Lsi02G029920 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G029920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like
Location	chr02: 36011813 .. 36015757 (+)
RNA-Seq Expression	Lsi02G029920
Synteny	Lsi02G029920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTATCGAAATTCGTCAAGGGTTTTAGATGACTCTCCATTCGAATTCACACTAGCTGAGGCAAGTTCTTATGTTATGCTTGAGTCATGTCTTTCAATCGATGCTTCCGAGTTTAGTTTCCCTGTTCGAGTTATGTGCAGAAATTCATTACAGCATTTTCTGTTTTGTAATTACCGATTTCGATTCATTCTGCCGTTAATTTTGCAGATTGTAGAGATGGATAATATCTTGAAGGACTCTGGAGATCAAACACTTGGTCAAGAGTTTTTCCAAGATGTCGCACTTCATTTCAGGTTATATAGGGAATTTTTCTAAAAGCTTCGATCGCTTCTTCAAACCAGTATTTGTGCAATCAATCATCGTGTCTTTCTTTTTCATGTTCGCTCTTTCTTGCAGTTGCTCCCCGTGGCGCGCTGGAAAATCTCCCGTCACTGCGGAACAGGTATTCGATTTTTCCTTATCCGCATTCTACTTTGTTCATTGTTTTCGTGATACTTGGTCATTCTTATGTGCCCTAGGTGCATGGCTGGTTTGAGAATCGGAAAAAGGAATTGCGAAGTAGTTGTAAAAAAGCTCGGCCTCCACCTCCACCTCCACTTCCACCTCCGCCATCACCTCCGCCTCCGACTCCGCCACCGAAACTTTTGCTTTATCATTCGGAGAGTAATTTTTTAACTGACGCGCCTTCATCTGAACCACCTGAATTCAAAGGTAAAATTCCGCATTATTAGCTGATGAATTTTAGAAATTCTATCCGAAGTTCTCCTTTGCACTGCCAATGCAACAACCAGTTGCTGCGGCTATAGGTATATACATAGTTTTATATATTTTTGCTTCTACGATGGTTTTCTTTTATTCTGTTGCACGATACTAGGCTGGTAGAGGGAGGGGCTGCACAGTGATTGGTAACTCATTCGTGTCTAGAATTATGTGCTCGATGTTTGGAGATTTAGTCGTGCTTAGATAATCTTGTCTTTTATCAAGAGATATTAAGCAGAAAGATCCATAGGCGATGAAACTTCAAACTCGCAAACCTTCTTGCATCGAATGCCGAGTACATTTAGAATTTCTTCCTTGTGAACTGAAAACTGCAGTGTGTCCTTGCATGATCCAAGCTTTGTCCAAGATACTATAATTTGCAGTTCTGGAGTAATTTTTACTTTCGATACATGTTGGCAAACTTGAAATCTGTGCAGTTCCAAATCAAACTATTAACTTTTTGTAATATCATTTCTTGAAATTTAATGCAGGCAAGGCAACTGATCTTTCAGAATTAGCATTTGAAGCCTTTTCGTCAAGAGACCATGCCTGGTGAGAAAAATATAGAGCAGAGAATACAAAACTGTTAGCTTGATCTGTGATGGAATCATATGTTCATATTCACACAATTTCCATGGATTCTAAACTGTAAATGACATCTTGAATCCACTGGAATACATAGGTAGTCGGTGAGTTCTCCCTAGTCAGCTCAGATGTAGCACCTCAGTTTAGCTATCCATAATCCTAGCTAGCATTGTACAAGTGCCTTAAGTTTATTTCATTTTACACTTGGAATAACTAGTGCAACACAAATCTCCCTATAAACAATGCTAACTTCTCAGACATCTATTACTTGCAGTCATTCAGGATGTTACACCCTTGATAATGATGTGCCAAAGACTGACATTCAGTTCAGATCCTTTAAGAAGGCTTTGCAAAAGTTGGGATTTGGGTCATTTAGCTCTACAGAGTTAGAAACAAAGTTATTGACTGCAATGATATTTACATGCTAACTTCTGTGCAAATGTGTTAATAATCAGTCTTTGATTTTTATCATCTATATGGAGCTTTTATACTCGATTTTCTTACCCTAATGCCAGTGTAAAGTTGATGTTTCATGGACACTGTTGGGTGCTATACATGTCCAAACCATAAAAGCTTTAGCATTATTTCCTGCTTCGTCTAACCCATAATGTTTATGTTGTGTTATCTTGCTCAACGAACAGTCAGTGTCATCATTGAGATGTATCCATTACTTTTGTTGGTGTATGGTATATGGGCAATGACATAGATAATGGACCTATCATATATCATTATCTTATGAGAAGATGTTATTAGACGCGTCTCTCTTCAATTATCAACTTGATGGTTTACAGAAAAGCCATTGATATTTGAAGATTCATATTATTTTGCTTTCAGCAAGCACTGTTACTGCATAATCAGTTTTGGTTAAGACTCATGTTTTTCTATTGAATTGAAAAATCATACTAATGTTCTTTTGATTCCTTAGGTATGATGTTGCTTCCTTCCTCAGTTACCGAGTTAATTGCCATGGAGAACTAGTAAGATTTTTCCCACACATTTCATATACTTCTTTCGACAGTTGCTGTAGGTTGCAAATGCACAAAATACGTCATTGTTTTCCACTCACTGGTTTATCATTATGAAACCACCGGAAAAAGTCAGCAAATGTTTAGACGTTGAAGAGAAAAGCCTCATGATCTGTTGTGCTTTTTATGCTATTGCATTGGAACAAACTTCACAGGATGCTCGAGTTCGTTATGCTGGCTTTGGAAAGGATGAGGATGAGTGGGTTAATGTTGCAAGAGGAGTGCGTGATCGATCCATACCTTTGGAATCTTCAGAGTGTTACAGAGTGAAAGTTGGAGATCTTGTGTTATGTTACCGGGTAATTCTATGTTTCCAGTTTTATTTATTTATTATTATTTTATTGATATATGAAAAGGAAGAAAAAAGTAAAAGAAAGTAAAAACCAAACAGAACTGACGAGAACTGGAAAAGAAGGAACCACACGCACACAAAAAAAGGCAAAAAAAACACCGAAAAGCAAAGGAAGAGAAACAATACAGGATTGGAGCTGCCACAAAACAAAACAGACGAGCCAAATAACCAACAGCCGGCTGGAACATTTTTTTTAAAAAAATGTCTTCATAGGTGACCCTTGGAATTCTATGTTCCCAAATTTTCTCCTCCCAAATTGAGTTTTCTTAGCGAGGAGTGTATGCGAATTTTTCAAGCAACAAATAGTCTGGCTACCAGAATAGCTTTGTACTGAACTATAATTACTTATTATTATTATTATTAGGAAAATTTTAACGGATAAAAAAATGTCAAACTATTTACAGAAAATAGCAAAAAAATACTGATAGATATTGATAGATTTCTATCCGCATTTATCAGTGATAGACTTGTTGACCAAACAAACAATTGTCAGCAAAGTTGTTTCTTTTTTTTTTCTTGAAATCCAAAGAATTTTTCTTACTTTATACATAACATAGGTCATCGATTCAACATTGGATAAAAAAGAAAAAAATAGGGTGAAATCCTCATTTTTTTTAGTTTTTTACAAAAAAAAATTCTAATATTCTATTAAAATATAAAATAATAAAAAAGGGATTTAGATAGACCCTAATAGACTTCTATCAACGTCTATCACAACTATTTAAAAAATTTTGTTATTTTGTGGAAATAGTTTTCCTTATTTTTCTATTTTTTAAAACTCCTCTTATTGTTATTATAAGTAAACTAAAATGATCATCATAATAAAAATGGGGAAAGAAGTCCTTAGTGCGACAAATGTTTCAGATCATGTAATCTAACCTTGGAAAGTTTTATGGCTTATTTACACACAGGAAGGACAAGATCATGCACTCTACTTCGATGCATATGTTGTGGAAATTCAGAGGAGGCTACACGATATTGGGGGTTGTCGATGCATATTTGTTGTACGCTACGACTATGATCACTATGAGGTAGAAAGCCAACCAATAGAAATTTGTCCAATTTTACTTGAAACGAATACTCAGATTCTTATGCTGCTGCCTTTTTGGCTTAGGAAAAAGTTCATTTGGGGAGATTGTGCTGCAGGCCTTCGGCATACAACTCCGACCAAATTTGATGTATATGAAATTCCGAATCTTCATCCTCACAAAGTACATTTAG

mRNA sequence

ATGGAGTATCGAAATTCGTCAAGGGTTTTAGATGACTCTCCATTCGAATTCACACTAGCTGAGGCAAGTTCTTATGTTATGCTTGAGTCATGTCTTTCAATCGATGCTTCCGAGTTTAGTTTCCCTGTTCGAGTTATGTGCAGAAATTCATTACAGCATTTTCTGTTTTGTAATTACCGATTTCGATTCATTCTGCCGTTAATTTTGCAGATTGTAGAGATGGATAATATCTTGAAGGACTCTGGAGATCAAACACTTGGTCAAGAGTTTTTCCAAGATGTCGCACTTCATTTCAGTTGCTCCCCGTGGCGCGCTGGAAAATCTCCCGTCACTGCGGAACAGGTGCATGGCTGGTTTGAGAATCGGAAAAAGGAATTGCGAAGTAGTTGTAAAAAAGCTCGGCCTCCACCTCCACCTCCACTTCCACCTCCGCCATCACCTCCGCCTCCGACTCCGCCACCGAAACTTTTGCTTTATCATTCGGAGAGTAATTTTTTAACTGACGCGCCTTCATCTGAACCACCTGAATTCAAAGGCAAGGCAACTGATCTTTCAGAATTAGCATTTGAAGCCTTTTCGTCAAGAGACCATGCCTGTCATTCAGGATGTTACACCCTTGATAATGATGTGCCAAAGACTGACATTCAGTTCAGATCCTTTAAGAAGGCTTTGCAAAAGTTGGGATTTGGGTCATTTAGCTCTACAGAGTATGATGTTGCTTCCTTCCTCAGTTACCGAGTTAATTGCCATGGAGAACTAGATGCTCGAGTTCGTTATGCTGGCTTTGGAAAGGATGAGGATGAGTGGGTTAATGTTGCAAGAGGAGTGCGTGATCGATCCATACCTTTGGAATCTTCAGAGTGTTACAGAGTGAAAGTTGGAGATCTTGTGTTATGTTACCGGGAAGGACAAGATCATGCACTCTACTTCGATGCATATGTTGTGGAAATTCAGAGGAGGCTACACGATATTGGGGGTTGTCGATGCATATTTGTTGTACGCTACGACTATGATCACTATGAGGCCTTCGGCATACAACTCCGACCAAATTTGATGTATATGAAATTCCGAATCTTCATCCTCACAAAGTACATTTAG

Coding sequence (CDS)

ATGGAGTATCGAAATTCGTCAAGGGTTTTAGATGACTCTCCATTCGAATTCACACTAGCTGAGGCAAGTTCTTATGTTATGCTTGAGTCATGTCTTTCAATCGATGCTTCCGAGTTTAGTTTCCCTGTTCGAGTTATGTGCAGAAATTCATTACAGCATTTTCTGTTTTGTAATTACCGATTTCGATTCATTCTGCCGTTAATTTTGCAGATTGTAGAGATGGATAATATCTTGAAGGACTCTGGAGATCAAACACTTGGTCAAGAGTTTTTCCAAGATGTCGCACTTCATTTCAGTTGCTCCCCGTGGCGCGCTGGAAAATCTCCCGTCACTGCGGAACAGGTGCATGGCTGGTTTGAGAATCGGAAAAAGGAATTGCGAAGTAGTTGTAAAAAAGCTCGGCCTCCACCTCCACCTCCACTTCCACCTCCGCCATCACCTCCGCCTCCGACTCCGCCACCGAAACTTTTGCTTTATCATTCGGAGAGTAATTTTTTAACTGACGCGCCTTCATCTGAACCACCTGAATTCAAAGGCAAGGCAACTGATCTTTCAGAATTAGCATTTGAAGCCTTTTCGTCAAGAGACCATGCCTGTCATTCAGGATGTTACACCCTTGATAATGATGTGCCAAAGACTGACATTCAGTTCAGATCCTTTAAGAAGGCTTTGCAAAAGTTGGGATTTGGGTCATTTAGCTCTACAGAGTATGATGTTGCTTCCTTCCTCAGTTACCGAGTTAATTGCCATGGAGAACTAGATGCTCGAGTTCGTTATGCTGGCTTTGGAAAGGATGAGGATGAGTGGGTTAATGTTGCAAGAGGAGTGCGTGATCGATCCATACCTTTGGAATCTTCAGAGTGTTACAGAGTGAAAGTTGGAGATCTTGTGTTATGTTACCGGGAAGGACAAGATCATGCACTCTACTTCGATGCATATGTTGTGGAAATTCAGAGGAGGCTACACGATATTGGGGGTTGTCGATGCATATTTGTTGTACGCTACGACTATGATCACTATGAGGCCTTCGGCATACAACTCCGACCAAATTTGATGTATATGAAATTCCGAATCTTCATCCTCACAAAGTACATTTAG

Protein sequence

MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYRFRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFENRKKELRSSCKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPEFKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTEYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYEAFGIQLRPNLMYMKFRIFILTKYI

Homology

[Close]

BLAST of Lsi02G029920 vs. ExPASy Swiss-Prot
Match: Q9XI47 (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.5e-43
Identity = 109/272 (40.07%), Postives = 149/272 (54.78%), Query Frame = 0


Query: 70  QIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFENRKKELRSS 129
           +IV+M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKS +T +QV  WF+ + K     
Sbjct: 18  EIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQP 77

Query: 130 CKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPEFKGKATDLSELAF 189
             K  P PP  +    +P           +   S F+           KGKA+DL++LAF
Sbjct: 78  KSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTR--------KGKASDLADLAF 137

Query: 190 EAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTEYDVASFLSYRVNC 249
           EA S+RD+A                                      YDV+SFL+YRV  
Sbjct: 138 EAKSARDYAW-------------------------------------YDVSSFLTYRVLR 197

Query: 250 HGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALY 309
            GEL+ RVR++GF    DEWVNV   VR+RSIP+E SEC RV VGDL+LC++E +D ALY
Sbjct: 198 TGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALY 244

Query: 310 FDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
            D +V+ I+R +HD   C C+F+VRY+ D+ E
Sbjct: 258 CDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 244

[Close]

BLAST of Lsi02G029920 vs. ExPASy Swiss-Prot
Match: Q8RWJ7 (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.7e-35
Identity = 111/289 (38.41%), Postives = 145/289 (50.17%), Query Frame = 0


Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
           FRFILP   ++ EM+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+
Sbjct: 12  FRFILP---EVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQ 71

Query: 121 NRKKELRSSCKKA------RPPPPPPLP-PPPSPPPPTPPPKLLLYHSESNFLTDAPS-S 180
           NR+  LR+   KA         P   LP    S   P   PK          +T APS S
Sbjct: 72  NRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGS 131

Query: 181 EPPEFKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSF 240
             P      +D S L FEA S+RD A                                  
Sbjct: 132 LVPGVMRSGSDNSYLEFEAKSARDGAW--------------------------------- 191

Query: 241 SSTEYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVK 300
               YDV +FL++R    G+ + +VR+AGF  +EDEW+NV + VR RS+P E+SEC  V 
Sbjct: 192 ----YDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVL 251

Query: 301 VGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
            GDLVLC++EG+D ALYFDA V++ QRR HD+ GCRC F+VRY +D  E
Sbjct: 252 AGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSE 260

[Close]

BLAST of Lsi02G029920 vs. ExPASy TrEMBL
Match: A0A5A7UBT5 (Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold481G00190 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 6.8e-119
Identity = 236/345 (68.41%), Postives = 246/345 (71.30%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           ME+  SS++LDDS FEFTLAEASSY                                   
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAEASSY----------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA KSPVTAE VH WFE
Sbjct: 61  ----------IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAAKSPVTAEHVHAWFE 120

Query: 121 NRKKELRSSCKKARPPPPPP----LPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPE 180
           NR+KELRSS KKARPPPPPP    LPP PS PPPTPPPKLLLYHSES+FLT APSSEPPE
Sbjct: 121 NRRKELRSSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHSESDFLTHAPSSEPPE 180

Query: 181 FKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTE 240
           F GKATDLSELAFEAFSSRDHA                                      
Sbjct: 181 FIGKATDLSELAFEAFSSRDHAW------------------------------------- 240

Query: 241 YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 300
           YDVASFL+YR+NCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL
Sbjct: 241 YDVASFLTYRINCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 263

Query: 301 VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           VLC+RE QDHALYFDAYVVEIQRRLHDIGGCRCIFVVRY++DHYE
Sbjct: 301 VLCFRERQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYEHDHYE 263

[Close]

BLAST of Lsi02G029920 vs. ExPASy TrEMBL
Match: A0A1S3CIG7 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500784 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 3.2e-116
Identity = 232/345 (67.25%), Postives = 242/345 (70.14%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           ME+  SS++LDDS FEFTLAE                                       
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAE--------------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA KSPVTAE VH WFE
Sbjct: 61  ----------IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAAKSPVTAEHVHAWFE 120

Query: 121 NRKKELRSSCKKARPPPPPP----LPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPE 180
           NR+KELRSS KKARPPPPPP    LPP PS PPPTPPPKLLLYHSES+FLT APSSEPPE
Sbjct: 121 NRRKELRSSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHSESDFLTHAPSSEPPE 180

Query: 181 FKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTE 240
           F GKATDLSELAFEAFSSRDHA                                      
Sbjct: 181 FIGKATDLSELAFEAFSSRDHAW------------------------------------- 240

Query: 241 YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 300
           YDVASFL+YR+NCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL
Sbjct: 241 YDVASFLTYRINCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 259

Query: 301 VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           VLC+RE QDHALYFDAYVVEIQRRLHDIGGCRCIFVVRY++DHYE
Sbjct: 301 VLCFRERQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYEHDHYE 259

[Close]

BLAST of Lsi02G029920 vs. ExPASy TrEMBL
Match: A0A5D3C067 (Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00280 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 6.8e-111
Identity = 233/375 (62.13%), Postives = 250/375 (66.67%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           ME+  SS++LDDS FEFTLAEASSY                                   
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAEASSY----------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA KSPVTAE VH WFE
Sbjct: 61  ----------IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAAKSPVTAEHVHAWFE 120

Query: 121 NRKKELRSSCKKARPPPPPP----LPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPE 180
           NR+KELRSS KKARPPPPPP    LPP PS PPPTPPPKLLLYHSES+FLT APSSEPPE
Sbjct: 121 NRRKELRSSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHSESDFLTHAPSSEPPE 180

Query: 181 FKGKATDLSELAFEAFSSRDHAC---HSG-------------------CYTLDNDVPKTD 240
           F GKATDLSELAFEAFSSRDHAC   HS                    C +++ D+    
Sbjct: 181 FIGKATDLSELAFEAFSSRDHACRCHHSDVLLGDYCWWWSATAIEYLKCRSINRDMRGGV 240

Query: 241 IQF--------RSFKKALQKLGFGSFSSTEYDVASFLSYRVNCHGELDARVRYAGFGKDE 300
           I           +F+  + KL             S + Y     G+ DARVRYAGFGKDE
Sbjct: 241 IPILCPWNPPKPTFRLQMHKL---------RHCFSTVVYHYETTGKKDARVRYAGFGKDE 300

Query: 301 DEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGG 342
           DEWVNVARGVRDRSIPLESSECYRVKVGDLVLC+RE QDHALYFDAYVVEIQRRLHDIGG
Sbjct: 301 DEWVNVARGVRDRSIPLESSECYRVKVGDLVLCFRERQDHALYFDAYVVEIQRRLHDIGG 321

[Close]

BLAST of Lsi02G029920 vs. ExPASy TrEMBL
Match: A0A6J1DBC4 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Momordica charantia OX=3673 GN=LOC111018742 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.2e-110
Identity = 225/345 (65.22%), Postives = 237/345 (68.70%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           MEYR+  + LDD PFEFTLAE                                       
Sbjct: 1   MEYRSLPKDLDDYPFEFTLAE--------------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKD+GDQTLGQEFFQDVALHFSCSPWRAGKS VTAEQV GWFE
Sbjct: 61  ----------IVEMDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFE 120

Query: 121 NRKKELRSSCKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEP----PE 180
           NR+ ELRSS KKA PPPPPP PPPP      PPPKLLLYHS+S+FLTDAPSSEP    PE
Sbjct: 121 NRQNELRSSSKKAPPPPPPPSPPPP------PPPKLLLYHSDSSFLTDAPSSEPPDSLPE 180

Query: 181 FKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTE 240
            KGKA+DLSELAFEAFSSRD+A                                      
Sbjct: 181 LKGKASDLSELAFEAFSSRDNAW------------------------------------- 240

Query: 241 YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 300
           YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVR+RSIPLESSECYRVKVGDL
Sbjct: 241 YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDL 253

Query: 301 VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYD+D++E
Sbjct: 301 VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE 253

[Close]

BLAST of Lsi02G029920 vs. ExPASy TrEMBL
Match: A0A0A0KCT9 (SAWADEE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G452900 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 3.7e-109
Identity = 222/353 (62.89%), Postives = 236/353 (66.86%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           ME+R SS++LDDS FEFTLAE                                       
Sbjct: 1   MEHRKSSKLLDDSSFEFTLAE--------------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKDS DQTLGQEFFQDVALHFSCSPWRA KSPVT E VH WFE
Sbjct: 61  ----------IVEMDNILKDSRDQTLGQEFFQDVALHFSCSPWRAAKSPVTTEHVHAWFE 120

Query: 121 NRKKELRSSCKKARPPPPPPLPPPPSP------------PPPTPPPKLLLYHSESNFLTD 180
           NR+KELR+S KKARPPPPPP  PPP P            PPP+PPPKLLLYHSES+FLT 
Sbjct: 121 NRRKELRASSKKARPPPPPPSEPPPPPPSELPPLPTPSSPPPSPPPKLLLYHSESDFLTH 180

Query: 181 APSSEPPEFKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLG 240
           APSS PPEFKGKATDLSELAFEAFSSRDHA                              
Sbjct: 181 APSSGPPEFKGKATDLSELAFEAFSSRDHAW----------------------------- 240

Query: 241 FGSFSSTEYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSEC 300
                   YDVASFL+YRVNCHGELDARVRYAGF KDEDEWVNV RGVRDRSIPLESSEC
Sbjct: 241 --------YDVASFLTYRVNCHGELDARVRYAGFRKDEDEWVNVGRGVRDRSIPLESSEC 267

Query: 301 YRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           YRVKVGDLVLC++E QDHALYFDA+VVEIQRRLHDI GCRCIFVVRY++D +E
Sbjct: 301 YRVKVGDLVLCFQERQDHALYFDAHVVEIQRRLHDISGCRCIFVVRYEHDRHE 267

[Close]

BLAST of Lsi02G029920 vs. NCBI nr
Match: XP_038897963.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Benincasa hispida])

HSP 1 Score: 464.5 bits (1194), Expect = 8.2e-127
Identity = 246/341 (72.14%), Postives = 250/341 (73.31%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           M+YRNSS VLDDSPFEFTLAE                                       
Sbjct: 1   MDYRNSSSVLDDSPFEFTLAE--------------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE
Sbjct: 61  ----------IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120

Query: 121 NRKKELRSSCKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPEFKGK 180
           NRK EL +SCKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSES+FLTDAPSSEPPEFKGK
Sbjct: 121 NRKMELLTSCKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESDFLTDAPSSEPPEFKGK 180

Query: 181 ATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTEYDVA 240
           ATDLSELAFEAFSSRDHA                                      YDVA
Sbjct: 181 ATDLSELAFEAFSSRDHAW-------------------------------------YDVA 240

Query: 241 SFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCY 300
           SFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCY
Sbjct: 241 SFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCY 255

Query: 301 REGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           REGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYD+D YE
Sbjct: 301 REGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDDYE 255

[Close]

BLAST of Lsi02G029920 vs. NCBI nr
Match: KAA0051041.1 (protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-118
Identity = 236/345 (68.41%), Postives = 246/345 (71.30%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           ME+  SS++LDDS FEFTLAEASSY                                   
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAEASSY----------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA KSPVTAE VH WFE
Sbjct: 61  ----------IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAAKSPVTAEHVHAWFE 120

Query: 121 NRKKELRSSCKKARPPPPPP----LPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPE 180
           NR+KELRSS KKARPPPPPP    LPP PS PPPTPPPKLLLYHSES+FLT APSSEPPE
Sbjct: 121 NRRKELRSSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHSESDFLTHAPSSEPPE 180

Query: 181 FKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTE 240
           F GKATDLSELAFEAFSSRDHA                                      
Sbjct: 181 FIGKATDLSELAFEAFSSRDHAW------------------------------------- 240

Query: 241 YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 300
           YDVASFL+YR+NCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL
Sbjct: 241 YDVASFLTYRINCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 263

Query: 301 VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           VLC+RE QDHALYFDAYVVEIQRRLHDIGGCRCIFVVRY++DHYE
Sbjct: 301 VLCFRERQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYEHDHYE 263

[Close]

BLAST of Lsi02G029920 vs. NCBI nr
Match: XP_008462435.1 (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 6.5e-116
Identity = 232/345 (67.25%), Postives = 242/345 (70.14%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           ME+  SS++LDDS FEFTLAE                                       
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAE--------------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA KSPVTAE VH WFE
Sbjct: 61  ----------IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAAKSPVTAEHVHAWFE 120

Query: 121 NRKKELRSSCKKARPPPPPP----LPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPE 180
           NR+KELRSS KKARPPPPPP    LPP PS PPPTPPPKLLLYHSES+FLT APSSEPPE
Sbjct: 121 NRRKELRSSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHSESDFLTHAPSSEPPE 180

Query: 181 FKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTE 240
           F GKATDLSELAFEAFSSRDHA                                      
Sbjct: 181 FIGKATDLSELAFEAFSSRDHAW------------------------------------- 240

Query: 241 YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 300
           YDVASFL+YR+NCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL
Sbjct: 241 YDVASFLTYRINCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 259

Query: 301 VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           VLC+RE QDHALYFDAYVVEIQRRLHDIGGCRCIFVVRY++DHYE
Sbjct: 301 VLCFRERQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYEHDHYE 259

[Close]

BLAST of Lsi02G029920 vs. NCBI nr
Match: TYK03836.1 (protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 1.4e-110
Identity = 233/375 (62.13%), Postives = 250/375 (66.67%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           ME+  SS++LDDS FEFTLAEASSY                                   
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAEASSY----------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA KSPVTAE VH WFE
Sbjct: 61  ----------IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAAKSPVTAEHVHAWFE 120

Query: 121 NRKKELRSSCKKARPPPPPP----LPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPE 180
           NR+KELRSS KKARPPPPPP    LPP PS PPPTPPPKLLLYHSES+FLT APSSEPPE
Sbjct: 121 NRRKELRSSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHSESDFLTHAPSSEPPE 180

Query: 181 FKGKATDLSELAFEAFSSRDHAC---HSG-------------------CYTLDNDVPKTD 240
           F GKATDLSELAFEAFSSRDHAC   HS                    C +++ D+    
Sbjct: 181 FIGKATDLSELAFEAFSSRDHACRCHHSDVLLGDYCWWWSATAIEYLKCRSINRDMRGGV 240

Query: 241 IQF--------RSFKKALQKLGFGSFSSTEYDVASFLSYRVNCHGELDARVRYAGFGKDE 300
           I           +F+  + KL             S + Y     G+ DARVRYAGFGKDE
Sbjct: 241 IPILCPWNPPKPTFRLQMHKL---------RHCFSTVVYHYETTGKKDARVRYAGFGKDE 300

Query: 301 DEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGG 342
           DEWVNVARGVRDRSIPLESSECYRVKVGDLVLC+RE QDHALYFDAYVVEIQRRLHDIGG
Sbjct: 301 DEWVNVARGVRDRSIPLESSECYRVKVGDLVLCFRERQDHALYFDAYVVEIQRRLHDIGG 321

[Close]

BLAST of Lsi02G029920 vs. NCBI nr
Match: XP_022150667.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Momordica charantia])

HSP 1 Score: 409.8 bits (1052), Expect = 2.4e-110
Identity = 225/345 (65.22%), Postives = 237/345 (68.70%), Query Frame = 0


Query: 1   MEYRNSSRVLDDSPFEFTLAEASSYVMLESCLSIDASEFSFPVRVMCRNSLQHFLFCNYR 60
           MEYR+  + LDD PFEFTLAE                                       
Sbjct: 1   MEYRSLPKDLDDYPFEFTLAE--------------------------------------- 60

Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
                     IVEMDNILKD+GDQTLGQEFFQDVALHFSCSPWRAGKS VTAEQV GWFE
Sbjct: 61  ----------IVEMDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFE 120

Query: 121 NRKKELRSSCKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEP----PE 180
           NR+ ELRSS KKA PPPPPP PPPP      PPPKLLLYHS+S+FLTDAPSSEP    PE
Sbjct: 121 NRQNELRSSSKKAPPPPPPPSPPPP------PPPKLLLYHSDSSFLTDAPSSEPPDSLPE 180

Query: 181 FKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTE 240
            KGKA+DLSELAFEAFSSRD+A                                      
Sbjct: 181 LKGKASDLSELAFEAFSSRDNAW------------------------------------- 240

Query: 241 YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDL 300
           YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVR+RSIPLESSECYRVKVGDL
Sbjct: 241 YDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDL 253

Query: 301 VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYD+D++E
Sbjct: 301 VLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE 253

[Close]

BLAST of Lsi02G029920 vs. TAIR 10
Match: AT1G15215.2 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 176.8 bits (447), Expect = 3.2e-44
Identity = 109/272 (40.07%), Postives = 149/272 (54.78%), Query Frame = 0


Query: 70  QIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFENRKKELRSS 129
           +IV+M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKS +T +QV  WF+ + K     
Sbjct: 18  EIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQP 77

Query: 130 CKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPEFKGKATDLSELAF 189
             K  P PP  +    +P           +   S F+           KGKA+DL++LAF
Sbjct: 78  KSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTR--------KGKASDLADLAF 137

Query: 190 EAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTEYDVASFLSYRVNC 249
           EA S+RD+A                                      YDV+SFL+YRV  
Sbjct: 138 EAKSARDYAW-------------------------------------YDVSSFLTYRVLR 197

Query: 250 HGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALY 309
            GEL+ RVR++GF    DEWVNV   VR+RSIP+E SEC RV VGDL+LC++E +D ALY
Sbjct: 198 TGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALY 244

Query: 310 FDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
            D +V+ I+R +HD   C C+F+VRY+ D+ E
Sbjct: 258 CDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 244

[Close]

BLAST of Lsi02G029920 vs. TAIR 10
Match: AT1G15215.3 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 176.8 bits (447), Expect = 3.2e-44
Identity = 109/272 (40.07%), Postives = 149/272 (54.78%), Query Frame = 0


Query: 70  QIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFENRKKELRSS 129
           +IV+M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKS +T +QV  WF+ + K     
Sbjct: 18  EIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQP 77

Query: 130 CKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPEFKGKATDLSELAF 189
             K  P PP  +    +P           +   S F+           KGKA+DL++LAF
Sbjct: 78  KSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTR--------KGKASDLADLAF 137

Query: 190 EAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTEYDVASFLSYRVNC 249
           EA S+RD+A                                      YDV+SFL+YRV  
Sbjct: 138 EAKSARDYAW-------------------------------------YDVSSFLTYRVLR 197

Query: 250 HGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALY 309
            GEL+ RVR++GF    DEWVNV   VR+RSIP+E SEC RV VGDL+LC++E +D ALY
Sbjct: 198 TGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALY 244

Query: 310 FDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
            D +V+ I+R +HD   C C+F+VRY+ D+ E
Sbjct: 258 CDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 244

[Close]

BLAST of Lsi02G029920 vs. TAIR 10
Match: AT1G15215.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 172.2 bits (435), Expect = 7.8e-43
Identity = 107/268 (39.93%), Postives = 145/268 (54.10%), Query Frame = 0


Query: 74  MDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFENRKKELRSSCKKA 133
           M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKS +T +QV  WF+ + K       K 
Sbjct: 1   MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 60

Query: 134 RPPPPPPLPPPPSPPPPTPPPKLLLYHSESNFLTDAPSSEPPEFKGKATDLSELAFEAFS 193
            P PP  +    +P           +   S F+           KGKA+DL++LAFEA S
Sbjct: 61  LPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTR--------KGKASDLADLAFEAKS 120

Query: 194 SRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFSSTEYDVASFLSYRVNCHGEL 253
           +RD+A                                      YDV+SFL+YRV   GEL
Sbjct: 121 ARDYAW-------------------------------------YDVSSFLTYRVLRTGEL 180

Query: 254 DARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAY 313
           + RVR++GF    DEWVNV   VR+RSIP+E SEC RV VGDL+LC++E +D ALY D +
Sbjct: 181 EVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGH 223

Query: 314 VVEIQRRLHDIGGCRCIFVVRYDYDHYE 342
           V+ I+R +HD   C C+F+VRY+ D+ E
Sbjct: 241 VLNIKRGIHDHARCNCVFLVRYELDNTE 223

[Close]

BLAST of Lsi02G029920 vs. TAIR 10
Match: AT3G18380.2 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-36
Identity = 113/296 (38.18%), Postives = 148/296 (50.00%), Query Frame = 0


Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
           FRFILP   ++ EM+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+
Sbjct: 12  FRFILP---EVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQ 71

Query: 121 NRKKELRSSCKKA------RPPPPPPLP-PPPSPPPPTPPPKLLLYHSESNFLTDAPS-S 180
           NR+  LR+   KA         P   LP    S   P   PK          +T APS S
Sbjct: 72  NRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGS 131

Query: 181 EPPEFKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSF 240
             P      +D S L FEA S+RD A                                  
Sbjct: 132 LVPGVMRSGSDNSYLEFEAKSARDGAW--------------------------------- 191

Query: 241 SSTEYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVK 300
               YDV +FL++R    G+ + +VR+AGF  +EDEW+NV + VR RS+P E+SEC  V 
Sbjct: 192 ----YDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVL 251

Query: 301 VGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYEAFGIQLR 349
            GDLVLC++EG+D ALYFDA V++ QRR HD+ GCRC F+VRY +D  E   + LR
Sbjct: 252 AGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEQEIVPLR 267

[Close]

BLAST of Lsi02G029920 vs. TAIR 10
Match: AT3G18380.3 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-36
Identity = 111/295 (37.63%), Postives = 146/295 (49.49%), Query Frame = 0


Query: 61  FRFILPLILQIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVHGWFE 120
           FRFILP   ++ EM+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+
Sbjct: 12  FRFILP---EVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQ 71

Query: 121 NRKKELRSSCKKA------RPPPPPPLP-PPPSPPPPTPPPKLLLYHSESNFLTDAPSSE 180
           NR+  LR+   KA         P   LP    S   P   PK    H   N     P+  
Sbjct: 72  NRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTT--HMTGNLPGMTPAPS 131

Query: 181 PPEFKGKATDLSELAFEAFSSRDHACHSGCYTLDNDVPKTDIQFRSFKKALQKLGFGSFS 240
            P      +D S L FEA S+RD A                                   
Sbjct: 132 VPGVMRSGSDNSYLEFEAKSARDGAW---------------------------------- 191

Query: 241 STEYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKV 300
              YDV +FL++R    G+ + +VR+AGF  +EDEW+NV + VR RS+P E+SEC  V  
Sbjct: 192 ---YDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVLA 251

Query: 301 GDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDYDHYEAFGIQLR 349
           GDLVLC++EG+D ALYFDA V++ QRR HD+ GCRC F+VRY +D  E   + LR
Sbjct: 252 GDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEQEIVPLR 264

The following BLAST results are available for this feature:

BLAST of Lsi02G029920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI47	4.5e-43	40.07	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE...	[more]
Q8RWJ7	7.7e-35	38.41	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE...	[more]

BLAST of Lsi02G029920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBT5	6.8e-119	68.41	Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 OS=Cucumis melo var. ...	[more]
A0A1S3CIG7	3.2e-116	67.25	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3C067	6.8e-111	62.13	Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 OS=Cucumis melo var. ...	[more]
A0A6J1DBC4	1.2e-110	65.22	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0KCT9	3.7e-109	62.89	SAWADEE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G452900 PE=...	[more]

BLAST of Lsi02G029920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897963.1	8.2e-127	72.14	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Benincasa hispida]	[more]
KAA0051041.1	1.4e-118	68.41	protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 [Cucumis melo var. ma...	[more]
XP_008462435.1	6.5e-116	67.25	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo]	[more]
TYK03836.1	1.4e-110	62.13	protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 [Cucumis melo var. ma...	[more]
XP_022150667.1	2.4e-110	65.22	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Momordica charantia]	[more]

BLAST of Lsi02G029920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15215.2	3.2e-44	40.07	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.3	3.2e-44	40.07	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.1	7.8e-43	39.93	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT3G18380.2	2.4e-36	38.18	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT3G18380.3	2.4e-36	37.63	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.30.30.140		coord: 283..350 e-value: 2.3E-27 score: 96.5
None	No IPR available	GENE3D	2.40.50.40		coord: 226..282 e-value: 1.5E-20 score: 75.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..157
None	No IPR available	PANTHER	PTHR33827:SF12	SUBFAMILY NOT NAMED	coord: 223..341
None	No IPR available	PANTHER	PTHR33827:SF12	SUBFAMILY NOT NAMED	coord: 70..200
IPR032001	SAWADEE domain	PFAM	PF16719	SAWADEE	coord: 237..338 e-value: 7.8E-28 score: 97.2
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 223..341
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 70..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G029920.1	Lsi02G029920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003682	chromatin binding