
Lsi02G027520 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACCGTAATTTATGGTGTTTGGTTTTTGGTAGAGAAGGCTTGGAGCAATGATAGAATAGAATCACCAACTCATAAAGTGATGATAAGAGGGAATGAAGATAGGTACTCTCTTGCAATGTTTGGATTTAGCAATGGAATTGTGGAAGTGCCAAAAGAGCTTGTAGATCAAAATCATCCTTTGCGATATAAACCTTTTGACCATATTGGATTGCTTCATTTCTTCCGCTCTAAAGAGGGTTTCAACTCCAAATCTCCCCTCAAAGATTATTGTGCTCTCTCTAATTAA ATGAACCAGAAGGCTTGGAGCAATGATAGAATAGAATCACCAACTCATAAAGTGATGATAAGAGGGAATGAAGATAGGTACTCTCTTGCAATGTTTGGATTTAGCAATGGAATTGTGGAAGTGCCAAAAGAGCTTGTAGATCAAAATCATCCTTTGCGATATAAACCTTTTGACCATATTGGATTGCTTCATTTCTTCCGCTCTAAAGAGGGTTTCAACTCCAAATCTCCCCTCAAAGATTATTGTGCTCTCTCTAATTAA ATGAACCAGAAGGCTTGGAGCAATGATAGAATAGAATCACCAACTCATAAAGTGATGATAAGAGGGAATGAAGATAGGTACTCTCTTGCAATGTTTGGATTTAGCAATGGAATTGTGGAAGTGCCAAAAGAGCTTGTAGATCAAAATCATCCTTTGCGATATAAACCTTTTGACCATATTGGATTGCTTCATTTCTTCCGCTCTAAAGAGGGTTTCAACTCCAAATCTCCCCTCAAAGATTATTGTGCTCTCTCTAATTAA MNQKAWSNDRIESPTHKVMIRGNEDRYSLAMFGFSNGIVEVPKELVDQNHPLRYKPFDHIGLLHFFRSKEGFNSKSPLKDYCALSN Homology
BLAST of Lsi02G027520 vs. ExPASy Swiss-Prot
Match: A0A0N9HQ36 (Deoxypodophyllotoxin synthase OS=Sinopodophyllum hexandrum OX=93608 GN=2-ODD PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy Swiss-Prot
Match: Q945B4 (2-oxoglutarate-dependent dioxygenase AOP3 OS=Arabidopsis thaliana OX=3702 GN=AOP3 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.4e-11 Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy Swiss-Prot
Match: Q9ZTA3 (Probable 2-oxoglutarate-dependent dioxygenase AOP1 OS=Arabidopsis thaliana OX=3702 GN=AOP1 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.1e-11 Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy Swiss-Prot
Match: Q945B6 (Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 OS=Arabidopsis thaliana OX=3702 GN=AOP1.2 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.1e-11 Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy Swiss-Prot
Match: Q9ZTA1 (2-oxoglutarate-dependent dioxygenase AOP3 OS=Arabidopsis thaliana OX=3702 GN=AOP3 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-10 Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy TrEMBL
Match: A0A6J1JM78 (probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 OS=Cucurbita maxima OX=3661 GN=LOC111488145 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.1e-39 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy TrEMBL
Match: A0A6J1GRH7 (probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 OS=Cucurbita moschata OX=3662 GN=LOC111456372 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.1e-39 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy TrEMBL
Match: A0A6J1DBW9 (probable 2-oxoglutarate-dependent dioxygenase AOP1 OS=Momordica charantia OX=3673 GN=LOC111019607 PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.4e-36 Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy TrEMBL
Match: A0A6A1W048 (Putative 2-oxoglutarate-dependent dioxygenase AOP1.2 OS=Morella rubra OX=262757 GN=CJ030_MR3G026499 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.3e-30 Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 0
BLAST of Lsi02G027520 vs. ExPASy TrEMBL
Match: A0A5N5P2Y4 (Fe2OG dioxygenase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_001328 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.5e-28 Identity = 54/82 (65.85%), Postives = 70/82 (85.37%), Query Frame = 0
BLAST of Lsi02G027520 vs. NCBI nr
Match: XP_038896850.1 (probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 [Benincasa hispida]) HSP 1 Score: 175.6 bits (444), Expect = 1.8e-40 Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Lsi02G027520 vs. NCBI nr
Match: XP_031744406.1 (2-oxoglutarate-dependent dioxygenase AOP3 isoform X2 [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 3.1e-40 Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Lsi02G027520 vs. NCBI nr
Match: XP_004136074.1 (2-oxoglutarate-dependent dioxygenase AOP2 isoform X1 [Cucumis sativus] >KAE8646455.1 hypothetical protein Csa_015846 [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 3.1e-40 Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Lsi02G027520 vs. NCBI nr
Match: XP_022953974.1 (probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 [Cucurbita moschata]) HSP 1 Score: 169.1 bits (427), Expect = 1.7e-38 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of Lsi02G027520 vs. NCBI nr
Match: XP_022991572.1 (probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 [Cucurbita maxima]) HSP 1 Score: 169.1 bits (427), Expect = 1.7e-38 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of Lsi02G027520 vs. TAIR 10
Match: AT1G52790.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 117.5 bits (293), Expect = 5.4e-27 Identity = 46/78 (58.97%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of Lsi02G027520 vs. TAIR 10
Match: AT1G52800.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 98.6 bits (244), Expect = 2.6e-21 Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 0
BLAST of Lsi02G027520 vs. TAIR 10
Match: AT1G80320.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 2.7e-18 Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Lsi02G027520 vs. TAIR 10
Match: AT1G52820.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 1.5e-16 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Lsi02G027520 vs. TAIR 10
Match: AT1G15540.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 4.3e-16 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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