Lsi02G028720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G028720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Auxin responsive SAUR protein
Location	chr02: 34933862 .. 34934233 (+)
RNA-Seq Expression	Lsi02G028720
Synteny	Lsi02G028720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAAAGCTGGAACTCTCACCAAGCTCAAGTCAGCCATTAAAAGATGGCCCTCGATCACCAAGCTCGGTCGGAGCTCTAGCTCGATATCGGTTGCCGCCGTGAGTGACGGTGCCAATATTGGCGAAAACATCTCCAAGGAGCTTCGCACGGTCTATGTCGGTAAGTCCCGACGACCGTATTTTGTCAGCTTAGATGTCGTAGCACACCCTTTGTTTCAAGAGCTGGTTGACAAATCGTCGTTTGAAAACGATGGCGCGATAGTGGTTTCTTGTGAGGTTGTCATGTTTGAGCATTTGTTGTGGATGTTGGAGAATGCGGCCACGCAGTTGGGGTCGACGGAGGAACTCGTCGAGTTCTACACTTGTTGA

mRNA sequence

ATGGTCAAAGCTGGAACTCTCACCAAGCTCAAGTCAGCCATTAAAAGATGGCCCTCGATCACCAAGCTCGGTCGGAGCTCTAGCTCGATATCGGTTGCCGCCGTGAGTGACGGTGCCAATATTGGCGAAAACATCTCCAAGGAGCTTCGCACGGTCTATGTCGGTAAGTCCCGACGACCGTATTTTGTCAGCTTAGATGTCGTAGCACACCCTTTGTTTCAAGAGCTGGTTGACAAATCGTCGTTTGAAAACGATGGCGCGATAGTGGTTTCTTGTGAGGTTGTCATGTTTGAGCATTTGTTGTGGATGTTGGAGAATGCGGCCACGCAGTTGGGGTCGACGGAGGAACTCGTCGAGTTCTACACTTGTTGA

Coding sequence (CDS)

ATGGTCAAAGCTGGAACTCTCACCAAGCTCAAGTCAGCCATTAAAAGATGGCCCTCGATCACCAAGCTCGGTCGGAGCTCTAGCTCGATATCGGTTGCCGCCGTGAGTGACGGTGCCAATATTGGCGAAAACATCTCCAAGGAGCTTCGCACGGTCTATGTCGGTAAGTCCCGACGACCGTATTTTGTCAGCTTAGATGTCGTAGCACACCCTTTGTTTCAAGAGCTGGTTGACAAATCGTCGTTTGAAAACGATGGCGCGATAGTGGTTTCTTGTGAGGTTGTCATGTTTGAGCATTTGTTGTGGATGTTGGAGAATGCGGCCACGCAGTTGGGGTCGACGGAGGAACTCGTCGAGTTCTACACTTGTTGA

Protein sequence

MVKAGTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRRPYFVSLDVVAHPLFQELVDKSSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELVEFYTC

Homology

[Close]

BLAST of Lsi02G028720 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.4e-27
Identity = 70/125 (56.00%), Postives = 85/125 (68.00%), Query Frame = 0


Query: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRRP 60
           M K G LTKLKSA+K+WPS  K      S S AAVSD  +   N    L  VYVG++RRP
Sbjct: 1   MAKVGKLTKLKSAMKKWPSFAK--NHHHSTSSAAVSDELSEDNN----LHVVYVGQTRRP 60

Query: 61  YFVSLDVVAHPLFQELVDKS---SFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEEL 120
           Y +  D+++HPLFQELVD+S   S E D  IVV+CEVV+FEHLLWML+ +  + GS EEL
Sbjct: 61  YMLRPDIISHPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLK-SGQEGGSVEEL 118

Query: 121 VEFYT 123
            EFYT
Sbjct: 121 AEFYT 118

[Close]

BLAST of Lsi02G028720 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.9e-26
Identity = 66/131 (50.38%), Postives = 88/131 (67.18%), Query Frame = 0


Query: 5   GTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRRPYFVS 64
           G LTKLKSAIK+WPS+TK   S+   +  AVS+ +       ++L  VYVGKSRRPY +S
Sbjct: 5   GKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSK-----CEDLHVVYVGKSRRPYMLS 64

Query: 65  LDVVAHPLFQELVDKSS-----FENDGAIVVSCEVVMFEHLLWMLENAAT--------QL 123
             V+AHPLFQEL+D+SS       +   ++V+CEVV+FEHLLWML+N+++        + 
Sbjct: 65  SHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDDRER 124

[Close]

BLAST of Lsi02G028720 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.8e-20
Identity = 62/129 (48.06%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 1   MVKAGT-LTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRR 60
           M K G  L KLKS +K+  S     + +   +    S  + +    S++L+TVYVG++RR
Sbjct: 1   MAKGGNKLMKLKSVLKKLNSFNT--KPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRR 60

Query: 61  PYFVSLDVVAHPLFQEL--VDKSSFENDGAIVVSCEVVMFEHLLWMLENA---ATQLGST 120
            Y VS DVV+HPLFQ+L  VD      DG+I VSCEVV+FEHLLWMLENA    ++  S 
Sbjct: 61  TYHVSSDVVSHPLFQQLAAVDGGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESV 120

Query: 121 EELVEFYTC 124
            ELVEFY C
Sbjct: 121 YELVEFYAC 127

[Close]

BLAST of Lsi02G028720 vs. ExPASy TrEMBL
Match: A0A0A0KAQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448680 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55
Identity = 116/125 (92.80%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENI-SKELRTVYVGKSRR 60
           MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVAAVSDGAN+GENI SKELRTVYVGKSRR
Sbjct: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGANVGENINSKELRTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDK-SSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELV 120
           PYFVSLDVV HPLFQELVDK SSF+ DG +VVSCEVVMFEHLLWMLENAATQLGSTEELV
Sbjct: 61  PYFVSLDVVTHPLFQELVDKSSSFDEDGELVVSCEVVMFEHLLWMLENAATQLGSTEELV 120

Query: 121 EFYTC 124
           EFYTC
Sbjct: 121 EFYTC 125

[Close]

BLAST of Lsi02G028720 vs. ExPASy TrEMBL
Match: A0A6J1JXK2 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111488746 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.9e-55
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MVKA-GTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRR 60
           MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVAAVSDGANI ENISKEL TVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSDGANIDENISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDKSSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDV+AHPLFQELVDKSS +ND A+VVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSSSDNDSAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 124
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of Lsi02G028720 vs. ExPASy TrEMBL
Match: A0A5D3BXT3 (Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001520 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.3e-53
Identity = 113/125 (90.40%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENI-SKELRTVYVGKSRR 60
           MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVAAVSDG N+G+N  SKELRTVYVGKSRR
Sbjct: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGGNVGDNTNSKELRTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDK-SSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELV 120
           PYFVSLDVV HPLFQELVDK SSF+ DG +VVSCEVVMFEHLLWMLENAATQLGSTEELV
Sbjct: 61  PYFVSLDVVTHPLFQELVDKSSSFDEDGELVVSCEVVMFEHLLWMLENAATQLGSTEELV 120

Query: 121 EFYTC 124
           EFYTC
Sbjct: 121 EFYTC 125

[Close]

BLAST of Lsi02G028720 vs. ExPASy TrEMBL
Match: A0A1S3CI22 (uncharacterized protein LOC103500661 OS=Cucumis melo OX=3656 GN=LOC103500661 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.3e-53
Identity = 113/125 (90.40%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENI-SKELRTVYVGKSRR 60
           MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVAAVSDG N+G+N  SKELRTVYVGKSRR
Sbjct: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGGNVGDNTNSKELRTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDK-SSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELV 120
           PYFVSLDVV HPLFQELVDK SSF+ DG +VVSCEVVMFEHLLWMLENAATQLGSTEELV
Sbjct: 61  PYFVSLDVVTHPLFQELVDKSSSFDEDGELVVSCEVVMFEHLLWMLENAATQLGSTEELV 120

Query: 121 EFYTC 124
           EFYTC
Sbjct: 121 EFYTC 125

[Close]

BLAST of Lsi02G028720 vs. ExPASy TrEMBL
Match: A0A6J1GNV0 (uncharacterized protein LOC111456121 OS=Cucurbita moschata OX=3662 GN=LOC111456121 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53
Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MVKA-GTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRR 60
           MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVAAVS+ ANIGE+ISKEL TVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSNCANIGEDISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDKSSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDV+AHPLFQELVDKS  +NDGA+VVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSMSDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 124
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of Lsi02G028720 vs. NCBI nr
Match: XP_038899152.1 (auxin-responsive protein SAUR77 [Benincasa hispida])

HSP 1 Score: 234.6 bits (597), Expect = 4.7e-58
Identity = 117/123 (95.12%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRRP 60
           MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVAAVSDGANIGENISKELRTVYVGKSRRP
Sbjct: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGANIGENISKELRTVYVGKSRRP 60

Query: 61  YFVSLDVVAHPLFQELVDKSSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELVEF 120
           Y+VSLDVVAHPLFQELVDKSSF+++GA+VVSCEVVMFEHLLWMLENAATQLGSTEELVEF
Sbjct: 61  YYVSLDVVAHPLFQELVDKSSFDDEGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVEF 120

Query: 121 YTC 124
           YTC
Sbjct: 121 YTC 123

[Close]

BLAST of Lsi02G028720 vs. NCBI nr
Match: KAG6575422.1 (Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.8 bits (569), Expect = 8.2e-55
Identity = 114/124 (91.94%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MVKA-GTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRR 60
           MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVAAVSDGANIGE+ISKEL TVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDKSSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDV+AHPLFQELVDKS+ +NDGA+VVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSASDNDGAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 124
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of Lsi02G028720 vs. NCBI nr
Match: XP_004141724.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KGN45457.1 hypothetical protein Csa_016551 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54
Identity = 116/125 (92.80%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENI-SKELRTVYVGKSRR 60
           MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVAAVSDGAN+GENI SKELRTVYVGKSRR
Sbjct: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGANVGENINSKELRTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDK-SSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELV 120
           PYFVSLDVV HPLFQELVDK SSF+ DG +VVSCEVVMFEHLLWMLENAATQLGSTEELV
Sbjct: 61  PYFVSLDVVTHPLFQELVDKSSSFDEDGELVVSCEVVMFEHLLWMLENAATQLGSTEELV 120

Query: 121 EFYTC 124
           EFYTC
Sbjct: 121 EFYTC 125

[Close]

BLAST of Lsi02G028720 vs. NCBI nr
Match: KAG7013963.1 (hypothetical protein SDJN02_24132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54
Identity = 113/124 (91.13%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MVKA-GTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRR 60
           MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVAAVSDGANIGE+ISKEL TVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDKSSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDV+AHPLFQELVDKS+ +NDGA++VSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 124
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of Lsi02G028720 vs. NCBI nr
Match: XP_022992444.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 222.6 bits (566), Expect = 1.8e-54
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MVKA-GTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRR 60
           MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVAAVSDGANI ENISKEL TVYVGKSRR
Sbjct: 1   MVKAGGTLTKLKSAIKRWPSISKLGRSSSSVSVAAVSDGANIDENISKELHTVYVGKSRR 60

Query: 61  PYFVSLDVVAHPLFQELVDKSSFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120
           PYFVSLDV+AHPLFQELVDKSS +ND A+VVSCEVVMFEHLLWMLENAATQLGSTEELVE
Sbjct: 61  PYFVSLDVIAHPLFQELVDKSSSDNDSAVVVSCEVVMFEHLLWMLENAATQLGSTEELVE 120

Query: 121 FYTC 124
           FYTC
Sbjct: 121 FYTC 124

[Close]

BLAST of Lsi02G028720 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.1 bits (305), Expect = 3.1e-28
Identity = 70/125 (56.00%), Postives = 85/125 (68.00%), Query Frame = 0


Query: 1   MVKAGTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRRP 60
           M K G LTKLKSA+K+WPS  K      S S AAVSD  +   N    L  VYVG++RRP
Sbjct: 1   MAKVGKLTKLKSAMKKWPSFAK--NHHHSTSSAAVSDELSEDNN----LHVVYVGQTRRP 60

Query: 61  YFVSLDVVAHPLFQELVDKS---SFENDGAIVVSCEVVMFEHLLWMLENAATQLGSTEEL 120
           Y +  D+++HPLFQELVD+S   S E D  IVV+CEVV+FEHLLWML+ +  + GS EEL
Sbjct: 61  YMLRPDIISHPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLK-SGQEGGSVEEL 118

Query: 121 VEFYT 123
            EFYT
Sbjct: 121 AEFYT 118

[Close]

BLAST of Lsi02G028720 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-27
Identity = 66/131 (50.38%), Postives = 88/131 (67.18%), Query Frame = 0


Query: 5   GTLTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRRPYFVS 64
           G LTKLKSAIK+WPS+TK   S+   +  AVS+ +       ++L  VYVGKSRRPY +S
Sbjct: 5   GKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSK-----CEDLHVVYVGKSRRPYMLS 64

Query: 65  LDVVAHPLFQELVDKSS-----FENDGAIVVSCEVVMFEHLLWMLENAAT--------QL 123
             V+AHPLFQEL+D+SS       +   ++V+CEVV+FEHLLWML+N+++        + 
Sbjct: 65  SHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDDRER 124

[Close]

BLAST of Lsi02G028720 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 4.9e-21
Identity = 62/129 (48.06%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 1   MVKAGT-LTKLKSAIKRWPSITKLGRSSSSISVAAVSDGANIGENISKELRTVYVGKSRR 60
           M K G  L KLKS +K+  S     + +   +    S  + +    S++L+TVYVG++RR
Sbjct: 1   MAKGGNKLMKLKSVLKKLNSFNT--KPNQPPAQTNHSRSSAVSAFPSEDLQTVYVGRTRR 60

Query: 61  PYFVSLDVVAHPLFQEL--VDKSSFENDGAIVVSCEVVMFEHLLWMLENA---ATQLGST 120
            Y VS DVV+HPLFQ+L  VD      DG+I VSCEVV+FEHLLWMLENA    ++  S 
Sbjct: 61  TYHVSSDVVSHPLFQQLAAVDGGCGSEDGSISVSCEVVLFEHLLWMLENADADESRPESV 120

Query: 121 EELVEFYTC 124
            ELVEFY C
Sbjct: 121 YELVEFYAC 127

[Close]

BLAST of Lsi02G028720 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 9   KLKSAIKRWPSI-TKLGRSSSSISVAAVSDGANIGENIS--------KELRTVYVGKSRR 68
           +L   ++R  S+ T+LGRS S  S+ + S   +  +++            +TV VG++++
Sbjct: 6   RLMMMLRRCKSVSTQLGRSYSYTSLRSKSARRDPQDHLQDVDQSPTPSMYQTVLVGRTKK 65

Query: 69  PYFVSLDVVAHPLFQELVDKSS-FENDG------AIVVSCEVVMFEHLLWMLE 106
           PY +S   + HPL   LV+K   +E D        I V CEVV+F+HLLWMLE
Sbjct: 66  PYLISKKHLKHPLLNALVEKQQRYEEDDNEDGSCIITVKCEVVLFDHLLWMLE 118

[Close]

BLAST of Lsi02G028720 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05
Identity = 22/67 (32.84%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 44  NISKELRTVYVGKSRRPYFVSLDVVAHPLFQELVDKS----SFENDGAIVVSCEVVMFEH 103
           ++ K    VYVG   R + +    ++H LF+ L++K+     F+  GA+ + CEV  F++
Sbjct: 78  DVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKY 137

Query: 104 LLWMLEN 107
           LL  +EN
Sbjct: 138 LLKCMEN 144

The following BLAST results are available for this feature:

BLAST of Lsi02G028720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9E1	4.4e-27	56.00	Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 S...	[more]
Q9LQI6	2.9e-26	50.38	Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 S...	[more]
Q29PU2	6.8e-20	48.06	Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 S...	[more]

BLAST of Lsi02G028720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAQ4	5.2e-55	92.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448680 PE=3 SV=1	[more]
A0A6J1JXK2	8.9e-55	91.94	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111488746...	[more]
A0A5D3BXT3	1.3e-53	90.40	Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CI22	1.3e-53	90.40	uncharacterized protein LOC103500661 OS=Cucumis melo OX=3656 GN=LOC103500661 PE=...	[more]
A0A6J1GNV0	1.7e-53	90.32	uncharacterized protein LOC111456121 OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]

BLAST of Lsi02G028720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899152.1	4.7e-58	95.12	auxin-responsive protein SAUR77 [Benincasa hispida]	[more]
KAG6575422.1	8.2e-55	91.94	Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004141724.1	1.1e-54	92.80	auxin-responsive protein SAUR78 [Cucumis sativus] >KGN45457.1 hypothetical prote...	[more]
KAG7013963.1	1.1e-54	91.13	hypothetical protein SDJN02_24132, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022992444.1	1.8e-54	91.94	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]

BLAST of Lsi02G028720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72430.1	3.1e-28	56.00	SAUR-like auxin-responsive protein family	[more]
AT1G17345.1	2.0e-27	50.38	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	4.9e-21	48.06	SAUR-like auxin-responsive protein family	[more]
AT3G12955.1	1.9e-09	35.40	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	2.9e-05	32.84	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 15..104 e-value: 1.6E-17 score: 63.5
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 5..123
None	No IPR available	PANTHER	PTHR31374:SF5	AUXIN-RESPONSIVE PROTEIN SAUR78	coord: 5..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G028720.1	Lsi02G028720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin