Lsi03G000680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G000680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Magnesium transporter
Location	chr03: 968110 .. 972422 (-)
RNA-Seq Expression	Lsi03G000680
Synteny	Lsi03G000680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATGATGATGTGGAGTGCCCTCTCCCTTTGGATAAGCAGATTGCTGATGGTAAGTTATACACTTTAGAATTTAAATTATTACATTCACGATTTTCATCAGCCTTGATTTCATTGTTCAATTTTTTTTTTTTTTAATGATATTTTATTGAACTTTTTATCTGCAGAAGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGGTAATTTTGATATTAGATAAGCCACCTTCCGTACTTCTGAAGAACAAACTATAAATATGGAAATAGAAAATTTTTACTGTCTATTAACGATAGACCGCGATAAAATTCTATCGCGTTGATAGACAGCGATAAAATTCTATCGTTTGAGCGATAGACTTTAACAATAAAATTGTTGATAGACAATGAAATTTTTCTGTATTATACTTTTTCTGTTTATGGAGAAATTTATTTGGAAGAATAGAGAAACTGCAAAAATATGCCGGGAATCTTTGGAAGTGGTCTCGTCAATGTTTCCTACCGTCAGCAGTAGTCTTTGACAGCCCCCTCTTCTGTGATTCACAAGAAAAATTTATATGATGCCCTTTCTTGTGATGCCTAGAATCACGAGGGCAATAATCTAAACTCAGCCAATTAGATACATTGGCATTGCGATTTATTTGATATTCCAAATCTGGGATACTCATTTATAGAACTGAAATCAAAGGTTTAGAGGTAAAAAATAATAGAAAAAAACATTTGGTCCCGGAACTTGCTTTTAATGCCCACACTCGTGTACTTTCAAATTTAACAATTTAAACTTGTACTTCAATAAAGACTAAATCATTACGAACCGAATTTAAACCAAGGGATGGTAGTCTTGTTTATTTTATTTCTATGTTATTCCTTATGGGTCATCATCATATTTGAGATGGATTTTATTTACTGGAATTGAAACACCTTCAAACTAACTGTTGTATTTAGTTGCGCTATTATTTGACCAGCCCAAATAATGTGTTATCTTATTCACGAGTTTGTGGAATGAACCGTGCAAGTTGATGGAATTTTATTTGTCTGCATCTGCAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCAATTGCTGTAAATTTGAGGTCTAAACAACCTTCTTACATTTACCTGTTAAATGGTTTCTTCTGCTTGTATGTTTATTTCTCCTACTTTTAATTAGCTCGCGGCGACTAGAGGTTAGCAGAGTGGAATTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGTATGTCCTTTTATAGATATCATGAACATTCAATTGGTAAATCTTTCTTGAACCGAAGGTATCAACTTCGAATGGAATATTGTGCTGAAGAGATCTAAATCATTCTCATTTACCATTAAGGAAGCTTTATATGCTGAGGAGAAAAAAAGAAAAAAGATCTGAAAGCAAAGATCAAATCTAACCTAGGTAACTTCGCTGATAAAAAAGCCAGATAAGGCATTAAAGGAAATTACAATAGCAGCCGGAAGAAAATAGGGCGACAGTTAGCAATACCTACAAAATACTCAAGTCAATTACCATACCTTTCGAAACTAATCTATAAAAAGAAAAAATTCATTCCGGAAAAATTGAAAGAATACATATGACAGATACCCTAACAAAAGGGGGCAACCAAACTAACGATACTAAAAAATGCTCCTATTTTGGCAGTAGCCTAAGAGAAAGAGAACCTAACTAAAAAAAAAAGAAGCTCCAATCCAAGATAACGGTTAGCAGACACTTACAAAAATCCTTGAAAATTTTGAAAATTGTTGACCAAATAAAAATATTATATCCAGAGACCAAACCTCTTCTCAAGATCTATCAAAATCTTTAAAAGTGATGTATAAATCCAAAGGCTTCAAAGAGTTGCGAAAAGAAAAGCCAGCCTGCCAAATGGGGCGGATGTTCAATGACCTCCTCTACCTTAACCTATTTATTGGTGGAGACAGCATTAGTTTGTCCGAAAAATCAAGTAACCTCACTTCATAGTCTTTAAAAATATTTAAAGATACATGGCAACTCTTCATCTCAAAATATAGAATCCTTAGTATCTAATATGGTATCGAGTCTATTAAATTCAGACAGCACATTCAATGATGAACAAAAAAAAAGCACTATCTTGAGGAATAAATTGAGGATTCCACATCGAAAAAATCGATCATAATCTTTAAAAGATATGTAGACTACTCTTTGTTGTCAATATTCTTTGTTGTCAATATTAATTTTGAGATGAAACTATACATTAACTTTTTTGTACAACCAACTAGTCTTCCTCTGATTGCCTCCTAATGTCAAGCCTAACCTAGCAGTAAGAATAAGAGGAATATAGCAAAAGAATCAAACTGTTGCTAGCTGCAGTTTATTCCAGTAATAGAACACAAGTAAATTATTTTCGATCCCGAAGCAAATTCAAGCAAGATTTTCTTCTTCTAATAGAGTCTGGGCTGAGTCACTAGCAAAATTTTGAGTAAGAAAATGCAGTCAAGCTGCTTCTAAACATGTTGCATGGATAACTTCAACGAAAGAATTTCTTTCCAATTGTCCTTTAGCCTTTTTTTTTCACATCCATTTTGCAGGAATATTCGGAATGAACTTACGATCATACCTTGAAGAACACGTGGTACATTCTCTAAAAGCCAATTCTTAAACAATCTTCAAGTTCATGCAACGTGGTCAATTGTCTTGATTTTGTGTGAGTTGTAACTTTGATGCACTTGTCATGATGCATGCAGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGTTGGCGCTGTCGTGGCATTCTTTCTCATGTATTCATATCTCAGAGCTAGGAGAATCCTATAGCTAAATACTTGTTCAGGTAGAAACAATCACCTAGCCAATGAATTGCAATAACATTGTATTAAACTTCTCCAACTTCTGACTTATAATGCTTATTTTTAGGGAAAAAAAAACTTTTTGATTTATTGGTTTTGGGTTATTTTGTCCCTAAATTTAGAAACGTTACACTTTTATTCCTTAAATTTTGAGTTTGATTCTAACTTAGTCCTTAGGTTTCAAAATGTTAAAATTTACACTTTTTAACTTCAATTTTTCACTAAATACCTTAGCCATTTTTACAGTCTTCGGTGTTAATATCTATTAATTAATTAAAAATAATTATGAAGTTAAAATTTAAAATTAATTATAATAGTGATGTAGGGAAACTTGAGGATTAAGTGTATAACATTTTGAAACATGAGGACCAAATGGAAATTAGAGTCAGAGTATTTATTTCATTATTTTATTATCTCAACTTCCAAATACTATATAATCTTTTAAATTGGAAAAAATATTGATTTTTTCCCTTAATTATATTTACTTGTTTAATGAATGTCTACATAGATTATGATTAGTCTTTGAATTACTATGGAACTTCAATACTGTTTTGAGACTAAAATAGAATTTAACCTCTTAATTCATTTACATATTTGTGTATTTTAACAGCAAAAAGTATATTCATCTAATCTCATCAGATTTGACAGGTCATTCAACACTCAATCTTGGAGGGGCTGCTACATCCCAGTGATGGGGATGCAAATTATCAAGGGTATGAACATATATCCATTATGTTTATCATATGAATAATCAATCTTCTCATACATATGATATGGTGGCAGCTGCATATATTATTAAGGCCCATCAGCCAATATTGGCACCATCACTCAGTTTGGTTTATGAAACAAAAGGAGGAGAAATCTTTGACTTTTCCTTCTATCCACATTCTCCTGTGGATAGCTCATGAGTTTGAAATCACCACCAATTGAAATGGGGAGAAGGGAGTTCCATTTCATCTCAACCATTTGAAGTTCTTTCGGTTTTAGTTCAATAATTGCGGGTGAAAAATTGAACCATTAATTTTTAGAATGATAATTGGTGTCTTATCCACAAAGTTGTTCAGATTGACCTTTAATTTAGATAATTAATGGAGTGAATATTATATAGCTGAATCACTCAAAATTAATTGAAACGTTCCTATTAAATCTTGATGATTTATACGTGTTTTAGTGACATGGTTTGAATTAGGGATGATTTATTATTTAAAATTCCATGGTACGAGGGTTGGTATGTCTAAAGTCGAGCATCTGCCAAATTTTATACTACGTAAATATTTGTTCTAAAAAGAAGTAAATAATTAAAACTGTGATCAAAGG

mRNA sequence

ATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATGATGATGTGGAGTGCCCTCTCCCTTTGGATAAGCAGATTGCTGATGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCAATTGCTCTCGCGGCGACTAGAGGTTAGCAGAGTGGAATTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGAATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGTTGGCGCTGTCGTGGCATTCTTTCTCATGTATTCATATCTCAGAGCTAGGAGAATCCTATAGCTAAATACTTGTTCAGGTCATTCAACACTCAATCTTGGAGGGGCTGCTACATCCCAGTGATGGGGATGCAAATTATCAAGGCTGCATATATTATTAAGGCCCATCAGCCAATATTGGCACCATCACTCAGTTTGGTTTATGAAACAAAAGGAGGAGAAATCTTTGACTTTTCCTTCTATCCACATTCTCCTGTGGATAGCTCATGAGTTTGAAATCACCACCAATTGAAATGGGGAGAAGGGAGTTCCATTTCATCTCAACCATTTGAAGTTCTTTCGGTTTTAGTTCAATAATTGCGGGTGAAAAATTGAACCATTAATTTTTAGAATGATAATTGGTGTCTTATCCACAAAGTTGTTCAGATTGACCTTTAATTTAGATAATTAATGGAGTGAATATTATATAGCTGAATCACTCAAAATTAATTGAAACGTTCCTATTAAATCTTGATGATTTATACGTGTTTTAGTGACATGGTTTGAATTAGGGATGATTTATTATTTAAAATTCCATGGTACGAGGGTTGGTATGTCTAAAGTCGAGCATCTGCCAAATTTTATACTACGTAAATATTTGTTCTAAAAAGAAGTAAATAATTAAAACTGTGATCAAAGG

Coding sequence (CDS)

ATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATGATGATGTGGAGTGCCCTCTCCCTTTGGATAAGCAGATTGCTGATGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCAATTGCTCTCGCGGCGACTAGAGGTTAGCAGAGTGGAATTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGAATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGTTGGCGCTGTCGTGGCATTCTTTCTCATGTATTCATATCTCAGAGCTAGGAGAATCCTATAG

Protein sequence

MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQQKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL

Homology

[Close]

BLAST of Lsi03G000680 vs. ExPASy Swiss-Prot
Match: Q058N4 (Magnesium transporter MRS2-11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRS2-11 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.0e-43
Identity = 97/158 (61.39%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDP EIRRICIMGRNCTL + +DD+EC LP DK IA++    +  L   ++Q  
Sbjct: 301 MLLDLLEDPHEIRRICIMGRNCTLRRGDDDLECTLPSDKLIAEEEEEEIEMLLENYLQRC 360

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSR ELLLQVGTFCVAVGAL+AGIFGMNL
Sbjct: 361 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRFELLLQVGTFCVAVGALIAGIFGMNL 420

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRI 140
           RSYLEE   AFWLTT GII+GA VAFFLMYSYL  R+I
Sbjct: 421 RSYLEEQASAFWLTTGGIIIGAAVAFFLMYSYLSRRKI 458

[Close]

BLAST of Lsi03G000680 vs. ExPASy Swiss-Prot
Match: B8APK3 (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-A PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-42
Identity = 91/159 (57.23%), Postives = 115/159 (72.33%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           ML+DLL+DP EIRRICIMGRNCTL+K +D++EC +PL+KQIA++    +  L   ++Q  
Sbjct: 316 MLIDLLDDPHEIRRICIMGRNCTLDKLSDNMECSVPLEKQIAEEEEEEIEMLLENYLQRC 375

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVA+GAL+AGIFGMNL
Sbjct: 376 ESIHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAIGALIAGIFGMNL 435

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           +SYLE + +AFW TT GI+VGAV  FF+MYSYL+ R+IL
Sbjct: 436 KSYLETNAWAFWATTGGIVVGAVAGFFIMYSYLKTRKIL 474

[Close]

BLAST of Lsi03G000680 vs. ExPASy Swiss-Prot
Match: Q9AUK4 (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-A PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-42
Identity = 91/159 (57.23%), Postives = 115/159 (72.33%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           ML+DLL+DP EIRRICIMGRNCTL+K +D++EC +PL+KQIA++    +  L   ++Q  
Sbjct: 316 MLIDLLDDPHEIRRICIMGRNCTLDKLSDNMECSVPLEKQIAEEEEEEIEMLLENYLQRC 375

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVA+GAL+AGIFGMNL
Sbjct: 376 ESIHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAIGALIAGIFGMNL 435

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           +SYLE + +AFW TT GI+VGAV  FF+MYSYL+ R+IL
Sbjct: 436 KSYLETNAWAFWATTGGIVVGAVAGFFIMYSYLKTRKIL 474

[Close]

BLAST of Lsi03G000680 vs. ExPASy Swiss-Prot
Match: Q304A0 (Magnesium transporter MRS2-7 OS=Arabidopsis thaliana OX=3702 GN=MRS2-7 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.0e-04
Identity = 27/78 (34.62%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 64  IQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL-RSYLEEHVFAFWLTTAGIIVG 123
           IQL + R ++ ++EL+L  GT CV+V +++AGIFGMN+  ++  +H + F    +     
Sbjct: 307 IQLDNHRNQLIQLELMLSAGTVCVSVYSMIAGIFGMNIPNTWNHDHGYIFKWVVSLTGTF 366

Query: 124 AVVAFFLMYSYLRARRIL 141
            +V F ++ SY R R ++
Sbjct: 367 CIVLFVIILSYARFRGLI 384

[Close]

BLAST of Lsi03G000680 vs. ExPASy TrEMBL
Match: A0A5A7U838 (Magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00610 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51
Identity = 118/159 (74.21%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVEC LPLDKQIADD    +  L   ++Q  
Sbjct: 301 MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECTLPLDKQIADDEEEEIEMLLENYLQRC 360

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL
Sbjct: 361 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 420

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 421 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 459

[Close]

BLAST of Lsi03G000680 vs. ExPASy TrEMBL
Match: A0A1S3CI47 (Magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103500679 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51
Identity = 118/159 (74.21%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVEC LPLDKQIADD    +  L   ++Q  
Sbjct: 301 MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECTLPLDKQIADDEEEEIEMLLENYLQRC 360

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL
Sbjct: 361 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 420

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 421 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 459

[Close]

BLAST of Lsi03G000680 vs. ExPASy TrEMBL
Match: A0A0A0LSV5 (Magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_1G138280 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.8e-51
Identity = 117/159 (73.58%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDP EIRRICIMGRNCTLNKRNDDVEC LPLDKQIADD    +  L   ++Q  
Sbjct: 152 MLLDLLEDPLEIRRICIMGRNCTLNKRNDDVECTLPLDKQIADDEEEEIEMLLENYLQRC 211

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL
Sbjct: 212 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 271

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 272 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 310

[Close]

BLAST of Lsi03G000680 vs. ExPASy TrEMBL
Match: A0A6J1I090 (Magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111469313 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.4e-50
Identity = 115/159 (72.33%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDPQEIRRICIMGRNCT+NK NDDVEC LPLDK+IADD    +  L   ++Q  
Sbjct: 296 MLLDLLEDPQEIRRICIMGRNCTINKGNDDVECSLPLDKEIADDEEEEIEMLLENYLQRC 355

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL
Sbjct: 356 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 415

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 416 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 454

[Close]

BLAST of Lsi03G000680 vs. ExPASy TrEMBL
Match: A0A6J1HK11 (Magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111464814 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.3e-49
Identity = 114/159 (71.70%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDPQEIRRICIMGRNCT+NK NDDVEC LPLDK+IADD    +  L   ++Q  
Sbjct: 296 MLLDLLEDPQEIRRICIMGRNCTINKGNDDVECSLPLDKEIADDEEEEIEMLLENYLQRC 355

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL
Sbjct: 356 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 415

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGII GAVVAFFLMYSYLR RRIL
Sbjct: 416 RSYLEEHVFAFWLTTAGIIFGAVVAFFLMYSYLRDRRIL 454

[Close]

BLAST of Lsi03G000680 vs. NCBI nr
Match: KAA0052093.1 (magnesium transporter MRS2-11 [Cucumis melo var. makuwa] >TYK00707.1 magnesium transporter MRS2-11 [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 2.8e-51
Identity = 118/159 (74.21%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVEC LPLDKQIADD    +  L   ++Q  
Sbjct: 301 MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECTLPLDKQIADDEEEEIEMLLENYLQRC 360

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL
Sbjct: 361 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 420

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 421 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 459

[Close]

BLAST of Lsi03G000680 vs. NCBI nr
Match: XP_008462287.1 (PREDICTED: LOW QUALITY PROTEIN: magnesium transporter MRS2-11, chloroplastic [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 2.8e-51
Identity = 118/159 (74.21%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVEC LPLDKQIADD    +  L   ++Q  
Sbjct: 301 MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECTLPLDKQIADDEEEEIEMLLENYLQRC 360

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL
Sbjct: 361 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 420

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 421 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 459

[Close]

BLAST of Lsi03G000680 vs. NCBI nr
Match: XP_038894956.1 (magnesium transporter MRS2-11, chloroplastic isoform X1 [Benincasa hispida] >XP_038894958.1 magnesium transporter MRS2-11, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51
Identity = 117/159 (73.58%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVEC LPLDKQIADD    +  L   ++Q  
Sbjct: 305 MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADDEEEEIEMLLENYLQRC 364

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGAL+AGIFGMNL
Sbjct: 365 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALIAGIFGMNL 424

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 425 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 463

[Close]

BLAST of Lsi03G000680 vs. NCBI nr
Match: XP_038894959.1 (magnesium transporter MRS2-11, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51
Identity = 117/159 (73.58%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVEC LPLDKQIADD    +  L   ++Q  
Sbjct: 298 MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADDEEEEIEMLLENYLQRC 357

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGAL+AGIFGMNL
Sbjct: 358 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALIAGIFGMNL 417

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 418 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 456

[Close]

BLAST of Lsi03G000680 vs. NCBI nr
Match: XP_031741504.1 (magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741505.1 magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741515.1 magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741526.1 magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741533.1 magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741541.1 magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741543.1 magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741545.1 magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741547.1 magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >KAE8652790.1 hypothetical protein Csa_022786 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 117/159 (73.58%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDP EIRRICIMGRNCTLNKRNDDVEC LPLDKQIADD    +  L   ++Q  
Sbjct: 291 MLLDLLEDPLEIRRICIMGRNCTLNKRNDDVECTLPLDKQIADDEEEEIEMLLENYLQRC 350

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL
Sbjct: 351 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 410

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRIL 141
           RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLR RRIL
Sbjct: 411 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL 449

[Close]

BLAST of Lsi03G000680 vs. TAIR 10
Match: AT5G22830.1 (magnesium (Mg) transporter 10 )

HSP 1 Score: 175.3 bits (443), Expect = 3.6e-44
Identity = 97/158 (61.39%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 1   MLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECPLPLDKQIADDANLVMVRLKGFWIQ-- 60
           MLLDLLEDP EIRRICIMGRNCTL + +DD+EC LP DK IA++    +  L   ++Q  
Sbjct: 301 MLLDLLEDPHEIRRICIMGRNCTLRRGDDDLECTLPSDKLIAEEEEEEIEMLLENYLQRC 360

Query: 61  -----------------QKKWKIQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL 120
                            +    + L SRRLEVSR ELLLQVGTFCVAVGAL+AGIFGMNL
Sbjct: 361 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRFELLLQVGTFCVAVGALIAGIFGMNL 420

Query: 121 RSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRARRI 140
           RSYLEE   AFWLTT GII+GA VAFFLMYSYL  R+I
Sbjct: 421 RSYLEEQASAFWLTTGGIIIGAAVAFFLMYSYLSRRKI 458

[Close]

BLAST of Lsi03G000680 vs. TAIR 10
Match: AT5G09690.1 (magnesium transporter 7 )

HSP 1 Score: 45.4 bits (106), Expect = 4.2e-05
Identity = 27/78 (34.62%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 64  IQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL-RSYLEEHVFAFWLTTAGIIVG 123
           IQL + R ++ ++EL+L  GT CV+V +++AGIFGMN+  ++  +H + F    +     
Sbjct: 307 IQLDNHRNQLIQLELMLSAGTVCVSVYSMIAGIFGMNIPNTWNHDHGYIFKWVVSLTGTF 366

Query: 124 AVVAFFLMYSYLRARRIL 141
            +V F ++ SY R R ++
Sbjct: 367 CIVLFVIILSYARFRGLI 384

[Close]

BLAST of Lsi03G000680 vs. TAIR 10
Match: AT5G09690.2 (magnesium transporter 7 )

HSP 1 Score: 45.4 bits (106), Expect = 4.2e-05
Identity = 27/78 (34.62%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 64  IQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL-RSYLEEHVFAFWLTTAGIIVG 123
           IQL + R ++ ++EL+L  GT CV+V +++AGIFGMN+  ++  +H + F    +     
Sbjct: 318 IQLDNHRNQLIQLELMLSAGTVCVSVYSMIAGIFGMNIPNTWNHDHGYIFKWVVSLTGTF 377

Query: 124 AVVAFFLMYSYLRARRIL 141
            +V F ++ SY R R ++
Sbjct: 378 CIVLFVIILSYARFRGLI 395

[Close]

BLAST of Lsi03G000680 vs. TAIR 10
Match: AT5G09690.4 (magnesium transporter 7 )

HSP 1 Score: 45.4 bits (106), Expect = 4.2e-05
Identity = 27/78 (34.62%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 64  IQLLSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNL-RSYLEEHVFAFWLTTAGIIVG 123
           IQL + R ++ ++EL+L  GT CV+V +++AGIFGMN+  ++  +H + F    +     
Sbjct: 292 IQLDNHRNQLIQLELMLSAGTVCVSVYSMIAGIFGMNIPNTWNHDHGYIFKWVVSLTGTF 351

Query: 124 AVVAFFLMYSYLRARRIL 141
            +V F ++ SY R R ++
Sbjct: 352 CIVLFVIILSYARFRGLI 369

The following BLAST results are available for this feature:

BLAST of Lsi03G000680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q058N4	5.0e-43	61.39	Magnesium transporter MRS2-11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
B8APK3	1.9e-42	57.23	Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. indica OX=399...	[more]
Q9AUK4	1.9e-42	57.23	Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica OX=3...	[more]
Q304A0	6.0e-04	34.62	Magnesium transporter MRS2-7 OS=Arabidopsis thaliana OX=3702 GN=MRS2-7 PE=2 SV=1	[more]

BLAST of Lsi03G000680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U838	1.4e-51	74.21	Magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13...	[more]
A0A1S3CI47	1.4e-51	74.21	Magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103500679 PE=3 SV=1	[more]
A0A0A0LSV5	8.8e-51	73.58	Magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_1G138280 PE=3 SV=1	[more]
A0A6J1I090	3.4e-50	72.33	Magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111469313 PE=3 SV=1	[more]
A0A6J1HK11	1.3e-49	71.70	Magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111464814 PE=3 SV=1	[more]

BLAST of Lsi03G000680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052093.1	2.8e-51	74.21	magnesium transporter MRS2-11 [Cucumis melo var. makuwa] >TYK00707.1 magnesium t...	[more]
XP_008462287.1	2.8e-51	74.21	PREDICTED: LOW QUALITY PROTEIN: magnesium transporter MRS2-11, chloroplastic [Cu...	[more]
XP_038894956.1	3.7e-51	73.58	magnesium transporter MRS2-11, chloroplastic isoform X1 [Benincasa hispida] >XP_...	[more]
XP_038894959.1	3.7e-51	73.58	magnesium transporter MRS2-11, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_031741504.1	1.8e-50	73.58	magnesium transporter MRS2-11, chloroplastic [Cucumis sativus] >XP_031741505.1 m...	[more]

BLAST of Lsi03G000680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22830.1	3.6e-44	61.39	magnesium (Mg) transporter 10	[more]
AT5G09690.1	4.2e-05	34.62	magnesium transporter 7	[more]
AT5G09690.2	4.2e-05	34.62	magnesium transporter 7	[more]
AT5G09690.4	4.2e-05	34.62	magnesium transporter 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.58.340	Magnesium transport protein CorA, transmembrane region	coord: 68..139 e-value: 2.1E-5 score: 26.3
None	No IPR available	PANTHER	PTHR13890:SF45	MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED	coord: 1..45
None	No IPR available	PANTHER	PTHR13890:SF45	MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED	coord: 64..140
None	No IPR available	SUPERFAMILY	144083	Magnesium transport protein CorA, transmembrane region	coord: 76..131
IPR039204	Magnesium transporter MRS2-like	PANTHER	PTHR13890	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	coord: 1..45 coord: 64..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G000680.1	Lsi03G000680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0046873	metal ion transmembrane transporter activity