: 203 NIVLLGPYSELHYKLSCNSHCVNLSPKSSCFP 235
                         LSC+    N  P S+  P
Sbjct: 201 -------------FLSCHGPLANRQPGSAFLP 217

[Close]

BLAST of Lsi03G002480 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 )

HSP 1 Score: 329.7 bits (844), Expect = 4.6e-90
Identity = 156/178 (87.64%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 23  KFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFA 82
           ++CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K A
Sbjct: 21  RYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSA 80

Query: 83  GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRC 142
           GKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRC
Sbjct: 81  GKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRC 140

Query: 143 KDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAK 201
           KD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+Y   +A  +I+PDGVNAK
Sbjct: 141 KDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAEYTKLRAMKRIVPDGVNAK 198

The following BLAST results are available for this feature:

BLAST of Lsi03G002480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93847	3.6e-95	82.78	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
Q9SPB3	6.7e-94	84.18	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
Q9M5M7	8.8e-94	82.30	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
P45633	7.0e-91	88.76	60S ribosomal protein L10 OS=Zea mays OX=4577 GN=RPL10 PE=2 SV=1	[more]
A2ZCQ7	1.3e-89	77.99	60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 ...	[more]

BLAST of Lsi03G002480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BP90	2.2e-241	77.14	60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A7J6EX48	3.9e-185	70.70	Ribosomal_L16 domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_0142...	[more]
A0A6J1FFG8	5.5e-139	96.35	uncharacterized protein LOC111444978 OS=Cucurbita moschata OX=3662 GN=LOC1114449...	[more]
A0A6J1K0Y8	2.7e-138	95.99	uncharacterized protein LOC111489167 OS=Cucurbita maxima OX=3661 GN=LOC111489167...	[more]
A0A1S3CA96	1.1e-136	94.87	uncharacterized protein LOC103498604 OS=Cucumis melo OX=3656 GN=LOC103498604 PE=...	[more]

BLAST of Lsi03G002480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039368.1	4.6e-241	77.14	60S ribosomal protein L10-like [Cucumis melo var. makuwa] >TYK00552.1 60S riboso...	[more]
KAF4362906.1	8.0e-185	70.70	hypothetical protein G4B88_014243 [Cannabis sativa]	[more]
PPE01073.1	2.0e-172	68.21	hypothetical protein GOBAR_DD01924 [Gossypium barbadense]	[more]
KAG7016058.1	2.3e-139	75.13	hypothetical protein SDJN02_21162 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023551594.1	8.7e-139	96.35	uncharacterized protein LOC111809375 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi03G002480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40800.1	4.9e-116	72.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G56430.1	6.0e-114	77.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G26910.1	1.2e-90	87.64	Ribosomal protein L16p/L10e family protein	[more]
AT1G14320.1	1.2e-90	76.42	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	4.6e-90	87.64	senescence associated gene 24	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 544..575
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 552..576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 545..576
None	No IPR available	PANTHER	PTHR36354:SF2	IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT	coord: 308..575
None	No IPR available	PANTHER	PTHR36354	IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT	coord: 308..575
IPR001197	Ribosomal protein L10e	TIGRFAM	TIGR00279	TIGR00279	coord: 8..176 e-value: 2.6E-67 score: 223.8
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 1..212 e-value: 7.3E-99 score: 331.7
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 23..175
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 16..168 e-value: 1.6E-33 score: 115.5
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 43..168 e-value: 1.00105E-43 score: 149.564
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 110..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G002480.1	Lsi03G002480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome