Lsi02G029240 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G029240
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	acidPPc domain-containing protein
Location	chr02: 35450855 .. 35452162 (-)
RNA-Seq Expression	Lsi02G029240
Synteny	Lsi02G029240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAAACGTATATACCGTCTTTTAGTTTCGTCGAAAATGGGGAAAGTGACGGTCCAGCGAACGGACACGAGTGAGTGAGACCAGGTAAAGGTTAATCAATCCCGCGGAAAAGCTCGAATGGAGGAGCGAAAGACTGAGATCAAAGGTTCTTCCTCAGGTATTTTCAAACTTTCAATCTCTCTATCGTTCTCATCAACTTCATTTTAGGAACTGTTGTTTTGATTGCTCTGATGTTATGTGCGTTTCTTCAACATGATGTTTCTGGAATATAATGAGCTTGGAATTGTTGCACTAAGTAAAGATTATCCAGTGGCATACAGTTGATTACGTATTTCAGCTCTTTCAGTGATCTGTTGTCGGCGATTGTTGTGTTATCGAGCTAAAAAACACTTTGGCAGCCCGTATTTTCAGTAATTGTTAGCGTTGATTGGTTACTGCGGCTATCTCTCAGGCAATGTTTGGTTTCAAAGCATTAGCATGGTTTAGGTTTCTAGGATTAATCGATTCAATGGGAATTATCAATTATGTTTAGTTGAAAGGAATCTGCTGTCATTCTCTAAGAGATACTTTTCCTTCTGCGCTTATTAGAGCAAATTAATTTCATAGCACATGAATTTTGAACTTATGGTTGTTAAGGTGTTGCTCCAATTTTATGAGGAGACTTTTTTTTATCAGAAACAATTTCTCTGTTAAAGATTCAATAGTTTGATTTTGCTCGAGGTGTTTGGCTGACTGACATTATATATATATATATTTTCTTCTTGGCGTGCAATGTGAAGAAAAAGATGCAAAATCGCCCAATATTTTTGAAAGAGCGAAAGAAGAGATAGAGGCTGTGATCCACTCTAATAAATCACCACGGCATCACAAAGAAACGCATGGAAGAAGCAATGATATTGACGAGACTACGCCCGCCGATGAAGTAAAGGCCCCTGGAGTGTTTGGAAGAGTCAAGGAAGAGGTTGAGGCCCTTGTGGGAGCAATTCATCCCAAGAAGGATTCCGGCAATCATTAGTTTTCTTTTAAGCAAGGAAGGGGGTTGACTCCATGCTGTAATAAGGTTTGCTTTTTTCGATGATTCTTAGTTTCTTTTAAGATGCAACTCCATGCCATCTACCTTGTTATTTGAAAACATTAGCTGGAAAATAACTTGTTTGAAGATTGACATGAAAATTAGACTATGTCTGATCTGTCTCGCATACTGTTTAAAGTATGTAATCAATATAGAAACACCATTAAGGTGTTTACATTATATACTTTTGTAGGTACCATTATATATATATTGACCAACAAAACCCACATTTCCTA

mRNA sequence

TCGAAACGTATATACCGTCTTTTAGTTTCGTCGAAAATGGGGAAAGTGACGGTCCAGCGAACGGACACGAGTGAGTGAGACCAGGTAAAGGTTAATCAATCCCGCGGAAAAGCTCGAATGGAGGAGCGAAAGACTGAGATCAAAGGTTCTTCCTCAGAAAAAGATGCAAAATCGCCCAATATTTTTGAAAGAGCGAAAGAAGAGATAGAGGCTGTGATCCACTCTAATAAATCACCACGGCATCACAAAGAAACGCATGGAAGAAGCAATGATATTGACGAGACTACGCCCGCCGATGAAGTAAAGGCCCCTGGAGTGTTTGGAAGAGTCAAGGAAGAGGTTGAGGCCCTTGTGGGAGCAATTCATCCCAAGAAGGATTCCGGCAATCATTAGTTTTCTTTTAAGCAAGGAAGGGGGTTGACTCCATGCTGTAATAAGGTTTGCTTTTTTCGATGATTCTTAGTTTCTTTTAAGATGCAACTCCATGCCATCTACCTTGTTATTTGAAAACATTAGCTGGAAAATAACTTGTTTGAAGATTGACATGAAAATTAGACTATGTCTGATCTGTCTCGCATACTGTTTAAAGTATGTAATCAATATAGAAACACCATTAAGGTGTTTACATTATATACTTTTGTAGGTACCATTATATATATATTGACCAACAAAACCCACATTTCCTA

Coding sequence (CDS)

ATGGAGGAGCGAAAGACTGAGATCAAAGGTTCTTCCTCAGAAAAAGATGCAAAATCGCCCAATATTTTTGAAAGAGCGAAAGAAGAGATAGAGGCTGTGATCCACTCTAATAAATCACCACGGCATCACAAAGAAACGCATGGAAGAAGCAATGATATTGACGAGACTACGCCCGCCGATGAAGTAAAGGCCCCTGGAGTGTTTGGAAGAGTCAAGGAAGAGGTTGAGGCCCTTGTGGGAGCAATTCATCCCAAGAAGGATTCCGGCAATCATTAG

Protein sequence

MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH

Homology

[Close]

BLAST of Lsi02G029240 vs. ExPASy TrEMBL
Match: A0A0A0KAY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450740 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.3e-38
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPAD 60
          MEE KTEIKGSSSE++ KSPNIFERAKEEIEAVIH NKSPRHHKETHGRS+DIDETTPAD
Sbjct: 1  MEESKTEIKGSSSEREPKSPNIFERAKEEIEAVIHCNKSPRHHKETHGRSDDIDETTPAD 60

Query: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          EVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Sbjct: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGSH 91

[Close]

BLAST of Lsi02G029240 vs. ExPASy TrEMBL
Match: A0A5D3BY12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001000 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.6e-37
Identity = 83/91 (91.21%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPAD 60
          MEE K EIKGSSSEK+ KSPNIFERAKEEIEAV H NKSPRHHKETHGRS+DIDETTPAD
Sbjct: 1  MEEPKAEIKGSSSEKEPKSPNIFERAKEEIEAVTHCNKSPRHHKETHGRSDDIDETTPAD 60

Query: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          EVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Sbjct: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGSH 91

[Close]

BLAST of Lsi02G029240 vs. ExPASy TrEMBL
Match: A0A1S3CGT3 (uncharacterized protein LOC103500717 OS=Cucumis melo OX=3656 GN=LOC103500717 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.6e-37
Identity = 83/91 (91.21%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPAD 60
          MEE K EIKGSSSEK+ KSPNIFERAKEEIEAV H NKSPRHHKETHGRS+DIDETTPAD
Sbjct: 1  MEEPKAEIKGSSSEKEPKSPNIFERAKEEIEAVTHCNKSPRHHKETHGRSDDIDETTPAD 60

Query: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          EVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Sbjct: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGSH 91

[Close]

BLAST of Lsi02G029240 vs. ExPASy TrEMBL
Match: A0A6J1CT17 (uncharacterized protein LOC111014044 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014044 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35
Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPAD 60
          MEE KT IK SSS KDAK+PN+FERAKEEIEA++HSNKSPRHHKETHGRS+DIDETTP+D
Sbjct: 1  MEEPKTVIKDSSSGKDAKAPNLFERAKEEIEAIVHSNKSPRHHKETHGRSDDIDETTPSD 60

Query: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          EVKAPGVFGRVKEE+EALVG IHPKKDS NH
Sbjct: 61 EVKAPGVFGRVKEEIEALVGTIHPKKDSDNH 91

[Close]

BLAST of Lsi02G029240 vs. ExPASy TrEMBL
Match: A0A6J1CRC8 (uncharacterized protein LOC111014044 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014044 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.8e-35
Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MEERKTEIKGSSSE-KDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPA 60
          MEE KT IK SSSE KDAK+PN+FERAKEEIEA++HSNKSPRHHKETHGRS+DIDETTP+
Sbjct: 1  MEEPKTVIKDSSSEGKDAKAPNLFERAKEEIEAIVHSNKSPRHHKETHGRSDDIDETTPS 60

Query: 61 DEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          DEVKAPGVFGRVKEE+EALVG IHPKKDS NH
Sbjct: 61 DEVKAPGVFGRVKEEIEALVGTIHPKKDSDNH 92

[Close]

BLAST of Lsi02G029240 vs. NCBI nr
Match: XP_038900254.1 (uncharacterized protein LOC120087339 [Benincasa hispida] >XP_038900255.1 uncharacterized protein LOC120087339 [Benincasa hispida])

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPAD 60
          MEE KTEIK SSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRS+DIDETTPAD
Sbjct: 1  MEEPKTEIKDSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSDDIDETTPAD 60

Query: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          EVKAPGVFGRVKEEVEAL+GAIHPKKDS NH
Sbjct: 61 EVKAPGVFGRVKEEVEALIGAIHPKKDSDNH 91

[Close]

BLAST of Lsi02G029240 vs. NCBI nr
Match: KGN45517.1 (hypothetical protein Csa_016837 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 8.8e-38
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPAD 60
          MEE KTEIKGSSSE++ KSPNIFERAKEEIEAVIH NKSPRHHKETHGRS+DIDETTPAD
Sbjct: 1  MEESKTEIKGSSSEREPKSPNIFERAKEEIEAVIHCNKSPRHHKETHGRSDDIDETTPAD 60

Query: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          EVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Sbjct: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGSH 91

[Close]

BLAST of Lsi02G029240 vs. NCBI nr
Match: XP_008462344.1 (PREDICTED: uncharacterized protein LOC103500717 [Cucumis melo] >KAA0059422.1 uncharacterized protein E6C27_scaffold242G001490 [Cucumis melo var. makuwa] >TYK03904.1 uncharacterized protein E5676_scaffold347G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 7.5e-37
Identity = 83/91 (91.21%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPAD 60
          MEE K EIKGSSSEK+ KSPNIFERAKEEIEAV H NKSPRHHKETHGRS+DIDETTPAD
Sbjct: 1  MEEPKAEIKGSSSEKEPKSPNIFERAKEEIEAVTHCNKSPRHHKETHGRSDDIDETTPAD 60

Query: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          EVKAPGVFGRVKEEVEALVGAIHPKKDSG+H
Sbjct: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGSH 91

[Close]

BLAST of Lsi02G029240 vs. NCBI nr
Match: XP_022144348.1 (uncharacterized protein LOC111014044 isoform X2 [Momordica charantia])

HSP 1 Score: 158.3 bits (399), Expect = 3.1e-35
Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1  MEERKTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPAD 60
          MEE KT IK SSS KDAK+PN+FERAKEEIEA++HSNKSPRHHKETHGRS+DIDETTP+D
Sbjct: 1  MEEPKTVIKDSSSGKDAKAPNLFERAKEEIEAIVHSNKSPRHHKETHGRSDDIDETTPSD 60

Query: 61 EVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          EVKAPGVFGRVKEE+EALVG IHPKKDS NH
Sbjct: 61 EVKAPGVFGRVKEEIEALVGTIHPKKDSDNH 91

[Close]

BLAST of Lsi02G029240 vs. NCBI nr
Match: XP_022144340.1 (uncharacterized protein LOC111014044 isoform X1 [Momordica charantia])

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-34
Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MEERKTEIKGSSSE-KDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPA 60
          MEE KT IK SSSE KDAK+PN+FERAKEEIEA++HSNKSPRHHKETHGRS+DIDETTP+
Sbjct: 1  MEEPKTVIKDSSSEGKDAKAPNLFERAKEEIEAIVHSNKSPRHHKETHGRSDDIDETTPS 60

Query: 61 DEVKAPGVFGRVKEEVEALVGAIHPKKDSGNH 92
          DEVKAPGVFGRVKEE+EALVG IHPKKDS NH
Sbjct: 61 DEVKAPGVFGRVKEEIEALVGTIHPKKDSDNH 92

[Close]

BLAST of Lsi02G029240 vs. TAIR 10
Match: AT1G72690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17490.1); Has 59 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 12 SSEKDAKSPNIFERAKEEIEAVIHSNKS-PRHH-KETHGRSNDIDETTPADEVKAPGVFG 71
          S EK  KSPN+FER KEEIEA+ H  KS  RHH KETHG S+DIDE+TP D VK PG F 
Sbjct: 7  SEEKTVKSPNVFERVKEEIEAMGHHEKSKSRHHDKETHGTSDDIDESTPIDYVKGPGFFQ 66

Query: 72 RVKEEVEALVGAIHPKKDS 89
          R+KEE+EA+  A+ PK+ S
Sbjct: 67 RLKEEIEAIFNAVTPKRSS 85

[Close]

BLAST of Lsi02G029240 vs. TAIR 10
Match: AT5G57000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 4.1e-17
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 5   KTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPR----HHKETHGRSNDIDETTPAD 64
           K E K    E   K PN+ ++A+E+++++    K PR    HHKETHGRS+DI E TP D
Sbjct: 57  KMEFKSDKPEDGKKKPNMLKKAREDLKSLFLKEKPPRHLHHHHKETHGRSDDISENTPVD 116

Query: 65  EVKAPGVFGRVKEEVEALVGAIHPKK 87
           EVKAP V  R KEE+EA++  IH KK
Sbjct: 117 EVKAPNVLERAKEEIEAVIDTIHSKK 142

[Close]

BLAST of Lsi02G029240 vs. TAIR 10
Match: AT5G57000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 1.7e-15
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 5   KTEIKGSSSEKDAKSPNIFERAKEEIEAVIHSNKSPR----HHKETHGRSNDIDETTPAD 64
           K E K S      K PN+ ++A+E+++++    K PR    HHKETHGRS+DI E TP D
Sbjct: 57  KMEFK-SDKPDGKKKPNMLKKAREDLKSLFLKEKPPRHLHHHHKETHGRSDDISENTPVD 116

Query: 65  EVKAPGVFGRVKEEVEALVGAIHPKK 87
           EVKAP V  R KEE+EA++  IH KK
Sbjct: 117 EVKAPNVLERAKEEIEAVIDTIHSKK 141

[Close]

BLAST of Lsi02G029240 vs. TAIR 10
Match: AT1G17490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 3.4e-11
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 12 SSEKDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDETTPADEVKAPGVFGRV 71
          SS  + K+ N+    KEE E++ H        KETHGRS DIDE T  D+VK PGV GR+
Sbjct: 7  SSLSEVKT-NVIGSRKEEKESMFHG-------KETHGRSEDIDEKTRVDDVKGPGVLGRM 66

Query: 72 KEEVEALVGAIHPKKDS 89
           EE+EA+V A+ P K S
Sbjct: 67 MEEMEAIVDAVTPNKSS 75

The following BLAST results are available for this feature:

BLAST of Lsi02G029240 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G029240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAY9	4.3e-38	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450740 PE=4 SV=1	[more]
A0A5D3BY12	3.6e-37	91.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGT3	3.6e-37	91.21	uncharacterized protein LOC103500717 OS=Cucumis melo OX=3656 GN=LOC103500717 PE=...	[more]
A0A6J1CT17	1.5e-35	85.71	uncharacterized protein LOC111014044 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CRC8	5.8e-35	85.87	uncharacterized protein LOC111014044 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lsi02G029240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900254.1	1.8e-38	94.51	uncharacterized protein LOC120087339 [Benincasa hispida] >XP_038900255.1 unchara...	[more]
KGN45517.1	8.8e-38	92.31	hypothetical protein Csa_016837 [Cucumis sativus]	[more]
XP_008462344.1	7.5e-37	91.21	PREDICTED: uncharacterized protein LOC103500717 [Cucumis melo] >KAA0059422.1 unc...	[more]
XP_022144348.1	3.1e-35	85.71	uncharacterized protein LOC111014044 isoform X2 [Momordica charantia]	[more]
XP_022144340.1	1.2e-34	85.87	uncharacterized protein LOC111014044 isoform X1 [Momordica charantia]	[more]

BLAST of Lsi02G029240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72690.1	1.5e-19	63.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G57000.1	4.1e-17	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G57000.2	1.7e-15	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G17490.1	3.4e-11	49.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	PANTHER	PTHR35277	OS09G0363700 PROTEIN	coord: 1..89
None	No IPR available	PANTHER	PTHR35277:SF12	PROTEIN, PUTATIVE-RELATED	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G029240.1	Lsi02G029240.1	mRNA