Lsi03G000940 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G000940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein starmaker-like isoform X1
Location	chr03: 1362720 .. 1368072 (-)
RNA-Seq Expression	Lsi03G000940
Synteny	Lsi03G000940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCAATCTACTTTTCATATGTAAAGGAGCCATCTATACAATTATTCCAACTTTCCCTCCCTTTTCTATTCGATTTCGCCCATTCCCATGCGATTCGGCGGGATCCTCTGCTTCCATGGACTTCAATTGAACTGAACCGTTCCCCATTCGAAATTCGAAGGATCTGAGAACTTAAGCTAAAAACCGAGCAACAATGGTGTCTCGGTCTTCCGACAAGGATGTCAAAGAACAGCTTTTGGAAGCTGGCAATAAGATTGTTGACCCCCTTACTTCAGTTGAAGAACTTCTACCTCTTCTCGACGTAAGCCCTTCCGTTTTCTTCTCTATGTTTTTCAGCCGGTTGAATTTTCCGAGGGATTTTGTTTTACTGAATTGGCTTTTCAACCTGCTAGAATGCTGTCTTTGAATTTTCTTTTGCTATACCTTTCACGCTGATACTTAATATATCTGAAGCTTTAGATTTCAAGTAGCACAACTTAAATTAGAAGATAATTTGGTTTGCATCTATTCAAGTTTACTGGAATGATACTGTTGGATAGGCTGACATATTATAACTCCACATTGAGCTGGTGGCTGGCAATATCACTTTTGGTGGTCTGGAAAGTAATGCGAATGTCTGAAAACTGTTAAGGAGGGAATTGATTGAGATTATGTGAATGTTTGAAAACTAGTGAGGAGGGGATTACTTCGAGGAATGTGGATAATGGGTCCTAATGTAATGACGGTTCATGCTGTTAAGACTAGTCAGGCAGTTCAGTATCTCTTAAGATTTCTAACTGTGACTTTTAAATCTGTCTTTCAGTTTGATTCTTTGAACTGCACATTAAATGTTTAATGGGGTACTTTCCCACCTCATTTTTTTTTTTACCCTGCTAATGTAGTTATTCTCCCTCTTCTCTTCCCTTTCTTCTGGTGAGTTGAAATATAATGGAATATTAGCAGCTATGCCTTCTAGGTCCTTGGTATTTATTTACTTATTTATTTTTGTCTATATGGATTTTAATTTTTGTGGGTAGCACTTTTCATGTTTCTTTAACTTCACAATAATCTGCCTGATTGCAGAAAATTGAGAGTTTGCTGGCAAAAGTTGAACAATCCCCTTCAAAATCAGTGCAAATTGCGCTCACTCCATCACTGAAAGCCCTGGTTTCTGATCAGCTTCTAAAGCATTCGGATATTGATGTCAAAGTTTCAGTTGCTGCATGTATTAGTGAAATAACTAGGATCACTGCACCTGTTGCCCCTTACAGTGACGAACAAATGAAGGTAATTAGAAATTTGCTCTTTGAGTTGGTACAATGTCAATTTCCCACTTATCAAATTTACTTCTGAAGAGATGAATATATGCTGCTGTTCAGGAGGTGTTTCATCTTATAGTATCATCCTTTGAAGATCTCTCTGACAAGTCAAGTCGATCATATGCAAAGAGGGTATCGATTCTTGAAACCGTTGCAAAGGTCAGATCATGTGTGGTCATGCTGGATTTGGAATGTGATGCATTGATCATCGAGATGTTCCAACATTTCCTTAAGACAGTAAGGTATCATACTAGATTTTCTTTTGAAATCAAATTCCTTTTAAATTTTTACTTATAGGAGCACAGTTGTGATAACTATTAATTTTCCCACAATTCAAGTTCTTTTGTGAACAAATAGAATTTGTTTCTCAATGAAATACTACTTAGACTTCTGTACTTCATCAGAAATTGACTTATACCGGAGAACATGAGCAAAAAAAAGCAAAGTATGGATCATTATATTGGGTGTTTTGAATGATATATAGCAGTGGTATTTGAGTGCATTTGAAGGATTAGCAAGAAAAACTCGATTAAAAATATAATGCAGTGAATTAGTTGACTGTAATGTAATAAGTTTGGTTTTTAACTATTGTCTGTTAATTAGGTTTCATTTGTTGAATCCTTGTTAATTAGTGTCATGGGCTGGTAGTTGGGTTGGTTAGTAGGCAAACTTTAGAAATAAAGGAGTGTCGTTGTATTTTCAAGGCTTCTTATATGGAATAGAGTTTTCTTTGGTTGTTCCTGAGTTGTAGATGCTGCGCTGCACTAAGTTAGGTATTTCAGTGAGAAAAGGAAATGCTTGCAAGGATGGCAACAAGTAAGAATCTGGCTTTTATGGGAATGGAAAGTTCCTTTTTCTAGCTTTGCATGGTAGTGCTCATTCAGCACAGTCTCCTTCCTTTGGAGGATTTTCCTGACAACCATGACAACAAGAAGCATGGGAGGCTGCAAAGTATCACTCAAAATTTAACTCATCAGATTGATAGTAAGATTGCAAAAGGAAAAACTTTTGGATTTTGCCAAAAAATTTGAAAGTCGTAAAATTTTCAATGACTTGGAGTTCTTGATAGAGGCTTAGGCATTTGTGTTCAATAAATGAGAAATGATGCATGAGTTTGAATGTCTTCCTCATGGATATTCAAGTGTTGACCAAACTTCTGATTTTATCAGTACTCAAAGCATTCAAGTGAATGATTCTTAGGCAGCACTGGATTTTAAAAATAATTCAATTGGAGATGACACTTTAATGGAATGGGATGGAAAATATGGTTTATGTTCTGTGGATCATCTGCTGGAGCCACAATTCAGTGGATACAGTGTCTAATTCACAAGAAACCTCTCAGACTTGGACGGGGGAAGGAATTCTTTCTTTCCTTTGATGAATATGTTGGTGAAGATGAACATGAGATGCTGTCTGTTTAAGGAGAGTTCTCCATGAATTTTTATGAACCTTTTTCTGAAAAAGAGAGTTCTTGTCTTCGTATGTATGAGTTTCATTTGAAACAATCAAAGTTTTAGCTGTGATTTTTCATCCCCAACATTTTCCCAGCATGATAATTCAATGATGAATGATTTTGTCAACAAAGTTGACATAAGCAAAGAAGGATTTTCGATGGCTCTTTTGATGGGCTATCATGGAATCTTAGTCAGGAGCGTATTGGCTTTTTAAGTCTAATACATTGTATTTTATCAGTGCCCTACAAGCTTGGAAATCAAATTTATGGGCTGGTTGTTCCATAGAAAAATCCTTCAATCTTATACGCGTGTTTTAACAAGCTTATAAAAACATTAAGGTATTGATATAGTGAAATTTCAGCCTTTTGAGCTCTTTGTTTCCTATCTAGGCTTTTCTTCACATCTTAAGCTCAAGGACAGTACATTGGATTAGTTGGATAGCATTATAATAAGTTTTAGACTTTCAATTCTTTGGTTGTAGTTGATTAGTATTTTTAAATCACCACTTAGCCCAAAAAGCATAGGCGAACGGGTTATGATTAATTTAATTATATCAATACTTTAATAGCCTCCACTCGTGGGCATGAAAATTTGTAGAAGGTCCAACAAGTGAAATCAATATTAATTGGAGGGTGACATTACATGGGTTTGAACACATAACCTCCTGCTCTGATATCATGTTATTTTTGGAGTAAATCCTTTTTCTCCTTGTACAAAGAACCCAAGAATGGGTAAATATTATGCAACAAGTGAAATTCCTATTGGAAACTAATAATAAAAGGAAAAAAATAATTAAAAGATAAAACACTAATATTTTAATTTAAACACAAATCTACAATTTCAGTTGGTTGTTTATTGTGTTGGGCATACTTTTTGGTTTGGTTGAGTTGGTTGGAAGGGAACTTCCACAAATTGGGGGAATTGGGAGGGTCTATTGCATTTTCAACACTTCTTTGAACGGAATGGAGTTGCTTTAGTTGTTCTTAGTCTAGATGCTTGGCTGCATTAAAATACATGCACATAATTGTTATTTTGCAACATGTTGCCTATAATTGTTATTGGAATAGAGCTGCGAGCATAATGAGCGATAAAAATCTGATAGGAGGTTAAGCATAAGTTCATAACTTGTAATGATGTCTTGACATATTGCTCGCTGTGCCAATTCTTTTAATTAGTTGCTGATAATTTGAAGTTAAGATGACAGCAGTAACAATAGCTCTTTCCTGGTGTTCGCAGAGTAAAAGTTGATGTGATTGATATTTATAATGGCAAGTGAAAGATTTACAAAAGCAAATTTCTGATACTCAAAACAATGTTTTTGGCAATTAATTTCTGATTAAACAGTCCACCGAACTTTCTCTGATTTGATCTCATTTAGGTCTAGCATTTTCCTTCTGATAGTTTGCTTCTATTTTTTCCTAATAGTTTAGTTGAACACCTTTATTTTCCTTTTTGTTCTTGTTCTGATTAGTGAGGACTTAGCAGGTTTTATTTTGCCAAGTTGGAAGTTCTAATTTTCGAAACTTTGGTTTCCAATATGTTGTTAAGTTTTTTAACAGTGTTCTTCACCCAGAGATTATCACCCAGAGAATATATTTGCATCAATGGAGACAATTATGAGCCTTGTTTTAGAAGAAAGTGAAGATAGGGCTGTAGGGCTCCTCTCTCCTATCTTAGAAAGTGTGAAGAGACAATGGGGTAATGTGCTTTGAGTTGTTATTTGTTCCCTTTCTCTCTCTCTTTTAATTATTAATATTTTCAACCTTGATTGTCTGTTGAATCTTATAACATGATTACAGGAAATTCTACCTATTGCTCGGAAATTAGGAGAGAGAGTTCTTGATAACTTTTCTACCAAACTCAAAGCTTATTTGGTTCAAGCTGTAAAGACCTCGGGAATTTCTTTTGATGATTATAGTGATGTTGTTGGTTCCATATACAAAGATCTTTCTGGCTCTGTTGAGCCTAGTAATCTTCACGATGATGGTGAAAACATGGTAAGTTCTTAAATAATTGTTAGTTGAGTATTTTTAACAATTTATTCTAAGGTTGTGGTGCTATTTAAGTCTTTTTAATAGTCCATCCCATTTGCGCACCTCCTAATGTTGAGCATTGTACAAATGAGATTCTATATCTGCTATGACTTGGTATCATTATAAAAATGAAGATCTGTAGGTCTTCTCTCCGTTATTTGCTGGGCAGACCAGTGATTAAAATCTTTTATAATATTTGCAACCGTGTCAAACGTTTATCCCATGCAAATCTGCCATGGATACAATCTTTGATTCCCATGTTTAAAATTTATAGGATACGTGATTTGCTATATTGAATTTTCTATGAGTTTCTGTATTATAGAGGTTGGGTTTTTTTAGCTTGAGATTCTGGTTGTTGAAATATTATTCAATGCCCAAGGGTCAGCATATAAGATAAATTTAACCTCGGCGGAAGTGATCTTTATGTGATTATGACATCTTCTTTTGAATTTGAATTTTATGTAATGGTTTTTGCATTTTTCTCTGTTGATACTTTGTGCAGGTTGCTGAGACCATGTCAGCTAGAACGTATGAGGATGAGGAAATGCAACCATGCAATGCTTCTTAA

mRNA sequence

ACCCAATCTACTTTTCATATGTAAAGGAGCCATCTATACAATTATTCCAACTTTCCCTCCCTTTTCTATTCGATTTCGCCCATTCCCATGCGATTCGGCGGGATCCTCTGCTTCCATGGACTTCAATTGAACTGAACCGTTCCCCATTCGAAATTCGAAGGATCTGAGAACTTAAGCTAAAAACCGAGCAACAATGGTGTCTCGGTCTTCCGACAAGGATGTCAAAGAACAGCTTTTGGAAGCTGGCAATAAGATTGTTGACCCCCTTACTTCAGTTGAAGAACTTCTACCTCTTCTCGACTTATTCTCCCTCTTCTCTTCCCTTTCTTCTGGTGAGTTGAAATATAATGGAATATTAGCAGCTATGCCTTCTAGGTCCTTGAAAATTGAGAGTTTGCTGGCAAAAGTTGAACAATCCCCTTCAAAATCAGTGCAAATTGCGCTCACTCCATCACTGAAAGCCCTGGTTTCTGATCAGCTTCTAAAGCATTCGGATATTGATGTCAAAGTTTCAGTTGCTGCATGTATTAGTGAAATAACTAGGATCACTGCACCTGTTGCCCCTTACAGTGACGAACAAATGAAGGAGGTGTTTCATCTTATAGTATCATCCTTTGAAGATCTCTCTGACAAGTCAAGTCGATCATATGCAAAGAGGGTATCGATTCTTGAAACCGTTGCAAAGGTCAGATCATGTGTGGTCATGCTGGATTTGGAATGTGATGCATTGATCATCGAGATGTTCCAACATTTCCTTAAGACAGAAATTCTACCTATTGCTCGGAAATTAGGAGAGAGAGTTCTTGATAACTTTTCTACCAAACTCAAAGCTTATTTGGTTCAAGCTGTAAAGACCTCGGGAATTTCTTTTGATGATTATAGTGATGTTGTTGGTTCCATATACAAAGATCTTTCTGGCTCTGTTGAGCCTAGTAATCTTCACGATGATGGTGAAAACATGGTTGCTGAGACCATGTCAGCTAGAACGTATGAGGATGAGGAAATGCAACCATGCAATGCTTCTTAA

Coding sequence (CDS)

ATGGTGTCTCGGTCTTCCGACAAGGATGTCAAAGAACAGCTTTTGGAAGCTGGCAATAAGATTGTTGACCCCCTTACTTCAGTTGAAGAACTTCTACCTCTTCTCGACTTATTCTCCCTCTTCTCTTCCCTTTCTTCTGGTGAGTTGAAATATAATGGAATATTAGCAGCTATGCCTTCTAGGTCCTTGAAAATTGAGAGTTTGCTGGCAAAAGTTGAACAATCCCCTTCAAAATCAGTGCAAATTGCGCTCACTCCATCACTGAAAGCCCTGGTTTCTGATCAGCTTCTAAAGCATTCGGATATTGATGTCAAAGTTTCAGTTGCTGCATGTATTAGTGAAATAACTAGGATCACTGCACCTGTTGCCCCTTACAGTGACGAACAAATGAAGGAGGTGTTTCATCTTATAGTATCATCCTTTGAAGATCTCTCTGACAAGTCAAGTCGATCATATGCAAAGAGGGTATCGATTCTTGAAACCGTTGCAAAGGTCAGATCATGTGTGGTCATGCTGGATTTGGAATGTGATGCATTGATCATCGAGATGTTCCAACATTTCCTTAAGACAGAAATTCTACCTATTGCTCGGAAATTAGGAGAGAGAGTTCTTGATAACTTTTCTACCAAACTCAAAGCTTATTTGGTTCAAGCTGTAAAGACCTCGGGAATTTCTTTTGATGATTATAGTGATGTTGTTGGTTCCATATACAAAGATCTTTCTGGCTCTGTTGAGCCTAGTAATCTTCACGATGATGGTGAAAACATGGTTGCTGAGACCATGTCAGCTAGAACGTATGAGGATGAGGAAATGCAACCATGCAATGCTTCTTAA

Protein sequence

MVSRSSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKIESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQHFLKTEILPIARKLGERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAETMSARTYEDEEMQPCNAS

Homology

[Close]

BLAST of Lsi03G000940 vs. ExPASy Swiss-Prot
Match: Q04264 (Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDS5 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-12
Identity = 38/99 (38.38%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 90  ALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVSSFEDLSDKSS 149
           ALVS +LLKH D+ ++   A C+S+I R+ AP APY+D Q+ ++F L++S FE L D+ +
Sbjct: 58  ALVSRKLLKHKDVGIRAFTACCLSDILRLYAPDAPYTDAQLTDIFKLVLSQFEQLGDQEN 117

Query: 150 RSYAKRVSILETVAKVRSCVVMLDL-ECDALIIEMFQHF 188
             + ++  ++  + + RS V++ DL   + L+IE+F  F
Sbjct: 118 GYHIQQTYLITKLLEYRSIVLLADLPSSNNLLIELFHIF 156

[Close]

BLAST of Lsi03G000940 vs. ExPASy Swiss-Prot
Match: Q5U241 (Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis OX=8355 GN=pds5b-b PE=2 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08
Identity = 35/97 (36.08%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 91  LVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY-SDEQMKEVFHLIVSSFEDLSDKSS 150
           L SD  LKH D DV++ VA C+++I RI AP APY S +++K++F  I    + L D  S
Sbjct: 63  LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKS 122

Query: 151 RSYAKRVSILETVAKVRSCVVMLDLE-CDALIIEMFQ 186
             + +   +LE +A V+S  +  +LE C+ +  ++++
Sbjct: 123 PQFNRYFYLLENIAWVKSYNICFELEDCNEIFTQLYR 159

[Close]

BLAST of Lsi03G000940 vs. ExPASy Swiss-Prot
Match: Q9HFF5 (Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pds5 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.1e-08
Identity = 48/200 (24.00%), Postives = 93/200 (46.50%), Query Frame = 0


Query: 23  DPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKIESLLAKVEQSPSKSVQI 82
           +PLT+ E L  L DL    +SLS   +  + +L                           
Sbjct: 16  NPLTTSEILKRLRDLLGELTSLSQDTIDRDSVL--------------------------- 75

Query: 83  ALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVSSFE 142
              P  ++LV++ LL H D  ++     CI E+ R+ AP AP++  Q++++F +I+    
Sbjct: 76  ---PVARSLVNNNLLHHKDKGIRSYTLCCIVELLRLCAPDAPFTLSQLEDIFQVILKILS 135

Query: 143 DLSDKSSRSYAKRVSILETVAKVRSCVVMLDL-ECDALIIEMFQHFLKTEILPIARKLGE 202
            L ++ S  Y +   ILE+++ V+S V+++DL   +  ++ +F+ F       +ARK   
Sbjct: 136 GLMNQESTYYPQIYEILESLSNVKSAVLIVDLPNAEEFLVNIFRLF-----FDLARKGTT 180

Query: 203 RVLDNFSTKLKAYLVQAVKT 222
           + ++ +   +   L+  + T
Sbjct: 196 KNVEFYMLDIINQLINEINT 180

[Close]

BLAST of Lsi03G000940 vs. ExPASy Swiss-Prot
Match: Q498H0 (Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis OX=8355 GN=pds5b-a PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.9e-08
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 91  LVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY-SDEQMKEVFHLIVSSFEDLSDKSS 150
           L SD  LKH D DV++ VA C+++I RI AP APY S +++K++F  I    + L D  S
Sbjct: 63  LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKS 122

Query: 151 RSYAKRVSILETVAKVRSCVVMLDLE 176
             + +   +LE +A V+S  +  +LE
Sbjct: 123 PQFNRYFYLLENIAWVKSYNICFELE 148

[Close]

BLAST of Lsi03G000940 vs. ExPASy Swiss-Prot
Match: Q5F3U9 (Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus OX=9031 GN=PDS5B PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 72  VEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY-SDEQM 131
           ++Q   +  ++ L  +L  L SD  LKH D DV++ VA C+++I RI AP APY S +++
Sbjct: 45  MDQDSEEEKELYLNLALH-LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKL 104

Query: 132 KEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLE 176
           K++F  I    + L D  S  + +   +LE +A V+S  +  +LE
Sbjct: 105 KDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELE 148

[Close]

BLAST of Lsi03G000940 vs. ExPASy TrEMBL
Match: A0A6J1KAT2 (protein starmaker-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491697 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 3.2e-92
Identity = 206/309 (66.67%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLA+VEQSPSKS+Q ALTPSLKAL+SDQLL+HSDIDVKV+VA CISEITRITAP AP
Sbjct: 63  IESLLARVEQSPSKSMQSALTPSLKALISDQLLRHSDIDVKVAVATCISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFSSMETIMSLVLEESEDIAVELLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           ERVLDN STKLK YLVQAVK+ GISFDDYSD++ SI KDLSGS+EPSNL+D GEN+VAE+
Sbjct: 243 ERVLDNCSTKLKPYLVQAVKSLGISFDDYSDIIASICKDLSGSLEPSNLNDAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. ExPASy TrEMBL
Match: A0A6J1K1Y9 (protein starmaker-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491697 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 3.2e-92
Identity = 206/309 (66.67%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLA+VEQSPSKS+Q ALTPSLKAL+SDQLL+HSDIDVKV+VA CISEITRITAP AP
Sbjct: 63  IESLLARVEQSPSKSMQSALTPSLKALISDQLLRHSDIDVKVAVATCISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFSSMETIMSLVLEESEDIAVELLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           ERVLDN STKLK YLVQAVK+ GISFDDYSD++ SI KDLSGS+EPSNL+D GEN+VAE+
Sbjct: 243 ERVLDNCSTKLKPYLVQAVKSLGISFDDYSDIIASICKDLSGSLEPSNLNDAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. ExPASy TrEMBL
Match: A0A6J1HDP8 (protein starmaker-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462578 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.6e-91
Identity = 205/309 (66.34%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAG+KIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGDKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLA+VEQSPSKS+Q ALTPSLKAL+SDQLL+HSDIDVKV+VAACISEITRITAP AP
Sbjct: 63  IESLLARVEQSPSKSMQSALTPSLKALISDQLLRHSDIDVKVAVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFSSMETIMSLVLEESEDIAVDLLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           ERVLDN STKLK YLVQAVK+ GI FDDYSD++ SI KDLSGS+EPSNL+D GEN+VAE+
Sbjct: 243 ERVLDNCSTKLKPYLVQAVKSLGICFDDYSDIIASICKDLSGSLEPSNLNDAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. ExPASy TrEMBL
Match: A0A6J1HBT1 (protein starmaker-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462578 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.6e-91
Identity = 205/309 (66.34%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAG+KIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGDKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLA+VEQSPSKS+Q ALTPSLKAL+SDQLL+HSDIDVKV+VAACISEITRITAP AP
Sbjct: 63  IESLLARVEQSPSKSMQSALTPSLKALISDQLLRHSDIDVKVAVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFSSMETIMSLVLEESEDIAVDLLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           ERVLDN STKLK YLVQAVK+ GI FDDYSD++ SI KDLSGS+EPSNL+D GEN+VAE+
Sbjct: 243 ERVLDNCSTKLKPYLVQAVKSLGICFDDYSDIIASICKDLSGSLEPSNLNDAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. ExPASy TrEMBL
Match: A0A1S3BC85 (protein starmaker OS=Cucumis melo OX=3656 GN=LOC103488346 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.0e-90
Identity = 205/299 (68.56%), Postives = 215/299 (71.91%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLAKVEQSPS S+Q+ALTPSLKALVSDQLL+HSDIDVKVSVAACISEITRITAP AP
Sbjct: 63  IESLLAKVEQSPSISMQVALTPSLKALVSDQLLRHSDIDVKVSVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LS+KSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSEKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHF KT                                            EILPIARKLG
Sbjct: 183 QHFFKTIRDYHPENVFSSMETIMSLVLEESEDMAVGLLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAE 260
           ERVL+N STKLK YLVQAVKT GISFDDYSDVV SI KDLSGS+EPSNLHD GEN+V E
Sbjct: 243 ERVLNNCSTKLKPYLVQAVKTLGISFDDYSDVVASICKDLSGSLEPSNLHDAGENVVEE 274

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: XP_038884574.1 (titin homolog [Benincasa hispida])

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-95
Identity = 214/309 (69.26%), Postives = 224/309 (72.49%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLAKVEQSPSKS+Q ALTPSLKALVSDQLL+HSDIDVKV+VAACISEITRITAP AP
Sbjct: 63  IESLLAKVEQSPSKSMQTALTPSLKALVSDQLLRHSDIDVKVAVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFTSMETIMSLVLEESEDMAVGLLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           E+VLDN STKLK YLVQAVKT GISFDDYSDVV SI KDLSGS+EPSNLHD GEN+VAE+
Sbjct: 243 EKVLDNCSTKLKPYLVQAVKTLGISFDDYSDVVASICKDLSGSLEPSNLHDAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: XP_023545878.1 (E3 ubiquitin-protein ligase RBBP6-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-92
Identity = 207/309 (66.99%), Postives = 223/309 (72.17%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLA+VEQSPSKS+Q ALTPSLKAL+SDQLL+HSDIDVKV+VAACISEITRITAP AP
Sbjct: 63  IESLLARVEQSPSKSMQSALTPSLKALISDQLLRHSDIDVKVAVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFSSMETIMSLVLEESEDIAVDLLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           ERVLDN STKLK YLVQAVK+ GISFDDYSD++ SI KDLSGS+EPSNL++ GEN+VAE+
Sbjct: 243 ERVLDNCSTKLKPYLVQAVKSLGISFDDYSDIIASICKDLSGSLEPSNLNNAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: XP_023545879.1 (E3 ubiquitin-protein ligase RBBP6-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-92
Identity = 207/309 (66.99%), Postives = 223/309 (72.17%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLA+VEQSPSKS+Q ALTPSLKAL+SDQLL+HSDIDVKV+VAACISEITRITAP AP
Sbjct: 63  IESLLARVEQSPSKSMQSALTPSLKALISDQLLRHSDIDVKVAVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFSSMETIMSLVLEESEDIAVDLLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           ERVLDN STKLK YLVQAVK+ GISFDDYSD++ SI KDLSGS+EPSNL++ GEN+VAE+
Sbjct: 243 ERVLDNCSTKLKPYLVQAVKSLGISFDDYSDIIASICKDLSGSLEPSNLNNAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: XP_022996453.1 (protein starmaker-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 348.2 bits (892), Expect = 6.5e-92
Identity = 206/309 (66.67%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLA+VEQSPSKS+Q ALTPSLKAL+SDQLL+HSDIDVKV+VA CISEITRITAP AP
Sbjct: 63  IESLLARVEQSPSKSMQSALTPSLKALISDQLLRHSDIDVKVAVATCISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFSSMETIMSLVLEESEDIAVELLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           ERVLDN STKLK YLVQAVK+ GISFDDYSD++ SI KDLSGS+EPSNL+D GEN+VAE+
Sbjct: 243 ERVLDNCSTKLKPYLVQAVKSLGISFDDYSDIIASICKDLSGSLEPSNLNDAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: XP_022996452.1 (protein starmaker-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 348.2 bits (892), Expect = 6.5e-92
Identity = 206/309 (66.67%), Postives = 221/309 (71.52%), Query Frame = 0


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLA+VEQSPSKS+Q ALTPSLKAL+SDQLL+HSDIDVKV+VA CISEITRITAP AP
Sbjct: 63  IESLLARVEQSPSKSMQSALTPSLKALISDQLLRHSDIDVKVAVATCISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 182

Query: 185 QHFLKT--------------------------------------------EILPIARKLG 244
           QHFLKT                                            EILPIARKLG
Sbjct: 183 QHFLKTVRDYHPENVFSSMETIMSLVLEESEDIAVELLSPILESVKKDNEEILPIARKLG 242

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 270
           ERVLDN STKLK YLVQAVK+ GISFDDYSD++ SI KDLSGS+EPSNL+D GEN+VAE+
Sbjct: 243 ERVLDNCSTKLKPYLVQAVKSLGISFDDYSDIIASICKDLSGSLEPSNLNDAGENVVAES 284

[Close]

BLAST of Lsi03G000940 vs. TAIR 10
Match: AT4G31880.1 (LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781 proteins in 2973 species: Archae - 289; Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants - 6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI BLink). )

HSP 1 Score: 235.7 bits (600), Expect = 4.4e-62
Identity = 143/274 (52.19%), Postives = 173/274 (63.14%), Query Frame = 0


Query: 6   SDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKI 65
           SDK+++ Q++EAG K++DP +S++ELL  LD   LF S                      
Sbjct: 4   SDKELENQIIEAGEKLIDPPSSLDELLSFLD--KLFVS---------------------- 63

Query: 66  ESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY 125
              LA+VEQSP  S+Q ALTP +K LV  +L KHSD+DVKV+VAACISEITRITAP APY
Sbjct: 64  ---LAEVEQSPPDSMQNALTPLMKGLVGGKLFKHSDVDVKVAVAACISEITRITAPDAPY 123

Query: 126 SDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQ 185
            D+QMKEVF LIVSSFEDL DKSSRSYAKR+SILETVAKVRSCVVMLDLECDAL+IEMFQ
Sbjct: 124 DDDQMKEVFKLIVSSFEDLVDKSSRSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQ 183

Query: 186 HFLKT-------------------------------------------EILPIARKLGER 237
           HFLK                                            EI  ++R+L E+
Sbjct: 184 HFLKAIRDHHSGNVFSSMENIMTLVLEESEDIPSEMLSPILHSVKKDDEISQVSRRLAEQ 243

[Close]

BLAST of Lsi03G000940 vs. TAIR 10
Match: AT4G31880.2 (LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). )

HSP 1 Score: 235.7 bits (600), Expect = 4.4e-62
Identity = 143/274 (52.19%), Postives = 173/274 (63.14%), Query Frame = 0


Query: 6   SDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKI 65
           SDK+++ Q++EAG K++DP +S++ELL  LD   LF S                      
Sbjct: 4   SDKELENQIIEAGEKLIDPPSSLDELLSFLD--KLFVS---------------------- 63

Query: 66  ESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY 125
              LA+VEQSP  S+Q ALTP +K LV  +L KHSD+DVKV+VAACISEITRITAP APY
Sbjct: 64  ---LAEVEQSPPDSMQNALTPLMKGLVGGKLFKHSDVDVKVAVAACISEITRITAPDAPY 123

Query: 126 SDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQ 185
            D+QMKEVF LIVSSFEDL DKSSRSYAKR+SILETVAKVRSCVVMLDLECDAL+IEMFQ
Sbjct: 124 DDDQMKEVFKLIVSSFEDLVDKSSRSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQ 183

Query: 186 HFLKT-------------------------------------------EILPIARKLGER 237
           HFLK                                            EI  ++R+L E+
Sbjct: 184 HFLKAIRDHHSGNVFSSMENIMTLVLEESEDIPSEMLSPILHSVKKDDEISQVSRRLAEQ 243

[Close]

BLAST of Lsi03G000940 vs. TAIR 10
Match: AT1G15940.1 (Tudor/PWWP/MBT superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 104/242 (42.98%), Postives = 139/242 (57.44%), Query Frame = 0


Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           +ESLLA VEQ  S SVQ AL P ++ALVS  LL++ D DV+VSV +C++EI RITAP AP
Sbjct: 40  MESLLATVEQDLSSSVQKALHPPMRALVSADLLRNPDSDVRVSVVSCLTEIMRITAPEAP 99

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMK++F + + +FE L+D SSRSY K   ILETVAKVRS +VMLDLECD L++EMF
Sbjct: 100 YNDEQMKDIFQVTIEAFEKLADASSRSYRKAEVILETVAKVRSSLVMLDLECDDLVLEMF 159

Query: 185 QHFLK--------------------------------------------TEILPIARKLG 244
           Q FLK                                             ++ P A  L 
Sbjct: 160 QRFLKIIRPDHPQLVLVSMETIMITVIDESEEVPMDLLEILLTTVKKDSQDVSPAALTLV 219

Query: 245 ERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAET 263
           E+VL + + KL+  +++A+K+SG S D YS VV SI +    + +  N     +N   E 
Sbjct: 220 EKVLSSCTCKLQPCIMEALKSSGTSLDMYSPVVSSICQSEFATTQAHNDVKPKDNEADEK 279

[Close]

BLAST of Lsi03G000940 vs. TAIR 10
Match: AT1G80810.1 (Tudor/PWWP/MBT superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34
Identity = 87/201 (43.28%), Postives = 116/201 (57.71%), Query Frame = 0


Query: 80  VQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVS 139
           +Q AL PS  ALVS  LL H D DV+VSV +C++EI RITAP  PYSD+ MKE+F L + 
Sbjct: 1   MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60

Query: 140 SFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQHFLK---------- 199
           +FE L+D SSRSY K   +L+ VAKV+SC+VMLDLEC  LI++MF++F K          
Sbjct: 61  AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120

Query: 200 -------------------TEIL---------------PIARKLGERVLDNFSTKLKAYL 237
                              T++L               P++  L E+VL   + KLK Y+
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180

[Close]

BLAST of Lsi03G000940 vs. TAIR 10
Match: AT1G80810.2 (Tudor/PWWP/MBT superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34
Identity = 87/201 (43.28%), Postives = 116/201 (57.71%), Query Frame = 0


Query: 80  VQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVS 139
           +Q AL PS  ALVS  LL H D DV+VSV +C++EI RITAP  PYSD+ MKE+F L + 
Sbjct: 1   MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60

Query: 140 SFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQHFLK---------- 199
           +FE L+D SSRSY K   +L+ VAKV+SC+VMLDLEC  LI++MF++F K          
Sbjct: 61  AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120

Query: 200 -------------------TEIL---------------PIARKLGERVLDNFSTKLKAYL 237
                              T++L               P++  L E+VL   + KLK Y+
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180

The following BLAST results are available for this feature:

BLAST of Lsi03G000940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04264	1.8e-12	38.38	Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae (strain ATCC ...	[more]
Q5U241	1.6e-08	36.08	Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis OX=8355 GN=...	[more]
Q9HFF5	6.1e-08	24.00	Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
Q498H0	7.9e-08	39.53	Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis OX=8355 GN=...	[more]
Q5F3U9	1.4e-07	35.24	Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus OX=9031 GN=PDS...	[more]

BLAST of Lsi03G000940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAT2	3.2e-92	66.67	protein starmaker-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491697 PE...	[more]
A0A6J1K1Y9	3.2e-92	66.67	protein starmaker-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491697 PE...	[more]
A0A6J1HDP8	1.6e-91	66.34	protein starmaker-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462578 ...	[more]
A0A6J1HBT1	1.6e-91	66.34	protein starmaker-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462578 ...	[more]
A0A1S3BC85	1.0e-90	68.56	protein starmaker OS=Cucumis melo OX=3656 GN=LOC103488346 PE=4 SV=1	[more]

BLAST of Lsi03G000940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884574.1	2.2e-95	69.26	titin homolog [Benincasa hispida]	[more]
XP_023545878.1	1.3e-92	66.99	E3 ubiquitin-protein ligase RBBP6-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023545879.1	1.3e-92	66.99	E3 ubiquitin-protein ligase RBBP6-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022996453.1	6.5e-92	66.67	protein starmaker-like isoform X2 [Cucurbita maxima]	[more]
XP_022996452.1	6.5e-92	66.67	protein starmaker-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Lsi03G000940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31880.1	4.4e-62	52.19	LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED D...	[more]
AT4G31880.2	4.4e-62	52.19	LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 gro...	[more]
AT1G15940.1	1.1e-39	42.98	Tudor/PWWP/MBT superfamily protein	[more]
AT1G80810.1	3.9e-34	43.28	Tudor/PWWP/MBT superfamily protein	[more]
AT1G80810.2	3.9e-34	43.28	Tudor/PWWP/MBT superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12663:SF3	TRANSCRIPTIONAL REGULATOR	coord: 5..190
None	No IPR available	PANTHER	PTHR12663:SF3	TRANSCRIPTIONAL REGULATOR	coord: 190..269
IPR039776	Sister chromatid cohesion protein Pds5	PANTHER	PTHR12663	ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED	coord: 190..269 coord: 5..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G000940.1	Lsi03G000940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0007064	mitotic sister chromatid cohesion
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus