Lsi02G027700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G027700
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	thionin-like protein 2
Location	chr02: 33947536 .. 33950643 (+)
RNA-Seq Expression	Lsi02G027700
Synteny	Lsi02G027700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCCACCGTAGAAGAGGAAGGGAGATCAAAACAAAGGCTTAATTTTCATCATCATAAAATGGAGAGCGGGATGGCAATGAAATGGGCTTTAATGGCTTGTCTGGTGCTTAGCTCGCTCTCCATGGCGAATTCTGAAACTTATCAAGATTGCTACAGCTCCTGCTTCGTCGTATGCGCCGTCACGCCCGGCATCGCCTTCTCCGACTGCCCGTCGAGATGTCTGCATTCTTGCAATGGCGGATCTACCAAGGGCCAAGCGGAGCCTCACAAATTATAAAGTCTTTATATAATGTTTAATTAATAATACGTTTGCCTTATTTCTTCAAGGTTGATTCATGCTTCAATGCTCCTTTGACCTGGGTTTGACTCCACTGGCCCCTATTTTAATTTTTAATTTTTATTTTATCTCATTTCTGAGACATATTTATACATTCTTTTAATTTTCAATATTTTTATTTATTTATCCGGATATTACTCTTCTTATCTCATTTTCTAATTTTCCAATCTTATATATTTAACATTTTATATAATTTTGTAAGTATTATTACTTAATCTACACACTATACGGGGAAATTACTATAAACAGAAAAAATATCAAACTATTTACAAATATATAAAAATTTCACTTTCTATCAGTGATAGATCCTATCGCTCAAGCTGTAGAATTCTATTGCAGTATTTTGTGAGCTCGGGCCCATTTGGATTGACTTGAGAAAAAAATATTTTTCAAAAAACTCATTTTTATTTAAACTATTTTGATAAAAACTGTTTAAAATACCTTTCAAAAACTATTTTGAACCGTTGCCAAATACTTAAAATTTTTTCAAAACGACTTATTTTTAAAATTAAACACTTGAAAATGTATTCCAAACACACTATTCGAATATGCAAGTTGTTTGTGTGCCAACAAACAGAAAGTTTTATAAGGACTAACTCATATATTTCTATATTTTCTATGTGAAATCTCAACATATACTTTAAAATCAATGGAAAAAGCCAAGAAGAAAAGAGAGAGAGGCAAGGCTCATTTCTTAATACTTATTAAGTTGAAGAGGATTATGTTAAAAATAATATTTTAATATTTTTTTTTCCCTAATTTGCTTTCTTAACATTTTTATTTGGAAGATAACATGAATAAAAAAGTTTAAAAGAAAGTTTTTATCTTTGTTTGAAAAAGTATTGCTGGGATCACATGTGAAGTTTTCTTTTGTTTTGTTGATGCTGAAAGAGAAGTGGGGAACTGTGTGGAATTCTTGCTCTCAAATATGTTCCATTGATTGAATCTGCATATCTGCTAAATGAAGCCATTAAACTACAATTTCTTTTCTTTTCTTTTCTTTTCTGGAAAAGATAAGTACAAATATATATATAATATAAGTTATTGTGTTTTGTTGGAATTTCTCTTTACACACTAAAGAAAGATTTGGGTTTAAGTGTTGAGGCAAATTAAGCTAACTTTATATTTTGATTTCTAATATTATATTTTAGTTTTTTTTTATTAAATTTTATTTGATAACTATTTCATTTTTTTGATAATTAAATTTATAAACACAATTTTTACCCTTTTTGTTTTGTTATCTATTCATTAGGAATGTTTTAAAAAACAAGTTATATTTTAAAAACTTAAAAAAAATAGTTTATAAAAAGGAAAATTTTTAAAAATAGAAAAATAAGAGAAACTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGTTAATAGAAGTCTATAAGAGTATATCAGTGATGGAAATGATAAAAGTCTATCACTGATAAATACTGATAGAAGTCTACCAATGTCTATTAGTTTTTTTTTTTTTTTTTAAATAGTTTGATATTTTTTCTATTTGTGAAAATTTTTTCTTATAAAAACTTGTATTTGTTTTTAGAATTGCTCAAATGTTTAGTTAGAAAAGATAAAAACTTTGGAAATTAGTTATAAGAAAACAAACAATATTTTTAAAAAATAAAAAAATTAAATAATTATCAAACAGACATTAATTAAGTATATTTTTCAAAATAGATATGGCTATTTGTTTGAGCTCTCAAATCAACTGTGTCTAAACTTGAGCCTATTTAAGTCTCCACCATAGAATAGGAAGGGAGAAAACAAAGGCTTCATTTTCATCCTCATCAGTCGTCAATGGAGAGCAACATGGGAAAGAAATGGGCATTAATGTCTTGGCTGCTGCTGACCTCGCTGATCTCCACGGCCAATTCCACCTCCTTTCAAGAATGCTACGCCACCTGCTTCGTCATATGCGCCCTCACGCCCGGTGTCTCCTTCTCCGACTGCCCCTTGAGATGCCTGCAAGCTTGCATCATCCCGTCTTTTCCTATCGATAACGCCAACGTTCATCGGCAACAACAAAATCAATTCTTCTGTGAGCTCGGCTGCGCAGCTTCCTCATGTACCAAGTTTAGCACAAAGCAAAATCCAGGTTTGAAATTTACATTCCGTTTTTAGTTATTTTTTAGATAGTTGAGATAGAGAAGTTTATCAAAGTCTACTAGAAATAATAGAAGTTTATAACTGATAGATGTTGATAGAAATCTATCGATGTCTATCATTTTTTTATTTACTATTTTTTATTATTTAATAAACATAAAATTTCGTAAGGACTAATGTATTAGTTATGAAGCGGATTATGTTAAAAATAATACTTAATTTTTTTTTATCTCTAGTTTGCTTTCTTAACATTTTTATTTTGAAGATTACGAATCTATGAGTATAAAAACGTTTTGACGAATTCTTTTTTTTTTTTTTTTTTTAAATATTTATTTATGAAAATGTATTGCTTGGTTCACATGTGAAGTCTTTTTTTATTTTTTATTTTTTAATGTTGATGCAGCTGAAAAAGAAGTGGGGAGATGTGTGGATTCTTGCTCTCAAACATGTTTCATGGATTGATCTGCATCTGCTAAATGAAGCCAATAAACTACTTTTTTTCTTTCTTTTTTTTTTTCCCCCCTTTTTGTTGAAAAAATAAGTACATAGTATAAGTAATATATTGAGTTTTATTTAGAAATGAAACTACATTATTATTGCTGGAATTCCATTCAATACTAAAGAAATATTTTGGGTTTAAGTGCTAAGGC

mRNA sequence

TGTCCACCGTAGAAGAGGAAGGGAGATCAAAACAAAGGCTTAATTTTCATCATCATAAAATGGAGAGCGGGATGGCAATGAAATGGGCTTTAATGGCTTGTCTGGTGCTTAGCTCGCTCTCCATGGCGAATTCTGAAACTTATCAAGATTGCTACAGCTCCTGCTTCGTCGTATGCGCCGTCACGCCCGGCATCGCCTTCTCCGACTGCCCGTCGAGATTATTGCTGGGATCACATGTGAAGTTTTCTTTTGTTTTGTTGATGCTGAAAGAGAAGTGGGGAACTTCGTCAATGGAGAGCAACATGGGAAAGAAATGGGCATTAATGTCTTGGCTGCTGCTGACCTCGCTGATCTCCACGGCCAATTCCACCTCCTTTCAAGAATGCTACGCCACCTGCTTCGTCATATGCGCCCTCACGCCCGGTGTCTCCTTCTCCGACTGCCCCTTGAGATGCCTGCAAGCTTGCATCATCCCGTCTTTTCCTATCGATAACGCCAACGTTCATCGGCAACAACAAAATCAATTCTTCTGTGAGCTCGGCTGCGCAGCTTCCTCATCTGAAAAAGAAGTGGGGAGATGTGTGGATTCTTGCTCTCAAACATGTTTCATGGATTGATCTGCATCTGCTAAATGAAGCCAATAAACTACTTTTTTTCTTTCTTTTTTTTTTTCCCCCCTTTTTGTTGAAAAAATAAGTACATAGTATAAGTAATATATTGAGTTTTATTTAGAAATGAAACTACATTATTATTGCTGGAATTCCATTCAATACTAAAGAAATATTTTGGGTTTAAGTGCTAAGGC

Coding sequence (CDS)

ATGGAGAGCGGGATGGCAATGAAATGGGCTTTAATGGCTTGTCTGGTGCTTAGCTCGCTCTCCATGGCGAATTCTGAAACTTATCAAGATTGCTACAGCTCCTGCTTCGTCGTATGCGCCGTCACGCCCGGCATCGCCTTCTCCGACTGCCCGTCGAGATTATTGCTGGGATCACATGTGAAGTTTTCTTTTGTTTTGTTGATGCTGAAAGAGAAGTGGGGAACTTCGTCAATGGAGAGCAACATGGGAAAGAAATGGGCATTAATGTCTTGGCTGCTGCTGACCTCGCTGATCTCCACGGCCAATTCCACCTCCTTTCAAGAATGCTACGCCACCTGCTTCGTCATATGCGCCCTCACGCCCGGTGTCTCCTTCTCCGACTGCCCCTTGAGATGCCTGCAAGCTTGCATCATCCCGTCTTTTCCTATCGATAACGCCAACGTTCATCGGCAACAACAAAATCAATTCTTCTGTGAGCTCGGCTGCGCAGCTTCCTCATCTGAAAAAGAAGTGGGGAGATGTGTGGATTCTTGCTCTCAAACATGTTTCATGGATTGA

Protein sequence

MESGMAMKWALMACLVLSSLSMANSETYQDCYSSCFVVCAVTPGIAFSDCPSRLLLGSHVKFSFVLLMLKEKWGTSSMESNMGKKWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACIIPSFPIDNANVHRQQQNQFFCELGCAASSSEKEVGRCVDSCSQTCFMD

Homology

[Close]

BLAST of Lsi02G027700 vs. ExPASy Swiss-Prot
Match: F4IDU9 (Thionin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g12660 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.9e-04
Identity = 33/103 (32.04%), Postives = 43/103 (41.75%), Query Frame = 0


Query: 78  MESNMGKKWALMSWLLLTSLISTANSTSFQECYATCFVICAL-TPGVSFSDCPLRCLQAC 137
           ME        +M  ++   LI      SF+ CY  C V CAL  P +    CP  C++ C
Sbjct: 1   MEDKRVAMLVVMMLVMGNMLIEAEAVMSFKLCYGGCLVACALIAPPIKKLFCPFLCIKDC 60

Query: 138 IIPSFPIDNANVHRQQQNQFFCELGCAASSSEKEVGRCVDSCS 180
                    AN++   Q   +CELGCA         RCV S S
Sbjct: 61  KRRPMLSFEANLNEIDQTGSYCELGCATD-------RCVSSSS 96

[Close]

BLAST of Lsi02G027700 vs. ExPASy TrEMBL
Match: A0A0A0K781 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.4e-40
Identity = 90/120 (75.00%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 78  MESNMGKKWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACI 137
           ME+ + KKWALM+WLLLTSL STANSTSFQECYATCFVICA+TPGV+FSDCPLRCLQACI
Sbjct: 1   MENVLAKKWALMAWLLLTSL-STANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACI 60

Query: 138 IPSFPIDNAN-VHR-QQQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           +PSFPID+A+ VHR QQQN FFC+LGCAASS           E++VGRCVDSCSQTC M+
Sbjct: 61  VPSFPIDDADVVHRQQQQNHFFCKLGCAASSCTKFSTKQNPGERKVGRCVDSCSQTCSMN 119

[Close]

BLAST of Lsi02G027700 vs. ExPASy TrEMBL
Match: A0A1S3CDU4 (thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39
Identity = 89/120 (74.17%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 78  MESNMGKKWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACI 137
           ME+ + KKWALM+WLLLTSL STANSTSFQECYATCFVICA+TPGV+FSDCPLRCLQACI
Sbjct: 1   MENILAKKWALMAWLLLTSL-STANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACI 60

Query: 138 IPSFPIDNAN-VHRQ-QQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           +PSFPID+ + VHRQ QQN FFC+LGCAASS           E++V RCVDSCSQTC MD
Sbjct: 61  VPSFPIDDDDVVHRQKQQNHFFCKLGCAASSCTKFSTKQNPGERKVERCVDSCSQTCSMD 119

[Close]

BLAST of Lsi02G027700 vs. ExPASy TrEMBL
Match: A0A6J1GMH5 (thionin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455863 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 7.4e-37
Identity = 84/115 (73.04%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 85  KWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACIIPSFPID 144
           K  LM+WL+L+SL +TANSTSFQECYATCFVICA+TPGV+FSDCPLRCLQACIIPSFPI 
Sbjct: 7   KLGLMAWLVLSSL-TTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIH 66

Query: 145 NA----NVHRQQQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           NA    +VHRQQ+NQFFCELGCAASS          +EK+VG CVDSCS+TC MD
Sbjct: 67  NAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAEKKVGSCVDSCSRTCSMD 120

[Close]

BLAST of Lsi02G027700 vs. ExPASy TrEMBL
Match: A0A6J1JZ84 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488748 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 83/114 (72.81%), Postives = 95/114 (83.33%), Query Frame = 0


Query: 85  KWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACIIPSFPID 144
           K  LM+WL+L+SL +TANSTSFQECYATCF+ICA+TPGV+FSDCPLRCLQACIIPSFPI 
Sbjct: 7   KLGLMAWLVLSSL-TTANSTSFQECYATCFLICAITPGVAFSDCPLRCLQACIIPSFPIH 66

Query: 145 NA---NVHRQQQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           NA   +VHRQQ+NQFFCELGCAASS          +EK+VG CVDSCS+TC MD
Sbjct: 67  NAAADDVHRQQKNQFFCELGCAASSCTKFSTQKNPAEKKVGSCVDSCSRTCSMD 119

[Close]

BLAST of Lsi02G027700 vs. ExPASy TrEMBL
Match: A0A6J1CW29 (thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111015320 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.3e-30
Identity = 76/127 (59.84%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 78  MESNMGKKWAL---MSWL-LLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCL 137
           ME+  G KW L   M WL +++S+++TA STSFQECYATCFVICA+TPG SFS+CPL+CL
Sbjct: 1   MENRRG-KWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCL 60

Query: 138 QACIIPSFPIDNA-----NVHRQQQNQFFCELGCAA----------SSSEKEVGRCVDSC 186
           QACIIPSFPID+A        R+  N FFC+LGCAA          + +EK+VGRCVDSC
Sbjct: 61  QACIIPSFPIDDAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPAEKKVGRCVDSC 120

[Close]

BLAST of Lsi02G027700 vs. NCBI nr
Match: XP_038899383.1 (thionin-like protein 2 [Benincasa hispida])

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-42
Identity = 89/114 (78.07%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 82  MGKKWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACIIPSF 141
           M KKWAL++WLLL+SL STANSTSFQECYATCFVICA+TPGV+FSDCPLRCLQACIIPSF
Sbjct: 1   MAKKWALIAWLLLSSL-STANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSF 60

Query: 142 PIDNANVHRQQQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           PIDN +VHRQ+QNQFFC+LGCA SS          +EKEVG CVDSCSQTC MD
Sbjct: 61  PIDNNDVHRQEQNQFFCKLGCAVSSCTKFSTKQNPAEKEVGNCVDSCSQTCSMD 113

[Close]

BLAST of Lsi02G027700 vs. NCBI nr
Match: XP_011659556.1 (thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_016713 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 5.0e-40
Identity = 90/120 (75.00%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 78  MESNMGKKWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACI 137
           ME+ + KKWALM+WLLLTSL STANSTSFQECYATCFVICA+TPGV+FSDCPLRCLQACI
Sbjct: 1   MENVLAKKWALMAWLLLTSL-STANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACI 60

Query: 138 IPSFPIDNAN-VHR-QQQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           +PSFPID+A+ VHR QQQN FFC+LGCAASS           E++VGRCVDSCSQTC M+
Sbjct: 61  VPSFPIDDADVVHRQQQQNHFFCKLGCAASSCTKFSTKQNPGERKVGRCVDSCSQTCSMN 119

[Close]

BLAST of Lsi02G027700 vs. NCBI nr
Match: XP_008461039.1 (PREDICTED: thionin-like protein 2 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 5.6e-39
Identity = 89/120 (74.17%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 78  MESNMGKKWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACI 137
           ME+ + KKWALM+WLLLTSL STANSTSFQECYATCFVICA+TPGV+FSDCPLRCLQACI
Sbjct: 1   MENILAKKWALMAWLLLTSL-STANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACI 60

Query: 138 IPSFPIDNAN-VHRQ-QQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           +PSFPID+ + VHRQ QQN FFC+LGCAASS           E++V RCVDSCSQTC MD
Sbjct: 61  VPSFPIDDDDVVHRQKQQNHFFCKLGCAASSCTKFSTKQNPGERKVERCVDSCSQTCSMD 119

[Close]

BLAST of Lsi02G027700 vs. NCBI nr
Match: XP_022953260.1 (thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein 2 [Cucurbita moschata])

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-36
Identity = 84/115 (73.04%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 85  KWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACIIPSFPID 144
           K  LM+WL+L+SL +TANSTSFQECYATCFVICA+TPGV+FSDCPLRCLQACIIPSFPI 
Sbjct: 7   KLGLMAWLVLSSL-TTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIH 66

Query: 145 NA----NVHRQQQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           NA    +VHRQQ+NQFFCELGCAASS          +EK+VG CVDSCS+TC MD
Sbjct: 67  NAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAEKKVGSCVDSCSRTCSMD 120

[Close]

BLAST of Lsi02G027700 vs. NCBI nr
Match: XP_022992447.1 (thionin-like protein 2 [Cucurbita maxima] >XP_022992448.1 thionin-like protein 2 [Cucurbita maxima])

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-36
Identity = 83/114 (72.81%), Postives = 95/114 (83.33%), Query Frame = 0


Query: 85  KWALMSWLLLTSLISTANSTSFQECYATCFVICALTPGVSFSDCPLRCLQACIIPSFPID 144
           K  LM+WL+L+SL +TANSTSFQECYATCF+ICA+TPGV+FSDCPLRCLQACIIPSFPI 
Sbjct: 7   KLGLMAWLVLSSL-TTANSTSFQECYATCFLICAITPGVAFSDCPLRCLQACIIPSFPIH 66

Query: 145 NA---NVHRQQQNQFFCELGCAASS----------SEKEVGRCVDSCSQTCFMD 186
           NA   +VHRQQ+NQFFCELGCAASS          +EK+VG CVDSCS+TC MD
Sbjct: 67  NAAADDVHRQQKNQFFCELGCAASSCTKFSTQKNPAEKKVGSCVDSCSRTCSMD 119

[Close]

BLAST of Lsi02G027700 vs. TAIR 10
Match: AT1G12660.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. )

HSP 1 Score: 45.4 bits (106), Expect = 5.6e-05
Identity = 33/103 (32.04%), Postives = 43/103 (41.75%), Query Frame = 0


Query: 78  MESNMGKKWALMSWLLLTSLISTANSTSFQECYATCFVICAL-TPGVSFSDCPLRCLQAC 137
           ME        +M  ++   LI      SF+ CY  C V CAL  P +    CP  C++ C
Sbjct: 1   MEDKRVAMLVVMMLVMGNMLIEAEAVMSFKLCYGGCLVACALIAPPIKKLFCPFLCIKDC 60

Query: 138 IIPSFPIDNANVHRQQQNQFFCELGCAASSSEKEVGRCVDSCS 180
                    AN++   Q   +CELGCA         RCV S S
Sbjct: 61  KRRPMLSFEANLNEIDQTGSYCELGCATD-------RCVSSSS 96

The following BLAST results are available for this feature:

BLAST of Lsi02G027700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IDU9	7.9e-04	32.04	Thionin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g12660 PE=3 SV=1	[more]

BLAST of Lsi02G027700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K781	2.4e-40	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1	[more]
A0A1S3CDU4	2.7e-39	74.17	thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1	[more]
A0A6J1GMH5	7.4e-37	73.04	thionin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111455863 PE=4 SV=1	[more]
A0A6J1JZ84	1.3e-36	72.81	thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488748 PE=4 SV=1	[more]
A0A6J1CW29	2.3e-30	59.84	thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111015320 PE=4 SV=1	[more]

BLAST of Lsi02G027700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899383.1	5.4e-42	78.07	thionin-like protein 2 [Benincasa hispida]	[more]
XP_011659556.1	5.0e-40	75.00	thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_01...	[more]
XP_008461039.1	5.6e-39	74.17	PREDICTED: thionin-like protein 2 [Cucumis melo]	[more]
XP_022953260.1	1.5e-36	73.04	thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein...	[more]
XP_022992447.1	2.6e-36	72.81	thionin-like protein 2 [Cucurbita maxima] >XP_022992448.1 thionin-like protein 2...	[more]

BLAST of Lsi02G027700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12660.1	5.6e-05	32.04	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant t...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038975	Thionin-like protein	PANTHER	PTHR36312	THIONIN-LIKE PROTEIN 1	coord: 6..54
IPR038975	Thionin-like protein	PANTHER	PTHR36312	THIONIN-LIKE PROTEIN 1	coord: 85..183
None	No IPR available	PANTHER	PTHR36312:SF1	THIONIN-LIKE PROTEIN 1	coord: 6..54
None	No IPR available	PANTHER	PTHR36312:SF1	THIONIN-LIKE PROTEIN 1	coord: 85..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G027700.1	Lsi02G027700.1	mRNA