Lsi02G029040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G029040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Transcription initiation factor TFIID subunit 12b
Location	chr02: 35249154 .. 35254992 (-)
RNA-Seq Expression	Lsi02G029040
Synteny	Lsi02G029040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAGTACTTCGTCGCCTAGACCGGTTCAACCCAACCCGATGGACCCTTCGCCACCGCCGCCGCAGCAACAACCGCAAGTTCAACCTTCAACCACCGCTATTCCACAAAATTCATCAAATCCATCAAATTCCTCTGTAAATCCTCCTATTCCATCGCCTTCTGCGCTTGCTCAATCGCCTTCGATTGACCACTTACATTCGCTATCTCAAATCTCTTCTCCTCCTCTTTCGCACATCTCTCTCCCGCAAAATCAACAGCAACAGCAACAGCTGAGCCCTGCGGTTGGATTGGATTACCAGCAGAAGCCTCTACAGCAGCAACAGCAGCAGCAGCAACAGCAACAGCAACATTCGCAGCAATTGGTGCAACAACCTCAGAATGCGAGTGCGATGACGAATTTCCAAATCCAGCAGGCTTTACAGCGGTCCCCTTCAATGTCTCGGTTGAACCAAATGCAACCACAGCAGCAGCAGCAGTTTGGGATGATGAGACAGCAACCGGGGCTTTATGGTCAGATGCATTTTGGTGCGTCTTCTACAAACCAGCAGCAGCAACAGCAGCAACAGCAGCAACAGCCTAACCAACAACAGCAAATAGGAACTGGGAATCTGTCGCGGTCTGCATTAATTGGTCAGGGTAACCATTTGCCCATGTTGTCTGGAGCGGCTCCGTTTAATTTGCAGTCACAATTACTGGCTTCGGTATGTATTGAATTCTTGTCACTCGTTGGTCTTAAATTGGTATTGATGCTACTTTGATTTTGGGATGTTGTTAGACAGTACTGTGAATTCGATTTTTTGATATTTGAAATGGAGTTGAAGAGCTTTATAGGCATGATGGGTTATGCCACAGTAGTTGCCTTCTATTGTTTAATTACGATTCTAAGTTACTTAATTTGTTGACATTAGAAATCAAATAAAATATATTTTGTTTTTTAAATTTCACTGAAACCGAACATTTTGTATAGTCGAAGCAGAAAGCTGGTTTAGTCCAGAGTCAGTTTCAGTCGAGTAACTCTCATGGGCAAGCTTTGCAAGGAATTCAAGCAATGGGGATGATGGGTTCAATGAATTTGACCTCACAGCTAAGAGCTAATGGCCTTGCCTCGTCATATGCCCAACAGAGAATAAACCAAGGTCAAATAAGGCAGCAATTATCTCAACAAAGTTCACTCACGTCTCCACAGGTTTCTTGGCAACGCATCTTTGCTTTGTATCTAAGTTCATTATTACAATAATGGGTCTGAGCTTTTATTTCTATATTCGTGTTGTTAGATTCCTATATGCCAAATTTGAACCAGGGCAGATTAATGCTTTGTTTGGTTACTTTGGTAATTGCTTGGATATTATTTATGCAGTTCATCAAACATAATAGTTTCTTGACTCTAATAGAAGTGTAGTACTCCGGCTTTTATCTCATAGAACTTGTTTTTGTAATGCTAAACATTCATTGCATTACAAATAATGCTCATAGGGCATACTAGCATATTTATCAAGTACACGTCTCTAATTTCAAGTGGTGCCCATTAACACTCCTTTTTTATTTTGGTACATGGTATAACTCTATTTATTGTCATCATCGCTGATTTGTCTGTCATGTTCTCTAACTCAATCCGCTCAACTTTGGTATAGCAGTAAGTGCAGCATCACTTTATTACTTTAATGGATAGGTTAATATGCTAATTCGATTTGATAATCTTACTATACAATCTTGCTATTTTGTTTTGTGTGTAGCTATTAGTAACTATAAAATTGCGGGCATGATTGTGACATCCAGTCAATTTTATTAAATTGCAGGTTCAGAACTTACCGAGAATGTCAAATCTCGCATTTATGAATCAACAATTGACCAATTTGGCTCAGAATGGGCAGCCAACCATGATGCAGAACTCTTTGCAACAGCAACAGTGGCTGAAGCAAATGCCATCAATGTCTACCCCTGGCTCACCTTCATTTCGTCTGCAACAGAGGCAACAAGTCCTGTTACAGCAGCAACTGGCTTCATCTAGTCAATTGCATCAGAACTCCATGTCCTTGAATCCTCAACAATTTCCTCAGCTTGTACAGCAACAGTCGTCCATGGGACATCAACAACTGCATCAACAGCAACAGCAGCAACCTCAGTCACAACAACAGCAATCACAACAACAGCTACAACAGCAGCCACTTCATCAACAACAGCAGCTACTTCAACAAGCTTCTCCACAGCAATCTCTGCAACCAGTATTGCATCAGCATCAGCAGCATTCTCCTAGGATAGCTGGACTTGCGGGCCAGAAATCTCTCAGTTTGACTGGATCACATCCAGATGCCACAGCATCTGGCGCTAGTACACCTGGGGGAAGTTCAAGCCAAGGGACAGAGGCTGCCACTCAAGTCCTTGGGAAGAGAAAGATACAAGATCTGGTTTCACAGGTTCTGCCTTGACTTATCACATCTCTTATTTACTCTATGTCTTTAATGTGCTTCTATGTTTTTTTTTCTTTTCAATTTTGTGCTCACTTTAGTTGAAATTCGAATGTCTGCAGGTAGATCCACATGGAAAGCTGGAACCTGAAGTTGAAGATCTTCTCTTGGAGATGGCCGATGAGTTTATTGATTCGGTGAGACCTCCTAGTACTACTACTATTTCCCTATACTTCTTTGCACATTTTCACCTAATTTCTTACACATACTATAGTAAGTGCATATGTGCCAGAAGTAATAGTCATAATATTGGTACACATAAAAAGTTAGTAATTCACTATTGAAGCACTCTGTTCTATTATATCAAAATATTTACAATACAAAGTTTGTTAAAAAAATCTGCATAATGTCATAGAGGATCATGTTGGAGCATTTACCAAAAATAATATGCTATTCTATGACACATTAATCACCAGAAAACTATGTTTTTTTGGAATATATAATGTGCATTTTGGTATGAAGTTTCATCTTACAGAACTAAACTTTGGGATGAAAAAACTTTTATATATAGATATATATTATTCTTTTGTAATCTGTCGAAGTCCAAATATTTGTTCATTTTATTTCATTTTAGACTGCTGTAATTATCCATTCTGTTGACTTAGTGATTCTGGTGCAGCATGATTTGATCATATTCCTTATGTCTGAAATTATCCAACTATTTCTCTGATAATTGTTGTTAAAACGAAGATTATAATTAAACTTGAATAAAAAGAACAAGCTCACAACTAAAAACCCCAAACTAATTACAAGAATGAATCCCAATCCAAAAAAACGAGGCCAAGTTGGTAAATACAAAAAGTAAGATTAACAGATGCCCACAAGTTAGATCTAATCGACTCCCAAAGATCCTCATCAGACCTCTCAGACCGTCTAAGGTTCCTCTCAAGCCAGTGCTCCACAATATGGCAAAAAAGAGGGTCTGCTACAAAACTCTTCCGTTGTCCCAAAAAGGAGGGTTCAAGAAAACCTCTTCGATCATGCAGCAATACCCTCTGTTATGAGCCAGTACAGCCAACAAGTCCAGAATAAGAGCAGCTCCTCACTCATGGTGCAGATTATATTTTTATAGGCAGTAGCTTGTTATATTTTGTAATAATGATAAATTGCTATGTCTCTTCTCCTGATTAACTTTTTAGGGCCCTATTTTTGGGATCTTTTTCCTATTTAATAAGGTGTTAGCCATGAGTGGACGGAGTGGTATATGCCTTCTTTAGGACTGATCAGTCGGTTCCTCTGTCATTTATCTGTTTAATAGAGATGTCTATACTCCCTTGCGCTTATTATTCTCCCTTCTCTCTCACCAACAAAAACCTGTGAATCAACTCTCACTAGAACATTAGGAAAAAAAATACTTAGCCACTAGGACGCCGATGTGGACACTTCTAGGTCCTTTTAAAATCTACGTATTCTTATTGAAAGCTATATTCTCATTATTGCCCCAACTTACCATTTTGGTGTTACAAACAAATCAAGTGGACTGGCGTTAGAGTCCTTTTGGTGGATGAGTTTCATAGTTGTGTGGATTAATTGTTATGTTCTTCTATTGCAATATTATTTATATAGAGGTATCTAATAATTCATGTTAATATCCTGGCTCATTCATCAGCTACTATCATCTCAGTGATTGGATGGTTTATCATGTGAAAACAATTTTTTTCTTTGTTGCAATACAGGTAGTAACCTTTTCATGCAATCTGGCAAAACACCGAAAATCCTCAACTTTAGAATCCAAAGATCTATTGCTACACTTAGGTGTGTACTACTTTCCTCAAGGTCTTTTTTTTTTAACTTGATTTCTTGAATGCCATGCATGATGCATCAGCAGCATATGGCTCCCTTCTCTGATTTCAAGTTTTGATTTTAGCGAGTGTCAATTCATTCATGATAGTTTTGAGGTCACGAAAAAAAAGTCTGGATGCGAATATGCTAATTGGTGAAATGAAAAAATGTTCAGCTATTCTGTTCTAGATACAGGGAGGGCAGTGGGAACAATGCCACCTTACATTTTGGCAATAAAGTGAAGAATGACAGTATTTTATTTCTGCATTATTTAATTTTTTTATAAGCTATTGAAGGTGACTAAAGGTTACTCGTGGGAAGCTCTTACCCGACAACCACTTTTTTTTTAAAAAAAGAAAAGGTTGCAGACTCTTTGGAGCAAAAGATCCTTAATTAGATTCTTGACTTGTCACTTTCTAACCATCACATGATTATTATTTACTGGCCATAACATATGGTTTTCAAAACAAAAAAGGAAAAAAAAAAATTCTGGTGAGGCTTTCTTGATTTAATTGTTTATAAACCATAATTGATTCTTTCCGATAGTCCAAGTTTTTATCATTAGTGATAATTCAACCTAAAGTGCACTAGGTTACTAGTTTCTTGATTCATCGTGTTTGGTAGCTATGGTATTGGATCCTATAGTATTAGACAAAGCTTTACCAATCATAAATTGTGGATAATGTGCAGAGAAGAACTGGCAGTTGAACGTTCCTGGATATTCAAGTGACGAGTGGAAGAACCACAACAAAAATGTAAGAAAATTATCTTATTCTCTCAAAAGAAGCATTCTATTTAATTTAGCTTTCAAATTTTCCTTGTGTTTAACCATATGGAGTTTTTTAAATATTGTAGTTATCATCCAGTGATGTCCACAAGAAACGTTTGGACATGGTAAGTTGGACTATCTGTTCAAGTGTTCGACCCATTTCTTCTTTTATCATTTGTCTCAAATTTTCTCTTCTGGTATTTCACCAGATACGCATATTGAAGGAAGCCTCCCGAGTCGAAACAAACGTAAACAGCCCTAAAGAGATGGTACGACAAGGGGTTGGAATGTCCGTTGGTACCAACACTCTAACGAGGCCTTCACCGAGTTCTGAACAACTATTGTCACAGACAGCCGGTTCACAGCTGCTGCAACAAATGACGAGGTTTTAATGTATTAACTATGTTTGAAACTAATGCTTGGTAGATCCCAACGACTTGGTGAATAACCAACCCCATTGTCAGTTCAGTGATACAACAATAAAATGAGATTTAGAGGATGCTATATCAGAGGGGACCTGGACTGGACTTCTGTGTGGAGTGGAGTGTGATGGTTCTTAGTGATACGCCTTTCGAAATCAATTTTTTTAGGCTGTATAATATGAAGATGCATTATCTGGAACATGGGCGTAATGTTAATTGTACAAAATATTTGGCAGTCATATTAGTATAGGCCTTAAGTTATTGTTGTGTCTACCATGGAGGACATTTTCAATTTATGATTGATAGTCTTTACAATCTCAAGTTGTCTGAAGTTTGTTGATCAGGATCATAGTACAATTACTACAAATGGAATAGAAGATATGATTTTTCAGCC

mRNA sequence

ATGGCAGACAGTACTTCGTCGCCTAGACCGGTTCAACCCAACCCGATGGACCCTTCGCCACCGCCGCCGCAGCAACAACCGCAAGTTCAACCTTCAACCACCGCTATTCCACAAAATTCATCAAATCCATCAAATTCCTCTGTAAATCCTCCTATTCCATCGCCTTCTGCGCTTGCTCAATCGCCTTCGATTGACCACTTACATTCGCTATCTCAAATCTCTTCTCCTCCTCTTTCGCACATCTCTCTCCCGCAAAATCAACAGCAACAGCAACAGCTGAGCCCTGCGGTTGGATTGGATTACCAGCAGAAGCCTCTACAGCAGCAACAGCAGCAGCAGCAACAGCAACAGCAACATTCGCAGCAATTGGTGCAACAACCTCAGAATGCGAGTGCGATGACGAATTTCCAAATCCAGCAGGCTTTACAGCGGTCCCCTTCAATGTCTCGGTTGAACCAAATGCAACCACAGCAGCAGCAGCAGTTTGGGATGATGAGACAGCAACCGGGGCTTTATGGTCAGATGCATTTTGGTGCGTCTTCTACAAACCAGCAGCAGCAACAGCAGCAACAGCAGCAACAGCCTAACCAACAACAGCAAATAGGAACTGGGAATCTGTCGCGGTCTGCATTAATTGGTCAGGGTAACCATTTGCCCATGTTGTCTGGAGCGGCTCCGTTTAATTTGCAGTCACAATTACTGGCTTCGTCGAAGCAGAAAGCTGGTTTAGTCCAGAGTCAGTTTCAGTCGAGTAACTCTCATGGGCAAGCTTTGCAAGGAATTCAAGCAATGGGGATGATGGGTTCAATGAATTTGACCTCACAGCTAAGAGCTAATGGCCTTGCCTCGTCATATGCCCAACAGAGAATAAACCAAGGTCAAATAAGGCAGCAATTATCTCAACAAAGTTCACTCACGTCTCCACAGGTTCAGAACTTACCGAGAATGTCAAATCTCGCATTTATGAATCAACAATTGACCAATTTGGCTCAGAATGGGCAGCCAACCATGATGCAGAACTCTTTGCAACAGCAACAGTGGCTGAAGCAAATGCCATCAATGTCTACCCCTGGCTCACCTTCATTTCGTCTGCAACAGAGGCAACAAGTCCTGTTACAGCAGCAACTGGCTTCATCTAGTCAATTGCATCAGAACTCCATGTCCTTGAATCCTCAACAATTTCCTCAGCTTGTACAGCAACAGTCGTCCATGGGACATCAACAACTGCATCAACAGCAACAGCAGCAACCTCAGTCACAACAACAGCAATCACAACAACAGCTACAACAGCAGCCACTTCATCAACAACAGCAGCTACTTCAACAAGCTTCTCCACAGCAATCTCTGCAACCAGTATTGCATCAGCATCAGCAGCATTCTCCTAGGATAGCTGGACTTGCGGGCCAGAAATCTCTCAGTTTGACTGGATCACATCCAGATGCCACAGCATCTGGCGCTAGTACACCTGGGGGAAGTTCAAGCCAAGGGACAGAGGCTGCCACTCAAGTCCTTGGGAAGAGAAAGATACAAGATCTGGTTTCACAGGTAGATCCACATGGAAAGCTGGAACCTGAAGTTGAAGATCTTCTCTTGGAGATGGCCGATGAGTTTATTGATTCGGTAGTAACCTTTTCATGCAATCTGGCAAAACACCGAAAATCCTCAACTTTAGAATCCAAAGATCTATTGCTACACTTAGAGAAGAACTGGCAGTTGAACGTTCCTGGATATTCAAGTGACGAGTGGAAGAACCACAACAAAAATTTATCATCCAGTGATGTCCACAAGAAACGTTTGGACATGATACGCATATTGAAGGAAGCCTCCCGAGTCGAAACAAACGTAAACAGCCCTAAAGAGATGGTACGACAAGGGGTTGGAATGTCCGTTGGTACCAACACTCTAACGAGGCCTTCACCGAGTTCTGAACAACTATTGTCACAGACAGCCGGTTCACAGCTGCTGCAACAAATGACGAGGTTTTAATGTATTAACTATGTTTGAAACTAATGCTTGGTAGATCCCAACGACTTGGTGAATAACCAACCCCATTGTCAGTTCAGTGATACAACAATAAAATGAGATTTAGAGGATGCTATATCAGAGGGGACCTGGACTGGACTTCTGTGTGGAGTGGAGTGTGATGGTTCTTAGTGATACGCCTTTCGAAATCAATTTTTTTAGGCTGTATAATATGAAGATGCATTATCTGGAACATGGGCGTAATGTTAATTGTACAAAATATTTGGCAGTCATATTAGTATAGGCCTTAAGTTATTGTTGTGTCTACCATGGAGGACATTTTCAATTTATGATTGATAGTCTTTACAATCTCAAGTTGTCTGAAGTTTGTTGATCAGGATCATAGTACAATTACTACAAATGGAATAGAAGATATGATTTTTCAGCC

Coding sequence (CDS)

ATGGCAGACAGTACTTCGTCGCCTAGACCGGTTCAACCCAACCCGATGGACCCTTCGCCACCGCCGCCGCAGCAACAACCGCAAGTTCAACCTTCAACCACCGCTATTCCACAAAATTCATCAAATCCATCAAATTCCTCTGTAAATCCTCCTATTCCATCGCCTTCTGCGCTTGCTCAATCGCCTTCGATTGACCACTTACATTCGCTATCTCAAATCTCTTCTCCTCCTCTTTCGCACATCTCTCTCCCGCAAAATCAACAGCAACAGCAACAGCTGAGCCCTGCGGTTGGATTGGATTACCAGCAGAAGCCTCTACAGCAGCAACAGCAGCAGCAGCAACAGCAACAGCAACATTCGCAGCAATTGGTGCAACAACCTCAGAATGCGAGTGCGATGACGAATTTCCAAATCCAGCAGGCTTTACAGCGGTCCCCTTCAATGTCTCGGTTGAACCAAATGCAACCACAGCAGCAGCAGCAGTTTGGGATGATGAGACAGCAACCGGGGCTTTATGGTCAGATGCATTTTGGTGCGTCTTCTACAAACCAGCAGCAGCAACAGCAGCAACAGCAGCAACAGCCTAACCAACAACAGCAAATAGGAACTGGGAATCTGTCGCGGTCTGCATTAATTGGTCAGGGTAACCATTTGCCCATGTTGTCTGGAGCGGCTCCGTTTAATTTGCAGTCACAATTACTGGCTTCGTCGAAGCAGAAAGCTGGTTTAGTCCAGAGTCAGTTTCAGTCGAGTAACTCTCATGGGCAAGCTTTGCAAGGAATTCAAGCAATGGGGATGATGGGTTCAATGAATTTGACCTCACAGCTAAGAGCTAATGGCCTTGCCTCGTCATATGCCCAACAGAGAATAAACCAAGGTCAAATAAGGCAGCAATTATCTCAACAAAGTTCACTCACGTCTCCACAGGTTCAGAACTTACCGAGAATGTCAAATCTCGCATTTATGAATCAACAATTGACCAATTTGGCTCAGAATGGGCAGCCAACCATGATGCAGAACTCTTTGCAACAGCAACAGTGGCTGAAGCAAATGCCATCAATGTCTACCCCTGGCTCACCTTCATTTCGTCTGCAACAGAGGCAACAAGTCCTGTTACAGCAGCAACTGGCTTCATCTAGTCAATTGCATCAGAACTCCATGTCCTTGAATCCTCAACAATTTCCTCAGCTTGTACAGCAACAGTCGTCCATGGGACATCAACAACTGCATCAACAGCAACAGCAGCAACCTCAGTCACAACAACAGCAATCACAACAACAGCTACAACAGCAGCCACTTCATCAACAACAGCAGCTACTTCAACAAGCTTCTCCACAGCAATCTCTGCAACCAGTATTGCATCAGCATCAGCAGCATTCTCCTAGGATAGCTGGACTTGCGGGCCAGAAATCTCTCAGTTTGACTGGATCACATCCAGATGCCACAGCATCTGGCGCTAGTACACCTGGGGGAAGTTCAAGCCAAGGGACAGAGGCTGCCACTCAAGTCCTTGGGAAGAGAAAGATACAAGATCTGGTTTCACAGGTAGATCCACATGGAAAGCTGGAACCTGAAGTTGAAGATCTTCTCTTGGAGATGGCCGATGAGTTTATTGATTCGGTAGTAACCTTTTCATGCAATCTGGCAAAACACCGAAAATCCTCAACTTTAGAATCCAAAGATCTATTGCTACACTTAGAGAAGAACTGGCAGTTGAACGTTCCTGGATATTCAAGTGACGAGTGGAAGAACCACAACAAAAATTTATCATCCAGTGATGTCCACAAGAAACGTTTGGACATGATACGCATATTGAAGGAAGCCTCCCGAGTCGAAACAAACGTAAACAGCCCTAAAGAGATGGTACGACAAGGGGTTGGAATGTCCGTTGGTACCAACACTCTAACGAGGCCTTCACCGAGTTCTGAACAACTATTGTCACAGACAGCCGGTTCACAGCTGCTGCAACAAATGACGAGGTTTTAA

Protein sequence

MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQSPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQFGMMRQQPGLYGQMHFGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLLASSKQKAGLVQSQFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQIRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMSTPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQQQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRPSPSSEQLLSQTAGSQLLQQMTRF

Homology

[Close]

BLAST of Lsi02G029040 vs. ExPASy Swiss-Prot
Match: B2C6R6 (Transcription initiation factor TFIID subunit 12b OS=Arabidopsis thaliana OX=3702 GN=TAF12B PE=1 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 5.5e-132
Identity = 380/703 (54.05%), Postives = 464/703 (66.00%), Query Frame = 0


Query: 4   STSSPRPVQ-PNPMDPSP----PPPQQQPQVQPSTTAIPQNSSNPSNS------------ 63
           S+ SP+ +Q PNPM+PSP    P P    Q Q   TA   NS N + S            
Sbjct: 8   SSLSPKSLQSPNPMEPSPASSTPLPSSSSQQQQLMTAPISNSVNSAASPAMTVTTTEGIV 67

Query: 64  ---SVNPPIPSPSALAQSPSIDHLHSLSQISSP-PLSHISLPQNQQQQQQLSPAVGLDYQ 123
              +  P I SP+  + +P I      +QI SP PLSH S   +QQ Q Q    +    Q
Sbjct: 68  IQNNSQPNISSPNPTSSNPPIG-----AQIPSPSPLSHPSSSLDQQTQTQ---QLVQQTQ 127

Query: 124 QKPLQQQQQQQQ-------QQQQHSQQLVQQPQNAS---AMTNFQIQQALQRSPSMSRLN 183
           Q P QQQQ  QQ       Q     QQ++QQ    S    M+++QI Q+LQRSPS+SRL+
Sbjct: 128 QLPQQQQQIMQQISSSPIPQLSPQQQQILQQQHMTSQQIPMSSYQIAQSLQRSPSLSRLS 187

Query: 184 QMQPQQQQ-----QFG-MMRQQPGLYGQMHFGASSTNQQQQQQQQQQQPNQQQQIGTGNL 243
           Q+Q QQQQ     Q+G ++RQQ GLYG M+FG S + QQ QQ QQ   P         N+
Sbjct: 188 QIQQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQNQQMVNP---------NM 247

Query: 244 SRSALIGQGNHLPML---SGAAPFNLQSQLLASS-KQKAGLVQSQFQSSNSHGQALQGIQ 303
           SR+AL+GQ  HLPML   +GAA  N+Q QLLA+S +QK+G+VQ       S GQ LQG+Q
Sbjct: 248 SRAALVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPGSSGQQLQGMQ 307

Query: 304 AMGMMGSMNLTSQLRANGLASSYAQQRINQGQIRQQLSQQSSLTSPQVQNLPRMSNLAFM 363
           AMGMMGS+NLTSQ+R N   + YAQQRIN GQ+RQQLSQQ++LTSPQVQNL R S+LAFM
Sbjct: 308 AMGMMGSLNLTSQMRGN--PALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFM 367

Query: 364 NQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMSTPGSPSFRLQ--QRQQVLL--QQQLAS 423
           N QL+ LAQNGQ  MMQNSL QQQWLKQM  +++P   SFRLQ  QRQ +LL  QQQ  S
Sbjct: 368 NPQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPN--SFRLQPSQRQALLLQQQQQQLS 427

Query: 424 SSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQQQQQPQSQQQQSQQQLQQQPLHQQQQ 483
           S QLHQ+SMSLN QQ  Q++QQQ         Q  Q   Q Q QQ QQQLQQQP   QQQ
Sbjct: 428 SPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQP---QQQ 487

Query: 484 LLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTE 543
           + QQ   QQ +Q      QQ SPR+   AGQKS+SLTGS P+AT SG +TPGGSSSQGTE
Sbjct: 488 MQQQQQQQQQMQ---INQQQPSPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTE 547

Query: 544 AATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEMADEFIDSVVTFSCNLAKHRKSSTLE 603
           A  Q+LGKRKIQDLVSQVD H KL+P+VEDLLLE+AD+FIDSV +F+C+LAKHRKSS LE
Sbjct: 548 ATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLE 607

Query: 604 SKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNVNSP 662
            KD+LLHLEKN  L +PG+SS++ K   K +  +D+HKKRL M+R L E+S+ ETN ++ 
Sbjct: 608 PKDILLHLEKNLHLTIPGFSSED-KRQTKTV-PTDLHKKRLAMVRALLESSKPETNASNS 667

[Close]

BLAST of Lsi02G029040 vs. ExPASy Swiss-Prot
Match: Q940A7 (Transcription initiation factor TFIID subunit 12b OS=Arabidopsis thaliana OX=3702 GN=TAF12B PE=1 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.1e-131
Identity = 378/705 (53.62%), Postives = 461/705 (65.39%), Query Frame = 0


Query: 4   STSSPRPVQ-PNPMDPSP----PPPQQQPQVQPSTTAIPQNSSNPSNS------------ 63
           S+ SP+ +Q PNPM+PSP    P P    Q Q   TA   NS N + S            
Sbjct: 8   SSLSPKSLQSPNPMEPSPASSTPLPSSSSQQQQLMTAPISNSVNSAASPAMTVTTTEGIV 67

Query: 64  ---SVNPPIPSPSALAQSPSIDHLHSLSQISSP-PLSHISLPQNQQQQQQLSPAVGLDYQ 123
              +  P I SP+  + +P I      +QI SP PLSH S   +QQ Q Q    +    Q
Sbjct: 68  IQNNSQPNISSPNPTSSNPPIG-----AQIPSPSPLSHPSSSLDQQTQTQ---QLVQQTQ 127

Query: 124 QKPLQQQQQQQQ-------QQQQHSQQLVQQPQNAS---AMTNFQIQQALQRSPSMSRLN 183
           Q P QQQQ  QQ       Q     QQ++QQ    S    M+++QI Q+LQRSPS+SRL+
Sbjct: 128 QLPQQQQQIMQQISSSPIPQLSPQQQQILQQQHMTSQQIPMSSYQIAQSLQRSPSLSRLS 187

Query: 184 QMQPQQQQQF-----GMMRQQPGLYGQMHFGASSTNQQQQQQQQQQQPNQQQQIGTGNLS 243
           Q+Q QQQQQ       ++RQQ GLYG M+FG S + QQ QQ QQ   P         N+S
Sbjct: 188 QIQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQNQQMVNP---------NMS 247

Query: 244 RSALIGQGNHLPML---SGAAPFNLQSQLLASS-KQKAGLVQSQFQSSNSHGQALQGIQA 303
           R+ L+GQ  HLPML   +GAA  N+Q QLLA+S +QK+G+VQ       S GQ LQG+QA
Sbjct: 248 RAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPGSSGQQLQGMQA 307

Query: 304 MGMMGSMNLTSQLRANGLASSYAQQRINQGQIRQQLSQQSSLTSPQVQNLPRMSNLAFMN 363
           MGMMGS+NLTSQ+R N   + YAQQRIN GQ+RQQLSQQ++LTSPQVQNL R S+LAFMN
Sbjct: 308 MGMMGSLNLTSQMRGN--PALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMN 367

Query: 364 QQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMSTPGSPSFRLQ--QRQQVLL-----QQQL 423
            QL+ LAQNGQ  MMQNSL QQQWLKQM  +++P   SFRLQ  QRQ +LL     QQQ 
Sbjct: 368 PQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPN--SFRLQPSQRQALLLQQQQQQQQQ 427

Query: 424 ASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQQQQQPQSQQQQSQQQLQQQPLHQQ 483
            SS QLHQ+SMSLN QQ  Q++QQQ         Q  Q   Q Q QQ QQQLQQQP   Q
Sbjct: 428 LSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQP---Q 487

Query: 484 QQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQG 543
           QQ+ QQ   QQ +Q      QQ SPR+   AGQKS+SLTGS P+AT SG +TPGGSSSQG
Sbjct: 488 QQMQQQQQQQQQMQ---INQQQPSPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQG 547

Query: 544 TEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEMADEFIDSVVTFSCNLAKHRKSST 603
           TEA  Q+LGKRKIQDLVSQVD H KL+P+VEDLLLE+AD+FIDSV +F+C+LAKHRKSS 
Sbjct: 548 TEATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSV 607

Query: 604 LESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNVN 662
           LE KD+LLHLEKN  L +PG+SS++ K   K +  +D+HKKRL M+R L E+S+ ETN +
Sbjct: 608 LEPKDILLHLEKNLHLTIPGFSSED-KRQTKTV-PTDLHKKRLAMVRALLESSKPETNAS 667

[Close]

BLAST of Lsi02G029040 vs. ExPASy Swiss-Prot
Match: Q9SR71 (Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana OX=3702 GN=TAF12 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.4e-17
Identity = 190/607 (31.30%), Postives = 264/607 (43.49%), Query Frame = 0


Query: 12  QPNPMDPSPPPPQQQPQVQPS-----TTAIPQNSSNPSNSSVNPPIPSPSALAQSPSIDH 71
           QP     +  PP+  PQ   S     T   P  S+NPS SSV   IPS S   QSPS++ 
Sbjct: 3   QPRQSSTASQPPETPPQPSDSKPSTLTQIQPTPSTNPSPSSVVSSIPS-SPAPQSPSLNP 62

Query: 72  LHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQ--QKPLQQQQQQQQQQQQHSQQLV 131
             +  Q + P    ++ P  QQQQ    P V    Q   +P QQ           S  L 
Sbjct: 63  NPNPPQYTRP----VTSPATQQQQHLSQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLS 122

Query: 132 QQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQFGMMRQQPGLYGQMHFGASSTNQ 191
                AS+ ++  I                    QQ+ GM    P          +S   
Sbjct: 123 SSSAPASSSSSLPI------------------SGQQRGGMAIGVP----------ASPIP 182

Query: 192 QQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLLASSKQKAGLV 251
                  Q  P+                           A P +   Q     +   G+ 
Sbjct: 183 SPSPTPSQHSPS---------------------------AFPGSFGQQYGGLGRGTVGMS 242

Query: 252 QSQFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQIRQQLSQQSS 311
           ++   +S+   + +QG Q +GMMG++   SQ+R +G+     QQR  Q  +R   +  +S
Sbjct: 243 EATSNTSSPQVRMMQGTQGIGMMGTLGSGSQIRPSGMTQH--QQRPTQSSLRP--ASSTS 302

Query: 312 LTSPQVQN-----LPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQ--QQQWLKQMPSMSTP 371
             SP  QN     L R S ++  N Q T  +        Q SLQ   Q WL   P    P
Sbjct: 303 TQSPVAQNFQGHSLMRPSPISSPNVQSTGAS--------QQSLQAINQPWLSSTPQGKPP 362

Query: 372 -GSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQQQQQ 431
              PS+R Q                   NS S+  QQ P + QQ  S             
Sbjct: 363 LPPPSYRPQ------------------VNSPSM--QQRPHIPQQHIS--------TSAAT 422

Query: 432 PQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLSLTG 491
           PQ QQQQSQQQ Q      Q+QL Q  SPQ   QP+ H HQ    R+ GL  QK  S   
Sbjct: 423 PQPQQQQSQQQHQ-----PQEQLQQLRSPQ---QPLAHPHQ--PTRVQGLVNQKVTSPVM 482

Query: 492 SHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEMADE 551
                 A   +     S++   +  ++LGKR I +L+ Q+DP  KL+PEVED+L ++A++
Sbjct: 483 PSQPPVAQPGNHAKTVSAETEPSDDRILGKRSIHELLQQIDPSEKLDPEVEDILSDIAED 498

Query: 552 FIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSDVHK 604
           F++S+ TF C+LAKHRKS  LE+KD+LLH+E+NW +  PG+SSDE+K   K L ++D+HK
Sbjct: 543 FVESITTFGCSLAKHRKSDILEAKDILLHVERNWNIRPPGFSSDEFKTFRKPL-TTDIHK 498

[Close]

BLAST of Lsi02G029040 vs. ExPASy TrEMBL
Match: A0A5A7UU03 (Transcription initiation factor TFIID subunit 12b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001210 PE=3 SV=1)

HSP 1 Score: 1065.4 bits (2754), Expect = 9.2e-308
Identity = 624/673 (92.72%), Postives = 637/673 (94.65%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSAL Q
Sbjct: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALVQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQHS 120
           SPSIDHLH L+QISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKP+QQQQQQQQQQQQ  
Sbjct: 61  SPSIDHLHPLAQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPIQQQQQQQQQQQQQQ 120

Query: 121 QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP----QQQQQFGMMRQQPGLYGQMH 180
           QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP    QQQQQFGMMRQ   LY QM+
Sbjct: 121 QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQQQQFGMMRQPSALYSQMN 180

Query: 181 FGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLLAS 240
           FG +STN  QQQQQQQQQPNQQQQ+GTGNLSRS LIGQGNHLPMLSGAA +NL SQLLAS
Sbjct: 181 FGGASTN--QQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSGAAQYNLPSQLLAS 240

Query: 241 SKQKAGLVQS-QFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQI 300
           SKQKAGLVQ  QFQSSNSHGQALQGIQAMGMMGSMNL SQLRANGLAS YAQQRINQGQI
Sbjct: 241 SKQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYAQQRINQGQI 300

Query: 301 RQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMS 360
           RQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMS
Sbjct: 301 RQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMS 360

Query: 361 TPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLH----- 420
           TPGSPSFRLQ++QQVLL QQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLH     
Sbjct: 361 TPGSPSFRLQRQQQVLLHQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQHQQ 420

Query: 421 --QQQQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAG 480
             QQQQQQPQSQQQ  QQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAG
Sbjct: 421 QQQQQQQQPQSQQQPPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAG 480

Query: 481 QKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVED 540
           QKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVED
Sbjct: 481 QKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVED 540

Query: 541 LLLEMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKN 600
           LLLE+AD+FIDSV TFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKN
Sbjct: 541 LLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKN 600

Query: 601 LSSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRPSPSSEQLLSQ 660
           LSSSDVHKKRLDMIR+LKEAS VETNVNSPKEMVRQGVGMS+G NTLTRPSPSSEQLLSQ
Sbjct: 601 LSSSDVHKKRLDMIRLLKEASCVETNVNSPKEMVRQGVGMSIGPNTLTRPSPSSEQLLSQ 660

Query: 661 TAGSQLLQQMTRF 662
           T+GSQLLQQM RF
Sbjct: 661 TSGSQLLQQMMRF 671

[Close]

BLAST of Lsi02G029040 vs. ExPASy TrEMBL
Match: A0A1S3CI72 (transcription initiation factor TFIID subunit 12b OS=Cucumis melo OX=3656 GN=LOC103500697 PE=3 SV=1)

HSP 1 Score: 1053.1 bits (2722), Expect = 4.7e-304
Identity = 625/677 (92.32%), Postives = 638/677 (94.24%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSAL Q
Sbjct: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALVQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQN--QQQQQQLSPAVGLDYQQKPL-QQQQQQQQQQQ 120
           SPSIDHLH L+QISSPPLSHISLPQN  QQQQQQLSPAVGLDYQQKP+ QQQQQQQQQQQ
Sbjct: 61  SPSIDHLHPLAQISSPPLSHISLPQNQQQQQQQQLSPAVGLDYQQKPIQQQQQQQQQQQQ 120

Query: 121 QHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP----QQQQQFGMMRQQPGLYG 180
           Q  QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP    QQQQQFGMMRQ   LY 
Sbjct: 121 QQQQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQQQQFGMMRQPSALYS 180

Query: 181 QMHFGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQL 240
           QM+FG +STN  QQQQQQQQQPNQQQQ+GTGNLSRS LIGQGNHLPMLSGAA +NL SQL
Sbjct: 181 QMNFGGASTN--QQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSGAAQYNLPSQL 240

Query: 241 LASSKQKAGLVQS-QFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQ 300
           LASSKQKAGLVQ  QFQSSNSHGQALQGIQAMGMMGSMNL SQLRANGLAS YAQQRINQ
Sbjct: 241 LASSKQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYAQQRINQ 300

Query: 301 GQIRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMP 360
           GQIRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMP
Sbjct: 301 GQIRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMP 360

Query: 361 SMSTPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLH-- 420
           SMSTPGSPSFRLQ++QQVLL QQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLH  
Sbjct: 361 SMSTPGSPSFRLQRQQQVLLHQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQ 420

Query: 421 --QQQQQQPQSQ----QQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIA 480
             QQQQQQPQSQ    QQQ QQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIA
Sbjct: 421 QQQQQQQQPQSQQQPPQQQLQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIA 480

Query: 481 GLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEP 540
           GLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEP
Sbjct: 481 GLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEP 540

Query: 541 EVEDLLLEMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKN 600
           EVEDLLLE+AD+FIDSV TFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKN
Sbjct: 541 EVEDLLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKN 600

Query: 601 HNKNLSSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRPSPSSEQ 660
           HNKNLSSSDVHKKRLDMIR+LKEAS VETN+NSPKEMVRQGVGMS+G NTLTRPSPSSEQ
Sbjct: 601 HNKNLSSSDVHKKRLDMIRLLKEASCVETNLNSPKEMVRQGVGMSIGPNTLTRPSPSSEQ 660

Query: 661 LLSQTAGSQLLQQMTRF 662
           LLSQTAGSQLLQQM RF
Sbjct: 661 LLSQTAGSQLLQQMMRF 675

[Close]

BLAST of Lsi02G029040 vs. ExPASy TrEMBL
Match: A0A0A0K7T6 (TFIID_20kDa domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450520 PE=3 SV=1)

HSP 1 Score: 1040.0 bits (2688), Expect = 4.2e-300
Identity = 619/683 (90.63%), Postives = 633/683 (92.68%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSAL Q
Sbjct: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALVQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQ--QQQLSPAVGLDYQQKPLQQQQQQQQQQQQ 120
           SPSIDHLH L+QISSPPLSHISLPQNQQQ  QQQLSPAVGLDYQQKP+QQQQQQQQQQQQ
Sbjct: 61  SPSIDHLHPLAQISSPPLSHISLPQNQQQQPQQQLSPAVGLDYQQKPIQQQQQQQQQQQQ 120

Query: 121 HSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP----QQQQQFGMMRQQPGLYGQ 180
             QQLVQQPQNASAMTNFQIQQALQRSPS+SRLNQMQP    QQQQQFGMMRQQ GLY Q
Sbjct: 121 QQQQLVQQPQNASAMTNFQIQQALQRSPSISRLNQMQPQQQQQQQQQFGMMRQQSGLYSQ 180

Query: 181 MHFGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLL 240
           M+FG +STN  QQQQQQQQQPNQQQQ+GTGNLSRS LIGQGNHLPMLSGAA +NL SQLL
Sbjct: 181 MNFGGASTN--QQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSGAAQYNLPSQLL 240

Query: 241 ASSKQKAGLVQS-QFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQG 300
           ASSKQKAGLVQ  QFQSSNSHGQALQGIQAMGMMGSMNL SQLRANGLAS YAQQRINQG
Sbjct: 241 ASSKQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYAQQRINQG 300

Query: 301 QIRQQLSQQSSLTS------------PQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNS 360
           QIRQQLSQQ  + +              VQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNS
Sbjct: 301 QIRQQLSQQRQVNALFGYFGHCLDIFYAVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNS 360

Query: 361 LQQQQWLKQMPSMSTPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQ 420
           LQQQQWLKQMPSMS PGSPSFRL QRQQVLL QQLASS+QLHQNSMSLNPQQFPQ+VQQQ
Sbjct: 361 LQQQQWLKQMPSMSNPGSPSFRL-QRQQVLLHQQLASSNQLHQNSMSLNPQQFPQIVQQQ 420

Query: 421 SSMGHQQL---HQQQQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQ 480
           SSMGHQQL   HQQQQQQPQSQQQQ QQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQ
Sbjct: 421 SSMGHQQLHQQHQQQQQQPQSQQQQPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQ 480

Query: 481 HSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDP 540
           HSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDP
Sbjct: 481 HSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDP 540

Query: 541 HGKLEPEVEDLLLEMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYS 600
           HGKLEPEVEDLLLE+AD+FIDSV TFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYS
Sbjct: 541 HGKLEPEVEDLLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYS 600

Query: 601 SDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRP 660
           SDEWKNHNKNLSSSDVHKKRLDMIRILKEAS VETNVNSPKEMVRQGVGMS+G NTLTRP
Sbjct: 601 SDEWKNHNKNLSSSDVHKKRLDMIRILKEASCVETNVNSPKEMVRQGVGMSIGPNTLTRP 660

Query: 661 SPSSEQLLSQTAGSQLLQQMTRF 662
           SPSSEQLLSQTAGSQLLQQM RF
Sbjct: 661 SPSSEQLLSQTAGSQLLQQMMRF 680

[Close]

BLAST of Lsi02G029040 vs. ExPASy TrEMBL
Match: A0A6J1GNP4 (transcription initiation factor TFIID subunit 12b-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456092 PE=3 SV=1)

HSP 1 Score: 1024.6 bits (2648), Expect = 1.8e-295
Identity = 611/672 (90.92%), Postives = 628/672 (93.45%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQ NPMDPSPPPPQ QPQVQPSTTA+PQNSSNPSNSSVNPPIPSPSAL Q
Sbjct: 1   MADSTSSPRPVQTNPMDPSPPPPQHQPQVQPSTTAVPQNSSNPSNSSVNPPIPSPSALVQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQHS 120
           SPSIDHLH LSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQHS
Sbjct: 61  SPSIDHLHPLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQHS 120

Query: 121 QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP--QQQQQFGMMRQQPGLYGQMHFG 180
           QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP  QQQQQFGMMRQQ  LY QM+FG
Sbjct: 121 QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQQFGMMRQQSALYSQMNFG 180

Query: 181 ASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSG---AAPFNLQSQLLA 240
           ASSTN      QQQQQPNQQQQIGTGNLSRSALIGQG+HLPMLSG   AA +NLQSQLLA
Sbjct: 181 ASSTN------QQQQQPNQQQQIGTGNLSRSALIGQGSHLPMLSGAAAAAQYNLQSQLLA 240

Query: 241 SSKQKAGLVQ-SQFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ 300
           SSKQKAGLVQ +QFQS NSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ
Sbjct: 241 SSKQKAGLVQGAQFQSGNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ 300

Query: 301 IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM 360
           IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQ  M+QNSLQQQQWLKQ+PSM
Sbjct: 301 IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQSNMIQNSLQQQQWLKQIPSM 360

Query: 361 STPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQ-- 420
           STPGSPS+RLQQRQQVLLQQQLASS+QLHQN MSLN QQFPQLVQQQ SMGHQQ  QQ  
Sbjct: 361 STPGSPSYRLQQRQQVLLQQQLASSNQLHQNPMSLNSQQFPQLVQQQPSMGHQQQQQQPQ 420

Query: 421 -QQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVL--HQHQQHSPRIAGLAGQ 480
            QQQQPQ QQQ  QQQLQQQ LHQQQQLLQQ SPQ SLQPVL  HQHQQHSPRIAGL GQ
Sbjct: 421 AQQQQPQ-QQQLQQQQLQQQTLHQQQQLLQQPSPQNSLQPVLHQHQHQQHSPRIAGLVGQ 480

Query: 481 KSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDL 540
           KSLSLTGSHPDATASG STPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDL
Sbjct: 481 KSLSLTGSHPDATASGTSTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDL 540

Query: 541 LLEMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNL 600
           LLE+AD+FIDSV TFSCNLAKHRKSSTLESKDLLLHLEKNWQLN+PGYSSDE KN NK+L
Sbjct: 541 LLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNIPGYSSDERKNQNKSL 600

Query: 601 SSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRPSPSSEQLLSQT 660
           SSSDVHKKRLDMIRILKEASRVETN+N+PKEMVRQGVG+S+GTNTLTRPSPSSEQLLSQT
Sbjct: 601 SSSDVHKKRLDMIRILKEASRVETNMNTPKEMVRQGVGISIGTNTLTRPSPSSEQLLSQT 660

Query: 661 AGSQLLQQMTRF 662
           AGSQLLQQMTRF
Sbjct: 661 AGSQLLQQMTRF 665

[Close]

BLAST of Lsi02G029040 vs. ExPASy TrEMBL
Match: A0A6J1GNS6 (transcription initiation factor TFIID subunit 12b-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456092 PE=3 SV=1)

HSP 1 Score: 1019.2 bits (2634), Expect = 7.6e-294
Identity = 610/672 (90.77%), Postives = 627/672 (93.30%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQ NPMDPSPPPPQ QPQVQPSTTA+PQNSSNPSNSSVNPPIPSPSAL Q
Sbjct: 1   MADSTSSPRPVQTNPMDPSPPPPQHQPQVQPSTTAVPQNSSNPSNSSVNPPIPSPSALVQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQHS 120
           SPSIDHLH LSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPL QQQQQQQQQQQHS
Sbjct: 61  SPSIDHLHPLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPL-QQQQQQQQQQQHS 120

Query: 121 QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP--QQQQQFGMMRQQPGLYGQMHFG 180
           QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP  QQQQQFGMMRQQ  LY QM+FG
Sbjct: 121 QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQQFGMMRQQSALYSQMNFG 180

Query: 181 ASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSG---AAPFNLQSQLLA 240
           ASSTN      QQQQQPNQQQQIGTGNLSRSALIGQG+HLPMLSG   AA +NLQSQLLA
Sbjct: 181 ASSTN------QQQQQPNQQQQIGTGNLSRSALIGQGSHLPMLSGAAAAAQYNLQSQLLA 240

Query: 241 SSKQKAGLVQ-SQFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ 300
           SSKQKAGLVQ +QFQS NSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ
Sbjct: 241 SSKQKAGLVQGAQFQSGNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ 300

Query: 301 IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM 360
           IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQ  M+QNSLQQQQWLKQ+PSM
Sbjct: 301 IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQSNMIQNSLQQQQWLKQIPSM 360

Query: 361 STPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQ-- 420
           STPGSPS+RLQQRQQVLLQQQLASS+QLHQN MSLN QQFPQLVQQQ SMGHQQ  QQ  
Sbjct: 361 STPGSPSYRLQQRQQVLLQQQLASSNQLHQNPMSLNSQQFPQLVQQQPSMGHQQQQQQPQ 420

Query: 421 -QQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVL--HQHQQHSPRIAGLAGQ 480
            QQQQPQ QQQ  QQQLQQQ LHQQQQLLQQ SPQ SLQPVL  HQHQQHSPRIAGL GQ
Sbjct: 421 AQQQQPQ-QQQLQQQQLQQQTLHQQQQLLQQPSPQNSLQPVLHQHQHQQHSPRIAGLVGQ 480

Query: 481 KSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDL 540
           KSLSLTGSHPDATASG STPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDL
Sbjct: 481 KSLSLTGSHPDATASGTSTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDL 540

Query: 541 LLEMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNL 600
           LLE+AD+FIDSV TFSCNLAKHRKSSTLESKDLLLHLEKNWQLN+PGYSSDE KN NK+L
Sbjct: 541 LLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNIPGYSSDERKNQNKSL 600

Query: 601 SSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRPSPSSEQLLSQT 660
           SSSDVHKKRLDMIRILKEASRVETN+N+PKEMVRQGVG+S+GTNTLTRPSPSSEQLLSQT
Sbjct: 601 SSSDVHKKRLDMIRILKEASRVETNMNTPKEMVRQGVGISIGTNTLTRPSPSSEQLLSQT 660

Query: 661 AGSQLLQQMTRF 662
           AGSQLLQQMTRF
Sbjct: 661 AGSQLLQQMTRF 664

[Close]

BLAST of Lsi02G029040 vs. NCBI nr
Match: XP_038897213.1 (transcription initiation factor TFIID subunit 12b isoform X3 [Benincasa hispida])

HSP 1 Score: 1080.1 bits (2792), Expect = 0.0e+00
Identity = 633/670 (94.48%), Postives = 643/670 (95.97%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ
Sbjct: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPL----QQQQQQQQQQ 120
           SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPL    QQQQQQQQQQ
Sbjct: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQQQ 120

Query: 121 QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP-QQQQQFGMMRQQPGLYGQM 180
           QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP QQQQQFGMMRQQ  LYGQM
Sbjct: 121 QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQFGMMRQQSALYGQM 180

Query: 181 HFGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLLA 240
           +FG  STN   QQQQQQQQPNQQQQ+GTGNLSRSALIGQGNHLPMLSG A +NLQSQLLA
Sbjct: 181 NFGGPSTN---QQQQQQQQPNQQQQMGTGNLSRSALIGQGNHLPMLSGTAQYNLQSQLLA 240

Query: 241 SSKQKAGLVQS-QFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ 300
           SSKQKAGLVQ  QFQSSNSHGQALQGIQAMGM+GSMNLTSQLRANGLASSY QQRINQGQ
Sbjct: 241 SSKQKAGLVQGPQFQSSNSHGQALQGIQAMGMIGSMNLTSQLRANGLASSYTQQRINQGQ 300

Query: 301 IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM 360
           IRQQLSQQSSLTSPQVQNLPRM+NLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM
Sbjct: 301 IRQQLSQQSSLTSPQVQNLPRMANLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM 360

Query: 361 STPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQL---HQ 420
           STPGSPSFRLQQRQQ LLQQQLASSSQLH N+MSLNPQQFPQLVQQQSSMGHQQL   HQ
Sbjct: 361 STPGSPSFRLQQRQQALLQQQLASSSQLHPNNMSLNPQQFPQLVQQQSSMGHQQLHQQHQ 420

Query: 421 QQQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKS 480
           QQQQQPQSQQQQ QQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIA LAGQKS
Sbjct: 421 QQQQQPQSQQQQPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAALAGQKS 480

Query: 481 LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL 540
           LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL
Sbjct: 481 LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL 540

Query: 541 EMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSS 600
           E+AD+FIDSV TFS NLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSS
Sbjct: 541 EIADDFIDSVTTFSSNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSS 600

Query: 601 SDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRPSPSSEQLLSQTAG 660
           SDVHKKRLDMIRILKEASRVETN+NSPKEMVRQGVGMS+GTNTLTRPSPSSEQLLSQTAG
Sbjct: 601 SDVHKKRLDMIRILKEASRVETNINSPKEMVRQGVGMSIGTNTLTRPSPSSEQLLSQTAG 660

Query: 661 SQLLQQMTRF 662
           SQLLQQM RF
Sbjct: 661 SQLLQQMMRF 667

[Close]

BLAST of Lsi02G029040 vs. NCBI nr
Match: XP_038897210.1 (transcription initiation factor TFIID subunit 12b isoform X1 [Benincasa hispida])

HSP 1 Score: 1070.5 bits (2767), Expect = 6.1e-309
Identity = 633/684 (92.54%), Postives = 643/684 (94.01%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ
Sbjct: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPL----QQQQQQQQQQ 120
           SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPL    QQQQQQQQQQ
Sbjct: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQQQ 120

Query: 121 QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP-QQQQQFGMMRQQPGLYGQM 180
           QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP QQQQQFGMMRQQ  LYGQM
Sbjct: 121 QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQFGMMRQQSALYGQM 180

Query: 181 HFGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLLA 240
           +FG  STN   QQQQQQQQPNQQQQ+GTGNLSRSALIGQGNHLPMLSG A +NLQSQLLA
Sbjct: 181 NFGGPSTN---QQQQQQQQPNQQQQMGTGNLSRSALIGQGNHLPMLSGTAQYNLQSQLLA 240

Query: 241 SSKQKAGLVQS-QFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ 300
           SSKQKAGLVQ  QFQSSNSHGQALQGIQAMGM+GSMNLTSQLRANGLASSY QQRINQGQ
Sbjct: 241 SSKQKAGLVQGPQFQSSNSHGQALQGIQAMGMIGSMNLTSQLRANGLASSYTQQRINQGQ 300

Query: 301 IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM 360
           IRQQLSQQSSLTSPQVQNLPRM+NLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM
Sbjct: 301 IRQQLSQQSSLTSPQVQNLPRMANLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM 360

Query: 361 STPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQL---HQ 420
           STPGSPSFRLQQRQQ LLQQQLASSSQLH N+MSLNPQQFPQLVQQQSSMGHQQL   HQ
Sbjct: 361 STPGSPSFRLQQRQQALLQQQLASSSQLHPNNMSLNPQQFPQLVQQQSSMGHQQLHQQHQ 420

Query: 421 QQQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKS 480
           QQQQQPQSQQQQ QQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIA LAGQKS
Sbjct: 421 QQQQQPQSQQQQPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAALAGQKS 480

Query: 481 LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL 540
           LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL
Sbjct: 481 LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL 540

Query: 541 EMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHL--------------EKNWQLNVPGY 600
           E+AD+FIDSV TFS NLAKHRKSSTLESKDLLLHL              EKNWQLNVPGY
Sbjct: 541 EIADDFIDSVTTFSSNLAKHRKSSTLESKDLLLHLVLDKALPIINCGRAEKNWQLNVPGY 600

Query: 601 SSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTR 660
           SSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETN+NSPKEMVRQGVGMS+GTNTLTR
Sbjct: 601 SSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNINSPKEMVRQGVGMSIGTNTLTR 660

Query: 661 PSPSSEQLLSQTAGSQLLQQMTRF 662
           PSPSSEQLLSQTAGSQLLQQM RF
Sbjct: 661 PSPSSEQLLSQTAGSQLLQQMMRF 681

[Close]

BLAST of Lsi02G029040 vs. NCBI nr
Match: KAA0059403.1 (transcription initiation factor TFIID subunit 12b [Cucumis melo var. makuwa] >TYK03924.1 transcription initiation factor TFIID subunit 12b [Cucumis melo var. makuwa])

HSP 1 Score: 1065.4 bits (2754), Expect = 1.9e-307
Identity = 624/673 (92.72%), Postives = 637/673 (94.65%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSAL Q
Sbjct: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALVQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQHS 120
           SPSIDHLH L+QISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKP+QQQQQQQQQQQQ  
Sbjct: 61  SPSIDHLHPLAQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPIQQQQQQQQQQQQQQ 120

Query: 121 QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP----QQQQQFGMMRQQPGLYGQMH 180
           QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP    QQQQQFGMMRQ   LY QM+
Sbjct: 121 QQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQQQQFGMMRQPSALYSQMN 180

Query: 181 FGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLLAS 240
           FG +STN  QQQQQQQQQPNQQQQ+GTGNLSRS LIGQGNHLPMLSGAA +NL SQLLAS
Sbjct: 181 FGGASTN--QQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSGAAQYNLPSQLLAS 240

Query: 241 SKQKAGLVQS-QFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQI 300
           SKQKAGLVQ  QFQSSNSHGQALQGIQAMGMMGSMNL SQLRANGLAS YAQQRINQGQI
Sbjct: 241 SKQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYAQQRINQGQI 300

Query: 301 RQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMS 360
           RQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMS
Sbjct: 301 RQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMS 360

Query: 361 TPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLH----- 420
           TPGSPSFRLQ++QQVLL QQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLH     
Sbjct: 361 TPGSPSFRLQRQQQVLLHQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQHQQ 420

Query: 421 --QQQQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAG 480
             QQQQQQPQSQQQ  QQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAG
Sbjct: 421 QQQQQQQQPQSQQQPPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAG 480

Query: 481 QKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVED 540
           QKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVED
Sbjct: 481 QKSLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVED 540

Query: 541 LLLEMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKN 600
           LLLE+AD+FIDSV TFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKN
Sbjct: 541 LLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKN 600

Query: 601 LSSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRPSPSSEQLLSQ 660
           LSSSDVHKKRLDMIR+LKEAS VETNVNSPKEMVRQGVGMS+G NTLTRPSPSSEQLLSQ
Sbjct: 601 LSSSDVHKKRLDMIRLLKEASCVETNVNSPKEMVRQGVGMSIGPNTLTRPSPSSEQLLSQ 660

Query: 661 TAGSQLLQQMTRF 662
           T+GSQLLQQM RF
Sbjct: 661 TSGSQLLQQMMRF 671

[Close]

BLAST of Lsi02G029040 vs. NCBI nr
Match: XP_011659626.1 (transcription initiation factor TFIID subunit 12b isoform X1 [Cucumis sativus] >KAE8646505.1 hypothetical protein Csa_016743 [Cucumis sativus])

HSP 1 Score: 1062.8 bits (2747), Expect = 1.2e-306
Identity = 626/671 (93.29%), Postives = 638/671 (95.08%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSAL Q
Sbjct: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALVQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQ--QQQLSPAVGLDYQQKPLQQQQQQQQQQQQ 120
           SPSIDHLH L+QISSPPLSHISLPQNQQQ  QQQLSPAVGLDYQQKP+QQQQQQQQQQQQ
Sbjct: 61  SPSIDHLHPLAQISSPPLSHISLPQNQQQQPQQQLSPAVGLDYQQKPIQQQQQQQQQQQQ 120

Query: 121 HSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP----QQQQQFGMMRQQPGLYGQ 180
             QQLVQQPQNASAMTNFQIQQALQRSPS+SRLNQMQP    QQQQQFGMMRQQ GLY Q
Sbjct: 121 QQQQLVQQPQNASAMTNFQIQQALQRSPSISRLNQMQPQQQQQQQQQFGMMRQQSGLYSQ 180

Query: 181 MHFGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLL 240
           M+FG +STN  QQQQQQQQQPNQQQQ+GTGNLSRS LIGQGNHLPMLSGAA +NL SQLL
Sbjct: 181 MNFGGASTN--QQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSGAAQYNLPSQLL 240

Query: 241 ASSKQKAGLVQS-QFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQG 300
           ASSKQKAGLVQ  QFQSSNSHGQALQGIQAMGMMGSMNL SQLRANGLAS YAQQRINQG
Sbjct: 241 ASSKQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYAQQRINQG 300

Query: 301 QIRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPS 360
           QIRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPS
Sbjct: 301 QIRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPS 360

Query: 361 MSTPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQL---H 420
           MS PGSPSFRL QRQQVLL QQLASS+QLHQNSMSLNPQQFPQ+VQQQSSMGHQQL   H
Sbjct: 361 MSNPGSPSFRL-QRQQVLLHQQLASSNQLHQNSMSLNPQQFPQIVQQQSSMGHQQLHQQH 420

Query: 421 QQQQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQK 480
           QQQQQQPQSQQQQ QQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQK
Sbjct: 421 QQQQQQPQSQQQQPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQK 480

Query: 481 SLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLL 540
           SLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLL
Sbjct: 481 SLSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLL 540

Query: 541 LEMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLS 600
           LE+AD+FIDSV TFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLS
Sbjct: 541 LEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLS 600

Query: 601 SSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTRPSPSSEQLLSQTA 660
           SSDVHKKRLDMIRILKEAS VETNVNSPKEMVRQGVGMS+G NTLTRPSPSSEQLLSQTA
Sbjct: 601 SSDVHKKRLDMIRILKEASCVETNVNSPKEMVRQGVGMSIGPNTLTRPSPSSEQLLSQTA 660

Query: 661 GSQLLQQMTRF 662
           GSQLLQQM RF
Sbjct: 661 GSQLLQQMMRF 668

[Close]

BLAST of Lsi02G029040 vs. NCBI nr
Match: XP_038897212.1 (transcription initiation factor TFIID subunit 12b isoform X2 [Benincasa hispida])

HSP 1 Score: 1060.4 bits (2741), Expect = 6.1e-306
Identity = 630/684 (92.11%), Postives = 640/684 (93.57%), Query Frame = 0


Query: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60
           MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ
Sbjct: 1   MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALAQ 60

Query: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPL----QQQQQQQQQQ 120
           SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPL    QQQQQQQQQQ
Sbjct: 61  SPSIDHLHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQQQ 120

Query: 121 QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP-QQQQQFGMMRQQPGLYGQM 180
           QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQP QQQQQFGMMRQQ  LYGQM
Sbjct: 121 QQHSQQLVQQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQQFGMMRQQSALYGQM 180

Query: 181 HFGASSTNQQQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLLA 240
           +FG  STN   QQQQQQQQPNQQQQ+GTGNLSRSALIGQGNHLPMLSG A +NLQSQLLA
Sbjct: 181 NFGGPSTN---QQQQQQQQPNQQQQMGTGNLSRSALIGQGNHLPMLSGTAQYNLQSQLLA 240

Query: 241 SSKQKAGLVQS-QFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQ 300
           S   KAGLVQ  QFQSSNSHGQALQGIQAMGM+GSMNLTSQLRANGLASSY QQRINQGQ
Sbjct: 241 S---KAGLVQGPQFQSSNSHGQALQGIQAMGMIGSMNLTSQLRANGLASSYTQQRINQGQ 300

Query: 301 IRQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM 360
           IRQQLSQQSSLTSPQVQNLPRM+NLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM
Sbjct: 301 IRQQLSQQSSLTSPQVQNLPRMANLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSM 360

Query: 361 STPGSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQL---HQ 420
           STPGSPSFRLQQRQQ LLQQQLASSSQLH N+MSLNPQQFPQLVQQQSSMGHQQL   HQ
Sbjct: 361 STPGSPSFRLQQRQQALLQQQLASSSQLHPNNMSLNPQQFPQLVQQQSSMGHQQLHQQHQ 420

Query: 421 QQQQQPQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKS 480
           QQQQQPQSQQQQ QQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIA LAGQKS
Sbjct: 421 QQQQQPQSQQQQPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAALAGQKS 480

Query: 481 LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL 540
           LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL
Sbjct: 481 LSLTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLL 540

Query: 541 EMADEFIDSVVTFSCNLAKHRKSSTLESKDLLLHL--------------EKNWQLNVPGY 600
           E+AD+FIDSV TFS NLAKHRKSSTLESKDLLLHL              EKNWQLNVPGY
Sbjct: 541 EIADDFIDSVTTFSSNLAKHRKSSTLESKDLLLHLVLDKALPIINCGRAEKNWQLNVPGY 600

Query: 601 SSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMSVGTNTLTR 660
           SSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETN+NSPKEMVRQGVGMS+GTNTLTR
Sbjct: 601 SSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNINSPKEMVRQGVGMSIGTNTLTR 660

Query: 661 PSPSSEQLLSQTAGSQLLQQMTRF 662
           PSPSSEQLLSQTAGSQLLQQM RF
Sbjct: 661 PSPSSEQLLSQTAGSQLLQQMMRF 678

[Close]

BLAST of Lsi02G029040 vs. TAIR 10
Match: AT1G17440.1 (Transcription initiation factor TFIID subunit A )

HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-132
Identity = 378/705 (53.62%), Postives = 461/705 (65.39%), Query Frame = 0


Query: 4   STSSPRPVQ-PNPMDPSP----PPPQQQPQVQPSTTAIPQNSSNPSNS------------ 63
           S+ SP+ +Q PNPM+PSP    P P    Q Q   TA   NS N + S            
Sbjct: 8   SSLSPKSLQSPNPMEPSPASSTPLPSSSSQQQQLMTAPISNSVNSAASPAMTVTTTEGIV 67

Query: 64  ---SVNPPIPSPSALAQSPSIDHLHSLSQISSP-PLSHISLPQNQQQQQQLSPAVGLDYQ 123
              +  P I SP+  + +P I      +QI SP PLSH S   +QQ Q Q    +    Q
Sbjct: 68  IQNNSQPNISSPNPTSSNPPIG-----AQIPSPSPLSHPSSSLDQQTQTQ---QLVQQTQ 127

Query: 124 QKPLQQQQQQQQ-------QQQQHSQQLVQQPQNAS---AMTNFQIQQALQRSPSMSRLN 183
           Q P QQQQ  QQ       Q     QQ++QQ    S    M+++QI Q+LQRSPS+SRL+
Sbjct: 128 QLPQQQQQIMQQISSSPIPQLSPQQQQILQQQHMTSQQIPMSSYQIAQSLQRSPSLSRLS 187

Query: 184 QMQPQQQQQF-----GMMRQQPGLYGQMHFGASSTNQQQQQQQQQQQPNQQQQIGTGNLS 243
           Q+Q QQQQQ       ++RQQ GLYG M+FG S + QQ QQ QQ   P         N+S
Sbjct: 188 QIQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQNQQMVNP---------NMS 247

Query: 244 RSALIGQGNHLPML---SGAAPFNLQSQLLASS-KQKAGLVQSQFQSSNSHGQALQGIQA 303
           R+ L+GQ  HLPML   +GAA  N+Q QLLA+S +QK+G+VQ       S GQ LQG+QA
Sbjct: 248 RAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPGSSGQQLQGMQA 307

Query: 304 MGMMGSMNLTSQLRANGLASSYAQQRINQGQIRQQLSQQSSLTSPQVQNLPRMSNLAFMN 363
           MGMMGS+NLTSQ+R N   + YAQQRIN GQ+RQQLSQQ++LTSPQVQNL R S+LAFMN
Sbjct: 308 MGMMGSLNLTSQMRGN--PALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMN 367

Query: 364 QQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMSTPGSPSFRLQ--QRQQVLL-----QQQL 423
            QL+ LAQNGQ  MMQNSL QQQWLKQM  +++P   SFRLQ  QRQ +LL     QQQ 
Sbjct: 368 PQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPN--SFRLQPSQRQALLLQQQQQQQQQ 427

Query: 424 ASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQQQQQPQSQQQQSQQQLQQQPLHQQ 483
            SS QLHQ+SMSLN QQ  Q++QQQ         Q  Q   Q Q QQ QQQLQQQP   Q
Sbjct: 428 LSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQP---Q 487

Query: 484 QQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQG 543
           QQ+ QQ   QQ +Q      QQ SPR+   AGQKS+SLTGS P+AT SG +TPGGSSSQG
Sbjct: 488 QQMQQQQQQQQQMQ---INQQQPSPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQG 547

Query: 544 TEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEMADEFIDSVVTFSCNLAKHRKSST 603
           TEA  Q+LGKRKIQDLVSQVD H KL+P+VEDLLLE+AD+FIDSV +F+C+LAKHRKSS 
Sbjct: 548 TEATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSV 607

Query: 604 LESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNVN 662
           LE KD+LLHLEKN  L +PG+SS++ K   K +  +D+HKKRL M+R L E+S+ ETN +
Sbjct: 608 LEPKDILLHLEKNLHLTIPGFSSED-KRQTKTV-PTDLHKKRLAMVRALLESSKPETNAS 667

[Close]

BLAST of Lsi02G029040 vs. TAIR 10
Match: AT1G17440.2 (Transcription initiation factor TFIID subunit A )

HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-132
Identity = 378/705 (53.62%), Postives = 461/705 (65.39%), Query Frame = 0


Query: 4   STSSPRPVQ-PNPMDPSP----PPPQQQPQVQPSTTAIPQNSSNPSNS------------ 63
           S+ SP+ +Q PNPM+PSP    P P    Q Q   TA   NS N + S            
Sbjct: 8   SSLSPKSLQSPNPMEPSPASSTPLPSSSSQQQQLMTAPISNSVNSAASPAMTVTTTEGIV 67

Query: 64  ---SVNPPIPSPSALAQSPSIDHLHSLSQISSP-PLSHISLPQNQQQQQQLSPAVGLDYQ 123
              +  P I SP+  + +P I      +QI SP PLSH S   +QQ Q Q    +    Q
Sbjct: 68  IQNNSQPNISSPNPTSSNPPIG-----AQIPSPSPLSHPSSSLDQQTQTQ---QLVQQTQ 127

Query: 124 QKPLQQQQQQQQ-------QQQQHSQQLVQQPQNAS---AMTNFQIQQALQRSPSMSRLN 183
           Q P QQQQ  QQ       Q     QQ++QQ    S    M+++QI Q+LQRSPS+SRL+
Sbjct: 128 QLPQQQQQIMQQISSSPIPQLSPQQQQILQQQHMTSQQIPMSSYQIAQSLQRSPSLSRLS 187

Query: 184 QMQPQQQQQF-----GMMRQQPGLYGQMHFGASSTNQQQQQQQQQQQPNQQQQIGTGNLS 243
           Q+Q QQQQQ       ++RQQ GLYG M+FG S + QQ QQ QQ   P         N+S
Sbjct: 188 QIQQQQQQQHQGQYGNVLRQQAGLYGTMNFGGSGSVQQSQQNQQMVNP---------NMS 247

Query: 244 RSALIGQGNHLPML---SGAAPFNLQSQLLASS-KQKAGLVQSQFQSSNSHGQALQGIQA 303
           R+ L+GQ  HLPML   +GAA  N+Q QLLA+S +QK+G+VQ       S GQ LQG+QA
Sbjct: 248 RAGLVGQSGHLPMLNGAAGAAQMNIQPQLLAASPRQKSGMVQGSQFHPGSSGQQLQGMQA 307

Query: 304 MGMMGSMNLTSQLRANGLASSYAQQRINQGQIRQQLSQQSSLTSPQVQNLPRMSNLAFMN 363
           MGMMGS+NLTSQ+R N   + YAQQRIN GQ+RQQLSQQ++LTSPQVQNL R S+LAFMN
Sbjct: 308 MGMMGSLNLTSQMRGN--PALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMN 367

Query: 364 QQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMSTPGSPSFRLQ--QRQQVLL-----QQQL 423
            QL+ LAQNGQ  MMQNSL QQQWLKQM  +++P   SFRLQ  QRQ +LL     QQQ 
Sbjct: 368 PQLSGLAQNGQAGMMQNSLSQQQWLKQMSGITSPN--SFRLQPSQRQALLLQQQQQQQQQ 427

Query: 424 ASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQQQQQPQSQQQQSQQQLQQQPLHQQ 483
            SS QLHQ+SMSLN QQ  Q++QQQ         Q  Q   Q Q QQ QQQLQQQP   Q
Sbjct: 428 LSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQP---Q 487

Query: 484 QQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQG 543
           QQ+ QQ   QQ +Q      QQ SPR+   AGQKS+SLTGS P+AT SG +TPGGSSSQG
Sbjct: 488 QQMQQQQQQQQQMQ---INQQQPSPRMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQG 547

Query: 544 TEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEMADEFIDSVVTFSCNLAKHRKSST 603
           TEA  Q+LGKRKIQDLVSQVD H KL+P+VEDLLLE+AD+FIDSV +F+C+LAKHRKSS 
Sbjct: 548 TEATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSV 607

Query: 604 LESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSDVHKKRLDMIRILKEASRVETNVN 662
           LE KD+LLHLEKN  L +PG+SS++ K   K +  +D+HKKRL M+R L E+S+ ETN +
Sbjct: 608 LEPKDILLHLEKNLHLTIPGFSSED-KRQTKTV-PTDLHKKRLAMVRALLESSKPETNAS 667

[Close]

BLAST of Lsi02G029040 vs. TAIR 10
Match: AT3G10070.1 (TBP-associated factor 12 )

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-18
Identity = 190/607 (31.30%), Postives = 264/607 (43.49%), Query Frame = 0


Query: 12  QPNPMDPSPPPPQQQPQVQPS-----TTAIPQNSSNPSNSSVNPPIPSPSALAQSPSIDH 71
           QP     +  PP+  PQ   S     T   P  S+NPS SSV   IPS S   QSPS++ 
Sbjct: 3   QPRQSSTASQPPETPPQPSDSKPSTLTQIQPTPSTNPSPSSVVSSIPS-SPAPQSPSLNP 62

Query: 72  LHSLSQISSPPLSHISLPQNQQQQQQLSPAVGLDYQ--QKPLQQQQQQQQQQQQHSQQLV 131
             +  Q + P    ++ P  QQQQ    P V    Q   +P QQ           S  L 
Sbjct: 63  NPNPPQYTRP----VTSPATQQQQHLSQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLS 122

Query: 132 QQPQNASAMTNFQIQQALQRSPSMSRLNQMQPQQQQQFGMMRQQPGLYGQMHFGASSTNQ 191
                AS+ ++  I                    QQ+ GM    P          +S   
Sbjct: 123 SSSAPASSSSSLPI------------------SGQQRGGMAIGVP----------ASPIP 182

Query: 192 QQQQQQQQQQPNQQQQIGTGNLSRSALIGQGNHLPMLSGAAPFNLQSQLLASSKQKAGLV 251
                  Q  P+                           A P +   Q     +   G+ 
Sbjct: 183 SPSPTPSQHSPS---------------------------AFPGSFGQQYGGLGRGTVGMS 242

Query: 252 QSQFQSSNSHGQALQGIQAMGMMGSMNLTSQLRANGLASSYAQQRINQGQIRQQLSQQSS 311
           ++   +S+   + +QG Q +GMMG++   SQ+R +G+     QQR  Q  +R   +  +S
Sbjct: 243 EATSNTSSPQVRMMQGTQGIGMMGTLGSGSQIRPSGMTQH--QQRPTQSSLRP--ASSTS 302

Query: 312 LTSPQVQN-----LPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQ--QQQWLKQMPSMSTP 371
             SP  QN     L R S ++  N Q T  +        Q SLQ   Q WL   P    P
Sbjct: 303 TQSPVAQNFQGHSLMRPSPISSPNVQSTGAS--------QQSLQAINQPWLSSTPQGKPP 362

Query: 372 -GSPSFRLQQRQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQSSMGHQQLHQQQQQQ 431
              PS+R Q                   NS S+  QQ P + QQ  S             
Sbjct: 363 LPPPSYRPQ------------------VNSPSM--QQRPHIPQQHIS--------TSAAT 422

Query: 432 PQSQQQQSQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLSLTG 491
           PQ QQQQSQQQ Q      Q+QL Q  SPQ   QP+ H HQ    R+ GL  QK  S   
Sbjct: 423 PQPQQQQSQQQHQ-----PQEQLQQLRSPQ---QPLAHPHQ--PTRVQGLVNQKVTSPVM 482

Query: 492 SHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEMADE 551
                 A   +     S++   +  ++LGKR I +L+ Q+DP  KL+PEVED+L ++A++
Sbjct: 483 PSQPPVAQPGNHAKTVSAETEPSDDRILGKRSIHELLQQIDPSEKLDPEVEDILSDIAED 498

Query: 552 FIDSVVTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSDVHK 604
           F++S+ TF C+LAKHRKS  LE+KD+LLH+E+NW +  PG+SSDE+K   K L ++D+HK
Sbjct: 543 FVESITTFGCSLAKHRKSDILEAKDILLHVERNWNIRPPGFSSDEFKTFRKPL-TTDIHK 498

The following BLAST results are available for this feature:

BLAST of Lsi02G029040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2C6R6	5.5e-132	54.05	Transcription initiation factor TFIID subunit 12b OS=Arabidopsis thaliana OX=370...	[more]
Q940A7	2.1e-131	53.62	Transcription initiation factor TFIID subunit 12b OS=Arabidopsis thaliana OX=370...	[more]
Q9SR71	3.4e-17	31.30	Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Lsi02G029040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UU03	9.2e-308	92.72	Transcription initiation factor TFIID subunit 12b OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3CI72	4.7e-304	92.32	transcription initiation factor TFIID subunit 12b OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0K7T6	4.2e-300	90.63	TFIID_20kDa domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450520...	[more]
A0A6J1GNP4	1.8e-295	90.92	transcription initiation factor TFIID subunit 12b-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1GNS6	7.6e-294	90.77	transcription initiation factor TFIID subunit 12b-like isoform X3 OS=Cucurbita m...	[more]

BLAST of Lsi02G029040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897213.1	0.0e+00	94.48	transcription initiation factor TFIID subunit 12b isoform X3 [Benincasa hispida]	[more]
XP_038897210.1	6.1e-309	92.54	transcription initiation factor TFIID subunit 12b isoform X1 [Benincasa hispida]	[more]
KAA0059403.1	1.9e-307	92.72	transcription initiation factor TFIID subunit 12b [Cucumis melo var. makuwa] >TY...	[more]
XP_011659626.1	1.2e-306	93.29	transcription initiation factor TFIID subunit 12b isoform X1 [Cucumis sativus] >...	[more]
XP_038897212.1	6.1e-306	92.11	transcription initiation factor TFIID subunit 12b isoform X2 [Benincasa hispida]	[more]

BLAST of Lsi02G029040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17440.1	1.5e-132	53.62	Transcription initiation factor TFIID subunit A	[more]
AT1G17440.2	1.5e-132	53.62	Transcription initiation factor TFIID subunit A	[more]
AT3G10070.1	2.4e-18	31.30	TBP-associated factor 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..367
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..501
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..501
None	No IPR available	PANTHER	PTHR12264:SF3	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B	coord: 421..660 coord: 1..432
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 499..573 e-value: 5.8E-33 score: 114.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 502..572
IPR003228	Transcription initiation factor TFIID subunit 12 domain	PFAM	PF03847	TFIID_20kDa	coord: 505..572 e-value: 3.9E-30 score: 104.2
IPR003228	Transcription initiation factor TFIID subunit 12 domain	CDD	cd07981	TAF12	coord: 504..570 e-value: 2.00629E-34 score: 122.984
IPR037794	Transcription initiation factor TFIID subunit 12	PANTHER	PTHR12264	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	coord: 421..660 coord: 1..432

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G029040.1	Lsi02G029040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
biological_process	GO:0006413	translational initiation
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0046695	SLIK (SAGA-like) complex
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003743	translation initiation factor activity