Lsi02G030000 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAAGCCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGTCAGCCAATAACCCGTTACAATGCAACCCACTATTATTTTCTATTTTTATTTTTAAATATATAATATAATTTATTTGTTTATGGTTTTTTGTGTTTTGGTTGGGCAGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAACCCAGCGAAGCCTCTCTTGTATTGATTGATGTATGTGTTTCATTTACTAACGATATCTAATGTCATGATAGGATTTTTCTTAATTATGACATATTTGGAAGGGAAACTTTTGTAATATTAATATTCCAAAGTATTATAGGTATGTTTTTAGTCAGTCAAAATCAATTTAAATACTTGATTTTTCTACATTTAAACATAGTTTTCTTATTATAAAAATTGATATTGGATAATTGAAAGCATATGTTTTTAGAGTGATTTGAACCTGACAAAAGTGAATTTAATAATTTAAAAATTACTCCTAAATATACCATCAGTTCATCACTTGTGAAGTTTTTTTTGTTTTTTTTGTTTTTTTTTTAATCAAGAATCATTTAAGAATATAGTTATGATTCGGGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAGTCCATAAACTTTTAATTTTGTGTATAATAAAGTCATAACATATATATTTTTTAATATTAATTGGTCTATTTAATATAAATTAAATTTAAAATTTATGTAGAATGAAATTTTAAACTTTCAATTTTGTGTATAGTAAGTCCATAAACTTTTAATTTTGTGTATAATAAAGTCATAACATATATATTTTTTAATATTAATTGGTCTATTTAATATAAATTAAATTTAAAATTTATGTAGAATGAAATTTTAAACTTTCAATTTTGTGTATAGTAAATCCGTAAATTTTAAAAAAGATCAAGAGTCTAATTACACAAAAATTAAAATTGAAAAGTTAGAGACCTAGAATAAAACATAAAGTTTCAAAACTTAATAGTCTTTTTAAAAAAGTTAGGAATTTATTAGACACAACTTCAAAGTTTATGAACCAAAATTGTAATTGAACCAACTATTAAAATAATTTATTATTTAATATTTCTTTATTATTTGATAATAAGTGGGGTGGAATTTAAAAGATGTATTATTAATATAAATATTCGTGTTAATTCTTACAAGTACTTTATGTAACTTTCTCTGTTATATTTTTCCATTCTAATTGATATGAGAGTTTAGATCGTGGAAAGATTCAAACCGATGAACTATATGCATGAAAGAGGAGGAGAACCACAATCGTCACTGCCACCCCCACCGCCACCGCCGTCATTGGGAGATATTAAGGAAGAAAGAGGAAGATGTCAGTGCTCTTACATTTCTACTGAATCCCCAAATCAACTGCAGTTGGTCAAGGAACCCCTTTCAGCTCCATTTTGA ATGGCTAAGCCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAACCCAGCGAAGCCTCTCTTGTATTGATTGATATCGTGGAAAGATTCAAACCGATGAACTATATGCATGAAAGAGGAGGAGAACCACAATCGTCACTGCCACCCCCACCGCCACCGCCGTCATTGGGAGATATTAAGGAAGAAAGAGGAAGATGTCAGTGCTCTTACATTTCTACTGAATCCCCAAATCAACTGCAGTTGGTCAAGGAACCCCTTTCAGCTCCATTTTGA ATGGCTAAGCCTAATAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAACCCAGCGAAGCCTCTCTTGTATTGATTGATATCGTGGAAAGATTCAAACCGATGAACTATATGCATGAAAGAGGAGGAGAACCACAATCGTCACTGCCACCCCCACCGCCACCGCCGTCATTGGGAGATATTAAGGAAGAAAGAGGAAGATGTCAGTGCTCTTACATTTCTACTGAATCCCCAAATCAACTGCAGTTGGTCAAGGAACCCCTTTCAGCTCCATTTTGA MAKPNNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKPMNYMHERGGEPQSSLPPPPPPPSLGDIKEERGRCQCSYISTESPNQLQLVKEPLSAPF Homology
BLAST of Lsi02G030000 vs. ExPASy TrEMBL
Match: A0A6J1JTK7 (uncharacterized protein LOC111488747 OS=Cucurbita maxima OX=3661 GN=LOC111488747 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 5.7e-40 Identity = 92/123 (74.80%), Postives = 100/123 (81.30%), Query Frame = 0
BLAST of Lsi02G030000 vs. ExPASy TrEMBL
Match: A0A6J1GPS6 (uncharacterized protein LOC111456424 OS=Cucurbita moschata OX=3662 GN=LOC111456424 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 5.9e-37 Identity = 86/122 (70.49%), Postives = 95/122 (77.87%), Query Frame = 0
BLAST of Lsi02G030000 vs. ExPASy TrEMBL
Match: A0A1S3CH00 (uncharacterized protein LOC103500790 OS=Cucumis melo OX=3656 GN=LOC103500790 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.4e-35 Identity = 89/119 (74.79%), Postives = 97/119 (81.51%), Query Frame = 0
BLAST of Lsi02G030000 vs. ExPASy TrEMBL
Match: A0A0A0K9S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452980 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.0e-29 Identity = 78/115 (67.83%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of Lsi02G030000 vs. ExPASy TrEMBL
Match: A0A6J1DD75 (uncharacterized protein LOC111019960 OS=Momordica charantia OX=3673 GN=LOC111019960 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 3.2e-27 Identity = 72/113 (63.72%), Postives = 80/113 (70.80%), Query Frame = 0
BLAST of Lsi02G030000 vs. NCBI nr
Match: XP_038898732.1 (uncharacterized protein LOC120086256 [Benincasa hispida]) HSP 1 Score: 197.6 bits (501), Expect = 5.8e-47 Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of Lsi02G030000 vs. NCBI nr
Match: XP_022992446.1 (uncharacterized protein LOC111488747 [Cucurbita maxima]) HSP 1 Score: 173.3 bits (438), Expect = 1.2e-39 Identity = 92/123 (74.80%), Postives = 100/123 (81.30%), Query Frame = 0
BLAST of Lsi02G030000 vs. NCBI nr
Match: XP_023521779.1 (uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo] >XP_023549181.1 uncharacterized protein LOC111807614 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39 Identity = 91/121 (75.21%), Postives = 98/121 (80.99%), Query Frame = 0
BLAST of Lsi02G030000 vs. NCBI nr
Match: KAG6575517.1 (hypothetical protein SDJN03_26156, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014056.1 hypothetical protein SDJN02_24228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 165.2 bits (417), Expect = 3.2e-37 Identity = 89/125 (71.20%), Postives = 97/125 (77.60%), Query Frame = 0
BLAST of Lsi02G030000 vs. NCBI nr
Match: XP_022954046.1 (uncharacterized protein LOC111456424 [Cucurbita moschata]) HSP 1 Score: 163.3 bits (412), Expect = 1.2e-36 Identity = 86/122 (70.49%), Postives = 95/122 (77.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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