Lsi02G028640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G028640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ethylene-responsive transcription factor RAP2-12-like
Location	chr02: 34859927 .. 34861648 (+)
RNA-Seq Expression	Lsi02G028640
Synteny	Lsi02G028640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTAATGCATGGCCTCTGTTTGTTCTCTCTCTGTTTTCAACATTCAGCTGGCTTGTGATAGATCCGTTATCGCCTTCTTGATTTTGGTAGATGTTTAGGGGAATAGGGTCTTTTTATGTAGAAATTCACTTTCTGGTCATTAGGTCTCGAACAGCAGAAGCGAATTCTTTTGAGGAATAAACTGAGAACCTTTCTACTGATTTAAAAAGAAAGAAAGGGGGGAAAAAGGGGACGGGGTGCTAGATCTAGCCAATAGCCCGTGGATTTACATTTTTTATTTGATTATAGTCAAGTTTCTCCGCCTCAAATTTTTAGATTTTTCTTCGTAGTACCATGAATATTGATGAAATTACCATAGAATCGAATTTGTTATATGATGCTTACTGCTTTTCGAACATTTTCTGTCCTTTTAATTTTCTATATAAACGAAAGTTGTTTTGAGTTGTCATTTCTTTTTGGATCGGCCAAGGTAATTGCTAGATAAGTCGTGGCTTAGTGGTATTCATCTTCTTGGTTGGTCATTCATAAAATGCTTGGAACTATTTTTGGTCTCTTGCTTTATTTTTTATTATTTTTATTATTTTTTTGTGGTCCTTCAAATTATTCATCTTATTATAGCTAATGAGTATTTGAAAAAAGGTGAATCATCAGTTAACTTTTTCAAACATTTTCTACATACCCTGTCGTTTGTAGTTTCTGAATTCCTTAAATCCTTTTTATCTTGTTGACAGGGAGGGATTCAGTTTTGGTACTATGTTTTTCCCTCCTCCCGATCTGCGTATTCTTTCTTCTTCATTGCTTTAATAAGACATATACTTTGCAGCTTCAAAATCTGTAGAATTCTCTGGACAAGCTGAAAAATCTGCAAAAAGAAAGCGAAAGAATCAGTACAGGGGAATCCGACAGCGACCATGGGGTAAATGGGCTGCAGAAATTCGTGACCCACGGAAAGGAGTACGTGTGTGGCTGGGCACTTTTAATACTGCTGAAGAAGCTGCTCGAGCATATGATGCTGAGGCACGGCGAATTCGTGGAAAGAAAGCTAAGGTCAATTTTCCTGATGAAGCACCACGAACAAGTGGAAAACGTTCAGCAAAGTCAAACCTTCAGGAACCACTTCCTAAAACTAGCTTGGCAAAGACCCAAACAGATCTAATCCAGAACAATAAGTTTGTGAATAACTCTGATGAAGAATATTACAGTACCGTGGGTTTCCTGGAGGAAAAACCGCTTACAAATCAACTAGTCAACATGAATTCATTCTCTGCCAATGTAGATGGTGCAATAAAAACCAGTCCACCTTCTTCTGATGTTGCACCCATGTACTTTAATTCAGATCAAGGTAGCAATTCCTTTGATTACTCTGACTTTGGATGGGGAGAGCAGGGTGCAAAGACTCCTGAAATCTCGTCTTTTCTTTCAGCTGCCATGGAAAATGAGGATTCTCACTTTGTGGAGGATGCTTCTCCAAGGAAGAAAGTTAAGTATAGCCCAGAGAATACGGTGGTTTCTCAAGGCTCTGAGAAGACTTTATCTGAGGAGTTGTCTTCTTTTGAGTCTGAGATGAAATACTTCCAGATGCCATATCTCGATGGCAGCTGGGATGCATCAATGGATGCCTTCCTTGCGGGAGAGACAGGGAACCAGGATGGTGGAAACTCAGTCGACCTTTGGACCTTCGATGATCTTGCAGGAATGGTCGGGAGTGTCTTCTAA

mRNA sequence

ATGGCTTCAAAATCTGTAGAATTCTCTGGACAAGCTGAAAAATCTGCAAAAAGAAAGCGAAAGAATCAGTACAGGGGAATCCGACAGCGACCATGGGGTAAATGGGCTGCAGAAATTCGTGACCCACGGAAAGGAGTACGTGTGTGGCTGGGCACTTTTAATACTGCTGAAGAAGCTGCTCGAGCATATGATGCTGAGGCACGGCGAATTCGTGGAAAGAAAGCTAAGGTCAATTTTCCTGATGAAGCACCACGAACAAGTGGAAAACGTTCAGCAAAGTCAAACCTTCAGGAACCACTTCCTAAAACTAGCTTGGCAAAGACCCAAACAGATCTAATCCAGAACAATAAGTTTGTGAATAACTCTGATGAAGAATATTACAGTACCGTGGGTTTCCTGGAGGAAAAACCGCTTACAAATCAACTAGTCAACATGAATTCATTCTCTGCCAATGTAGATGGTGCAATAAAAACCAGTCCACCTTCTTCTGATGTTGCACCCATGTACTTTAATTCAGATCAAGGTAGCAATTCCTTTGATTACTCTGACTTTGGATGGGGAGAGCAGGGTGCAAAGACTCCTGAAATCTCGTCTTTTCTTTCAGCTGCCATGGAAAATGAGGATTCTCACTTTGTGGAGGATGCTTCTCCAAGGAAGAAAGTTAAGTATAGCCCAGAGAATACGGTGGTTTCTCAAGGCTCTGAGAAGACTTTATCTGAGGAGTTGTCTTCTTTTGAGTCTGAGATGAAATACTTCCAGATGCCATATCTCGATGGCAGCTGGGATGCATCAATGGATGCCTTCCTTGCGGGAGAGACAGGGAACCAGGATGGTGGAAACTCAGTCGACCTTTGGACCTTCGATGATCTTGCAGGAATGGTCGGGAGTGTCTTCTAA

Coding sequence (CDS)

ATGGCTTCAAAATCTGTAGAATTCTCTGGACAAGCTGAAAAATCTGCAAAAAGAAAGCGAAAGAATCAGTACAGGGGAATCCGACAGCGACCATGGGGTAAATGGGCTGCAGAAATTCGTGACCCACGGAAAGGAGTACGTGTGTGGCTGGGCACTTTTAATACTGCTGAAGAAGCTGCTCGAGCATATGATGCTGAGGCACGGCGAATTCGTGGAAAGAAAGCTAAGGTCAATTTTCCTGATGAAGCACCACGAACAAGTGGAAAACGTTCAGCAAAGTCAAACCTTCAGGAACCACTTCCTAAAACTAGCTTGGCAAAGACCCAAACAGATCTAATCCAGAACAATAAGTTTGTGAATAACTCTGATGAAGAATATTACAGTACCGTGGGTTTCCTGGAGGAAAAACCGCTTACAAATCAACTAGTCAACATGAATTCATTCTCTGCCAATGTAGATGGTGCAATAAAAACCAGTCCACCTTCTTCTGATGTTGCACCCATGTACTTTAATTCAGATCAAGGTAGCAATTCCTTTGATTACTCTGACTTTGGATGGGGAGAGCAGGGTGCAAAGACTCCTGAAATCTCGTCTTTTCTTTCAGCTGCCATGGAAAATGAGGATTCTCACTTTGTGGAGGATGCTTCTCCAAGGAAGAAAGTTAAGTATAGCCCAGAGAATACGGTGGTTTCTCAAGGCTCTGAGAAGACTTTATCTGAGGAGTTGTCTTCTTTTGAGTCTGAGATGAAATACTTCCAGATGCCATATCTCGATGGCAGCTGGGATGCATCAATGGATGCCTTCCTTGCGGGAGAGACAGGGAACCAGGATGGTGGAAACTCAGTCGACCTTTGGACCTTCGATGATCTTGCAGGAATGGTCGGGAGTGTCTTCTAA

Protein sequence

MASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNNSDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDYSDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEELSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF

Homology

[Close]

BLAST of Lsi02G028640 vs. ExPASy Swiss-Prot
Match: Q9LUM4 (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 6.0e-54
Identity = 145/310 (46.77%), Postives = 187/310 (60.32%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           A K+VE + QAEKS+KRKRKNQYRGIRQRPWGKWAAEIRDPRKG R WLGTF+TAEEAAR
Sbjct: 106 AKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAAR 165

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRT--SGKR-SAK-SNLQEPL--PKTSLAKTQTDLIQN 121
           AYDA ARRIRG KAKVNFP+E   +  S KR SAK +NLQ+ +  P  S+   Q     +
Sbjct: 166 AYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLS 225

Query: 122 NKFVNNSDEEYYSTVGFLEEKP--LTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSD 181
            ++ NNS +  +  + F+EEKP    NQ    NSF A  +   +           YF+SD
Sbjct: 226 QQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQ-----------YFSSD 285

Query: 182 QGSNSFDYSDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQG 241
           QGSNSFD S+FGW + G KTPEISS L   + N ++ FVE+ +  KK+K + +       
Sbjct: 286 QGSNSFDCSEFGWSDHGPKTPEISSML---VNNNEASFVEETNAAKKLKPNSDE------ 345

Query: 242 SEKTLSEELSSFESEMKYFQMPYLDGS-WDA--SMDAFLAGETG--NQDGGNSVDLWTFD 299
                S++L           M YLD + WD    ++A L  + G   Q+  N V+LW+ D
Sbjct: 346 -----SDDL-----------MAYLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLD 379

[Close]

BLAST of Lsi02G028640 vs. ExPASy Swiss-Prot
Match: Q9SSA8 (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.9e-54
Identity = 136/297 (45.79%), Postives = 170/297 (57.24%), Query Frame = 0


Query: 4   KSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAY 63
           K     G AEKSA RKRKNQYRGIRQRPWGKWAAEIRDPR+G R+WLGTF TAEEAARAY
Sbjct: 105 KVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAY 164

Query: 64  DAEARRIRGKKAKVNFPDEAPR-TSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNNS 123
           DA ARRIRG KAKVNFP+E  +  S KRS K+NLQ+P+ K +       L+QN+      
Sbjct: 165 DAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPN-PNPSPALVQNSNI---- 224

Query: 124 DEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDYS 183
               +  + F+EEK   +Q+ N N    N    +  S  +      YF+SDQGSNSFD S
Sbjct: 225 ---SFENMCFMEEK---HQVSNNN----NNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCS 284

Query: 184 DFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEEL 243
           +FGW +Q   TP+ISS  +    N  + F E+A+P KK+K                    
Sbjct: 285 EFGWSDQAPITPDISS--AVINNNNSALFFEEANPAKKLKSMD----------------- 344

Query: 244 SSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQD-GGNSVDLWTFDDLAGMVGSVF 299
                    F+ PY +  WDAS+D         QD G N +DLW+ D++  M+G VF
Sbjct: 345 ---------FETPYNNTEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 358

[Close]

BLAST of Lsi02G028640 vs. ExPASy Swiss-Prot
Match: Q6K7E6 (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-47
Identity = 138/285 (48.42%), Postives = 171/285 (60.00%), Query Frame = 0


Query: 8   FSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEA 67
           F G A KSAKRKRKNQ+RGIRQRPWGKWAAEIRDPRKGVRVWLGTFN+AEEAARAYDAEA
Sbjct: 104 FDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEA 163

Query: 68  RRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNNSDEEYY 127
           RRIRGKKAKVNFP EAP T+ KR A S   +  PK+S+ +  T     N    N++   Y
Sbjct: 164 RRIRGKKAKVNFP-EAPTTAQKRRAGSTTAK-APKSSVEQKPTVKPAFNNLA-NANAFVY 223

Query: 128 STVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDYSDFGWG 187
            +  F   KP   Q  NM         A+ ++ P  D      NSDQGSNSF  SDFGW 
Sbjct: 224 PSANFTSNKPFV-QPDNMPFVP-----AMNSAAPIED---PIINSDQGSNSFGCSDFGW- 283

Query: 188 EQGAKTPEISSF--LSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEELSSF 247
           E   KTP+I+S   +S   E ++S F++ +S    V    EN+ V          +L   
Sbjct: 284 ENDTKTPDITSIAPISTIAEVDESAFIK-SSTNPMVPPVMENSAV----------DLPDL 343

Query: 248 ESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDL 291
           E  M++     LD     S+D+ L    G+QD  +++DLW+FDD+
Sbjct: 344 EPYMRFL----LDDGAGDSIDSLL-NLDGSQDVVSNMDLWSFDDM 359

[Close]

BLAST of Lsi02G028640 vs. ExPASy Swiss-Prot
Match: P42736 (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 3.1e-26
Identity = 77/172 (44.77%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 4   KSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAY 63
           ++V+     E   +RKRKN YRGIR+RPWGKWAAEIRDPRKGVRVWLGTFNTAEEAA AY
Sbjct: 59  EAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAY 118

Query: 64  DAEARRIRGKKAKVNFPD-----EAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKF 123
           D  A++IRG KAK+NFPD         T    S +S  Q P  K  +       +    F
Sbjct: 119 DVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSF 178

Query: 124 ------VNNSDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSD 165
                   N DE    + GF  +  L  Q+ ++ SF   +DG     P   D
Sbjct: 179 PVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESF-LELDGNTAEQPSQLD 229

[Close]

BLAST of Lsi02G028640 vs. ExPASy Swiss-Prot
Match: Q8H0T5 (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 9   SGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEAR 68
           SG A    K+K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNTAEEAARAYD EA+
Sbjct: 62  SGSA-SDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAK 121

Query: 69  RIRGKKAKVNFPDEAPRTSGKRSAKS 95
           RIRG KAK+NFP+E   +SGKR AK+
Sbjct: 122 RIRGAKAKLNFPNE---SSGKRKAKA 143

[Close]

BLAST of Lsi02G028640 vs. ExPASy TrEMBL
Match: A0A0A0K9C0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448110 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.9e-151
Identity = 277/297 (93.27%), Postives = 285/297 (95.96%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFPDE PRTSGKRSAK+NLQEPLPKTSLAKTQ DLIQNN FVNN
Sbjct: 153 AYDAEARRIRGKKAKVNFPDETPRTSGKRSAKANLQEPLPKTSLAKTQPDLIQNNNFVNN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE YYST+GFLEEKPLTNQL NM+S + N D  IKTSP SSDV PMYFNSDQGSNSFDY
Sbjct: 213 SDEAYYSTMGFLEEKPLTNQLPNMDSLATNGDIVIKTSPASSDVVPMYFNSDQGSNSFDY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQGA+TPEISSFLS+AMENEDSHFVEDASP+KKVKYSPENTVVSQGSEKTLSEE
Sbjct: 273 SDFGWGEQGARTPEISSFLSSAMENEDSHFVEDASPKKKVKYSPENTVVSQGSEKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVG+VF
Sbjct: 333 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGNVF 389

[Close]

BLAST of Lsi02G028640 vs. ExPASy TrEMBL
Match: A0A5A7UTW2 (Ethylene-responsive transcription factor RAP2-12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001600 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150
Identity = 278/297 (93.60%), Postives = 284/297 (95.62%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFP EAPRTSGKRSAK NLQEPLPKTSLAKTQ D IQNN FVNN
Sbjct: 153 AYDAEARRIRGKKAKVNFPYEAPRTSGKRSAKPNLQEPLPKTSLAKTQPDPIQNNNFVNN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE YYST+GFLEEKPLTNQL NM+S + N D AIKTSP SSDVAPMYFNSDQGSNSFDY
Sbjct: 213 SDEAYYSTMGFLEEKPLTNQLPNMDSLAMNGDIAIKTSPASSDVAPMYFNSDQGSNSFDY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQG +TPEISSFLSAAM+NEDSHFVEDASP+KKVKYSPENTVVSQGSEKTLSEE
Sbjct: 273 SDFGWGEQGVRTPEISSFLSAAMDNEDSHFVEDASPKKKVKYSPENTVVSQGSEKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF
Sbjct: 333 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 389

[Close]

BLAST of Lsi02G028640 vs. ExPASy TrEMBL
Match: A0A1S3CGJ8 (LOW QUALITY PROTEIN: ethylene-responsive transcription factor RAP2-12-like OS=Cucumis melo OX=3656 GN=LOC103500652 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.3e-147
Identity = 275/297 (92.59%), Postives = 281/297 (94.61%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFP EAPRTSGKRSAK NLQEPLPKTSLAKTQ D IQNN FVNN
Sbjct: 153 AYDAEARRIRGKKAKVNFPYEAPRTSGKRSAKPNLQEPLPKTSLAKTQPDPIQNNNFVNN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE YYST+GFLEEKPLTNQL NM+S + N D AIK    SSDVAPMYFNSDQGSNSFDY
Sbjct: 213 SDEAYYSTMGFLEEKPLTNQLPNMDSLAMNGDIAIK-PVASSDVAPMYFNSDQGSNSFDY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQG +TPEISSFLSAAM+NEDSHFVEDASP+KKVKYSPENTVVSQGSEKTLSEE
Sbjct: 273 SDFGWGEQGVRTPEISSFLSAAMDNEDSHFVEDASPKKKVKYSPENTVVSQGSEKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF
Sbjct: 333 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 388

[Close]

BLAST of Lsi02G028640 vs. ExPASy TrEMBL
Match: A0A6J1GQP0 (ethylene-responsive transcription factor RAP2-12-like OS=Cucurbita moschata OX=3662 GN=LOC111456217 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 270/298 (90.60%), Postives = 283/298 (94.97%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSV+FSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVDFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFP+EAPRTSGKR +K+NLQEP+ KTSLAKTQ+D IQNN FV+N
Sbjct: 153 AYDAEARRIRGKKAKVNFPNEAPRTSGKRLSKTNLQEPVVKTSLAKTQSDQIQNNGFVSN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE+YYSTVGFL+EKPLTNQLVNMNSF AN D AIKTSPPSSDVAPMYFNSDQGSNSF+Y
Sbjct: 213 SDEDYYSTVGFLDEKPLTNQLVNMNSFPANTDVAIKTSPPSSDVAPMYFNSDQGSNSFEY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQGAKTPEISSFLSAAMENEDS+FVEDASP KKVKYSPE   VSQGS KTLSEE
Sbjct: 273 SDFGWGEQGAKTPEISSFLSAAMENEDSYFVEDASPSKKVKYSPETMEVSQGSGKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGG-NSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGG NSVDLW+FDD +GMVGS F
Sbjct: 333 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGVNSVDLWSFDDFSGMVGSAF 390

[Close]

BLAST of Lsi02G028640 vs. ExPASy TrEMBL
Match: A0A6J1JPD1 (ethylene-responsive transcription factor RAP2-12-like OS=Cucurbita maxima OX=3661 GN=LOC111488650 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.0e-145
Identity = 268/297 (90.24%), Postives = 281/297 (94.61%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFP+EAPRT+GKRSAK+NLQEP+ KTSLAKTQ+D IQNN FVNN
Sbjct: 153 AYDAEARRIRGKKAKVNFPNEAPRTNGKRSAKTNLQEPVIKTSLAKTQSDQIQNNGFVNN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE+YYSTV FL+EKPLTNQLVNMN F AN D A+KTSPPSSDVAPMYFNSDQGSNSF+Y
Sbjct: 213 SDEDYYSTVSFLDEKPLTNQLVNMNLFPANADVAMKTSPPSSDVAPMYFNSDQGSNSFEY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQGAKTPEISSFLSA+MENEDS+FVEDASP KKVKYSPE   VSQGS KTLSEE
Sbjct: 273 SDFGWGEQGAKTPEISSFLSASMENEDSYFVEDASPSKKVKYSPETMEVSQGSGKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDG NSVDLW+FDD +GMVGS F
Sbjct: 333 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGVNSVDLWSFDDFSGMVGSAF 389

[Close]

BLAST of Lsi02G028640 vs. NCBI nr
Match: XP_038897863.1 (ethylene-responsive transcription factor RAP2-12-like [Benincasa hispida])

HSP 1 Score: 550.8 bits (1418), Expect = 7.1e-153
Identity = 282/297 (94.95%), Postives = 287/297 (96.63%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFPDE PRTSGKRSAK+NLQEPLPKT LAKTQ DLIQN+KFVNN
Sbjct: 153 AYDAEARRIRGKKAKVNFPDEVPRTSGKRSAKTNLQEPLPKTRLAKTQPDLIQNDKFVNN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           S EEYYSTVGFLEEKPLTNQLVNM+SFS N DGAIKTSP SSDVAPM+FNSDQGSNSFDY
Sbjct: 213 SCEEYYSTVGFLEEKPLTNQLVNMSSFSTNGDGAIKTSPASSDVAPMFFNSDQGSNSFDY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQGAKTPEISSFLSAAME+EDSHFVED SP KKVKYSPENTVVSQGSEKTLSEE
Sbjct: 273 SDFGWGEQGAKTPEISSFLSAAMESEDSHFVEDGSPSKKVKYSPENTVVSQGSEKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLD SWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF
Sbjct: 333 LSSFESEMKYFQMPYLDSSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 389

[Close]

BLAST of Lsi02G028640 vs. NCBI nr
Match: XP_031744479.1 (ethylene-responsive transcription factor RAP2-12 isoform X2 [Cucumis sativus])

HSP 1 Score: 545.0 bits (1403), Expect = 3.9e-151
Identity = 277/297 (93.27%), Postives = 285/297 (95.96%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 17  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 76

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFPDE PRTSGKRSAK+NLQEPLPKTSLAKTQ DLIQNN FVNN
Sbjct: 77  AYDAEARRIRGKKAKVNFPDETPRTSGKRSAKANLQEPLPKTSLAKTQPDLIQNNNFVNN 136

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE YYST+GFLEEKPLTNQL NM+S + N D  IKTSP SSDV PMYFNSDQGSNSFDY
Sbjct: 137 SDEAYYSTMGFLEEKPLTNQLPNMDSLATNGDIVIKTSPASSDVVPMYFNSDQGSNSFDY 196

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQGA+TPEISSFLS+AMENEDSHFVEDASP+KKVKYSPENTVVSQGSEKTLSEE
Sbjct: 197 SDFGWGEQGARTPEISSFLSSAMENEDSHFVEDASPKKKVKYSPENTVVSQGSEKTLSEE 256

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVG+VF
Sbjct: 257 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGNVF 313

[Close]

BLAST of Lsi02G028640 vs. NCBI nr
Match: XP_004141728.1 (ethylene-responsive transcription factor RAP2-12 isoform X1 [Cucumis sativus] >XP_031744478.1 ethylene-responsive transcription factor RAP2-12 isoform X1 [Cucumis sativus] >KGN45449.1 hypothetical protein Csa_016353 [Cucumis sativus])

HSP 1 Score: 545.0 bits (1403), Expect = 3.9e-151
Identity = 277/297 (93.27%), Postives = 285/297 (95.96%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFPDE PRTSGKRSAK+NLQEPLPKTSLAKTQ DLIQNN FVNN
Sbjct: 153 AYDAEARRIRGKKAKVNFPDETPRTSGKRSAKANLQEPLPKTSLAKTQPDLIQNNNFVNN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE YYST+GFLEEKPLTNQL NM+S + N D  IKTSP SSDV PMYFNSDQGSNSFDY
Sbjct: 213 SDEAYYSTMGFLEEKPLTNQLPNMDSLATNGDIVIKTSPASSDVVPMYFNSDQGSNSFDY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQGA+TPEISSFLS+AMENEDSHFVEDASP+KKVKYSPENTVVSQGSEKTLSEE
Sbjct: 273 SDFGWGEQGARTPEISSFLSSAMENEDSHFVEDASPKKKVKYSPENTVVSQGSEKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVG+VF
Sbjct: 333 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGNVF 389

[Close]

BLAST of Lsi02G028640 vs. NCBI nr
Match: KAA0059363.1 (ethylene-responsive transcription factor RAP2-12-like [Cucumis melo var. makuwa] >TYK03963.1 ethylene-responsive transcription factor RAP2-12-like [Cucumis melo var. makuwa])

HSP 1 Score: 542.0 bits (1395), Expect = 3.3e-150
Identity = 278/297 (93.60%), Postives = 284/297 (95.62%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFP EAPRTSGKRSAK NLQEPLPKTSLAKTQ D IQNN FVNN
Sbjct: 153 AYDAEARRIRGKKAKVNFPYEAPRTSGKRSAKPNLQEPLPKTSLAKTQPDPIQNNNFVNN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE YYST+GFLEEKPLTNQL NM+S + N D AIKTSP SSDVAPMYFNSDQGSNSFDY
Sbjct: 213 SDEAYYSTMGFLEEKPLTNQLPNMDSLAMNGDIAIKTSPASSDVAPMYFNSDQGSNSFDY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQG +TPEISSFLSAAM+NEDSHFVEDASP+KKVKYSPENTVVSQGSEKTLSEE
Sbjct: 273 SDFGWGEQGVRTPEISSFLSAAMDNEDSHFVEDASPKKKVKYSPENTVVSQGSEKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF
Sbjct: 333 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 389

[Close]

BLAST of Lsi02G028640 vs. NCBI nr
Match: XP_023548217.1 (ethylene-responsive transcription factor RAP2-12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532.3 bits (1370), Expect = 2.6e-147
Identity = 272/297 (91.58%), Postives = 283/297 (95.29%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR
Sbjct: 93  ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 152

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRTSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNN 121
           AYDAEARRIRGKKAKVNFP+EAPRTSGKRS+K+NLQEP+ KTSLAKTQ+D IQNN FVNN
Sbjct: 153 AYDAEARRIRGKKAKVNFPNEAPRTSGKRSSKTNLQEPVVKTSLAKTQSDQIQNNGFVNN 212

Query: 122 SDEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDY 181
           SDE+YYSTVGFL+EKPLTNQLVNMNSF AN D AIKTSPPSSDVAPMYFNSDQGSNSF+Y
Sbjct: 213 SDEDYYSTVGFLDEKPLTNQLVNMNSFPANTDVAIKTSPPSSDVAPMYFNSDQGSNSFEY 272

Query: 182 SDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEE 241
           SDFGWGEQGAKTPEISSFLSAAMENEDS+FVEDASP KKVKYSPE   VSQGS KTLSEE
Sbjct: 273 SDFGWGEQGAKTPEISSFLSAAMENEDSYFVEDASPSKKVKYSPETMEVSQGSGKTLSEE 332

Query: 242 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGGNSVDLWTFDDLAGMVGSVF 299
           LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDG NSVDLW+FDD +GMVGS F
Sbjct: 333 LSSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQDGVNSVDLWSFDDFSGMVGSAF 389

[Close]

BLAST of Lsi02G028640 vs. TAIR 10
Match: AT3G14230.1 (related to AP2 2 )

HSP 1 Score: 212.6 bits (540), Expect = 4.3e-55
Identity = 145/310 (46.77%), Postives = 187/310 (60.32%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           A K+VE + QAEKS+KRKRKNQYRGIRQRPWGKWAAEIRDPRKG R WLGTF+TAEEAAR
Sbjct: 106 AKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAAR 165

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRT--SGKR-SAK-SNLQEPL--PKTSLAKTQTDLIQN 121
           AYDA ARRIRG KAKVNFP+E   +  S KR SAK +NLQ+ +  P  S+   Q     +
Sbjct: 166 AYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLS 225

Query: 122 NKFVNNSDEEYYSTVGFLEEKP--LTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSD 181
            ++ NNS +  +  + F+EEKP    NQ    NSF A  +   +           YF+SD
Sbjct: 226 QQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQ-----------YFSSD 285

Query: 182 QGSNSFDYSDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQG 241
           QGSNSFD S+FGW + G KTPEISS L   + N ++ FVE+ +  KK+K + +       
Sbjct: 286 QGSNSFDCSEFGWSDHGPKTPEISSML---VNNNEASFVEETNAAKKLKPNSDE------ 345

Query: 242 SEKTLSEELSSFESEMKYFQMPYLDGS-WDA--SMDAFLAGETG--NQDGGNSVDLWTFD 299
                S++L           M YLD + WD    ++A L  + G   Q+  N V+LW+ D
Sbjct: 346 -----SDDL-----------MAYLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLD 379

[Close]

BLAST of Lsi02G028640 vs. TAIR 10
Match: AT3G14230.2 (related to AP2 2 )

HSP 1 Score: 212.6 bits (540), Expect = 4.3e-55
Identity = 145/310 (46.77%), Postives = 187/310 (60.32%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           A K+VE + QAEKS+KRKRKNQYRGIRQRPWGKWAAEIRDPRKG R WLGTF+TAEEAAR
Sbjct: 102 AKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAAR 161

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRT--SGKR-SAK-SNLQEPL--PKTSLAKTQTDLIQN 121
           AYDA ARRIRG KAKVNFP+E   +  S KR SAK +NLQ+ +  P  S+   Q     +
Sbjct: 162 AYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLS 221

Query: 122 NKFVNNSDEEYYSTVGFLEEKP--LTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSD 181
            ++ NNS +  +  + F+EEKP    NQ    NSF A  +   +           YF+SD
Sbjct: 222 QQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQ-----------YFSSD 281

Query: 182 QGSNSFDYSDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQG 241
           QGSNSFD S+FGW + G KTPEISS L   + N ++ FVE+ +  KK+K + +       
Sbjct: 282 QGSNSFDCSEFGWSDHGPKTPEISSML---VNNNEASFVEETNAAKKLKPNSDE------ 341

Query: 242 SEKTLSEELSSFESEMKYFQMPYLDGS-WDA--SMDAFLAGETG--NQDGGNSVDLWTFD 299
                S++L           M YLD + WD    ++A L  + G   Q+  N V+LW+ D
Sbjct: 342 -----SDDL-----------MAYLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLD 375

[Close]

BLAST of Lsi02G028640 vs. TAIR 10
Match: AT3G14230.3 (related to AP2 2 )

HSP 1 Score: 212.6 bits (540), Expect = 4.3e-55
Identity = 145/310 (46.77%), Postives = 187/310 (60.32%), Query Frame = 0


Query: 2   ASKSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAR 61
           A K+VE + QAEKS+KRKRKNQYRGIRQRPWGKWAAEIRDPRKG R WLGTF+TAEEAAR
Sbjct: 101 AKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAAR 160

Query: 62  AYDAEARRIRGKKAKVNFPDEAPRT--SGKR-SAK-SNLQEPL--PKTSLAKTQTDLIQN 121
           AYDA ARRIRG KAKVNFP+E   +  S KR SAK +NLQ+ +  P  S+   Q     +
Sbjct: 161 AYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLS 220

Query: 122 NKFVNNSDEEYYSTVGFLEEKP--LTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSD 181
            ++ NNS +  +  + F+EEKP    NQ    NSF A  +   +           YF+SD
Sbjct: 221 QQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQ-----------YFSSD 280

Query: 182 QGSNSFDYSDFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQG 241
           QGSNSFD S+FGW + G KTPEISS L   + N ++ FVE+ +  KK+K + +       
Sbjct: 281 QGSNSFDCSEFGWSDHGPKTPEISSML---VNNNEASFVEETNAAKKLKPNSDE------ 340

Query: 242 SEKTLSEELSSFESEMKYFQMPYLDGS-WDA--SMDAFLAGETG--NQDGGNSVDLWTFD 299
                S++L           M YLD + WD    ++A L  + G   Q+  N V+LW+ D
Sbjct: 341 -----SDDL-----------MAYLDNALWDTPLEVEAMLGADAGAVTQEEENPVELWSLD 374

[Close]

BLAST of Lsi02G028640 vs. TAIR 10
Match: AT1G53910.1 (related to AP2 12 )

HSP 1 Score: 212.2 bits (539), Expect = 5.6e-55
Identity = 136/297 (45.79%), Postives = 170/297 (57.24%), Query Frame = 0


Query: 4   KSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAY 63
           K     G AEKSA RKRKNQYRGIRQRPWGKWAAEIRDPR+G R+WLGTF TAEEAARAY
Sbjct: 105 KVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAY 164

Query: 64  DAEARRIRGKKAKVNFPDEAPR-TSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNNS 123
           DA ARRIRG KAKVNFP+E  +  S KRS K+NLQ+P+ K +       L+QN+      
Sbjct: 165 DAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPN-PNPSPALVQNSNI---- 224

Query: 124 DEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDYS 183
               +  + F+EEK   +Q+ N N    N    +  S  +      YF+SDQGSNSFD S
Sbjct: 225 ---SFENMCFMEEK---HQVSNNN----NNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCS 284

Query: 184 DFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEEL 243
           +FGW +Q   TP+ISS  +    N  + F E+A+P KK+K                    
Sbjct: 285 EFGWSDQAPITPDISS--AVINNNNSALFFEEANPAKKLKSMD----------------- 344

Query: 244 SSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQD-GGNSVDLWTFDDLAGMVGSVF 299
                    F+ PY +  WDAS+D         QD G N +DLW+ D++  M+G VF
Sbjct: 345 ---------FETPYNNTEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 358

[Close]

BLAST of Lsi02G028640 vs. TAIR 10
Match: AT1G53910.2 (related to AP2 12 )

HSP 1 Score: 212.2 bits (539), Expect = 5.6e-55
Identity = 136/297 (45.79%), Postives = 170/297 (57.24%), Query Frame = 0


Query: 4   KSVEFSGQAEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAY 63
           K     G AEKSA RKRKNQYRGIRQRPWGKWAAEIRDPR+G R+WLGTF TAEEAARAY
Sbjct: 105 KVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAY 164

Query: 64  DAEARRIRGKKAKVNFPDEAPR-TSGKRSAKSNLQEPLPKTSLAKTQTDLIQNNKFVNNS 123
           DA ARRIRG KAKVNFP+E  +  S KRS K+NLQ+P+ K +       L+QN+      
Sbjct: 165 DAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPN-PNPSPALVQNSNI---- 224

Query: 124 DEEYYSTVGFLEEKPLTNQLVNMNSFSANVDGAIKTSPPSSDVAPMYFNSDQGSNSFDYS 183
               +  + F+EEK   +Q+ N N    N    +  S  +      YF+SDQGSNSFD S
Sbjct: 225 ---SFENMCFMEEK---HQVSNNN----NNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCS 284

Query: 184 DFGWGEQGAKTPEISSFLSAAMENEDSHFVEDASPRKKVKYSPENTVVSQGSEKTLSEEL 243
           +FGW +Q   TP+ISS  +    N  + F E+A+P KK+K                    
Sbjct: 285 EFGWSDQAPITPDISS--AVINNNNSALFFEEANPAKKLKSMD----------------- 344

Query: 244 SSFESEMKYFQMPYLDGSWDASMDAFLAGETGNQD-GGNSVDLWTFDDLAGMVGSVF 299
                    F+ PY +  WDAS+D         QD G N +DLW+ D++  M+G VF
Sbjct: 345 ---------FETPYNNTEWDASLDFLNEDAVTTQDNGANPMDLWSIDEIHSMIGGVF 358

The following BLAST results are available for this feature:

BLAST of Lsi02G028640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUM4	6.0e-54	46.77	Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SSA8	7.9e-54	45.79	Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702...	[more]
Q6K7E6	1.1e-47	48.42	Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39...	[more]
P42736	3.1e-26	44.77	Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H0T5	1.5e-25	70.93	Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lsi02G028640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9C0	1.9e-151	93.27	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448110 PE=...	[more]
A0A5A7UTW2	1.6e-150	93.60	Ethylene-responsive transcription factor RAP2-12-like OS=Cucumis melo var. makuw...	[more]
A0A1S3CGJ8	6.3e-147	92.59	LOW QUALITY PROTEIN: ethylene-responsive transcription factor RAP2-12-like OS=Cu...	[more]
A0A6J1GQP0	1.2e-145	90.60	ethylene-responsive transcription factor RAP2-12-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1JPD1	2.0e-145	90.24	ethylene-responsive transcription factor RAP2-12-like OS=Cucurbita maxima OX=366...	[more]

BLAST of Lsi02G028640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897863.1	7.1e-153	94.95	ethylene-responsive transcription factor RAP2-12-like [Benincasa hispida]	[more]
XP_031744479.1	3.9e-151	93.27	ethylene-responsive transcription factor RAP2-12 isoform X2 [Cucumis sativus]	[more]
XP_004141728.1	3.9e-151	93.27	ethylene-responsive transcription factor RAP2-12 isoform X1 [Cucumis sativus] >X...	[more]
KAA0059363.1	3.3e-150	93.60	ethylene-responsive transcription factor RAP2-12-like [Cucumis melo var. makuwa]...	[more]
XP_023548217.1	2.6e-147	91.58	ethylene-responsive transcription factor RAP2-12-like [Cucurbita pepo subsp. pep...	[more]

BLAST of Lsi02G028640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14230.1	4.3e-55	46.77	related to AP2 2	[more]
AT3G14230.2	4.3e-55	46.77	related to AP2 2	[more]
AT3G14230.3	4.3e-55	46.77	related to AP2 2	[more]
AT1G53910.1	5.6e-55	45.79	related to AP2 12	[more]
AT1G53910.2	5.6e-55	45.79	related to AP2 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 24..35 score: 70.45 coord: 46..62 score: 73.69
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 2.1E-36 score: 136.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..72 e-value: 1.3E-12 score: 47.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 24.091541
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..81 e-value: 2.3822E-33 score: 115.061
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..81 e-value: 2.1E-26 score: 93.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31190:SF210	EREBP TRANSCRIPTION FACTOR	coord: 2..291
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 2..291
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 23..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G028640.1	Lsi02G028640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity