Lsi03G000010 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G000010
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzf-RVT domain-containing protein
Locationchr03: 5743 .. 10579 (-)
RNA-Seq ExpressionLsi03G000010
SyntenyLsi03G000010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAGTGTGTAGAATGCAGTTGATAAACGGTCTCTGCCGCTGCCTTGCAAATATCTCTCTGGAAGATAAGGGACCCAAGAACTTGGGAACGCCAAGCAGGTAGACACTGGAAGTCTGGAAGTTGTTTCCCAATGGAGCTTACTCTGCCTGCCCCCTTGTTTCTCTCCTTCCCTAAGAGTACGCTTCAATTCTTTCTGCTCTCATTTCATTTCCATTTCTCTGTTTCCCATATCAAATCATCACAAACTTATCTAACCCATGTTGCCAATTTGGGTTTTCCCAATGAAATTGATTATGAAGACTCATATAAGTTTAACAGATTGATGTACATGTGGGTTTTTACAGTTCTAACTTTCCACCATTTCTTATCATACGATTATCCGTTCTTTCTCTTTGATCTTTTTGCAAGAGGGTTTTTGTCAGTTTATTCGTCTATATGGGAATTTTCAATGACTATGTGACTGTTGTTTGACTAGAGTTTTTTGGCACAATTTGGTTGTACTGGAAAGCTTTGAGAGACTAGATTTTGTTGGTCTGCTATGATTGATGTGATTGTTTAGTTGCTAACTCATCTATAATGTAGGTTAATTAAGATGAATATTGGTTGGTCGTTGGCTAGCATTATTTAGTTGTTTGAAAGGTTTGGAATAAGACTTTTGAGTGTTATGATGGTTGACAGTAAAGGGGGTTTATCACATTGCTGAAATCAAGGTTCATATAGTACTGTAGTTCATAATTAAGATCTTCTATTTCTAGTAAACTATGGTGAAGGGAATATAACCAAATTTGGGAAATGTAGGTCTAAGTAGTGCAATGTGTCACTATTGTAGACATTGGTTTCATATTGGGGGTGCTTTAAGGGCACTTTGTAGGTGCCCTTTGTCACAAGGAGGAGCCCTTCAATTTCTTGAGGATGAAATTGTGTCAATGATGTTGTGTTTCGAAGCAATGTCTCAAATTCATGTGGAAGACACTGTCTAAAGTTGCCTTTAGGTGGTTGTGGCATGTTATTTAGGACATGCTAGCGAAGCGAGCTATTTGATTGTGGTTGTTTACATAGTTTTCATAGCTGTTAGGTCCTACTTCTTTCCGTATCATTCAATTAGACGGCTACATTTGATGTGCGTGTGCTAGTGTCACAAATTGCCATATATCTATAGAAATTGCTCACTCTCAATATACAGTTTCATCTCATGAGCAGAACATATAGAACTTTCCTTCTCAGCTCTTTCCTCTCATTTTGATTACCAACTAAATTTTACGACCTTACTTGAACATGATCTATTCTACAGGTTGTACAATTGTGTCTTTGAGTTCTAAGATTACTAACTAAATTTTATCCATAAGACAACTTCCTCACCTGAGTGCTGACTGCCTTGGAAAGAAATTTTGTATCTCATTTTGTTTAGCCATATTTTTGGCTCTCCTCTTCCAAAAATCCATCTTTAGTTGGTTTCATCATTGCTCCATTGCTCATGCCATAGAACAACTTTTTTTTGGCCATCCCTTCAGAAGCATCCAATGTTTATTTGGGAATCTTCAGTCATAAGTATTTGTGTGGGTTAAAGTTAGAATTAGAAAGAACCATACAAACTTCAATATCTCAAGTTGAAATTATAGAAAAATTTGGGAGATCAATCATTTTGAAGCTTTTACTTGGTCCACCGCTAGTTAATTATGATGCCTTTTTATGATCAATGCCAATTAGAGGGGCTTTTTTGTTTTTTGTTTTTATTTATTATTTATTTTTTTGTAGTTCCCTTGCTTCTCCAAGTTGATCTCTAATACCCGCTTGTATATTTTCTTCAATAAGTGTCCCATTTGATGATTTACTTCACAATGACCTCACTTTTTTCATTTATTTTATTTTGTCTCCTTCCTTTTTTATTTTTATTTTTTTTATAATATTTTTGTTATTATTTTAACAGGTTATGCTCATAAGACTATCTTCTTTTCCTGTTGCATTTATAATTAAGAATTAGATTTGGCAGATTTTGTTAAAAAGTCAACCTTGGAAACTATATTTTCTAAAATAGGGGACACCAATTTATTGCTAAAGCTCTTAAATCAAGTTTTGTGAGCAAACCATGAGTAAATTTATCATTTCTTTCCTCTATACTAGTAAATCAGACAGTAAAATTTCCATATTAGATTAAGGGATTGGAGGAGTTGTTAAATTTTCCCTTTGCTGTACTGGAATCTACATTATGAACTTATGATATAACATCGAAACTTTCTGCTGATTGGAATGCTTTTCATGTGAAGTCGTTAGGGATTCTAAACCCAACAACCATGGCCTTTGCTTATTGGACTCCAATCCTCTTTCAGCTGAATTGAAACTACAAGGTGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCCGAAACAGCAGCTTCTGTGGCTATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTCCTTTCCAGAAGAAACAAAGATTCTGAGGCAGTGGAGGTGTGGTTTTACATCTGAAACACTGTTTTGTGCCATTAACGTATTGCCAAGTCTCTGAAATCTGCATCTTGTCAGTTACACTGTTTTTGTGTCATTATCTAAGAAGCAAAGACACTGCATTTGGCTTACGTGTCCACGTCTTACACGAGTTTGTTACTTGGACACTCCAACACTTATTCGACACATATCGAATACTTGTCAGCACAATAGACATGTTAGACATGTAGACATTAGTTGTACAAAAGTTAATATGGATCAAACATTTGTTAGCCACGTACCGAACACTTGTTAAGCATACTAAATAGACACATAGTAATATAGGATAAAGATGATAAAATTTGAGAGCTTAATACATCAAACTCATTTTTTAAGCATGTAAATGTGCTTATTGGGTTTGAATTTCTTTCTTATATAAAAATGATATATATTTAAGAAAGTGTATACCTTAATAGGTGTTTTCTTGCCATGTTCATGTCCTATTTTTAAAAGATCACGTCTCATGACTTGTATCCATATTCGTGCTTCTTATCTATATATAATTTGAGTTATTAAACTAACCCTATCCTCGAATGCTTAAATTGATAGGTGTATTTGATCTTTTATTCGTATTCTTAATAGAGTCAGTTACTTGTGGACTTGAAAATTAGCACAATACATGACTATCAATATTTTTTTTAGGAAGAATAGCACTGCAAGAACCTCCAGTTATGATAACATGCTAAATGGCCTTTTTTTTTTTTTTTAAGTATGAAATTTACAAAAGGGAAGAAAGCTGTAGTCCGAATTGCGATGGAGTTACAATAAACATCTCCAATTGGACAAAAGTCAAACGTATTAAATTTAAAAAGAGGTGACAATTTACACCAAGATATAGCTAGGTAAATTACTTTCTCAAAGAACTTATTGTAGTCTAAAGTCCTCTTCTGTTATCAAAATACCTTTGATTTCTTTCCACCCATGTAGGCCATCTAAAAGAGTTTCTTCCTCTTTCTGAAAGGATGACCCAAAGGAGTATTGGACAGGAGAGCTTTCGGATCCTTTGGAGAGCCAGAGACCAATTGAAAAAAAAATCATATCCTTCCAAAAAGCTGATGTAAAAGAACTAGCAGAGAAAATGTGTTATTGTGAATCCTCATCGTTTTTACAAAGAATGCATCATTTGGGGAGATAAGATCATGGAAGGGAGCCTTCTTTGGAGCTCGTCTTGCGTGTTTGTTGCCATATTTATCTTTCCAAATTGCCTGTCTTAATAAAGGTTGCAGAGCATCTCCCATTTGTTTAGAATAACTAAGCAAGGATTTAGTGGAAAATATACCATTTGATTAAGAAATGATTAAGGTGTAAGGCAGACAGAAGTTTTTTTTAAACAACAAATGGGGGTATGGTAATTTAGACCTCCGACCTTAAAGAAAGAAGTACATGCCAATCATCATTGAGTTAAGCTCATATGCTCATGTTGGCGATAGAAAGTGGTTTAACTGCCTATGAATTTCCTCACCCTTAGGATTTCTCAGATTTATGTTCCAAATGTCAAGGTCTAGTGGCCACAAATCCTTTACAGCAGCATTTTTCTGGTGTCACCTTACACTACCACTAAACTCAAATATCCTTAACTGGCTTGGTTGTGATACATTTGATCTTTTCTTTTCTACTGACTTCTTTTGTGGATTGTTTATAATTCAATGGTTACCCTTTAAATTTCAGGTTCCTTTGATAACATGTGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGAGGGCGAGGCTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGTATGATTTTCTTGGCACACTCTCCTCTTTTTAGAAAGATTCTACTTTCAACTAATAATCTGACTTTAATCTTTCTTAGGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAGTCAGAAATTCTAATAAAGAGATGAAATCTTTACAGACGTACATGAGAGTTAAGACCACAAACTGCTGGTTTTATTGTTTAGAGGAAATTTGACTTTATCCTTTTATGAGCTTGCTGGATCAGTTTCTAGTCAAAAGTATTGTAAATATTAGCATGATAATGTATTTTAAATTTTACATGTATTGAGCTCTCGAGAAAGTATCAAAACTCTTTCATCTTTTCTTTTCTTTTTTCTCTGGAGTGAAAACTAGGTCATGTTTTATTCTTTCCTAGTACAACAATATCCAGAGATGGAAGCTTTAACCTCTAGAGAAGAAAATCATACCAATTACCGTTG

mRNA sequence

AAAAAAAAGTGTGTAGAATGCAGTTGATAAACGGTCTCTGCCGCTGCCTTGCAAATATCTCTCTGGAAGATAAGGGACCCAAGAACTTGGGAACGCCAAGCAGGTAGACACTGGAAGTCTGGAAGTTGTTTCCCAATGGAGCTTACTCTGCCTGCCCCCTTGTTTCTCTCCTTCCCTAAGATCGTTAGGGATTCTAAACCCAACAACCATGGCCTTTGCTTATTGGACTCCAATCCTCTTTCAGCTGAATTGAAACTACAAGGTGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCCGAAACAGCAGCTTCTGTGGCTATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTCCTTTCCAGAAGAAACAAAGATTCTGAGGCAGTGGAGGTTCCTTTGATAACATGTGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGAGGGCGAGGCTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAGTCAGAAATTCTAATAAAGAGATGAAATCTTTACAGACGTACATGAGAGTTAAGACCACAAACTGCTGGTTTTATTGTTTAGAGGAAATTTGACTTTATCCTTTTATGAGCTTGCTGGATCAGTTTCTAGTCAAAAGTATTGTAAATATTAGCATGATAATGTATTTTAAATTTTACATGTATTGAGCTCTCGAGAAAGTATCAAAACTCTTTCATCTTTTCTTTTCTTTTTTCTCTGGAGTGAAAACTAGGTCATGTTTTATTCTTTCCTAGTACAACAATATCCAGAGATGGAAGCTTTAACCTCTAGAGAAGAAAATCATACCAATTACCGTTG

Coding sequence (CDS)

ATGGAGCTTACTCTGCCTGCCCCCTTGTTTCTCTCCTTCCCTAAGATCGTTAGGGATTCTAAACCCAACAACCATGGCCTTTGCTTATTGGACTCCAATCCTCTTTCAGCTGAATTGAAACTACAAGGTGGAAGAAGAACATTGACTATAGCTTCTTCTCTACCCGAAACAGCAGCTTCTGTGGCTATTGCTGCTACAGTTGTAGGTGCAGCAGCCACCTTCCTTTCCAGAAGAAACAAAGATTCTGAGGCAGTGGAGGTTCCTTTGATAACATGTGAAGATTGTGGTGGTTCAGGCTTATGTTCTGAATGCAAAGGTGAAGGATTTGTGCTTAAGAAACTGTCAGATGAAAATGCAGAGAGGGCGAGGCTGGCTGCGAAGAATATGGCCACTCGATTCACCGCAGCGCTTCCTAAAAAATGGAGTTACTGTTCCAAGTGCTCTTCTGCTCGTTCTTGTAGTACTTGTGGTGGCAGTGGGACGTTGAACTCTTAG

Protein sequence

MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Homology
[Close]
BLAST of Lsi03G000010 vs. ExPASy TrEMBL
Match: A0A0A0LVE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097700 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 156/164 (95.12%), Postives = 162/164 (98.78%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAAS 60
           MELTLP PLF+S PKIVR+SKPNN+GLCLLDSNPLSA++KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 164

[Close]
BLAST of Lsi03G000010 vs. ExPASy TrEMBL
Match: A0A1S3CIP4 (uncharacterized protein LOC103501412 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501412 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 155/164 (94.51%), Postives = 160/164 (97.56%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAAS 60
           MELTLP PLF+S PKIVR SKPNNHGLCLL+S PLSA++KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 164

[Close]
BLAST of Lsi03G000010 vs. ExPASy TrEMBL
Match: A0A1S3CJ25 (uncharacterized protein LOC103501412 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501412 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPK------IVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSL 60
           MELTLP PLF+S PK      +VR SKPNNHGLCLL+S PLSA++KLQGGRRTLTIASSL
Sbjct: 1   MELTLPTPLFVSIPKKCSSCEVVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSL 60

Query: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120
           PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL
Sbjct: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120

Query: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 170

[Close]
BLAST of Lsi03G000010 vs. ExPASy TrEMBL
Match: A0A6J1KI37 (uncharacterized protein LOC111493423 OS=Cucurbita maxima OX=3661 GN=LOC111493423 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.9e-73
Identity = 147/164 (89.63%), Postives = 152/164 (92.68%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAAS 60
           MELTLP PLF S  KI+RD KP NHGL L DSNP+SA+LKLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFASSSKIIRDPKPINHGLRLFDSNPISADLKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAEEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT NS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 164

[Close]
BLAST of Lsi03G000010 vs. ExPASy TrEMBL
Match: A0A6J1G9T1 (uncharacterized protein LOC111452109 OS=Cucurbita moschata OX=3662 GN=LOC111452109 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 145/164 (88.41%), Postives = 151/164 (92.07%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAAS 60
           MELTLP PLF S  KI+RD K  NHGL LLD+NP+SA+LKLQGGRRTL IASSLPETAAS
Sbjct: 1   MELTLPTPLFASSSKIIRDPKLINHGLRLLDTNPISADLKLQGGRRTLPIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAKEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT NS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 164

[Close]
BLAST of Lsi03G000010 vs. NCBI nr
Match: XP_004147283.1 (uncharacterized protein LOC101218484 [Cucumis sativus] >KGN64792.1 hypothetical protein Csa_014200 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 156/164 (95.12%), Postives = 162/164 (98.78%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAAS 60
           MELTLP PLF+S PKIVR+SKPNN+GLCLLDSNPLSA++KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRNSKPNNNGLCLLDSNPLSADVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNK+SEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKNSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 164

[Close]
BLAST of Lsi03G000010 vs. NCBI nr
Match: XP_008463215.1 (PREDICTED: uncharacterized protein LOC103501412 isoform X2 [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 155/164 (94.51%), Postives = 160/164 (97.56%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAAS 60
           MELTLP PLF+S PKIVR SKPNNHGLCLL+S PLSA++KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFVSIPKIVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 164

[Close]
BLAST of Lsi03G000010 vs. NCBI nr
Match: XP_038893788.1 (uncharacterized protein LOC120082609 [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 9.2e-78
Identity = 153/164 (93.29%), Postives = 159/164 (96.95%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAAS 60
           MEL LP PLF +FPKI+RD KPNNHGLCLLDSN LSA++KLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELILPTPLFATFPKIIRDPKPNNHGLCLLDSNCLSADVKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDS+AVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDE+AE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSQAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDESAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 164

[Close]
BLAST of Lsi03G000010 vs. NCBI nr
Match: XP_008463206.1 (PREDICTED: uncharacterized protein LOC103501412 isoform X1 [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 3.0e-76
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPK------IVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSL 60
           MELTLP PLF+S PK      +VR SKPNNHGLCLL+S PLSA++KLQGGRRTLTIASSL
Sbjct: 1   MELTLPTPLFVSIPKKCSSCEVVRSSKPNNHGLCLLNSIPLSADMKLQGGRRTLTIASSL 60

Query: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120
           PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL
Sbjct: 61  PETAASVAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKL 120

Query: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTL+S
Sbjct: 121 SDENAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLSS 170

[Close]
BLAST of Lsi03G000010 vs. NCBI nr
Match: XP_022998903.1 (uncharacterized protein LOC111493423 [Cucurbita maxima])

HSP 1 Score: 285.0 bits (728), Expect = 4.0e-73
Identity = 147/164 (89.63%), Postives = 152/164 (92.68%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKLQGGRRTLTIASSLPETAAS 60
           MELTLP PLF S  KI+RD KP NHGL L DSNP+SA+LKLQGGRRTLTIASSLPETAAS
Sbjct: 1   MELTLPTPLFASSSKIIRDPKPINHGLRLFDSNPISADLKLQGGRRTLTIASSLPETAAS 60

Query: 61  VAIAATVVGAAATFLSRRNKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDENAE 120
           VAIAATVVGAAATFLSRRNKDSEA E+PL  CEDCGGSGLCSECKGEGFVLKKLSDENAE
Sbjct: 61  VAIAATVVGAAATFLSRRNKDSEAEEIPLRPCEDCGGSGLCSECKGEGFVLKKLSDENAE 120

Query: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSGTLNS 165
           RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGG+GT NS
Sbjct: 121 RARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGTGTFNS 164

[Close]
BLAST of Lsi03G000010 vs. TAIR 10
Match: AT3G45050.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 97/163 (59.51%), Postives = 110/163 (67.48%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETA 60
           MEL+L      SFP  V   K         D   L+ +LK   Q  +R+ T+  +L ETA
Sbjct: 1   MELSLIKLQSFSFPSSVSSVK---------DVRFLNLDLKSSHQRAKRSSTVVPALAETA 60

Query: 61  ASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDE 120
            S+AIAATVVG AAT L RR NK SE  E  +  CE C GSG+C ECKGEGFVLKKLSD 
Sbjct: 61  VSIAIAATVVGTAATILVRRNNKASEEAEASMKECEACLGSGICPECKGEGFVLKKLSDA 120

Query: 121 NAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG 161
           NAE+ARLAAKNMATR+TA LPKKWSYC+KCSS RSC  CGGSG
Sbjct: 121 NAEKARLAAKNMATRYTAGLPKKWSYCTKCSSTRSCMICGGSG 154

[Close]
BLAST of Lsi03G000010 vs. TAIR 10
Match: AT3G45050.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 97/163 (59.51%), Postives = 110/163 (67.48%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETA 60
           MEL+L      SFP  V   K         D   L+ +LK   Q  +R+ T+  +L ETA
Sbjct: 1   MELSLIKLQSFSFPSSVSSVK---------DVRFLNLDLKSSHQRAKRSSTVVPALAETA 60

Query: 61  ASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDE 120
            S+AIAATVVG AAT L RR NK SE  E  +  CE C GSG+C ECKGEGFVLKKLSD 
Sbjct: 61  VSIAIAATVVGTAATILVRRNNKASEEAEASMKECEACLGSGICPECKGEGFVLKKLSDA 120

Query: 121 NAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG 161
           NAE+ARLAAKNMATR+TA LPKKWSYC+KCSS RSC  CGGSG
Sbjct: 121 NAEKARLAAKNMATRYTAGLPKKWSYCTKCSSTRSCMICGGSG 154

[Close]
BLAST of Lsi03G000010 vs. TAIR 10
Match: AT3G45050.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 97/163 (59.51%), Postives = 110/163 (67.48%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETA 60
           MEL+L      SFP  V   K         D   L+ +LK   Q  +R+ T+  +L ETA
Sbjct: 1   MELSLIKLQSFSFPSSVSSVK---------DVRFLNLDLKSSHQRAKRSSTVVPALAETA 60

Query: 61  ASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDE 120
            S+AIAATVVG AAT L RR NK SE  E  +  CE C GSG+C ECKGEGFVLKKLSD 
Sbjct: 61  VSIAIAATVVGTAATILVRRNNKASEEAEASMKECEACLGSGICPECKGEGFVLKKLSDA 120

Query: 121 NAERARLAAKNMATRFTAALPKKWSYCSKCSSARSCSTCGGSG 161
           NAE+ARLAAKNMATR+TA LPKKWSYC+KCSS RSC  CGGSG
Sbjct: 121 NAEKARLAAKNMATRYTAGLPKKWSYCTKCSSTRSCMICGGSG 154

[Close]
BLAST of Lsi03G000010 vs. TAIR 10
Match: AT3G45050.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 77/138 (55.80%), Postives = 89/138 (64.49%), Query Frame = 0 

Query: 1   MELTLPAPLFLSFPKIVRDSKPNNHGLCLLDSNPLSAELKL--QGGRRTLTIASSLPETA 60
           MEL+L      SFP  V   K         D   L+ +LK   Q  +R+ T+  +L ETA
Sbjct: 1   MELSLIKLQSFSFPSSVSSVK---------DVRFLNLDLKSSHQRAKRSSTVVPALAETA 60

Query: 61  ASVAIAATVVGAAATFLSRR-NKDSEAVEVPLITCEDCGGSGLCSECKGEGFVLKKLSDE 120
            S+AIAATVVG AAT L RR NK SE  E  +  CE C GSG+C ECKGEGFVLKKLSD 
Sbjct: 61  VSIAIAATVVGTAATILVRRNNKASEEAEASMKECEACLGSGICPECKGEGFVLKKLSDA 120

Query: 121 NAERARLAAKNMATRFTA 136
           NAE+ARLAAKNMATR+TA
Sbjct: 121 NAEKARLAAKNMATRYTA 129

The following BLAST results are available for this feature:
BLAST of Lsi03G000010 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi03G000010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVE31.8e-7995.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097700 PE=4 SV=1[more]
A0A1S3CIP41.2e-7894.51uncharacterized protein LOC103501412 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CJ251.4e-7690.59uncharacterized protein LOC103501412 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1KI371.9e-7389.63uncharacterized protein LOC111493423 OS=Cucurbita maxima OX=3661 GN=LOC111493423... [more]
A0A6J1G9T11.1e-7188.41uncharacterized protein LOC111452109 OS=Cucurbita moschata OX=3662 GN=LOC1114521... [more]
BLAST of Lsi03G000010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147283.13.7e-7995.12uncharacterized protein LOC101218484 [Cucumis sativus] >KGN64792.1 hypothetical ... [more]
XP_008463215.12.4e-7894.51PREDICTED: uncharacterized protein LOC103501412 isoform X2 [Cucumis melo][more]
XP_038893788.19.2e-7893.29uncharacterized protein LOC120082609 [Benincasa hispida][more]
XP_008463206.13.0e-7690.59PREDICTED: uncharacterized protein LOC103501412 isoform X1 [Cucumis melo][more]
XP_022998903.14.0e-7389.63uncharacterized protein LOC111493423 [Cucurbita maxima][more]
BLAST of Lsi03G000010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G45050.22.8e-4059.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G45050.42.8e-4059.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G45050.32.8e-4059.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G45050.11.2e-2755.80unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37230OS06G0731300 PROTEINcoord: 1..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G000010.1Lsi03G000010.1mRNA