Lsi03G002100 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G002100
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Proline dehydrogenase
Location	chr03: 2711320 .. 2720623 (+)
RNA-Seq Expression	Lsi03G002100
Synteny	Lsi03G002100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCATGTGAGACTTATTTTTCAATGCTCTCACATAATGCTGATTTTATTCGTAGAAGAAAAAAAGTCTAAGCAAAAACAAAATTGAAGAGACCACTTGAAAAAATCCAAAAAAAGGGAGCAAAAATTGGAAACATTTTCACTTCTTAATTGCATCTTTGACAGCATCAGCGGCCCCTTGTGCCTTGGCCTTTCTTGTTGCCCTGCTTCTTGCATTGATTCCTTAGTTGATTGGGCTACATCGCTTGCCTTGTTCATCATATTACTCACCTTAAGACACAAACTAATTAACATGTTACTCTATCACCCATTCATTTTATATTTAATCGTCATAAAGTATTAAAAAAATATAATAATTAAACATGCAATCGATAAAATGATGGCGTGGTTAAATTTAAATAGCAATGGCTAAGTGAACCTGAGCTTGGCCCTTGACTTCTCAGCGTAGTAGCTCATCTTTTGGGACTTATCCAATTTTTTTATAATGAATTTTAAAAATACAAAAATTAGGAGCTTAGAACTTGAGAAAGACTTGGTGAATATAGTTTGAGAGTTTTGTTGATTTAGAAAATCAAACTTGTTGGGAGTTATATAGTAGTTACAATCCATTCACTACTTGACACGTGCAATGCCACAAGTAAGTAACTTGCATGCCACGTGGTAGTTTGTGATTTGAAGTGACACTTGTCATATGATGTTGTTGGAATTGTTCTAAATTAAGGCCCAATTGACTAGGTTTAATTAAGAGTTCAGACATGTTGGACATTGTCTACAAAATTTGGTTCTTTTTTAGAGTTTCTTTTTTCTAAAAGGTAGAAATCAAAACTAATATTTGAATCAATTTAAACTATAAACTTTAAATAGTTAATCAATTTTGACCCTTAATTAGATTTTTATTATTATAGTAAAATTTATATGATGTACAATAAGCAAACATTGTGTCAGCATATATACTTTAAACATAGTCACATTAATGATGAATACTTTGTTTAAACATGATCAAATTTATATGATGTACAATAAACAAACTAATATTTCTCCTTGTACTTCACAAGGAGAAAGATGATCTTGTTAGACATAGTCACATTAATGATGAATACTTTGTTAGACATGGTCAGATCATTAAGAAGTTACACATCATTGCCATACTCTGGTAAGGACTTGCAATAAAGATTGCACTGTGAACATTATTCTCTCCAAAACTGTTTGGGAGACAATTTTGGATTATGAAAATGTAGTAAACTAGTTTACAACATTTCAGAATTTGGGTACGTTAAGATGCATATGCTGAAACAAGCCTAAGAGGAATATACATGTTCAAAGATATGCCTATATGTAGGTTGTCCTCTACGAGAAAAAGAAAGCTTTTATGCAATCCTAAATAAAGTTATGTATTCGTATATATCCTACAAGATGAGAGACTTCATCTCAGTTTGAGTTTGTAGACTTTCTTGATAGGGTAAACCCATAGGATATGAATAGATCTACAAAAGAAGACGTGCGTGTATAGATAAGAAGATACAGATCTTCAAGGTAAGACTCATGGCAAAAAATGAAACCAGTCGAGAGAAATTAGATTGTGAGTCAATTTTCTCACTTGATGCCATAACAGAGTCTTAGCGTTGTTCATTCTTGCATATGAGATATGTAAAATGTAAGCTTAGATTCTTTTATGAAAATAATTTAAGGAATGCATCTATACAGATAAACAGAGGAGTTCAACTTTCAAAGATCAAATGCAAAGAGTTTTCATATGTGTATATTTTCATTTGAGAAATGAATTAGATAATTAGATCGTTGAATATAAGGTTTGATAAGAGTTATCATAACCTATGACTTTGAACAAATATTAATGATCTTGTATAGACAAGAGAGTCATTAATTGACAAGTGGATATTTCTCATATTTTATGTTAATAAAGTATCACTCATTATGAATGATGTAATATAACATAAAAATTTGACTACCTAACCGATTAGGAACACGACGTTAAGTAAGTCTCAAGCATCTTGCATTTCCAGAATGTTTGTCAAATATTCGATGCAAAACTTCAAAAGAATGATAGTGCATCATTCTAATGTGAAGTTAAGTCTAAGAAAGAGTATCCTAAGACACCTCAAGTGTTAAGGACAAATAATTAATTATCTTCTCTCAGTAGGAGATACTTAATGCATAAATAAGACTTAACATACAATTGGTTAGTTATATCGGTTATATCATGGTATGACCATTGAAGTACAAAATTAAAACCTTTCTCAAGGTATATATGGATAATGAAATTTTTTTGTGTATAGTGTTAAGATATGATCTTTCACAAGATACACTAGTCTTAGTCTTACAAAGATTTAGAGAAATCCATTGTAAGATTAATTTTATCCTTTGTGGTGATTGTTTTTGCTTGTGAAGCAAAATTTTGTGTAGCCATAAAATATCCTTAAAGATCTAAAAATGTTTCAGTTCTGAGTTAGTCTATCGCACTTTTATGAGATAATAGGGGTGCAAAGACTAAGACTAAGGATATTGGTAAATACCAACTACTAGGATAAGACATATTGGTAAAAGGTATCATGGTAGTGACCAAGATGACTATGAATGATATATGGTTTGATTTATATAAAAGGACTCTCTAGGCTAAAGTGTTTGAGAGTCACCTAGAATGTCTAGAATTATGAGACACGTCTCTTCTTCGCTAGGGCAAGTGAGAGAACTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGTTGTATTTTGACCGTCATTAATAAATGGTTATTCATTATGATTCAATAAATGTTATTGATTATTTTATCTTGTTTTAATAACCCTAAAATCCAATAAACTAACATCCTAGGCTGTTTTATGAGTCTTGAACAATATGTAAAGACATATAGAGATCAATGTTCAAGTTACAGCCTAAAGGGTCTATAGTATAAGGATAGGGCTCGGTACCTTATCCTGGTAACACTATGGATACGGCCCACTTTGTATTTGATACAAACGCAATGATCCAACGCGTTCGTGTAGGAGACATGCGAGAGGGGGTATCCTATGCAATGAGTTTGCATAAGACTGGACCACAAAATAGTAACCACTAGATATAACTCCGTCGACTGGTTAGGTTTCTATTTCAATAAGTTGACGTAGGCAACTTAGTCTTAATCTTGAGTATATTATGAACTCCTGTTCACGAGGGATTGTCCTTTGATTTGTATGGGTGAGAGTGGCCCGTTTGCCGACTCAATATGCCTACCATTTTGGGGACAAGACTGAGTGGGGAGCTGGGAACATAATTATACAAGATGGATTTCACTCCTTCCCGACTTTAGGGTAAGTAGATAAGTGTTCCCTTAAGTGGTGTCTCCGGGACTTGAACAAAGGGCCCTACCCTCTCACTGGCCCGAGAGAGGTTTCTGTTTGATGGTTGGACCATAAACAAGTTGTTCATTAGAGGAGCACTGGTACTTAAGGATTTAGAAGTAACTCAGGGGTATAACGGTAATTTGACCAAGCTGGTGTTACAAAACTTGTGAAGGACTAACTTGTTGTTATTGGTCTATATCCGTGGACACAGAAATATATCTACAGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGTACCCACAGTTAACGAATATTGATTAATGTGGTTAATGAGTTTAGCCCGTTAATCTCATATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCCTTCTTAGCTCGTAAAGAATATTGAGGAAATTTATTCTTGGATGAAATTCGAAAATTTCAAATTTACTAAGGGAAAAGTATAATGTATAATGATACATTATAATATAAAGTTTATTTTACAAATTAAACTTTATAGTATAAATATAATTTTGGATATGATTCAAAGTTAATTTGTAAGAGAATTAAATATTTGAAATTGTTCAAATATTATTTTAATATGAATTAGATTTATATTAAAACTATAGGTTAAAATTAATGCGCATTAGATGTACATTAAAACTATAGGTTATGAGATAAATGTATTTGAATTTGATTCAAATGCAAGTTAAAATTAAATATTTGGTAATTAATTAATTGGAGAATTAATTAGTTATTTAATTTAATCTATTTAATTAAATTAATTGAATTAAAACTATAGGTTATGTGAGAGATGTTCATTTAAATATGATTTAAATGAATTGGTTAATTAAATTAGATTTAATTAATCATTAATTATTAATTTAATTAATATTAAATTAGTAGTAACTCCCACGTAGGGGAGTTTGGGATAACACCCACGTTTCCCATTTTCTCTCGCTTCCTTATATGGCATCTAACATAAAAGAATTAAATGGTTCATTGTCTCAACAAAAAATTCTCTGCCTTTTTTTCCCTTGCCAAAAAGGTTCCCACAAACCTTTCCTCAAGATTCAGAGAAAAGGAAGGTCTCCAAATGGTGGTGACACGTAAGTTTTTTCTTCTTTCATTTTTTTTTTTTTTTGTATTCTATATGCTTAACCTATATTATTTTAAGTTTTTTTTTTTTACCAATGTAGAAGTATTTAAAAAAAAATATAAAATTAATTTTGAGATAGGGTTCTGATATGTTTCCGCTGCGCTTGAGTTTTAATCCCAACAAGAACATGTTGGGTATAGAGTATGCTCTAGGATACATGTCTCATCGACTTTAGTGCAAGTGGGAGATTGTTGGGATTTGTGCCCTAAAGTTTCGTAATTTATTAGTTGATTAATTTAATTATTAATTATACAATATTAATTTATCCATTAACCATAAAAATCCAAGGTTATTATATGAAATCTTGAACATGTATGTAGTTGACATACGGGTGGATCATGTTCAAGAAATAACCTAAAGGTCTATAGTATATGGTGTTGGACCGGTATGGCAACCTAGAGGGGGTGAATAGAGTTTAATTAAACTTTTTAAGAAATATGCTCAATTTAAACTAATTAAATACTTTTTAAAATAAATTAATAAAAACCCTAAATGATGTCAAATAACAAAATTGATAGAAAGTATGTAATAATAAACTCAATTAATCTCAACCAACAAAAGCATGCAATTAAAATTAAATGCAAAAATAATTAGGGAAGAGTTAAAGAAAAAGACACCGTAATTTTTATAGTGGTTCGGTTAAACTCGACCTACATCCACTTTCCCAAGCGCCTCTCGGGATTTCGATTAAAAAATCTTCTTTTGACTCTTTCCACGGATGAGAGCTGAACCGCTACCTTGCTCCTTTTTTAGGTTCAAGAGCAAACCCGATCCTTTTCACGGGTTAGGATCAAACCGTTACAATTTTGTTGAAAGCTTTAAATCACACAATAAAACTCTCTAAAAGAGTGGGTATACAAATTTGAGCTCACACACTTTAATCCCCACAATACAATGAAAATTTCTCTCAAGAATAAGATGAAAAGAATAAAAAATTGGAAGCTTGGAGAGAGAGCAACAATGGTGGCATTTTGCTAATTTTGAGAATTGAGTAGTGTGAAAAAGTTGAAACAATTTTGGGAAGATAAAGTTTAAAAAGAGAGGAAAGTTGGCTAAAAAATTGAATTTGAGTTTGATCCATTGAATTGTGTAAAAAGCAAATTGAGTGGTTGAGATTAAAAGTAAAAAAGTAATTTTCTTTTTAATTTTAAAATCAATTAGCTGTTAGACACAAACATATATAATATTAAATTCATTTACTTTAAAAACAACTAGTCATTAGACACACACATATATATATAATATTAAATTCAATTCTTTTTAAAATCATTTTTTTTATTATTTTCAAAATCAATATCTTTTAGTTTTATTAAAATCCACCAATTATAGAATAAAGTCCCTTGTGTCACTCCCTCTATGGCTCCAAGTGACACTCCTTAATTAGTCTAATTTGATGATTAATTTGGCCACGTCACCACCTCGGTATTTTTTCGTTAACTTTATTTCGACGATAACTTCTTCGTTTGAACTCCAATTTGGGTGATTCAAGAAGCATCGGAATCGTTGTTCAGAGCTCTAGGCTATGCACTATTCAAAATAATAAAATTGTTAGTAAAAAAAATTAGGTTTGTTATCATCAAAACATTAATTAAAATTAAATTAATTTGAGATTAAGGGCCAAAAAGCCAACATATGGATAGGGTTGGGTGCCTTATCCTGGTAACACTATGGATATGGTCCACTTTGTAATAGTTACAAATGGTTTGATATAAACCATTCGTGTGGAGACATGTGAGTAGGGGTATCCTATACAAAGAGTTTGTATAAGACTAGATCGCGAAATATTTAATCTCTCTTTGTAAATCCGTTAATTGATGAGATTAATATTTAATAAGATGATCATATGCGACTTGATCTTAATCTTGAATGACTTATGAACTCCTGTCTATGAGGTCAGTCCTTTGATTTGCACGAGCGAGAGTGACCCGAGTTGCCGACTCAATAAGCCTACCATTTTGGGGACTAGACTAAATGGAGAGTTGAGAACATAAACTTCACAAGACGGAATTCACTCCTTCCCGCATAGGGTAAGTAGATGAGTAGTTCCCTTAAGTGCTGATTTTGGGTCTTGAACAAGGGGTCCCACCCTCTCACTGGCCCGAGAGGGACTTAGTTTATGGTTGGATCATAAACAAATTGTTCATTAGAGGAATCAGTGGTACTTAAGGAAAATAGGTAATTACAGGGGTAAAACAGACATTTGACCCAGCTATAATTATGAACAACTTGTGAAGGATCGACTTGCTTATATTGATTATATCCATGGACACAACTTGTTCTATAGTGCATAAGAGTTCAACTATAGGTCTATAGTGGTTTGCCTTGTAGTTAATGAATTAATATTAAATTAATTAAAGAGTTTAATTAATTAATCTTGGATTATTGAAACTTATAATCTGTAGGTCCATAAAGTCCCTTTGCTAGCTCACCACGGACCAAGAACGATCAATTATGTTGAAAGAAAAGTTTGAAATGTTCAAATTTATGAGGGAAAATATTAATAGTATTGGATACACAATTTAATTACATGATTTATTATAAAGTTTATTTGAATGAGATTCAAATTATAACTTTATAATATGGAGAATTAATTTATTTGAATATGATTCAAATAATTAGTTATTTATTTGGATGAGATTCATATAAATAAATAAATTATTTAATTTGAATAAGATTCGAATTAAATAGATAATGAGAGAATTAATTTATTTGAATATAATTTAAATAATTAAGTTATTTGGATGAGATCCATATAATAAAGTTATTTAATTTAAATAAGATTTGAATTAAATAATTAGAGAGAAAATTAATTAATTTGAATGGGGTTCAAATAATTAATTATTTAATTTGGATGAGATTCAAATTAAAGATTCTACATGAAATAAATATTTAAATATGATTTAAATATTTAAACTATTTAATATGAGATATTATTTGGGTAGATATTTAATAATATTAGATATTATTAAATATTTAATTTAAAAATGTGAGCAAAGGGTTATCCTAATAGGATTAGGAATAACCTATAGAGTTCTATAAATAGAGCCCTTGAGAGCTCTCATAGACTACAATCTCTACAATTACTCTAAGAAAATTCTTTTCTCATTCTCTTTATTCTTTTTAGAAGCGGATTAGAAGAATTCAAGGAGGAGAGGAGACTACCGATACGAGAAGATTTTTCTACATTTGTAGACGACAAATGTATGATGTTTAACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTGCTTATTTGTATTTTTAATTCTTTTAAGAAATCAAATAACGTGATCACACACTTCCTTTCCTAAATTTAACAAACTCAAAATAATAATAATAATAATAAAAAGATAAATTTTGTTTAATAACAAGAATATTAGTAAATTAATTACTTAAAAAACTAGAAACAATTTGACTTGTTTAAACCATTGACAACTTCATTGATAGGTCTACAATTTGAATCTCTACCACTTGAAATTACTAACAAACTAAATTATTAAACTAAAGAAAACATGAAGTAACTACAAAACCAAATTAAAAATTAGAACAAAAAATAAAAAACACATGATTGAAAACATAATTAAGAAAAGTAACTAATTTTAGTCCGACAATTAAAACTAAATCACCCATAAACACGGCAAACGACAATCATGTTGGAATCCAAAAGGATTCCACAATAAATTTCGTGGGTAAAAGAAGTCAAACAGAATTGTTTTGATCCATTTTTATCCATGTTTTTTTCATTCTGCATATTTATGACGTCAGCCACCCTCTAATCCACAAAATTAAACAAAACAAACTAAACTCCCCACAGAATTAACACTCTGAAAATTCATCTATTTTATTTTATCTATTTATTTATTTATTAACAGACAACAGGATCACTTCAAGATTTGTCCACGTCAGATCATTAATTATCACCATCGGTACTTACGTGTAGTAGCTGATCATAACCCCTTTGTCCATCTGTCATTTTCTTCCTCTATTTAATCCCTAAGTCAGCCCCCAAAAGTTCATAGCAAAAAAAAAAAATTAACATTCAAACAAACAAAAAAGAAAAAAAAAAGAAAAAACAAAGAAATTGAGAAAATTTCTGAAAAATTTGATGGCCAGAATTATCGTTTCAACCCAATCAAAGATCCCCAAGGTATTTTTCTACGCTTTCAATCGCTCGTTGAACACCGCCGCCTCCTCATCCGCTGCCGCCTTCACCGCCGCCGCCACCTCTCCACCGCCACCCCTCAATCTCTCCGACTCTCCGGCCACCCCCACCGTTGATTTTACCGACACAAGGTCCCTCTTTGGGTCTCTTTCCACGTCGGAGCTCCTACGCGCCGCCGCCAACCTCCATGCCGCCGCCATCGGCCCCGTCGTTGACGTCGGAATGTGGGTTATGAATTCTAAATTGATGGACGTTGAGGTGATTCGTGATGTGGTTTTGGGTACCGTTAAGCATACTTTTTACCAACATTTTTGCGCCGGTGAGGACGACGCGGCCGTCGCGAAAACCGTTCGACGGTTGCACGATGTCGGGTTGAGAAGTATGCTTGATTACGCTCTCGAATACGCCGACGACGAAGCGTCGTGTGATCGGAATCTCTACGGTTTTCTTCAAACCATCGAGGCAACTAAATCGCTCCCACCGGGCTCGGTAAGTACTTCTTGA

mRNA sequence

ATGAGCCATAAAATCAAACTTGTTGGGAGTTATATAGTAGTTACAATCCATTCACTACTTGACACGTGCAATGCCACAAGTAAACAACAGGATCACTTCAAGATTTGTCCACGTCAGATCATTAATTATCACCATCGAATTATCGTTTCAACCCAATCAAAGATCCCCAAGGTATTTTTCTACGCTTTCAATCGCTCGTTGAACACCGCCGCCTCCTCATCCGCTGCCGCCTTCACCGCCGCCGCCACCTCTCCACCGCCACCCCTCAATCTCTCCGACTCTCCGGCCACCCCCACCGTTGATTTTACCGACACAAGGTCCCTCTTTGGGTCTCTTTCCACGTCGGAGCTCCTACGCGCCGCCGCCAACCTCCATGCCGCCGCCATCGGCCCCGTCGTTGACGTCGGAATGTGGGTTATGAATTCTAAATTGATGGACGTTGAGGTGATTCGTGATGTGGTTTTGGGTACCGTTAAGCATACTTTTTACCAACATTTTTGCGCCGGTGAGGACGACGCGGCCGTCGCGAAAACCGTTCGACGGTTGCACGATGTCGGGTTGAGAAGTATGCTTGATTACGCTCTCGAATACGCCGACGACGAAGCGTCGTGTGATCGGAATCTCTACGGTTTTCTTCAAACCATCGAGGCAACTAAATCGCTCCCACCGGGCTCGGTAAGTACTTCTTGA

Coding sequence (CDS)

ATGAGCCATAAAATCAAACTTGTTGGGAGTTATATAGTAGTTACAATCCATTCACTACTTGACACGTGCAATGCCACAAGTAAACAACAGGATCACTTCAAGATTTGTCCACGTCAGATCATTAATTATCACCATCGAATTATCGTTTCAACCCAATCAAAGATCCCCAAGGTATTTTTCTACGCTTTCAATCGCTCGTTGAACACCGCCGCCTCCTCATCCGCTGCCGCCTTCACCGCCGCCGCCACCTCTCCACCGCCACCCCTCAATCTCTCCGACTCTCCGGCCACCCCCACCGTTGATTTTACCGACACAAGGTCCCTCTTTGGGTCTCTTTCCACGTCGGAGCTCCTACGCGCCGCCGCCAACCTCCATGCCGCCGCCATCGGCCCCGTCGTTGACGTCGGAATGTGGGTTATGAATTCTAAATTGATGGACGTTGAGGTGATTCGTGATGTGGTTTTGGGTACCGTTAAGCATACTTTTTACCAACATTTTTGCGCCGGTGAGGACGACGCGGCCGTCGCGAAAACCGTTCGACGGTTGCACGATGTCGGGTTGAGAAGTATGCTTGATTACGCTCTCGAATACGCCGACGACGAAGCGTCGTGTGATCGGAATCTCTACGGTTTTCTTCAAACCATCGAGGCAACTAAATCGCTCCCACCGGGCTCGGTAAGTACTTCTTGA

Protein sequence

MSHKIKLVGSYIVVTIHSLLDTCNATSKQQDHFKICPRQIINYHHRIIVSTQSKIPKVFFYAFNRSLNTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTDTRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQHFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPGSVSTS

Homology

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BLAST of Lsi03G002100 vs. ExPASy Swiss-Prot
Match: P92983 (Proline dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=POX1 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 5.9e-33
Identity = 80/162 (49.38%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 68  NTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTDTRSLFGSLSTSELLRAAANLHAA 127
           +TA      +F   A  PP         +   +D +D   LF S+ TS+LLR+ A LHAA
Sbjct: 31  STAVVPEILSFGQQAPEPPLHHPKPTEQSHDGLDLSDQARLFSSIPTSDLLRSTAVLHAA 90

Query: 128 AIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQHFCAGEDDAAVAKTVRRLHD-VG 187
           AIGP+VD+G WVM+SKLMD  V R +VLG VK TFY HFCAGED  A A+ VR +++  G
Sbjct: 91  AIGPMVDLGTWVMSSKLMDASVTRGMVLGLVKSTFYDHFCAGEDADAAAERVRSVYEATG 150

Query: 188 LRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPGSVST 229
           L+ ML Y +E+ADD  SCD N+  F++TIEA KSLP    S+
Sbjct: 151 LKGMLVYGVEHADDAVSCDDNMQQFIRTIEAAKSLPTSHFSS 192

[Close]

BLAST of Lsi03G002100 vs. ExPASy Swiss-Prot
Match: Q6NKX1 (Proline dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=POX2 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.1e-30
Identity = 72/156 (46.15%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 79  TAAATSPP----PPLNLSDSPATPT-VDFTDTRSLFGSLSTSELLRAAANLHAAAIGPVV 138
           T +   PP    P +   D P     +D +D   LF S+  S LLR+ A LHA +IGP+V
Sbjct: 16  TVSPVGPPTTIIPEILSFDQPKPEVDLDLSDQARLFASVPISTLLRSTAILHATSIGPMV 75

Query: 139 DVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQHFCAGEDDAAVAKTVRRLHD-VGLRSMLD 198
           D+G W+M+SKLMD  V RD+VL  VK TFY HFCAGED AA A+ V  +++  GL+ ML 
Sbjct: 76  DLGSWLMSSKLMDTTVTRDLVLRIVKGTFYDHFCAGEDAAAAARRVSSVYESTGLKGMLV 135

Query: 199 YALEYADDEASCDRNLYGFLQTIEATKSLPPGSVST 229
           Y +E+A+D  +CD N+  F++T+EA K+LP   +S+
Sbjct: 136 YGVEHAEDGGACDENIQKFIETVEAAKTLPSSHLSS 171

[Close]

BLAST of Lsi03G002100 vs. ExPASy Swiss-Prot
Match: O45228 (Proline dehydrogenase 1, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=prdh-1 PE=2 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 32/97 (32.99%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 100 VDFTDTRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVK 159
           + F +T+  F S S +EL+RA   L    I  +V+    ++N+  M   + +++   T+K
Sbjct: 59  LSFENTKEAFKSKSNTELVRALVVLRLCGIQTLVNQNQIILNT--MRRVLGKNLFKKTLK 118

Query: 160 HTFYQHFCAGEDDAAVAKTVRRLHDVGLRSMLDYALE 197
           +TF+ HF AGE +  V   V +L + G++S+LDY++E
Sbjct: 119 NTFFGHFVAGETEEEVRHVVEKLRNYGVKSILDYSVE 153

[Close]

BLAST of Lsi03G002100 vs. ExPASy Swiss-Prot
Match: Q04499 (Proline dehydrogenase 1, mitochondrial OS=Drosophila melanogaster OX=7227 GN=slgA PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 5.7e-04
Identity = 30/97 (30.93%), Postives = 51/97 (52.58%), Query Frame = 0


Query: 100 VDFTDTRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVK 159
           V F D  + F S +T EL+RA       +   +V+  M +M  KL    + + + +  +K
Sbjct: 116 VSFNDPIAAFKSKTTGELIRAYLVYMICSSEKLVEHNMTLM--KLARNLLGQKLFVLLMK 175

Query: 160 HTFYQHFCAGEDDAAVAKTVRRLHDVGLRSMLDYALE 197
            +FY HF AGE+   +   + RL   G++ +LDY++E
Sbjct: 176 SSFYGHFVAGENRHTIVPALERLRSFGVKPILDYSVE 210

[Close]

BLAST of Lsi03G002100 vs. ExPASy Swiss-Prot
Match: Q9WU79 (Proline dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Prodh PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 7.5e-04
Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 95  PATPTVDFTDTRSLFGSLSTSELLRAAANLHAAAIGPVV---DVGMWVMNSKLMDVEVIR 154
           P  P VDFT+T+  + S  + EL+R    L   A  PV+      ++ +  KL+   +  
Sbjct: 47  PPVPAVDFTNTQEAYRSRRSWELVRNLLVLRLCA-SPVLLAHHEQLFQVARKLLGQRMFE 106

Query: 155 DVVLGTVKHTFYQHFCAGEDDAAVAKTVRRLHDVGLRSMLDYALE 197
            +    +K TFY HF AGED  ++   +R     G+  +LDY +E
Sbjct: 107 RL----MKMTFYGHFVAGEDQESIRPLIRHNKAFGVGFILDYGVE 146

[Close]

BLAST of Lsi03G002100 vs. ExPASy TrEMBL
Match: A0A6J1FGN7 (Proline dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111445322 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.9e-73
Identity = 144/183 (78.69%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 46  RIIVSTQSKIPK-VFFYAFNRSLNTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTD 105
           R I+STQSKIPK VFFYAFNR LNTAASSSAAAFT+AA++PPP LNL+ SPA PTVDF+D
Sbjct: 3   RSILSTQSKIPKNVFFYAFNRLLNTAASSSAAAFTSAASTPPPHLNLAVSPAAPTVDFSD 62

Query: 106 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 165
           T++LFGSLST E+L AAA+LH AA+GPVVDVGMWVMNSKLMDVE+ RDV+ GTV+H+FY+
Sbjct: 63  TKALFGSLSTLEVLHAAASLHVAAVGPVVDVGMWVMNSKLMDVELARDVIFGTVRHSFYR 122

Query: 166 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 225
           HFCAGEDD AV KTVRRLH+VGLRSMLDYA+EYA+DE SCDRNL+GFL+TIEAT+ LP G
Sbjct: 123 HFCAGEDDTAVGKTVRRLHNVGLRSMLDYAIEYANDEESCDRNLHGFLRTIEATRVLPRG 182

Query: 226 SVS 228
           S S
Sbjct: 183 SAS 185

[Close]

BLAST of Lsi03G002100 vs. ExPASy TrEMBL
Match: A0A0A0KXN4 (Proline dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G643300 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 5.1e-72
Identity = 149/183 (81.42%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 48  IVSTQSKIPK-VFFYAFNRSLNTAASSSAAAFTA--AATSPPPPLNLSDSPATPTVDFTD 107
           IVSTQSKI K VFFY FNR LNTAASS AAAFTA  A TSPP PL+L + P+TPTVDFTD
Sbjct: 5   IVSTQSKISKRVFFYVFNRPLNTAASSPAAAFTAATATTSPPSPLHL-NPPSTPTVDFTD 64

Query: 108 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 167
           +R+LFGS+ TS+LL A A LHAAA+GPVVDVGMWVMNSKLMDVE+ RDVVLGTVKH+FY+
Sbjct: 65  SRALFGSIPTSDLLHATATLHAAAVGPVVDVGMWVMNSKLMDVELFRDVVLGTVKHSFYR 124

Query: 168 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 227
           HFCAGEDD +VAKTVRRLHDVGLRSMLDYALEYADDEASCDRNL GFL T+EATKSLP G
Sbjct: 125 HFCAGEDDTSVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLDGFLSTVEATKSLPSG 184

[Close]

BLAST of Lsi03G002100 vs. ExPASy TrEMBL
Match: A0A6J1E6Q2 (Proline dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111431296 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71
Identity = 147/183 (80.33%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 46  RIIVSTQSKIPKVFF-YAFNRSLNTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTD 105
           R I++TQSK PK FF Y F+R LNTAASS AAAFTAAA S   PLN + SPATPT+DFTD
Sbjct: 3   RRILATQSKTPKRFFLYTFDRLLNTAASSPAAAFTAAAAS-ASPLNHTGSPATPTIDFTD 62

Query: 106 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 165
           T +LFGSLST ELLRAAANLH AA+GPVVD G+W+MNSKLMDVE+IRD +LG+VKHTFY+
Sbjct: 63  TSALFGSLSTLELLRAAANLHLAAVGPVVDAGIWIMNSKLMDVELIRDAILGSVKHTFYR 122

Query: 166 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 225
           HFCAGEDDAAV KTVRRLHDVGLRSMLDYALEYADDE SCDRNL GFL+TIEATKSLPPG
Sbjct: 123 HFCAGEDDAAVRKTVRRLHDVGLRSMLDYALEYADDEESCDRNLDGFLKTIEATKSLPPG 182

Query: 226 SVS 228
           S S
Sbjct: 183 SAS 184

[Close]

BLAST of Lsi03G002100 vs. ExPASy TrEMBL
Match: A0A5D3BNA9 (Proline dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002050 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.9e-71
Identity = 147/183 (80.33%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 46  RIIVSTQSKIPK-VFFYAFNRSLNTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTD 105
           R +VSTQSKI K VF Y FNR LNTAASS AAAFTA    PPPPL+L + P+TPTVDFTD
Sbjct: 3   RALVSTQSKISKRVFLYVFNRPLNTAASSPAAAFTA----PPPPLHL-NPPSTPTVDFTD 62

Query: 106 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 165
           +R+LFGS+ TS+LL A A LHA+AIGPVVDVGMWVMNSKLMDVE+ RDVVLGTVKHTFY+
Sbjct: 63  SRALFGSIPTSDLLHATATLHASAIGPVVDVGMWVMNSKLMDVELFRDVVLGTVKHTFYR 122

Query: 166 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 225
           HFCAGEDD +VAKTVRRLHDVGLRSMLDYALEYADDEASCDRNL GFL+T+EATKSLP G
Sbjct: 123 HFCAGEDDTSVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLDGFLRTVEATKSLPSG 180

Query: 226 SVS 228
           S S
Sbjct: 183 SAS 180

[Close]

BLAST of Lsi03G002100 vs. ExPASy TrEMBL
Match: A0A1S3CBE9 (Proline dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103498577 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.9e-71
Identity = 147/183 (80.33%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 46  RIIVSTQSKIPK-VFFYAFNRSLNTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTD 105
           R +VSTQSKI K VF Y FNR LNTAASS AAAFTA    PPPPL+L + P+TPTVDFTD
Sbjct: 3   RALVSTQSKISKRVFLYVFNRPLNTAASSPAAAFTA----PPPPLHL-NPPSTPTVDFTD 62

Query: 106 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 165
           +R+LFGS+ TS+LL A A LHA+AIGPVVDVGMWVMNSKLMDVE+ RDVVLGTVKHTFY+
Sbjct: 63  SRALFGSIPTSDLLHATATLHASAIGPVVDVGMWVMNSKLMDVELFRDVVLGTVKHTFYR 122

Query: 166 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 225
           HFCAGEDD +VAKTVRRLHDVGLRSMLDYALEYADDEASCDRNL GFL+T+EATKSLP G
Sbjct: 123 HFCAGEDDTSVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLDGFLRTVEATKSLPSG 180

Query: 226 SVS 228
           S S
Sbjct: 183 SAS 180

[Close]

BLAST of Lsi03G002100 vs. NCBI nr
Match: XP_038891036.1 (proline dehydrogenase 2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 302.8 bits (774), Expect = 2.6e-78
Identity = 160/183 (87.43%), Postives = 168/183 (91.80%), Query Frame = 0


Query: 46  RIIVSTQSKIP-KVFFYAFNRSLNTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTD 105
           R IVSTQSKIP KVFFY FNRSLNTAASSSAAAFTAAATSPP PLNL +SP TPTVDFTD
Sbjct: 3   RTIVSTQSKIPKKVFFYVFNRSLNTAASSSAAAFTAAATSPPLPLNL-NSPTTPTVDFTD 62

Query: 106 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 165
           TR+LFGSL TS+LL AA  LHAAAIGPVVDVGMWVMNSKLMDVE++RD+VLGTVKHTFY+
Sbjct: 63  TRALFGSLPTSDLLHAATTLHAAAIGPVVDVGMWVMNSKLMDVELVRDLVLGTVKHTFYR 122

Query: 166 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 225
            FCAGEDDA VAKTVRRLHDVGLRSMLDYALEYADDEASCDRNL GFL+TIE TKSLPPG
Sbjct: 123 QFCAGEDDATVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLDGFLRTIEITKSLPPG 182

Query: 226 SVS 228
           S S
Sbjct: 183 SAS 184

[Close]

BLAST of Lsi03G002100 vs. NCBI nr
Match: XP_023551146.1 (proline dehydrogenase 2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.7 bits (740), Expect = 2.3e-74
Identity = 148/184 (80.43%), Postives = 168/184 (91.30%), Query Frame = 0


Query: 46  RIIVSTQSKIPK-VFFYAFNRSLNTAASSSAAAFT-AAATSPPPPLNLSDSPATPTVDFT 105
           R I+STQSKIPK VFFYAFNR LNTAASSSAAAFT AA+T PPPPLNL+ SPA PTVDF+
Sbjct: 3   RSILSTQSKIPKNVFFYAFNRLLNTAASSSAAAFTSAASTPPPPPLNLAVSPAAPTVDFS 62

Query: 106 DTRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFY 165
           DT++LFGSLST E+L AAA+LH AA+GPVVDVGMWVMNSKLMDVE+ RDV+ GTV+H+FY
Sbjct: 63  DTKALFGSLSTLEVLHAAASLHVAAVGPVVDVGMWVMNSKLMDVELARDVIFGTVRHSFY 122

Query: 166 QHFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPP 225
           +HFCAGEDD AV KTVRRLHDVGLRSMLDYA+EYA+DE SCDRNL+GFL+TIEAT++LPP
Sbjct: 123 RHFCAGEDDTAVGKTVRRLHDVGLRSMLDYAIEYANDEESCDRNLHGFLRTIEATRALPP 182

Query: 226 GSVS 228
           GS S
Sbjct: 183 GSAS 186

[Close]

BLAST of Lsi03G002100 vs. NCBI nr
Match: KAG6578518.1 (Proline dehydrogenase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.6 bits (727), Expect = 7.3e-73
Identity = 144/183 (78.69%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 46  RIIVSTQSKIPK-VFFYAFNRSLNTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTD 105
           R I+STQSKIPK VFFYAFNR LNTAASSSAAAFT+AA++PPP LNL+ SPA PTVDF+D
Sbjct: 3   RSILSTQSKIPKNVFFYAFNRLLNTAASSSAAAFTSAASTPPPHLNLAVSPAAPTVDFSD 62

Query: 106 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 165
           T++LFGSLST E+L AAA+LH AA+GPVVDVGMWVMNSKLMDVE+ RDV+ GTV+H+FY+
Sbjct: 63  TKALFGSLSTLEVLHAAASLHVAAVGPVVDVGMWVMNSKLMDVELARDVIFGTVRHSFYR 122

Query: 166 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 225
           HFCAGEDD AV KTVRRLH+VGLRSMLDYA+EYA+DE SCDRNL+GFL+TIEAT++LP G
Sbjct: 123 HFCAGEDDTAVGKTVRRLHNVGLRSMLDYAIEYANDEESCDRNLHGFLRTIEATRALPRG 182

Query: 226 SVS 228
           S S
Sbjct: 183 SAS 185

[Close]

BLAST of Lsi03G002100 vs. NCBI nr
Match: XP_022939392.1 (proline dehydrogenase 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-72
Identity = 144/183 (78.69%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 46  RIIVSTQSKIPK-VFFYAFNRSLNTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTD 105
           R I+STQSKIPK VFFYAFNR LNTAASSSAAAFT+AA++PPP LNL+ SPA PTVDF+D
Sbjct: 3   RSILSTQSKIPKNVFFYAFNRLLNTAASSSAAAFTSAASTPPPHLNLAVSPAAPTVDFSD 62

Query: 106 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 165
           T++LFGSLST E+L AAA+LH AA+GPVVDVGMWVMNSKLMDVE+ RDV+ GTV+H+FY+
Sbjct: 63  TKALFGSLSTLEVLHAAASLHVAAVGPVVDVGMWVMNSKLMDVELARDVIFGTVRHSFYR 122

Query: 166 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 225
           HFCAGEDD AV KTVRRLH+VGLRSMLDYA+EYA+DE SCDRNL+GFL+TIEAT+ LP G
Sbjct: 123 HFCAGEDDTAVGKTVRRLHNVGLRSMLDYAIEYANDEESCDRNLHGFLRTIEATRVLPRG 182

Query: 226 SVS 228
           S S
Sbjct: 183 SAS 185

[Close]

BLAST of Lsi03G002100 vs. NCBI nr
Match: XP_004141603.2 (proline dehydrogenase 2, mitochondrial [Cucumis sativus] >KGN52551.1 hypothetical protein Csa_008665 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 149/183 (81.42%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 48  IVSTQSKIPK-VFFYAFNRSLNTAASSSAAAFTA--AATSPPPPLNLSDSPATPTVDFTD 107
           IVSTQSKI K VFFY FNR LNTAASS AAAFTA  A TSPP PL+L + P+TPTVDFTD
Sbjct: 5   IVSTQSKISKRVFFYVFNRPLNTAASSPAAAFTAATATTSPPSPLHL-NPPSTPTVDFTD 64

Query: 108 TRSLFGSLSTSELLRAAANLHAAAIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQ 167
           +R+LFGS+ TS+LL A A LHAAA+GPVVDVGMWVMNSKLMDVE+ RDVVLGTVKH+FY+
Sbjct: 65  SRALFGSIPTSDLLHATATLHAAAVGPVVDVGMWVMNSKLMDVELFRDVVLGTVKHSFYR 124

Query: 168 HFCAGEDDAAVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPG 227
           HFCAGEDD +VAKTVRRLHDVGLRSMLDYALEYADDEASCDRNL GFL T+EATKSLP G
Sbjct: 125 HFCAGEDDTSVAKTVRRLHDVGLRSMLDYALEYADDEASCDRNLDGFLSTVEATKSLPSG 184

[Close]

BLAST of Lsi03G002100 vs. TAIR 10
Match: AT3G30775.1 (Methylenetetrahydrofolate reductase family protein )

HSP 1 Score: 142.5 bits (358), Expect = 4.2e-34
Identity = 80/162 (49.38%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 68  NTAASSSAAAFTAAATSPPPPLNLSDSPATPTVDFTDTRSLFGSLSTSELLRAAANLHAA 127
           +TA      +F   A  PP         +   +D +D   LF S+ TS+LLR+ A LHAA
Sbjct: 31  STAVVPEILSFGQQAPEPPLHHPKPTEQSHDGLDLSDQARLFSSIPTSDLLRSTAVLHAA 90

Query: 128 AIGPVVDVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQHFCAGEDDAAVAKTVRRLHD-VG 187
           AIGP+VD+G WVM+SKLMD  V R +VLG VK TFY HFCAGED  A A+ VR +++  G
Sbjct: 91  AIGPMVDLGTWVMSSKLMDASVTRGMVLGLVKSTFYDHFCAGEDADAAAERVRSVYEATG 150

Query: 188 LRSMLDYALEYADDEASCDRNLYGFLQTIEATKSLPPGSVST 229
           L+ ML Y +E+ADD  SCD N+  F++TIEA KSLP    S+
Sbjct: 151 LKGMLVYGVEHADDAVSCDDNMQQFIRTIEAAKSLPTSHFSS 192

[Close]

BLAST of Lsi03G002100 vs. TAIR 10
Match: AT5G38710.1 (Methylenetetrahydrofolate reductase family protein )

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-31
Identity = 72/156 (46.15%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 79  TAAATSPP----PPLNLSDSPATPT-VDFTDTRSLFGSLSTSELLRAAANLHAAAIGPVV 138
           T +   PP    P +   D P     +D +D   LF S+  S LLR+ A LHA +IGP+V
Sbjct: 16  TVSPVGPPTTIIPEILSFDQPKPEVDLDLSDQARLFASVPISTLLRSTAILHATSIGPMV 75

Query: 139 DVGMWVMNSKLMDVEVIRDVVLGTVKHTFYQHFCAGEDDAAVAKTVRRLHD-VGLRSMLD 198
           D+G W+M+SKLMD  V RD+VL  VK TFY HFCAGED AA A+ V  +++  GL+ ML 
Sbjct: 76  DLGSWLMSSKLMDTTVTRDLVLRIVKGTFYDHFCAGEDAAAAARRVSSVYESTGLKGMLV 135

Query: 199 YALEYADDEASCDRNLYGFLQTIEATKSLPPGSVST 229
           Y +E+A+D  +CD N+  F++T+EA K+LP   +S+
Sbjct: 136 YGVEHAEDGGACDENIQKFIETVEAAKTLPSSHLSS 171

The following BLAST results are available for this feature:

BLAST of Lsi03G002100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92983	5.9e-33	49.38	Proline dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=POX1 P...	[more]
Q6NKX1	6.1e-30	46.15	Proline dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=POX2 P...	[more]
O45228	1.9e-07	32.99	Proline dehydrogenase 1, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=prdh...	[more]
Q04499	5.7e-04	30.93	Proline dehydrogenase 1, mitochondrial OS=Drosophila melanogaster OX=7227 GN=slg...	[more]
Q9WU79	7.5e-04	31.43	Proline dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Prodh PE=1 SV...	[more]

BLAST of Lsi03G002100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGN7	7.9e-73	78.69	Proline dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111445322 PE=3 SV=1	[more]
A0A0A0KXN4	5.1e-72	81.42	Proline dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G643300 PE=3 SV=1	[more]
A0A6J1E6Q2	1.5e-71	80.33	Proline dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111431296 PE=3 SV=1	[more]
A0A5D3BNA9	1.9e-71	80.33	Proline dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]
A0A1S3CBE9	1.9e-71	80.33	Proline dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103498577 PE=3 SV=1	[more]

BLAST of Lsi03G002100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891036.1	2.6e-78	87.43	proline dehydrogenase 2, mitochondrial-like [Benincasa hispida]	[more]
XP_023551146.1	2.3e-74	80.43	proline dehydrogenase 2, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
KAG6578518.1	7.3e-73	78.69	Proline dehydrogenase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022939392.1	1.6e-72	78.69	proline dehydrogenase 2, mitochondrial-like [Cucurbita moschata]	[more]
XP_004141603.2	1.1e-71	81.42	proline dehydrogenase 2, mitochondrial [Cucumis sativus] >KGN52551.1 hypothetica...	[more]

BLAST of Lsi03G002100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G30775.1	4.2e-34	49.38	Methylenetetrahydrofolate reductase family protein	[more]
AT5G38710.1	4.3e-31	46.15	Methylenetetrahydrofolate reductase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.220		coord: 139..228 e-value: 2.7E-13 score: 51.5
None	No IPR available	PANTHER	PTHR13914:SF20	PROLINE DEHYDROGENASE	coord: 55..227
IPR015659	Proline oxidase family	PANTHER	PTHR13914	PROLINE OXIDASE	coord: 55..227
IPR029041	FAD-linked oxidoreductase-like	SUPERFAMILY	51730	FAD-linked oxidoreductase	coord: 169..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G002100.1	Lsi03G002100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010133	proline catabolic process to glutamate
biological_process	GO:0006562	proline catabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0071949	FAD binding
molecular_function	GO:0004657	proline dehydrogenase activity