Lsi02G030030 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G030030
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCASP-like protein
Locationchr02: 36112100 .. 36119835 (+)
RNA-Seq ExpressionLsi02G030030
SyntenyLsi02G030030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGAACACAGAATCCTCTCTCACGCACTCAGAGAGAATCTCAACGGAAAGATACGCCTGAAATTTTTCGAAAGACTGGTGAACGAAAAATGTCGTCGGTGCCGGAGGTGGCGGTGCAGCTACCGGAGACGACTAAGGTGGCGGCTATGGCGTCCGAGAGCAGCACAATCAACGAACTGATGGAACCGCCGGAGCGAAGCTTCGACCGTCTGAGAGCCGATTTGTATCAGTTAGCGCTGAGGCTGATTTGTATTGCTACGTCCACGACGGCAATGACGTTGATGGTTACCGCCAAGGAGTCTAGCACTGTTTCCATCTACGGATTTGAACTTCCCGTTCACTCCAAGTGGTCGTTCTCAGATGCATTCGAGTAAGTTTGCCGTTTTTAGTGTTACTAGTTTTATGCCCTAGAGGTTTTGGTGATTTGAGTCTGTAATTGGCTTGTGAGAAAGGAAATAGTAGAGGGGAGGAACTGTGAGATCCATTAGTTGAAAACATGTTTGCTCTGTGGAGGAATAGTGCTCCCCTGTAATCACTGCTGAACTTTCAATTTCTTGTTTGTCTTTTATTCTCTTCATTGTCTGTTCTCCTTCAATCTTGAAATGCCTTTAGGAAATCTCACCGGAGCCTAATAGGCAGGACTGGAAGACAAAGTGACGAGACGTGTATTTTCTGTCTGCTTTTGGGGGAAACATTTTACTGCTATTTCTTTTCATTTATTACCTTGTTTTCTTGGCACCCAAACAGAGTATTATCTAGTTCTTATTGTTTCTGATCTTTCACCATTACTGGCCTGCCTACTTTGGGAAAAGCCACTTTCTATCTTAACGTTGATTCAGTCGCATTTCTTCTGTTGGAATGCTGGCAAATCTAGTTCCTTCGAACATGAACAATGGATTCTGGAAAACCCTCTTCATCCAAGTTTCATGGCTTCGTCCAAAATGAACCCGTGAACTCGATTCCTTCTTTCATCAAAATATTCCCCATGTCATGTTTGTCTTCTTCTGGACCTGTTGTGACCCTTCATACAAAATTTTGACCAACTGCCTTCTGCTTAATTGCTCTGTCTTTCTTTATTATTCTCAATGCATCCAATGGTGCCACAGGTCACCGTTATGGTTTATTTTTTAAAAGGGTAATAAAACAAAGAGTTTGGTGCATTTGTTTGTACTTCGTTATTATTAAAATGAATTGCGTTTTAAAACAGAGTTGAGATTGTGGGGTGTTTTGAATGAGTTGAAAGTAGTTGAACCCTGTAAGTTTATGGTGAGTGCAGGTACCTTGTTGGAGTTTTAGCGGCTGTCGCTGCCTACTCTTTGTTGCAGTTGCTCGTTACTGCTTCCAAGCTTGCCAGGAAGTCCCCAGTTCTTAGCTCCAGAAGCTAAGCCTTGCTCATTTTCGCTATTGATCTGGTAATTATTTTGTGTTGTAGCTCAGGGAAAGAGTCGCATGTTGCCTATAATTTATTGGAGAAATATTTTTGTGGCCCCTCGTTATATGTTAGGAACAATGGTGATGTTTGTTTAAGTATAGATATAATTAAATTTATCCTAACTTATATGTCTAGGCTTTTAAATTTGGTGGTGATTTAACATTGTATTGGACCAATATAGGTAATGTGTTCTAATTTCTAGTAATAACGTCATTTTCTTCTTAATTTATACTGTGACTCATAAGCTTAATAAAAGAATTTTGATGGAATGAGATCAAGTTCTATAGTTCCCGTAAATTTTAAGTATTGACAATCTTTCAAGTTAATTAATGATGAGGAGAATTGTTATATAATTAGTACATTTAAGTTAATATTTATTTAGTTGTTAATTTAGATTAATTAATTATTTGTTATATTTCTTTGTAAGACTGTAAATAACTACTTTGAAAGTGTTTGGCTCAAGGAGTTTGACTAAAGAACATAGTTTTTTGTCTGATTGACTCCCTTACATTGTGGGCCAACAACTTCCTAAATTTTATAACTCTCTAGATTTCACTGCTCCACTCTTGCTCAAACGCTTTTAAGAGCTCTTGATGAACAAATATATATATATATATATATATATATTGATGAAGAGCTCTCTTAACTTAGATATGGACTTCTCTTGTTGAGTTAGGAATTTAGTATAATATCTTCTATCTTTCATTGCATCAATTAATATTTAAATATCTTAAGATTAGGCGGTTGTTGTTGTGACATCCTCTACAGTTGGTAATACTGTTGGAAGTACAGTTCCCATTAATAGTCTGATAGCTTCTTAAGTTGACTTAAGTCCATTTATTGGATAACCATAAGTGTAATCTTCAGCCTACCTAATTCGCTGGTTAACTGGGATTTTTATTTTCTTAGTTGTGTATTTAAGAAGAGCTCCTCGGTGTATGTAAAAACATTCATTCCAGCACTTGAAGTAAACAAGAAACAGAGAGCATTTACTTCTAACTTCTTCTTCCTCTTTAAATTTAAACTTGGTATCAGAGCAACAAATATGGTTGACATCCAAACCGATCCTGATCCAAACAAAAAATCCTCAGACGCTGAAGATTCTGAAATGGCGAATCCCTCCTCTGCACAGAAAAATGCAGCAAGCAGCAGCAGCTCCCTTCCTGCCATCGAACGTTATCAAGTAAAGTCAGGTACCTATCCCTTCTTTCACAAATCTGCTAAATCAAGTAACTTCTATCAAGTTAGATAGAGGAAACTTTCTTCTCTGGCAAAATATCGTTCTTCCTATTCTGAGAAGCTACAAATTGGAAGGCCACCTTACTGGAAAAACACCAGCTCCTGAGCATTCAATCATTATCCCACCTTGCGAAGATGAACCCAAAGGGTTACTACTGCCAAATCCAGAATATGATATTTGGCTAGTTGCTGATCAACTTCTGCTCGGGTGGTTGTATAACTCAATGACGCTTGAAGTAGCAGCTCAAGTTATGGGATTTGATGAAGCAAGACTACTATAGGATGCCATTCAAGAATATTTTGGTATTCAATCAAGATCTCAAGAAGACTATTATCGACAGATGATGCAACAAACAAGGAAAGGGAGTATGAAGATGGAAGAATACTTAGCCATCATGAAAAAATACTTCGACAATCTTTTGCTGGCAGGATCTCCTATGGATTTTAGGAGTTTCATCTCTCATGTCTTTGCTGGACTTGACGAAGAATATAACCCAATAGTTTGGTTATTCGAAGTCAAGATCTCACTTGGAATAAAATTCAATATGAACTTCTTGCTTATGAACAAAGACATGAAAAACTCCAAGAATTTAAGGGAAACTTATCTATAAATCAGCCTAGTGCTAACTATGTTACTGCTGACAAGAAAAGGAACTCTAATCCACCTCAGTCCAGTCGTGGGAGCTACACCAACACTTCCAACAGAGGAAACAACAACAATAACAGAAGCAGAGGATGAGGACGAGGTCGTTACTCTCCATATCCTCAACCCAATAGACCTACATGTCAAATTTGCAGTAAATATGGGCATGCTGCTGACGTCTGCTACTCAAGATATCATAAAGAGGAAGAACGCAGTGTGGATACTACTCCAAATAGTAAAAAACCCACTGCTCTTATGGCTTACCCAGAAACTCTTGAAGATTCAGCTTGGTACCTTGATAGTGGGGCCACCAACCACGTAACTGCTGACCTTCAAAAGCTCTCCCTCAAGGGTAAGTACCTAAACTCAAATGCTCTTTTAGTTGGTGATGGTTCTAAAGTACCGATTGTTGCCTATGGAAGTCTAACCTTACCAAGTAATGCTGGTGCTATTTTCCTCAAAGAAGTCCTTTATGTTCCTCTCATGAAAAAGAATCTGATCAGTATATCTAAGCTAACTCAAGATAACGATGTGGTTGCTGAATTTCATGGCAATGTCTGTTTTGTCAAGGCAAGGAAATCCAAGCAAATATGCCTAACAGGGAGACTTGAGCATGGACTCTATTGTTTGGAAGCAGCTACACCCAAAGCCTCAACCATCTTACTAGAAAATAAGGAAGTTGCTCGTATGGTTTATCTGGGAGAAGCCACTAGGACACACTCATCTCAGTCTTTTGAAGATTTGACCACGACTCCTACATATATTTTGTTATCTTGTACAAAAGATGTGTGGCACCAAAGATTGGGCCATCCGTCCCCTAGGATTCTTAGTCAAATCTTGCAAAAATGTAAACTATCTGTTCCAAGTAATGAAAAAGGTGATTTTTGTGAGGCATGTAAATATGGCAAGGCACATAGACTACCTCTTGCTACTTCTCAATCTCGCGCAACTAAACCACTTGAACTGATCATATGGATCTTTGGGGACCAGCACCTATCATTTCTACTAATGGTTACAAATATTACGTAGCTTTTTTGGATGACTTTAGTATGTTCACTTGGATCTATCCTCTCAAAACTAAAGGAGAAACTGCGGTTGTTTTTAGTCAACATAAAAGACTTGTTGAAAATCTTTATGATACCACAATCAAAATAATTCGTTGTGATGGAGGTGGAGAGTTTAAACCAATTATAGAAACTGCTCAAAAACAAGGAATTGTGATTCAAGTCTCATGCCCTCATACTTCTTCTCAAAATGGAAGGGTAGAGTGGAAGCATCGTCATATTGTAGAGACTGGTCTTGCCTTGCTTGCTCAAGCACATATGCCCCTTCGGTTCTGGTGGGAAGCTTTTCATACAGTTGTTTATCTTATCAACCGTATGCCTTCACCTGTCATCAACCATAAAAGTCCCTTTCATTTACTAAAAGGATCTCCTCCTGACTATACTTGGCTTCGTACCTTCGGGACTGCTTGCTACCCTTGTCTAAGACCATACCAACATCACAAATTTGATTACCACATTGAAAAATGTCTATTTGTTGGGTACAGTAATCACCATAAAGGCTATAGATGTTTAGCCTCCTCAGGCAAGATTTTTGTCTCACGACATGTATGCTTCAATGAGAAAGATTTTCCTTACTCTACCTTGTTTCCCGACAATGCCAATGACAATGCCTCTACCACCACTTTAACCATGTCATGGCTTCCTATTCAACCCTCAGTCAGATTCCACCAACAGTTTCTCCTCTGAATCACCCTCCTCTCCTGCTTCGGTTAGCACCTCCCTACCCTTTCAACCCTCTCCTCTTTCCCAGTCCCCTGACTCACAAGCCTTGTCTCCTCAGCTCTCCCTATCATCCTCTACCAACCCTCCCAATGCTCATCCTATGACAACTCGAGCTAAAGCAGGTATCTCCAAGCCTAAGCAATTTTATGGTTGTCTTGCTCAACTTGATTCTTCCAAGGATTGGTCTCAATTCGAGCCCACTCACTATAAAGATGTTGTCTCTTCTCCAGAATGGCGACTAGCCATGGACCGTGAATTTCAAGCTCTTCAACTCAATCACACTTGGGATCTTGTTTCCCTCACTACATCTCATAATATTGTTGACACCAAGTGGGTCTACAAGATCAAGCGCGATGCTGATGGCACCATACAACGGTATAAGGCACGGCTGGTTGTCAAAGGCTATCTTCAAGCTCCAGGAGTTGATTTTACTGAGACATACAGTCCTGTTATCAAACCAACTACAATTCGTCTGGTACTTAGCCTGACTCTATCTCGAAATTGGTCCATTCGCCAACTTGATGTTAGTAATACCTTTCTCCATGGTACGTTAAAAGAAGAAGACTATGTCTCTCAACCGCAAGGGTATGTTGACCCTCAACATCCTACTCATGTCTGTCGCCTTTGCAAAGCTCTATATGGGCTTAAACAAGCTCCTCAAGCTTGGTATGAGGAGTTGCAAGATTTTCTACTACAGGGACATTTTACTCAGTCCAAGGCTGGTCTATCCTTATTTATCTACAACTCTTTACAAGGCACCATTCTTCTTCTGGTCTATGTTGACGACATCATCCTACTGGATCATCCCAATCTCTTCTTACTTCATTTATCTTCAAATTACAACGCACCTTCGCAATTAAAGACCTTGGCTCTCTTCATTACTTCCTTGGCATTCAAGCCCATTCTACTTCAAATGGGTTGATTCTCTCTCAAACAAGGTACATTCAAGATCTCCTTACTCGTCTCAATTTTCAACATCTCAAACCTGCTCCATCTCCTATGCTCACTGGCAAGCAACTCTCTCAATTTGATGGTGACCCCATGACTGATCCTCACCTTTATAGAAGCACTCTTGGCTCTCTTCAGTATCTCCAACATACTCAACCTGACATTGCCTTTGCGGTCAACAAACTCAGTCAATTCAATCAACATCCGACTATTCTCCATTGGCGGGCTCTCAAACGTGTTCTTCGTTATCTTCAAGGCACCATTCAACTTGGGTTATGTCTCTCTCCTGCTTCTTCCCTTTCTCTCACAGGCTACTCAAACGCGGATTGGGCCTCCTCCCTGGACGATCGCAAATCGGTTGGTGGTTATTGTATCTTCTTTGGTGATTCTCTTATTTCCTGGAGCTCTAAGAAGCAAGCTATCGTCGCTCGCTCTAGTACAGAATCTGAATACCGAGCTTTGTCTCATACAGCTTGTGAATTATTCTGGCTTCGTACGCTACTTCAGGATCTCGGAGTCTCTCTTGTCTCCTCCCCACTTATTTGGTGTGATAACATTTCTGCGGCTGCTCTTGCTCGAAATCCTGTCTTCCATGCTCGTACCAAGCACATAGAGATCGATGCTCATTTTATTCGGGATCAACTTTTGTCTCACCAACTCACCATCCGCCATGTTCGATCTCAAGATCAACTTGCCGACTCTCTTACCAAACCGTTGTCTCCACGTCTGTTCCAAGATCTTCGCAACATACTCGATCTTCGAACTTCTCCCGAGCCTCGTTTGAGGGGGGCTGTTGTGACATCCTCTACAGTTGGTAATATTGTTGGAAGTACAGTTCCCATTAATAGTCTGATAGCTTCTTAAGTTGACTTAAGTCCATTTATTGGATAACCATAAGTGTAATCTTCAGCCTACCTAATTTCCTGGTTAACTGGGATTTTTATTTTCTTAGTTGTGTGTTTAAGAAAGCTCCTCGGTGTATGTAAAAACATTCATTCCAGCAGTTGAAGTAAACAAGAAACAGAGAGCATTTACTTCTAACTTCTTCTTCCTCTTTAAATTCAAACTGTTGTTTTTGTTTTTGTTTTGTGAGATTAGTTAGAAGGGAGAGTATTATTTCAAAAAAAATTTGTGTTGGTTGCAGGCCTTGGGATATGCAGTGATGAGTGCTGGATTAGCTGCAGCTGGGATCTCAAATATGAATCGCACTGGCATTCGACTCATAACTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCACGTTGCCATCTCTATTGCCTTCACATTCTTTACCTGTTGCTTGCTCACCACTTCTGCCATCCAATACGTTATTTGGCTCTCCAAAAACTAAACCTCCTCACAAAAAACAAACTTTTTTGTCTCTGGGAAAACATACGATAAAGAATATGGCGCTTCTCTGTTCCTTCTGATTCCATGAAGTGTTCCTTAAATCAAGAGAAACTTGTATGGTATATATACATGGGAGCATCCCACTGTTTTTAGCTGAAATTGTTCATTTAGATAGTTATTAGTTGTTATATGGTGTATTAACTTTGATCTCGTGAGAATTTTAAAAGAGTAAGGTTTGTTTGAAACTCCCCAACTGTTTTGTAGCTTGAAATTTGAACTTTTAGAACTCAGAATGCACATAGTAATTTATGATGAAGGGAAACTTTTG

mRNA sequence

AACGAACACAGAATCCTCTCTCACGCACTCAGAGAGAATCTCAACGGAAAGATACGCCTGAAATTTTTCGAAAGACTGGTGAACGAAAAATGTCGTCGGTGCCGGAGGTGGCGGTGCAGCTACCGGAGACGACTAAGGTGGCGGCTATGGCGTCCGAGAGCAGCACAATCAACGAACTGATGGAACCGCCGGAGCGAAGCTTCGACCGTCTGAGAGCCGATTTGTATCAGTTAGCGCTGAGGCTGATTTGTATTGCTACGTCCACGACGGCAATGACGTTGATGGTTACCGCCAAGGAGTCTAGCACTGTTTCCATCTACGGATTTGAACTTCCCGTTCACTCCAAGTGGTCGTTCTCAGATGCATTCGAGTACCTTGTTGGAGTTTTAGCGGCTGTCGCTGCCTACTCTTTGTTGCAGTTGCTCGTTACTGCTTCCAAGCTTGCCAGGAAGTCCCCAGTTCTTAGCTCCAGAAGCTAAGCCTTGCTCATTTTCGCTATTGATCTGGCCTTGGGATATGCAGTGATGAGTGCTGGATTAGCTGCAGCTGGGATCTCAAATATGAATCGCACTGGCATTCGACTCATAACTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCACGTTGCCATCTCTATTGCCTTCACATTCTTTACCTGTTGCTTGCTCACCACTTCTGCCATCCAATACGTTATTTGGCTCTCCAAAAACTAAACCTCCTCACAAAAAACAAACTTTTTTGTCTCTGGGAAAACATACGATAAAGAATATGGCGCTTCTCTGTTCCTTCTGATTCCATGAAGTGTTCCTTAAATCAAGAGAAACTTGTATGGTATATATACATGGGAGCATCCCACTGTTTTTAGCTGAAATTGTTCATTTAGATAGTTATTAGTTGTTATATGGTGTATTAACTTTGATCTCGTGAGAATTTTAAAAGAGTAAGGTTTGTTTGAAACTCCCCAACTGTTTTGTAGCTTGAAATTTGAACTTTTAGAACTCAGAATGCACATAGTAATTTATGATGAAGGGAAACTTTTG

Coding sequence (CDS)

ATGTCGTCGGTGCCGGAGGTGGCGGTGCAGCTACCGGAGACGACTAAGGTGGCGGCTATGGCGTCCGAGAGCAGCACAATCAACGAACTGATGGAACCGCCGGAGCGAAGCTTCGACCGTCTGAGAGCCGATTTGTATCAGTTAGCGCTGAGGCTGATTTGTATTGCTACGTCCACGACGGCAATGACGTTGATGGTTACCGCCAAGGAGTCTAGCACTGTTTCCATCTACGGATTTGAACTTCCCGTTCACTCCAAGTGGTCGTTCTCAGATGCATTCGAGTACCTTGTTGGAGTTTTAGCGGCTGTCGCTGCCTACTCTTTGTTGCAGTTGCTCGTTACTGCTTCCAAGCTTGCCAGGAAGTCCCCAGTTCTTAGCTCCAGAAGCTAA

Protein sequence

MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTTAMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLARKSPVLSSRS
Homology
[Close]
BLAST of Lsi02G030030 vs. ExPASy Swiss-Prot
Match: B9RQG7 (CASP-like protein 3A1 OS=Ricinus communis OX=3988 GN=RCOM_1491260 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-26
Identity = 78/131 (59.54%), Postives = 94/131 (71.76%), Query Frame = 0 

Query: 6   EVAVQLPETTKVAAMASESSTINELMEPP-------ERSFDRLRADLYQLALRLICIATS 65
           EVAVQLPE +KVAA  +     NE M  P        + F R +AD+  + LRL+C  TS
Sbjct: 8   EVAVQLPE-SKVAATEN-----NETMSGPLVVGGGVAKPFGR-KADVMHVILRLLCTITS 67

Query: 66  TTAMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKL 125
            TA++ MVTA +SSTVSIYGF LPV SKWSFS +FEYLVGV AAVAA+SLLQLL++ S+L
Sbjct: 68  VTAVSFMVTAHQSSTVSIYGFMLPVRSKWSFSHSFEYLVGVSAAVAAHSLLQLLISMSRL 127

Query: 126 ARKSPVLSSRS 130
            RKSPV+ SRS
Sbjct: 128 LRKSPVIPSRS 131

[Close]
BLAST of Lsi02G030030 vs. ExPASy Swiss-Prot
Match: A7P756 (CASP-like protein 3A1 OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03780 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.7e-26
Identity = 68/131 (51.91%), Postives = 98/131 (74.81%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPP--ERSFDRLRADLYQLALRLICIATS 60
           + + PE+ +QLPE    A +A+E+ T++  + PP  +RS  R   D+  + LR +C+ TS
Sbjct: 4   LKTPPEIGIQLPE----AKVAAETGTMSGPLVPPRSDRSV-RRGTDVAHVVLRFVCLLTS 63

Query: 61  TTAMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKL 120
             A++LM TAKE++++SIYGF LPV SKWSFSD+FEYLVGV AAVAA++LLQL+++ S+L
Sbjct: 64  VIALSLMATAKEAASISIYGFLLPVSSKWSFSDSFEYLVGVSAAVAAHALLQLIISVSRL 123

Query: 121 ARKSPVLSSRS 130
            RKSPV+ SR+
Sbjct: 124 LRKSPVIPSRN 129

[Close]
BLAST of Lsi02G030030 vs. ExPASy Swiss-Prot
Match: B9GXD6 (CASP-like protein 3A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_553757 PE=3 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 4.8e-24
Identity = 73/136 (53.68%), Postives = 94/136 (69.12%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELM-------EPPERSFDRLRADLYQLALRLI 60
           ++   EVAVQLPE +KVAA     +    L+           R F R +A++  + LRL+
Sbjct: 8   LAPAAEVAVQLPE-SKVAADNISGTMSGPLVGASGGGTTAAMRPFGR-KAEVMHVLLRLL 67

Query: 61  CIATSTTAMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLV 120
           CI TS  A++ M TA++SST+SIYGF LPV SKWSFS +FEYLVGV AAVAA+SLLQLL+
Sbjct: 68  CIITSVAALSFMFTAQQSSTISIYGFMLPVQSKWSFSHSFEYLVGVSAAVAAHSLLQLLI 127

Query: 121 TASKLARKSPVLSSRS 130
           + S+L RKSPV+ SRS
Sbjct: 128 SMSRLLRKSPVIPSRS 141

[Close]
BLAST of Lsi02G030030 vs. ExPASy Swiss-Prot
Match: B9GGL4 (CASP-like protein 3A2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_751837 PE=2 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-23
Identity = 66/124 (53.23%), Postives = 88/124 (70.97%), Query Frame = 0 

Query: 6   EVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTTAMTLM 65
           EVAVQLPE+  V      ++          R F R +A++  + LR++C+ TS  A++ M
Sbjct: 12  EVAVQLPESKMVTENIGGAAA-------AMRPFGR-KAEVMNVLLRVLCMVTSVAALSSM 71

Query: 66  VTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLARKSPVL 125
           VTA++SSTVSIYGF LP+ SKWSFS +FEY+VGV A VAA+SLLQLL++ S+L RKSPV+
Sbjct: 72  VTAQQSSTVSIYGFMLPIQSKWSFSHSFEYVVGVSAVVAAHSLLQLLISVSRLLRKSPVI 127

Query: 126 SSRS 130
            SRS
Sbjct: 132 QSRS 127

[Close]
BLAST of Lsi02G030030 vs. ExPASy Swiss-Prot
Match: Q3EB59 (CASP-like protein 3A1 OS=Arabidopsis thaliana OX=3702 GN=At3g16300 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15
Identity = 43/88 (48.86%), Postives = 64/88 (72.73%), Query Frame = 0 

Query: 42  RADLYQLALRLICIATSTTAMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLA 101
           R D+    LR +C+A ST A+TLMVTA+E+S  ++YGFE  +H+ WS SD+  YLV V +
Sbjct: 43  RNDVAMFVLRAMCMAVSTVAVTLMVTARETSMTTLYGFEFQLHAVWSLSDSLIYLVVVSS 102

Query: 102 AVAAYSLLQLLVTASKLARKSPVLSSRS 130
           A   YSL+QL+++ ++L RKSPV+ +R+
Sbjct: 103 ATVLYSLIQLIISGTRLMRKSPVIPTRT 130

[Close]
BLAST of Lsi02G030030 vs. ExPASy TrEMBL
Match: A0A6J1DBL6 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111019195 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 106/129 (82.17%), Postives = 112/129 (86.82%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           M SVPEVA+QLPETTKVAA ASES  I+  MEPPER+F RLRADLYQL LRL+CIATS T
Sbjct: 7   MPSVPEVALQLPETTKVAATASESGKISGPMEPPERNFGRLRADLYQLVLRLLCIATSAT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
           A+ LMVTAKE+STVSIYGFELPVHSKWSFSDAFEYLVGV    AAYSLLQLLVTASKL R
Sbjct: 67  AVALMVTAKEASTVSIYGFELPVHSKWSFSDAFEYLVGVSGTAAAYSLLQLLVTASKLFR 126

Query: 121 KSPVLSSRS 130
           KSPV  SRS
Sbjct: 127 KSPVHCSRS 135

[Close]
BLAST of Lsi02G030030 vs. ExPASy TrEMBL
Match: A0A6J1KMH1 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494645 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44
Identity = 106/129 (82.17%), Postives = 111/129 (86.05%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           MSSVPEVAVQLPE TKVAAMAS+S TI  L+EP +RS DRLRADL QL LRLIC+ATS T
Sbjct: 7   MSSVPEVAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLICVATSVT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
           AM+LMVTA ESSTVSIYGFELPVHS WSFSD FEYLVGV  AVA YSLLQLLVT SKL R
Sbjct: 67  AMSLMVTAAESSTVSIYGFELPVHSNWSFSDVFEYLVGVSGAVAVYSLLQLLVTTSKLIR 126

Query: 121 KSPVLSSRS 130
           KSPVL SRS
Sbjct: 127 KSPVLGSRS 135

[Close]
BLAST of Lsi02G030030 vs. ExPASy TrEMBL
Match: A0A6J1HHN1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464155 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.3e-44
Identity = 106/128 (82.81%), Postives = 111/128 (86.72%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           MSSV EVAVQLPE TKVAAMAS+S TI  L+EP +RS DRLRADL QL LRLIC+ATS T
Sbjct: 7   MSSVSEVAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLICVATSVT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
           AM+LMVTA ESSTVSIYGFELPVHSKWSFSD FEYLVGV  AVAAYSLLQLLVT SKL R
Sbjct: 67  AMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVTTSKLVR 126

Query: 121 KSPVLSSR 129
           KSPVL SR
Sbjct: 127 KSPVLGSR 134

[Close]
BLAST of Lsi02G030030 vs. ExPASy TrEMBL
Match: A0A5A7U5A3 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00190 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-43
Identity = 102/129 (79.07%), Postives = 111/129 (86.05%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           M   PE AV+LPETTKVAA+ASES   +  MEPP+R FDRLRADLYQLALRLICIATSTT
Sbjct: 7   MPPAPEAAVRLPETTKVAAIASESGRTSRPMEPPDRRFDRLRADLYQLALRLICIATSTT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
            + LMVTAK+S+TVSIYGFE PV SKWSFS+ FEYLVGV  AVAAYSLLQLLVTAS LAR
Sbjct: 67  TVALMVTAKDSTTVSIYGFEFPVQSKWSFSNVFEYLVGVSGAVAAYSLLQLLVTASMLAR 126

Query: 121 KSPVLSSRS 130
           +SPVLSSRS
Sbjct: 127 RSPVLSSRS 135

[Close]
BLAST of Lsi02G030030 vs. ExPASy TrEMBL
Match: A0A1S3CGY3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500792 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42
Identity = 101/129 (78.29%), Postives = 111/129 (86.05%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           M   PE AV+LPETT+VAA+ASES   +  MEPP+R FDRLRADLYQLALRLICIATSTT
Sbjct: 7   MPPAPEAAVRLPETTEVAAIASESGRTSRPMEPPDRRFDRLRADLYQLALRLICIATSTT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
            + LMVTAK+S+TVSIYGFE PV SKWSFS+ FEYLVGV  AVAAYSLLQLLVTAS LAR
Sbjct: 67  TVALMVTAKDSTTVSIYGFEFPVQSKWSFSNVFEYLVGVSGAVAAYSLLQLLVTASMLAR 126

Query: 121 KSPVLSSRS 130
           +SPVLSSRS
Sbjct: 127 RSPVLSSRS 135

[Close]
BLAST of Lsi02G030030 vs. NCBI nr
Match: XP_038899301.1 (CASP-like protein 3A1 [Benincasa hispida])

HSP 1 Score: 203.8 bits (517), Expect = 9.2e-49
Identity = 115/129 (89.15%), Postives = 118/129 (91.47%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           M SVPE+AVQLPETTKVAAMASES TI+  ME PERS DRLRADLYQL LRLICIATSTT
Sbjct: 7   MPSVPEMAVQLPETTKVAAMASESGTISGPMERPERSLDRLRADLYQLVLRLICIATSTT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
           AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGV  AVAAYSLLQLL+TAS L R
Sbjct: 67  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVSGAVAAYSLLQLLLTASMLVR 126

Query: 121 KSPVLSSRS 130
           KSPVLSSRS
Sbjct: 127 KSPVLSSRS 135

[Close]
BLAST of Lsi02G030030 vs. NCBI nr
Match: KAG7025825.1 (CASP-like protein 3A1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 190.7 bits (483), Expect = 8.1e-45
Identity = 107/129 (82.95%), Postives = 113/129 (87.60%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           MSSVPEVAVQ+PE TKVAAMAS+S TI  L+EP +RS DRLRADL QL LRLIC+ATS T
Sbjct: 7   MSSVPEVAVQVPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLICVATSVT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
           AM+LMVTA ESSTVSIYGFELPVHSKWSFSD FEYLVGV  AVAAYSLLQLLVT SKL R
Sbjct: 67  AMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVTTSKLVR 126

Query: 121 KSPVLSSRS 130
           KSPVL SRS
Sbjct: 127 KSPVLGSRS 135

[Close]
BLAST of Lsi02G030030 vs. NCBI nr
Match: XP_022151223.1 (CASP-like protein 3A1 [Momordica charantia])

HSP 1 Score: 188.7 bits (478), Expect = 3.1e-44
Identity = 106/129 (82.17%), Postives = 112/129 (86.82%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           M SVPEVA+QLPETTKVAA ASES  I+  MEPPER+F RLRADLYQL LRL+CIATS T
Sbjct: 7   MPSVPEVALQLPETTKVAATASESGKISGPMEPPERNFGRLRADLYQLVLRLLCIATSAT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
           A+ LMVTAKE+STVSIYGFELPVHSKWSFSDAFEYLVGV    AAYSLLQLLVTASKL R
Sbjct: 67  AVALMVTAKEASTVSIYGFELPVHSKWSFSDAFEYLVGVSGTAAAYSLLQLLVTASKLFR 126

Query: 121 KSPVLSSRS 130
           KSPV  SRS
Sbjct: 127 KSPVHCSRS 135

[Close]
BLAST of Lsi02G030030 vs. NCBI nr
Match: XP_023000388.1 (CASP-like protein 3A1 [Cucurbita maxima])

HSP 1 Score: 188.0 bits (476), Expect = 5.2e-44
Identity = 106/129 (82.17%), Postives = 111/129 (86.05%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           MSSVPEVAVQLPE TKVAAMAS+S TI  L+EP +RS DRLRADL QL LRLIC+ATS T
Sbjct: 7   MSSVPEVAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLICVATSVT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
           AM+LMVTA ESSTVSIYGFELPVHS WSFSD FEYLVGV  AVA YSLLQLLVT SKL R
Sbjct: 67  AMSLMVTAAESSTVSIYGFELPVHSNWSFSDVFEYLVGVSGAVAVYSLLQLLVTTSKLIR 126

Query: 121 KSPVLSSRS 130
           KSPVL SRS
Sbjct: 127 KSPVLGSRS 135

[Close]
BLAST of Lsi02G030030 vs. NCBI nr
Match: XP_022964006.1 (CASP-like protein 3A1 [Cucurbita moschata])

HSP 1 Score: 187.2 bits (474), Expect = 8.9e-44
Identity = 106/128 (82.81%), Postives = 111/128 (86.72%), Query Frame = 0 

Query: 1   MSSVPEVAVQLPETTKVAAMASESSTINELMEPPERSFDRLRADLYQLALRLICIATSTT 60
           MSSV EVAVQLPE TKVAAMAS+S TI  L+EP +RS DRLRADL QL LRLIC+ATS T
Sbjct: 7   MSSVSEVAVQLPEMTKVAAMASKSGTIGGLIEPSDRSLDRLRADLCQLMLRLICVATSVT 66

Query: 61  AMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAVAAYSLLQLLVTASKLAR 120
           AM+LMVTA ESSTVSIYGFELPVHSKWSFSD FEYLVGV  AVAAYSLLQLLVT SKL R
Sbjct: 67  AMSLMVTAAESSTVSIYGFELPVHSKWSFSDVFEYLVGVSGAVAAYSLLQLLVTTSKLVR 126

Query: 121 KSPVLSSR 129
           KSPVL SR
Sbjct: 127 KSPVLGSR 134

[Close]
BLAST of Lsi02G030030 vs. TAIR 10
Match: AT3G16300.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 84.3 bits (207), Expect = 7.6e-17
Identity = 43/88 (48.86%), Postives = 64/88 (72.73%), Query Frame = 0 

Query: 42  RADLYQLALRLICIATSTTAMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLA 101
           R D+    LR +C+A ST A+TLMVTA+E+S  ++YGFE  +H+ WS SD+  YLV V +
Sbjct: 43  RNDVAMFVLRAMCMAVSTVAVTLMVTARETSMTTLYGFEFQLHAVWSLSDSLIYLVVVSS 102

Query: 102 AVAAYSLLQLLVTASKLARKSPVLSSRS 130
           A   YSL+QL+++ ++L RKSPV+ +R+
Sbjct: 103 ATVLYSLIQLIISGTRLMRKSPVIPTRT 130

[Close]
BLAST of Lsi02G030030 vs. TAIR 10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 44  DLYQLALRLICIATSTTAMTLMVTAKESSTVSIYGFELPVHSKWSFSDAFEYLVGVLAAV 103
           +L Q+ALR  C+A S TAM +M+TA E     IYGF+L + S WSFS +++Y+VG  A  
Sbjct: 21  ELVQVALRGGCLAASATAMAVMLTATEEGVADIYGFKLTLSSNWSFSPSYQYVVGACAGT 80

Query: 104 AAYSLLQLLVTASKLARKSPVLSSR 129
             YSLLQL +   +L   SP+  SR
Sbjct: 81  VLYSLLQLCLGVYRLVTGSPITPSR 105

The following BLAST results are available for this feature:
BLAST of Lsi02G030030 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B9RQG73.9e-2659.54CASP-like protein 3A1 OS=Ricinus communis OX=3988 GN=RCOM_1491260 PE=2 SV=1[more]
A7P7568.7e-2651.91CASP-like protein 3A1 OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03780 PE=2 SV=1[more]
B9GXD64.8e-2453.68CASP-like protein 3A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_553757 PE=3 S... [more]
B9GGL42.4e-2353.23CASP-like protein 3A2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_751837 PE=2 S... [more]
Q3EB591.1e-1548.86CASP-like protein 3A1 OS=Arabidopsis thaliana OX=3702 GN=At3g16300 PE=3 SV=1[more]
BLAST of Lsi02G030030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DBL61.5e-4482.17CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111019195 PE=3 SV=1[more]
A0A6J1KMH12.5e-4482.17CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494645 PE=3 SV=1[more]
A0A6J1HHN14.3e-4482.81CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464155 PE=3 SV=1[more]
A0A5A7U5A34.8e-4379.07CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00... [more]
A0A1S3CGY31.4e-4278.29CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500792 PE=3 SV=1[more]
BLAST of Lsi02G030030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899301.19.2e-4989.15CASP-like protein 3A1 [Benincasa hispida][more]
KAG7025825.18.1e-4582.95CASP-like protein 3A1 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022151223.13.1e-4482.17CASP-like protein 3A1 [Momordica charantia][more]
XP_023000388.15.2e-4482.17CASP-like protein 3A1 [Cucurbita maxima][more]
XP_022964006.18.9e-4482.81CASP-like protein 3A1 [Cucurbita moschata][more]
BLAST of Lsi02G030030 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G16300.17.6e-1748.86Uncharacterised protein family (UPF0497) [more]
AT1G79780.12.3e-1347.06Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 44..125
e-value: 3.1E-16
score: 59.5
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 48..122
e-value: 2.0E-11
score: 41.9
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 4..129
NoneNo IPR availablePANTHERPTHR11615:SF243CASP-LIKE PROTEIN 3A2coord: 4..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G030030.1Lsi02G030030.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding