Lsi02G029420 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G029420
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CA-responsive protein
Location	chr02: 35574023 .. 35577072 (-)
RNA-Seq Expression	Lsi02G029420
Synteny	Lsi02G029420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCGTTTTCGCCTTGAAACTGAAAGGGGGATATTTATTTTGTTTCAAAGATTCTTCTTCACACCCATTTTACTTAAGACCCAACTGAATTTATCCTCTTTCAGCTTCAAATCCGAACCTACCCCGATTCAATCGTCTCCTTTCCACTCTCTCTCTGCTGGGTTTTCCTTTTTTTGCTCTTTTTTTCTTCAATTTTTTTCTCTGTTCATGCCCTCCAATGGCGGCTTTACACTCGTATTTGTCCCGTTTCTTCCCCAATTTCCCATTTCTAATTACTAACTACTCTGAAGGAGACATACCCATGTTATTATGCTCCTTCTTCGTCTTCTTTACCTTCTCCGTCCTCGTTTTATCGCTCTCTCTTTACAAAAAGGTGAAAAAAATCCAGTTTGAACAGCATCAGCAACTAATCAGTAAGCCGATTGAGCCTGAGAGAATTGATTTTGGGAATTCTGTGGCGGATTGTGACAATGGAACTGACAGGACTTGTTTAACTCACTCGCTTCTCTTCGAGATCCTACCGCCGGATTCTCCAAAATGGGCTAGTTTCTTTGTCGAAGAGGGCCGTGGTGACCTAGATTTGAAGGGTGCTGGATTGAACAAGGAATTTGGAGATTCTGGTCAGGAGCAAGGGGGAAAGAGGAAGAAGAAGAGAGCAAAGAAGAAGAGGGCGAATTTGCAAGGTGGAGATGAGAATGAAAATTGGGGAACGGATGTTGGAACGGGTTCTGAGCAGGAATTGACTCTGTTATATCCATTTACATCGTCTACTAGTGTGATTCAGAGGAAGATTAAACGGCAGTATGATGAACTAATGAAGTGTCAGGAATCAAAGGAATTGACATTGGCTCAGGTTTTGTATTCTTTTTTATATCTCATGAATCGTATTTTCTTCTTTTAGTAGTAATCTTTCTTCACAGTGCTTGTTGAATGTCCTGCAACCTCCATTTTTGTTTTTGTCTGTATTTCAATTAGAGTTTCTGCAGCAGTTCATTACTCTGCCATTAGCATCTTATTGCCCTATCTTCTGGTGCAACCCTTTGCTAGATACATATAAAATATAATTTAATCCACTTTATTTCTCTTCCTTGACATAATTTTAGCTTGAAGCTCCTTTGATATGTCTGTTCTTATATATTTGAGATAGATTGTGAGGGTAAGTAATGTATTACAAGATTGCCTGGGAACAGACATACAGTAATATTGCTAATATTTCCTGGACTTCATTGAATAACAACTCTATCTAGAATGATTGTAGTTGATCGAGTTTCCATTAGAGATCATCTTAAACGATACGATATGATGTTTTGGTTGGACTGTGGTCTGTGAGAACTCTTGCTTTTAGCCGATGACTATGGAGTTTTTAGCAGCTCAAGCCCAAAAGTTGGACCCAACCCTGTATCCACAACTTTTCCGATTTCGATGGCTTTGTGTCGCTAGTGTGTTAGAATTGAGACTGATAGGGGGTAGAGTTCTAAATACTGAAGCACTGCAATTTATTTCTGTTTTACTTTCAAACGCAGGTCCGACAGTTCGCCAACTGCTTAATCAACGCTAGAAGCAAGCTGCAGCACAAGTATGCTTCATTTCTTTGCTTCAACTATATTAGTGTTTCTCTCTCGACTCTTAGTGTGTCAAATTTGATATTTTTCTTTTTGGAGTTCATTTATATCTCTTTCAACTTTTTGTTAAGTATGATTACCGGAGGTTAGGTTAGGGTCAGGCGGGTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGTCCGGACACTCACGGATAAAAAAAAAAAAAAAAAAAGATTACCGTAGGTTAGGTTACATTTGCTTGTGAGAACTATCTCTAAGATTTTTTTGCCCTTCTTAAGTTAATGCACTCCCAACTATATACACCTTTTCTACTGACAGAGCTGATGTTATCCACCGAAAGTTCACCATAACGAAAGCTCTGCTTTACAAGGCAGATAGATCCTCCTTCGATCGCCTTCAACAGCAGGTTAGTGACATGATATAACTTGATTTTTGGTTTCATGTAAAATTTGTTGATCTGTTGTTGCCTTGCCCTAGATATACAAGTTAGAATTGGAACAGAAAAGACTAGAGGAGGACACCTTTGTTTATAACTGGCTTCAACAACAGCTTAAACTCTCTCCAGCATACAAAAAGGTATTACTTTTACCTCTAGGCTCTTATTTCGTTTACACCTTTTTTTGCTGCCAATGCTTCCTAGAAATCGGGAACTGCTGGTCTGTTGTAGCCTCAGAATCCCATCCCCCATTTATAGTTAGTGCCCTTTGTAAGTTCACTTGATCAGGTTCACTACTCTGTTATCCTTTTCCCATAATAGTTGAAAATGTCCAATGAAGTTATAAGATGGATATCTTCTTCCCTTCTTTTTGCTTTCTCTCTCTCTCTCTCTGTTACATACACACTTGAAATTGTTATTGAGAATAATGCAACAGCCAGAGTTGATGATTTCGCTAAACCTTATGATCTTCCAGATGCTAGAAATTGGTACCTGCATGGAGTTGATGGAAAAATCTGAGAAGCCAACGGAAAAGATCGATTCTGAGTTTACCGACATATCATTTGAAGAACTATTAGCACAGGAAAAAAAGGATTCGTTTTGGTAAGACATCATCATCTCTGGTAGTTTATTGTTTGTAATAGATGTGTGAGGCCTTAGTAACAGTGGTATCTTTTCAAATATTCATGCAGGCAGAGGAATGGGAAACTGAGATCATGCTCAAGCTGATACAGGTGATGAGTTTCCTCTTGTTTTCTTGTAACAAAAGATCAGATTTGCAGCATGTAAATCCAAAAATAAAACACTTTGTACCTAGCAGGAATTTTGTTAGCAGCCTGCTGCTTCTTGATTTTGCTCAAGTAAATATACCTCTTTTCTCTCTATTAGTTAGGATTTTTAGGGAAGTTGGTCAATCACATTAGGGATTTTTTTTTTTTTTTAGTACCATCAGATGCCTGTAGTTTGTAGTCAATCACTGACTGAATATTGACTTTGTCAATGATAAAATTTCAAAATATTTCTAC

mRNA sequence

CCGCGTTTTCGCCTTGAAACTGAAAGGGGGATATTTATTTTGTTTCAAAGATTCTTCTTCACACCCATTTTACTTAAGACCCAACTGAATTTATCCTCTTTCAGCTTCAAATCCGAACCTACCCCGATTCAATCGTCTCCTTTCCACTCTCTCTCTGCTGGGTTTTCCTTTTTTTGCTCTTTTTTTCTTCAATTTTTTTCTCTGTTCATGCCCTCCAATGGCGGCTTTACACTCGTATTTGTCCCGTTTCTTCCCCAATTTCCCATTTCTAATTACTAACTACTCTGAAGGAGACATACCCATGTTATTATGCTCCTTCTTCGTCTTCTTTACCTTCTCCGTCCTCGTTTTATCGCTCTCTCTTTACAAAAAGGTGAAAAAAATCCAGTTTGAACAGCATCAGCAACTAATCAGTAAGCCGATTGAGCCTGAGAGAATTGATTTTGGGAATTCTGTGGCGGATTGTGACAATGGAACTGACAGGACTTGTTTAACTCACTCGCTTCTCTTCGAGATCCTACCGCCGGATTCTCCAAAATGGGCTAGTTTCTTTGTCGAAGAGGGCCGTGGTGACCTAGATTTGAAGGGTGCTGGATTGAACAAGGAATTTGGAGATTCTGGTCAGGAGCAAGGGGGAAAGAGGAAGAAGAAGAGAGCAAAGAAGAAGAGGGCGAATTTGCAAGGTGGAGATGAGAATGAAAATTGGGGAACGGATGTTGGAACGGGTTCTGAGCAGGAATTGACTCTGTTATATCCATTTACATCGTCTACTAGTGTGATTCAGAGGAAGATTAAACGGCAGTATGATGAACTAATGAAGTGTCAGGAATCAAAGGAATTGACATTGGCTCAGGTCCGACAGTTCGCCAACTGCTTAATCAACGCTAGAAGCAAGCTGCAGCACAAAGCTGATGTTATCCACCGAAAGTTCACCATAACGAAAGCTCTGCTTTACAAGGCAGATAGATCCTCCTTCGATCGCCTTCAACAGCAGATGCTAGAAATTGGTACCTGCATGGAGTTGATGGAAAAATCTGAGAAGCCAACGGAAAAGATCGATTCTGAGTTTACCGACATATCATTTGAAGAACTATTAGCACAGGAAAAAAAGGATTCGTTTTGGCAGAGGAATGGGAAACTGAGATCATGCTCAAGCTGATACAGGTGATGAGTTTCCTCTTGTTTTCTTGTAACAAAAGATCAGATTTGCAGCATGTAAATCCAAAAATAAAACACTTTGTACCTAGCAGGAATTTTGTTAGCAGCCTGCTGCTTCTTGATTTTGCTCAAGTAAATATACCTCTTTTCTCTCTATTAGTTAGGATTTTTAGGGAAGTTGGTCAATCACATTAGGGATTTTTTTTTTTTTTTAGTACCATCAGATGCCTGTAGTTTGTAGTCAATCACTGACTGAATATTGACTTTGTCAATGATAAAATTTCAAAATATTTCTAC

Coding sequence (CDS)

ATGGCGGCTTTACACTCGTATTTGTCCCGTTTCTTCCCCAATTTCCCATTTCTAATTACTAACTACTCTGAAGGAGACATACCCATGTTATTATGCTCCTTCTTCGTCTTCTTTACCTTCTCCGTCCTCGTTTTATCGCTCTCTCTTTACAAAAAGGTGAAAAAAATCCAGTTTGAACAGCATCAGCAACTAATCAGTAAGCCGATTGAGCCTGAGAGAATTGATTTTGGGAATTCTGTGGCGGATTGTGACAATGGAACTGACAGGACTTGTTTAACTCACTCGCTTCTCTTCGAGATCCTACCGCCGGATTCTCCAAAATGGGCTAGTTTCTTTGTCGAAGAGGGCCGTGGTGACCTAGATTTGAAGGGTGCTGGATTGAACAAGGAATTTGGAGATTCTGGTCAGGAGCAAGGGGGAAAGAGGAAGAAGAAGAGAGCAAAGAAGAAGAGGGCGAATTTGCAAGGTGGAGATGAGAATGAAAATTGGGGAACGGATGTTGGAACGGGTTCTGAGCAGGAATTGACTCTGTTATATCCATTTACATCGTCTACTAGTGTGATTCAGAGGAAGATTAAACGGCAGTATGATGAACTAATGAAGTGTCAGGAATCAAAGGAATTGACATTGGCTCAGGTCCGACAGTTCGCCAACTGCTTAATCAACGCTAGAAGCAAGCTGCAGCACAAAGCTGATGTTATCCACCGAAAGTTCACCATAACGAAAGCTCTGCTTTACAAGGCAGATAGATCCTCCTTCGATCGCCTTCAACAGCAGATGCTAGAAATTGGTACCTGCATGGAGTTGATGGAAAAATCTGAGAAGCCAACGGAAAAGATCGATTCTGAGTTTACCGACATATCATTTGAAGAACTATTAGCACAGGAAAAAAAGGATTCGTTTTGGCAGAGGAATGGGAAACTGAGATCATGCTCAAGCTGA

Protein sequence

MAALHSYLSRFFPNFPFLITNYSEGDIPMLLCSFFVFFTFSVLVLSLSLYKKVKKIQFEQHQQLISKPIEPERIDFGNSVADCDNGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGDLDLKGAGLNKEFGDSGQEQGGKRKKKRAKKKRANLQGGDENENWGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQMLEIGTCMELMEKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQRNGKLRSCSS

Homology

[Close]

BLAST of Lsi02G029420 vs. ExPASy TrEMBL
Match: A0A0A0KCQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451370 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 8.3e-150
Identity = 288/347 (83.00%), Postives = 294/347 (84.73%), Query Frame = 0


Query: 1   MAALHSYLSRFFPNFPFLITNYSEGDIPM-LLCSFFVFFTFSVLVLSLSLYKKVKKIQFE 60
           MAALHSYLSRFFPNFPF ITN SEGDIPM LLCSFF+FFTF VLVLS  LYK+VKKI+F 
Sbjct: 1   MAALHSYLSRFFPNFPFRITNLSEGDIPMLLLCSFFLFFTFFVLVLSFFLYKRVKKIEFG 60

Query: 61  QHQQLISKPIEPERIDFGNSVADCDNGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGD 120
           QHQQLIS PIEPE+ID GNSVADC NGTDRTCLTHSLLFEILPPDSPKWASFFVE    D
Sbjct: 61  QHQQLISNPIEPEKIDIGNSVADCGNGTDRTCLTHSLLFEILPPDSPKWASFFVEGRCDD 120

Query: 121 LDLKGAGLNKEFGDSGQEQGGKRKKKRAKKKRANLQGGDENENWGTDVGTGSEQELTLLY 180
           LDLK  GLNKEFGDSGQEQGGKRKKK+AKKKRANLQ GDENE WGTDVGTGSEQELTLLY
Sbjct: 121 LDLKSDGLNKEFGDSGQEQGGKRKKKKAKKKRANLQDGDENEKWGTDVGTGSEQELTLLY 180

Query: 181 PFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFT 240
           PFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFT
Sbjct: 181 PFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFT 240

Query: 241 ITKALLYKADRSSFDRLQQQ---------------------------------MLEIGTC 300
           ITKALLYKADRSSFDRLQQQ                                 MLEIGTC
Sbjct: 241 ITKALLYKADRSSFDRLQQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAYKKMLEIGTC 300

Query: 301 MELMEKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQRNGKLRSCSS 314
           MELM KSEKPTE IDSEFTD+SFEELLAQEKKDSFWQRNGKLRSCSS
Sbjct: 301 MELMAKSEKPTENIDSEFTDMSFEELLAQEKKDSFWQRNGKLRSCSS 347

[Close]

BLAST of Lsi02G029420 vs. ExPASy TrEMBL
Match: A0A1S3CHA9 (uncharacterized protein LOC103500732 OS=Cucumis melo OX=3656 GN=LOC103500732 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 282/346 (81.50%), Postives = 293/346 (84.68%), Query Frame = 0


Query: 1   MAALHSYLSRFFPNFPFLITNYSEGDIPMLLCSFFVFFTFSVLVLSLSLYKKVKKIQFEQ 60
           MAALHSYLSRFFP+FPF ITN+SEGDIPMLL   F+FFTF +LVLS SLYK+VKK++FE+
Sbjct: 1   MAALHSYLSRFFPSFPFRITNFSEGDIPMLLLCSFLFFTFFILVLSFSLYKRVKKVEFEE 60

Query: 61  HQQLISKPIEPERIDFGNSVADCDNGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGDL 120
           HQQLIS PIEPE+ID GNSV DC NGTDRTCLTHSLLFEILPPDSPKWASFFVE    DL
Sbjct: 61  HQQLISNPIEPEKIDIGNSVTDCGNGTDRTCLTHSLLFEILPPDSPKWASFFVEGRCDDL 120

Query: 121 DLKGAGLNKEFGDSGQEQGGKRKKKRAKKKRANLQGGDENENWGTDVGTGSEQELTLLYP 180
           DLKGA LNKEFGDSGQEQGGKRKKK+AKKKRANLQ GDEN  WGTDVGTGSEQELTLLYP
Sbjct: 121 DLKGARLNKEFGDSGQEQGGKRKKKKAKKKRANLQDGDENVKWGTDVGTGSEQELTLLYP 180

Query: 181 FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI 240
           FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI
Sbjct: 181 FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI 240

Query: 241 TKALLYKADRSSFDRLQQQ---------------------------------MLEIGTCM 300
           TKALLYKADRSSFDRLQQQ                                 MLEIGTCM
Sbjct: 241 TKALLYKADRSSFDRLQQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAYKKMLEIGTCM 300

Query: 301 ELMEKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQRNGKLRSCSS 314
           ELM KSEKPTE IDSEFTD+SFEELLAQEKKDSFWQRNGKLRSCSS
Sbjct: 301 ELMAKSEKPTENIDSEFTDMSFEELLAQEKKDSFWQRNGKLRSCSS 346

[Close]

BLAST of Lsi02G029420 vs. ExPASy TrEMBL
Match: A0A6J1D702 (uncharacterized protein LOC111017622 OS=Momordica charantia OX=3673 GN=LOC111017622 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 6.0e-140
Identity = 270/350 (77.14%), Postives = 286/350 (81.71%), Query Frame = 0


Query: 1   MAALHSYLSRFFPNFPFLITNYSEGDIPM-LLCSFFVFFTFSVLVLSLSLYKKVKKIQFE 60
           MA L SYLSRFFPNFP  I+NYS+GD+PM LLCSFFVFFTFSVLVLS SLYK+++KI+FE
Sbjct: 1   MAPLRSYLSRFFPNFPLRISNYSDGDLPMLLLCSFFVFFTFSVLVLSFSLYKRLRKIEFE 60

Query: 61  QHQQLISKPIEPERIDFGNSVADCDNGTDR---TCLTHSLLFEILPPDSPKWASFFVEEG 120
            HQQLISKP EPERID G+S+A C  GTDR    CLTHSLLFEILPPDSPKW S F EEG
Sbjct: 61  HHQQLISKPSEPERIDIGHSLASCGEGTDRRSPACLTHSLLFEILPPDSPKWGSLFDEEG 120

Query: 121 RGDLDLKGAGLNKEFGDSGQEQGGKRKKKRAKKKRANLQGGDENENWGTDVGTGSEQELT 180
           R DLD KG+GLN+EFGDSGQEQGGKRKKKRAKKKRAN Q  DE +NWG D GTGSEQELT
Sbjct: 121 RDDLDSKGSGLNREFGDSGQEQGGKRKKKRAKKKRANSQAEDETDNWGVDSGTGSEQELT 180

Query: 181 LLYPFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHR 240
           LLYPFTSSTSVIQRKIK+QYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHR
Sbjct: 181 LLYPFTSSTSVIQRKIKQQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHR 240

Query: 241 KFTITKALLYKADRSSFDRLQQQ---------------------------------MLEI 300
           KFTITKALLYKADRSSFDRLQQQ                                 MLEI
Sbjct: 241 KFTITKALLYKADRSSFDRLQQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAYKKMLEI 300

Query: 301 GTCMELMEKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQRNGKLRSCSS 314
           G CME++EKSEKPTE  DSEFTD+SFEELLAQEKKDSFW RNGKLRSCSS
Sbjct: 301 GNCMEIIEKSEKPTENPDSEFTDMSFEELLAQEKKDSFWHRNGKLRSCSS 350

[Close]

BLAST of Lsi02G029420 vs. ExPASy TrEMBL
Match: E5GCA7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 4.2e-133
Identity = 258/318 (81.13%), Postives = 268/318 (84.28%), Query Frame = 0


Query: 29  MLLCSFFVFFTFSVLVLSLSLYKKVKKIQFEQHQQLISKPIEPERIDFGNSVADCDNGTD 88
           +LLCS F+FFTF +LVLS SLYK+VKK++FE+HQQLIS PIEPE+ID GNSV DC NGTD
Sbjct: 2   LLLCS-FLFFTFFILVLSFSLYKRVKKVEFEEHQQLISNPIEPEKIDIGNSVTDCGNGTD 61

Query: 89  RTCLTHSLLFEILPPDSPKWASFFVEEGRGDLDLKGAGLNKEFGDSGQEQGGKRKKKRAK 148
           RTCLTHSLLFEILPPDSPKWASFFVE    DLDLKGA LNKEFGDSGQEQGGKRKKK+AK
Sbjct: 62  RTCLTHSLLFEILPPDSPKWASFFVEGRCDDLDLKGARLNKEFGDSGQEQGGKRKKKKAK 121

Query: 149 KKRANLQGGDENENWGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL 208
           KKRANLQ GDEN  WGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL
Sbjct: 122 KKRANLQDGDENVKWGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL 181

Query: 209 TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQ--------- 268
           TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQ         
Sbjct: 182 TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQIYKLELEQK 241

Query: 269 ------------------------MLEIGTCMELMEKSEKPTEKIDSEFTDISFEELLAQ 314
                                   MLEIGTCMELM KSEKPTE IDSEFTD+SFEELLAQ
Sbjct: 242 RLEEDTFVYNWLQQQLKLSPAYKKMLEIGTCMELMAKSEKPTENIDSEFTDMSFEELLAQ 301

[Close]

BLAST of Lsi02G029420 vs. ExPASy TrEMBL
Match: A0A5A7V0S5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00850 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 7.1e-133
Identity = 258/318 (81.13%), Postives = 268/318 (84.28%), Query Frame = 0


Query: 29  MLLCSFFVFFTFSVLVLSLSLYKKVKKIQFEQHQQLISKPIEPERIDFGNSVADCDNGTD 88
           +LLCS F+FFTF +LVLS SLYK+VKK++FE+HQQLIS PIEPE+I  GNSV DC NGTD
Sbjct: 2   LLLCS-FLFFTFFILVLSFSLYKRVKKVEFEEHQQLISNPIEPEKIYIGNSVTDCGNGTD 61

Query: 89  RTCLTHSLLFEILPPDSPKWASFFVEEGRGDLDLKGAGLNKEFGDSGQEQGGKRKKKRAK 148
           RTCLTHSLLFEILPPDSPKWASFFVE    DLDLKGA LNKEFGDSGQEQGGKRKKK+AK
Sbjct: 62  RTCLTHSLLFEILPPDSPKWASFFVEGRCDDLDLKGARLNKEFGDSGQEQGGKRKKKKAK 121

Query: 149 KKRANLQGGDENENWGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL 208
           KKRANLQ GDENE WGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL
Sbjct: 122 KKRANLQDGDENEKWGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL 181

Query: 209 TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQ--------- 268
           TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQ         
Sbjct: 182 TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQIYKLELEQK 241

Query: 269 ------------------------MLEIGTCMELMEKSEKPTEKIDSEFTDISFEELLAQ 314
                                   MLEIGTCMELM KSEKPTE IDSEFTD+SFEELLAQ
Sbjct: 242 RLEEDTFVYNWLQQQLKLSPAYKKMLEIGTCMELMAKSEKPTENIDSEFTDMSFEELLAQ 301

[Close]

BLAST of Lsi02G029420 vs. NCBI nr
Match: XP_038896162.1 (uncharacterized protein LOC120084452 [Benincasa hispida])

HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-155
Identity = 293/346 (84.68%), Postives = 302/346 (87.28%), Query Frame = 0


Query: 1   MAALHSYLSRFFPNFPFLITNYSEGDIPMLLCSFFVFFTFSVLVLSLSLYKKVKKIQFEQ 60
           MAALHSYLSRFFPNFPF ITN+SEGDIPMLL  FFVFFTFSVLVLS S+YK+VKKI+FEQ
Sbjct: 1   MAALHSYLSRFFPNFPFRITNFSEGDIPMLLLCFFVFFTFSVLVLSFSIYKRVKKIEFEQ 60

Query: 61  HQQLISKPIEPERIDFGNSVADCDNGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGDL 120
            QQLIS+PIEPERID GNSVADC NGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGDL
Sbjct: 61  QQQLISEPIEPERIDIGNSVADCGNGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGDL 120

Query: 121 DLKGAGLNKEFGDSGQEQGGKRKKKRAKKKRANLQGGDENENWGTDVGTGSEQELTLLYP 180
           DLK  GLNKEFGDSGQEQGGKRKKKRAKKKRAN Q GDE+ENWGTDVGTGSEQELTLLYP
Sbjct: 121 DLKSVGLNKEFGDSGQEQGGKRKKKRAKKKRANSQAGDESENWGTDVGTGSEQELTLLYP 180

Query: 181 FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI 240
           FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI
Sbjct: 181 FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI 240

Query: 241 TKALLYKADRSSFDRLQQQ---------------------------------MLEIGTCM 300
           TKALLYKADRSSFDRLQQQ                                 MLEIGTCM
Sbjct: 241 TKALLYKADRSSFDRLQQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAYKKMLEIGTCM 300

Query: 301 ELMEKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQRNGKLRSCSS 314
           EL++KSEKPTEKIDSEFTDISFEELLAQEKKDSFWQ+NGKLRSCSS
Sbjct: 301 ELIQKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQKNGKLRSCSS 346

[Close]

BLAST of Lsi02G029420 vs. NCBI nr
Match: XP_004141679.1 (uncharacterized protein LOC101218544 [Cucumis sativus] >KGN45531.1 hypothetical protein Csa_016896 [Cucumis sativus])

HSP 1 Score: 539.7 bits (1389), Expect = 1.7e-149
Identity = 288/347 (83.00%), Postives = 294/347 (84.73%), Query Frame = 0


Query: 1   MAALHSYLSRFFPNFPFLITNYSEGDIPM-LLCSFFVFFTFSVLVLSLSLYKKVKKIQFE 60
           MAALHSYLSRFFPNFPF ITN SEGDIPM LLCSFF+FFTF VLVLS  LYK+VKKI+F 
Sbjct: 1   MAALHSYLSRFFPNFPFRITNLSEGDIPMLLLCSFFLFFTFFVLVLSFFLYKRVKKIEFG 60

Query: 61  QHQQLISKPIEPERIDFGNSVADCDNGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGD 120
           QHQQLIS PIEPE+ID GNSVADC NGTDRTCLTHSLLFEILPPDSPKWASFFVE    D
Sbjct: 61  QHQQLISNPIEPEKIDIGNSVADCGNGTDRTCLTHSLLFEILPPDSPKWASFFVEGRCDD 120

Query: 121 LDLKGAGLNKEFGDSGQEQGGKRKKKRAKKKRANLQGGDENENWGTDVGTGSEQELTLLY 180
           LDLK  GLNKEFGDSGQEQGGKRKKK+AKKKRANLQ GDENE WGTDVGTGSEQELTLLY
Sbjct: 121 LDLKSDGLNKEFGDSGQEQGGKRKKKKAKKKRANLQDGDENEKWGTDVGTGSEQELTLLY 180

Query: 181 PFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFT 240
           PFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFT
Sbjct: 181 PFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFT 240

Query: 241 ITKALLYKADRSSFDRLQQQ---------------------------------MLEIGTC 300
           ITKALLYKADRSSFDRLQQQ                                 MLEIGTC
Sbjct: 241 ITKALLYKADRSSFDRLQQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAYKKMLEIGTC 300

Query: 301 MELMEKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQRNGKLRSCSS 314
           MELM KSEKPTE IDSEFTD+SFEELLAQEKKDSFWQRNGKLRSCSS
Sbjct: 301 MELMAKSEKPTENIDSEFTDMSFEELLAQEKKDSFWQRNGKLRSCSS 347

[Close]

BLAST of Lsi02G029420 vs. NCBI nr
Match: XP_008462357.1 (PREDICTED: uncharacterized protein LOC103500732 [Cucumis melo])

HSP 1 Score: 535.4 bits (1378), Expect = 3.2e-148
Identity = 282/346 (81.50%), Postives = 293/346 (84.68%), Query Frame = 0


Query: 1   MAALHSYLSRFFPNFPFLITNYSEGDIPMLLCSFFVFFTFSVLVLSLSLYKKVKKIQFEQ 60
           MAALHSYLSRFFP+FPF ITN+SEGDIPMLL   F+FFTF +LVLS SLYK+VKK++FE+
Sbjct: 1   MAALHSYLSRFFPSFPFRITNFSEGDIPMLLLCSFLFFTFFILVLSFSLYKRVKKVEFEE 60

Query: 61  HQQLISKPIEPERIDFGNSVADCDNGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGDL 120
           HQQLIS PIEPE+ID GNSV DC NGTDRTCLTHSLLFEILPPDSPKWASFFVE    DL
Sbjct: 61  HQQLISNPIEPEKIDIGNSVTDCGNGTDRTCLTHSLLFEILPPDSPKWASFFVEGRCDDL 120

Query: 121 DLKGAGLNKEFGDSGQEQGGKRKKKRAKKKRANLQGGDENENWGTDVGTGSEQELTLLYP 180
           DLKGA LNKEFGDSGQEQGGKRKKK+AKKKRANLQ GDEN  WGTDVGTGSEQELTLLYP
Sbjct: 121 DLKGARLNKEFGDSGQEQGGKRKKKKAKKKRANLQDGDENVKWGTDVGTGSEQELTLLYP 180

Query: 181 FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI 240
           FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI
Sbjct: 181 FTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHRKFTI 240

Query: 241 TKALLYKADRSSFDRLQQQ---------------------------------MLEIGTCM 300
           TKALLYKADRSSFDRLQQQ                                 MLEIGTCM
Sbjct: 241 TKALLYKADRSSFDRLQQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAYKKMLEIGTCM 300

Query: 301 ELMEKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQRNGKLRSCSS 314
           ELM KSEKPTE IDSEFTD+SFEELLAQEKKDSFWQRNGKLRSCSS
Sbjct: 301 ELMAKSEKPTENIDSEFTDMSFEELLAQEKKDSFWQRNGKLRSCSS 346

[Close]

BLAST of Lsi02G029420 vs. NCBI nr
Match: XP_022149132.1 (uncharacterized protein LOC111017622 [Momordica charantia])

HSP 1 Score: 506.9 bits (1304), Expect = 1.2e-139
Identity = 270/350 (77.14%), Postives = 286/350 (81.71%), Query Frame = 0


Query: 1   MAALHSYLSRFFPNFPFLITNYSEGDIPM-LLCSFFVFFTFSVLVLSLSLYKKVKKIQFE 60
           MA L SYLSRFFPNFP  I+NYS+GD+PM LLCSFFVFFTFSVLVLS SLYK+++KI+FE
Sbjct: 1   MAPLRSYLSRFFPNFPLRISNYSDGDLPMLLLCSFFVFFTFSVLVLSFSLYKRLRKIEFE 60

Query: 61  QHQQLISKPIEPERIDFGNSVADCDNGTDR---TCLTHSLLFEILPPDSPKWASFFVEEG 120
            HQQLISKP EPERID G+S+A C  GTDR    CLTHSLLFEILPPDSPKW S F EEG
Sbjct: 61  HHQQLISKPSEPERIDIGHSLASCGEGTDRRSPACLTHSLLFEILPPDSPKWGSLFDEEG 120

Query: 121 RGDLDLKGAGLNKEFGDSGQEQGGKRKKKRAKKKRANLQGGDENENWGTDVGTGSEQELT 180
           R DLD KG+GLN+EFGDSGQEQGGKRKKKRAKKKRAN Q  DE +NWG D GTGSEQELT
Sbjct: 121 RDDLDSKGSGLNREFGDSGQEQGGKRKKKRAKKKRANSQAEDETDNWGVDSGTGSEQELT 180

Query: 181 LLYPFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHR 240
           LLYPFTSSTSVIQRKIK+QYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHR
Sbjct: 181 LLYPFTSSTSVIQRKIKQQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADVIHR 240

Query: 241 KFTITKALLYKADRSSFDRLQQQ---------------------------------MLEI 300
           KFTITKALLYKADRSSFDRLQQQ                                 MLEI
Sbjct: 241 KFTITKALLYKADRSSFDRLQQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAYKKMLEI 300

Query: 301 GTCMELMEKSEKPTEKIDSEFTDISFEELLAQEKKDSFWQRNGKLRSCSS 314
           G CME++EKSEKPTE  DSEFTD+SFEELLAQEKKDSFW RNGKLRSCSS
Sbjct: 301 GNCMEIIEKSEKPTENPDSEFTDMSFEELLAQEKKDSFWHRNGKLRSCSS 350

[Close]

BLAST of Lsi02G029420 vs. NCBI nr
Match: ADN34106.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 484.2 bits (1245), Expect = 8.6e-133
Identity = 258/318 (81.13%), Postives = 268/318 (84.28%), Query Frame = 0


Query: 29  MLLCSFFVFFTFSVLVLSLSLYKKVKKIQFEQHQQLISKPIEPERIDFGNSVADCDNGTD 88
           +LLCS F+FFTF +LVLS SLYK+VKK++FE+HQQLIS PIEPE+ID GNSV DC NGTD
Sbjct: 2   LLLCS-FLFFTFFILVLSFSLYKRVKKVEFEEHQQLISNPIEPEKIDIGNSVTDCGNGTD 61

Query: 89  RTCLTHSLLFEILPPDSPKWASFFVEEGRGDLDLKGAGLNKEFGDSGQEQGGKRKKKRAK 148
           RTCLTHSLLFEILPPDSPKWASFFVE    DLDLKGA LNKEFGDSGQEQGGKRKKK+AK
Sbjct: 62  RTCLTHSLLFEILPPDSPKWASFFVEGRCDDLDLKGARLNKEFGDSGQEQGGKRKKKKAK 121

Query: 149 KKRANLQGGDENENWGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL 208
           KKRANLQ GDEN  WGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL
Sbjct: 122 KKRANLQDGDENVKWGTDVGTGSEQELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKEL 181

Query: 209 TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQ--------- 268
           TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQ         
Sbjct: 182 TLAQVRQFANCLINARSKLQHKADVIHRKFTITKALLYKADRSSFDRLQQQIYKLELEQK 241

Query: 269 ------------------------MLEIGTCMELMEKSEKPTEKIDSEFTDISFEELLAQ 314
                                   MLEIGTCMELM KSEKPTE IDSEFTD+SFEELLAQ
Sbjct: 242 RLEEDTFVYNWLQQQLKLSPAYKKMLEIGTCMELMAKSEKPTENIDSEFTDMSFEELLAQ 301

[Close]

BLAST of Lsi02G029420 vs. TAIR 10
Match: AT1G17665.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to 146 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). )

HSP 1 Score: 176.0 bits (445), Expect = 4.7e-44
Identity = 134/352 (38.07%), Postives = 185/352 (52.56%), Query Frame = 0


Query: 13  PNFPFLITNYSEGDIPMLLCSFFVFFTFSVLVLSLSLYKKVKKIQFEQHQQLISK---PI 72
           P+F  L    +    P L+ S      FS +     L K  +       Q+L+S+    +
Sbjct: 4   PHFTQLKITLNPLMYPFLVLSLLTLALFSFVSAIFFLLKASRSRAALYSQKLLSESETKL 63

Query: 73  EPER--IDFGNSVADCDNGTDRTCLTHSLLFEILPPDSPKWASFFVEEGRGDLDLKGAGL 132
           +PE    +  +      +  + T LT+S L+E+L  D  +           D D +G  +
Sbjct: 64  QPESSLSEISDEAQYQTHENEPTHLTNSRLYELLLSDKKE----------DDSDWEGDHV 123

Query: 133 NKEFGDSGQEQGGKRKKKRAKKKRANLQG---GDENE----------NWGTDVGTGSEQ- 192
            K+          K+KK R KKK+++++G   G E +          N  TD  + SE  
Sbjct: 124 KKK---------KKKKKNRGKKKKSDIRGDESGGEKQLGEGEDGLVLNPRTDSISISENK 183

Query: 193 -ELTLLYPFTSSTSVIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKAD 252
            E   LYPFTS++S  QRKIK+QYD+L+KC  +K LTLAQV +FANCLI A+++LQHK++
Sbjct: 184 PEFVCLYPFTSTSSATQRKIKQQYDQLVKCNNAKGLTLAQVGEFANCLIEAKNELQHKSE 243

Query: 253 VIHRKFTITKALLYKADRSSFDRLQQQ--------------------------------- 312
           VI RKF+ITKALL+KADRSSFDRL+QQ                                 
Sbjct: 244 VIKRKFSITKALLFKADRSSFDRLRQQIYKLEMEQKRVEEDALVYNWLQQQLKLSPAYKK 303

The following BLAST results are available for this feature:

BLAST of Lsi02G029420 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G029420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCQ0	8.3e-150	83.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451370 PE=4 SV=1	[more]
A0A1S3CHA9	1.6e-148	81.50	uncharacterized protein LOC103500732 OS=Cucumis melo OX=3656 GN=LOC103500732 PE=...	[more]
A0A6J1D702	6.0e-140	77.14	uncharacterized protein LOC111017622 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
E5GCA7	4.2e-133	81.13	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7V0S5	7.1e-133	81.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lsi02G029420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896162.1	1.6e-155	84.68	uncharacterized protein LOC120084452 [Benincasa hispida]	[more]
XP_004141679.1	1.7e-149	83.00	uncharacterized protein LOC101218544 [Cucumis sativus] >KGN45531.1 hypothetical ...	[more]
XP_008462357.1	3.2e-148	81.50	PREDICTED: uncharacterized protein LOC103500732 [Cucumis melo]	[more]
XP_022149132.1	1.2e-139	77.14	uncharacterized protein LOC111017622 [Momordica charantia]	[more]
ADN34106.1	8.6e-133	81.13	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of Lsi02G029420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17665.1	4.7e-44	38.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..167
None	No IPR available	PANTHER	PTHR35991	CA-RESPONSIVE PROTEIN	coord: 258..313 coord: 27..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G029420.1	Lsi02G029420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane