Lsi02G026980 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G026980
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr02: 33384433 .. 33393766 (+)
RNA-Seq ExpressionLsi02G026980
SyntenyLsi02G026980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTATCCACTTCTCGAGTGAGGAATTTGAACTTCAAACTTCTTTTTCGATGGAATCTATCGTGATTGATTGTCACCACCTCAGATACATAGATTGAGCTTTATTTTATTTTTAGGATAACTACTATCACAGACATGGTAATTGGTATGTGTCTTTATCTATTGAGTTAGGTTTAAATTGTTAAAAATAGTTTGACTGAGTTTGTTTGATTAATTATTTTGCAAATATTGAATGAATATTCTATTAAACTATGGTTATAGTGAATTTAAGGTATATTTGAAAGTGATTTTGAAATTGTTAAAACCACTTGTCGTGTTCAAAATCACTCTTAAACATATATTTAATCATTGAAAATCAAATTAAGATATTTTGTTTTACACTTTTAAAACCAATTTTCAAACAAACAAAATTGATTTTCAAATGCATATTTGAGAGTAATTTCAATTATAATGGAAGTGAGTTTAACAATTTCAAAATCACTCTCAACATATGCAATTAATACTTTTTTAAAAATTTCTTTAAGGTGGCTTTTTTTTTAGTGTTTTTAGAATGATTATGATCATCTAATCAATGTATTATGATGACTTTAAAAATGTTTTTGATTGACTAAACACTTTTTTAAGCAACCAAAACAAACATTAGAAAGACATCTTTTCAGACTAAAAAAAAAATATGCCAAAGCTGCTAATTCACGAGCAGCTTTGTTCTATTCTCCATAAATTTTTACAAGAACAGAAAAATATTCATCGAGACAGGAAAAGAAGGAACCCTAAACATTTTTGTGAGATGTGGTTGGTTGTGATTCAAGTCAAAGAAGAGATCCTAGTTTAGACGTATCCAATTATTCATTTTTTTAAGAAAAACAAAACACGAAACTTTTTCATAAGAAAAACGTGTCTGAATTTGTGGTTTCATTTTCTCTCCCCCCAAGAGTCTTGCTTACGAGTCACGGTTTTGTCCCAATACAAAAGAAAAATACTAATTAAGGCCCTTAATTGTTTTAATTAAGGGTAAAATGGAATCTTTTTAATAAGAAAATCATGTCCAACTTTTGTTTTTATTCATTATCTTTCCTATTTACCAATGCAAACAAAATATTTGAGATGACTATCTAAAATGTAACTTTAAAGTTATTAATAAATTGAAATGCTTCAAAATGTTCAATCTAAATATAACTTAATTGATTAAGACATATATTCTTGATCAACGGATTCGAGATTTGAATCCAATAATTGCTTCAAAATATATCATAACAAGAGAAAAAAAAAACTTATTTGATATATTGATAGAATAAAATTTTGAATATAGTGAACTAAACAAATTTGTAACTAAAAAACTTATTTGATATATTGATATAATCAATTTTGAATATAGTGAACTAAACAAATTTGTAAATAATTTTTTTTTAAAAAAAATATGAATTAAAGGGTTGTTTTCAAAAATGAAAAAAATATCAAACTATTTACAAATATAGAAAAATTCGCTAATAGATAAGGTTAGACTTCTATCACTGAAGAATTTTTTTTATATTTGTAAATAGTTTGATATTTTTTCTACTTATAATAATTTATCTGAATTAAAAATATTTTAAAAATATTAAAATAAGAAGTATATCAAACTCATCCTAAATATCTTATGCACTCATCTACAAAGTTTTCCTCATCTTTGGATTCCCATTAGGAGAGAGATTATCAGAACCTAGAGAGAGAGAGAGAGTTCCCGAAAGAAGAAAGAGAGGTTGTTGAAAGAAACTATAGAATGAAGGAATAACAATGTGAAAGAATTTTTTAAAAACGGAAAAAATGAAAATTAAATAGTTCTCTATTTTAGTTTATGAGCTTTCATATTATTCCAGGTAGGGTCTCTAGATTTCAAACATTATATATGGTTTGCTTAATTCAACCTCTTTGAGGACCATTTGACTTTTTATTTTTGATTCTTCTAAGTTTCTATGTTTTGTCATTTGTTTTCTAAAACCAAACAAGTCTTGAAATCTAAAAAAAAAAAAAAAATGGTTTTCAAAAACTTTATTTTGTATTTAGAATTTAGCTAGGAATTCAAGTGTTACTTTAAGAAATGTAAAAATCATAATTGAAAAGTTGAGAAAAAACAAGCATAAATTTCAAAAAATTATAAAGGGAATTGTTATCAAAAGGCATGTTTACCTAAAAGAATATTTGAAGCCCCGTGCTATATATTGGTATTAATTAACTACATAGACTAAAAGTAGTATCTTTGGAAATTTTAGAAACTAAAATAGGATATTAAAAAATTTAGGTCCGAGTAACCATTTTGATTTTAATTTTTTGTTTTTGAAATTTATGCTTGTTTTCTCCTAAATTTCATACTATGGTTTTCATATTTCTTGAGAAACACTTGAATCCTTAGTTAAAATTAAAAAACAAAATAAATAAACCTAGATGGAAGTAGTGTTTATAAGTTAGATTAAAAAAAAGCAAATGATTACTAAATGGAGGCCTAAGAATCAAAATAAAAAGGGATTTAGGACTAGTACGAAAATTCATGAAACAAAATAGGATTCAAACCTAAATAATTCACTATGAATCAACTGGTTGGAAGGGAATTAGAATATCCAAAATAAAGATGCCTTGGAATAGATGGATGAGAAAATCAAGGATAGTTGTAGTTGTAGTTGTAGGATAGTATAGAGATTAATTTAGCAGAGATAAATTAATTGGACAAATTAGTAAGGAATTAAAGAAAATTTAATTTAGGCACCTAAGAACTCCCTTGAAATGGACGCCCTATAATGTATTTTTCTTCCTAATATCCTGTAGCTTCCTAGGTATACCAGGAAGAAATATTCATCAAGGAATTCTTTCATGTATGGGTGATGAAACATTGATGTAAATACATACAAAATATCTATGTTTATACACAATAAAATTACCAGGAATCTTGAGCTGGCAATGCAAAGTCCCGTGTAAAGTTTCAGAAAAACGACCGCAAAGCCTCGATGACCTTCTCGGGCCTGTTTATGATAATAAAAAACTTAAAACAATATAGAGAATCTAACATGAGCATAGTTCAACTGACATAAAGCATGTATTGTCAACCAAGAGATAAGAAATTCGAATTTCCTACTCCGTATATTGTTCAACAACTCAAAAAAGTATAACAGTATAGAGAAAGTTATATGCAATGCAAATGATGAATAATTTTACCAGTCCTCTTGGGGCATATGGCCAGCTCCTTCAATTAACTTGAGCTGGATTGTTGTTGAGTTCTGTTTTTGAAACTCTTCTGCAATGGACTGAGGTAGATACTTGTCTGAAATGCCCCAAAGAACAAGACTTGGTTTGTCCCATCTGTAAGCCACAGGAATTTTTGTTATTTATTTATGATGAGCTTTTTTTCATGTGACCTTAATTTCTCATCCTGACATTAAAGCAGAGAAAAAAAGTCACCAGCATACTCTGAACCATTTTATTACAGCCTGACATTCATGCATTTCTGGAGGTGGTTTGGTTTCAGAATGTGTTTAATTTTTACGGTAAATTTTTAGGGCCGCAAATGAAAGTTAAAAGCTTATAAACCTTACTTGAATCTATAAAAAAATTTATTTTTATTTTTTGCTTAGTTACTTTTTACAAATGTTTTTAAAATCTAAATTAAGTTTTCAAAAAAAAAATTATAAAACTTGATTTTGCGTATTGAATTTGGTCGATAATTTTAATGTTTCCTTGAGAAAGCCGAAAGGTGAAGACTCGTAGTGAGAAAACAAGCCTAATTTTCAAAAGTCAAAAACAAAAAACCAAATAGGTTTTTTAAACATCACATTTTCCCTTTTTTCCAGAACTGCCAAAAAAGAAAAAGTTTATCAGATCTTAACAAATTACCATTCCATATCTTAGTTCTAGTATAAAGCTTCTTTTTGTCACTAACTTTTATAAATGTCGATTCTTCTTCTTGTTGTAACATATTCTACTCGAGAGAACTATAAGGCCATTTAGTTCCAAATTTGACATCAATTTGGCACAAGAAATAGACAACAAATCAACATCAGGCCATATGAAATATTTGGTAAGGGCTACGTTAGGAACATTATTAGGATGAATATTATAAATATTATTAAGATGATAGGGACAGAAACTATTTTATGTTAATTTCAGTTTCAACTTTTGTTCCTAACGATGTAGTACTAAAATTTGAAGATAAAGATTAAAATGATTTTTATGTAAAGTTCAACGACCTCAAATGAGATGAAAAATAAGGATTAAACTTTTATTATGAAGAATCAAATGAGTGGTCTCGTTTCTTTTGCGGTTCCCAACTTTTTTAAATGTAGTGTCGAATGATAAATGAAGCGACAGTAACAACTTCATAGAAATACATAATAACATCGAAAAATAGTTAAAAGTAAAGTGAGGAGGTAACAAGAGAAAAACTGACCTCCCAGAAGCAAAGCCAGAAGTTATCCGACTTAATATATCATTGAAATTAGCTTTTCTTGCAGCTTCAAGCAAAGCTGAAAAGAAAGGCAAATTAGGGAAGTATACAGTTGCCCGTTTGCAGGATTTCTCCATGGGGCATTGATTACTTGAATAATTTCTCATGGCCCAGGGAATTAATCTTCTGTCATGAGAAACTGATTTTAACTGGTTTTATTTGATAAAAGAGCATGTTACCTAAACTTTAATTGATTAGGGTAATTTAGAGTTATTGTATTGATCGAGTTTAATTGATAAATTTTGCTACTTACCAAAACCAGGTCCTCCACTAGACAAGTATGGAAGTCTATAAACATCGGCCTTTTCCAGCTTTAATACGTATCTACAAGCAGAGAGAATACTCTGTCAGCGTACGCTTACAGTGGATTCCAAAATCAAGAGAAAAACTATTGGATGTATCGTGTACATACATGAAAGTAGAGATGCGGAACATTCTAAATGTACACTTCAATCGTACATCTCAGAAAGAAAACTTCATCGACATGCCCAGATAAGATATCTATCTCATAATCTAAGAATTTGAAATCCCAAAATTTGAAAGAGTAAGGGCCAAAATATGTGAATATTCATCAATTTTATTTTTCACTAGAAGTGTAATTTACAAATCGATCTAACATCTTCTAAAAAAAATAGCAAAAAATGTTAAATTGCAAATTTGGTCCTTATGATCAGAAGAAAGTCATAATTTAGTCTCTCTGGCTTATAATTAGAATTTAGTTCTCGTAAATAGTCCTTAAGGTGTTGTTTGGGGCGCTGAGTTGGTTATTATAGTCTGTAGGTTATAATAGTGGGTGTTTGGGGTGTAAACTATTTTAGTCTGATTACAAATAAGGAGAGAGGATGGTTACAAAATAGTAAACACAATAGACAGTGAGAGTTCTCAAATAGTTTTACGGTAGTAAAGTGTGAATTATAATAATTGGGAACTTCAACAATCCAAAGCAAGTTGGAAGCCCAAACGTCCCCTAAATTCTTAGAGACCATTTAAGAGGATTTTATCAAACCACATTGACTATTTATGAGGTTTTATCAAACCATAAAGACCAAATTCTAACTTAATTACACCAGAAAAAAAAAATACAAAACCAAGATGTTGAGGTTTTACTACTTGCATGATGATTATGGCTCAGCTCACCCCAATAGTTCTTGGGAGTCTGTGTCCAATCCAAGAGACAACTAAAATGGTTATTAAGTTTTTAATTTGGGCTTGAAATTGAAACCTTAGAGAGGGTATCTTCAACATCCCAGGCCCTTGGTACTTAACAAATATCTTATTATATCACAAGTTGCAACACACAACAAACTGTAATTCAGTTATTTTTGTGTACAGAAGAGACTGGTGCACTGAACCTTTTGTGTCACTAAAAGATAATTCATGTATTAATAGTCGCTAAATCTATTGTGCTCTTGTATGAACTCGTAGTCATAACTCTTAATTTAAGTCTAATCTGTATATTGATCTTTTCTGTGGATTTATGGAGATTCTAACGACTCTGTAGTTAGAATTACATCACAGAACAGAAGAATAATCCAGAGTCAAGATGATCTTAGATACATACGCGCTACCTGCTTCAATAAAACGTTCGGCCATAACTGCATTCTGGCATGTAAATTCACCAAACAGGGGGATCCTATACACAGGGTAAACAAACTGAAACATATCAGGAACAAGAACTTGAAAAGAAAAAAAAAAGAAAGGTATTTCAAAGATCAGAAGTGAAACATAAGATTGATTCTTCTTAATAAATTGACGGATGCTTTGCTAGCAAATCAGAACTAAACGGGAAGCAAAAAATTTAGATGACTCAATTAGTTATTTCATCGTATGCCTAAATGAACATTCTGAAACTCATGGTCAAGATTTGAGGAAATGAGTCAAATATAAACAGTTGCTCTATTACATTTTCAATGCATTAGTTAGAATCATCATATTGAACCTTAGCTGTTGAAATAACCCAGGAACAGGAGAAGAAACCGTTAAAGGACTGTTTAGAATGGATATCTTTGAAATCCTGCTCTGATTTTTCAAGGCCCATGTCAATCCATATGATCCCACAAGAAAACCCTTCAAGAAAGATTGTGTTAAGGTTATTAATGCAGTAGTAGATGTATATTGTTGAGCAGTCAATCTTCATGACACAAGCATGTCAGCTTGGCTATATGTCTAACTTTCTATGAAATACTCTTTCCTGGAAAATTCAGATCTAACCTGAATCACAAGGTTAAAGGGTGTGTTGACATCGAGCACGTCAAGTAGTTTATCCAGTTCCTCGTGGTACTCTTTTTCTGTGTCAATTCAAATATCACATATACTACGAAAGAATATATTCAAACTACTAATTACTATAACACGAGTGATTAAACATTGCCAAAACCTGTATAATTAAAGCCATATCCTGGTTGCGGTTTGTCACTGAAACCGAATCCTATCCAATCAGGAGCAAAACAGTGGAATCCAAGAGCAGACAACTAGCCAATACAACAGAAAAAGTGAAATAAGAAAGGTGAAGTTTCAGACAGAAAAGAAATGCTAAGATATAACTTTAAAATTATCGTCAGATTAAGATTGAAATTTAAGGGCACATGGATGGTCTAACTATCCAAACTCAGTCCTGCCAAATTTCAGTTGTAAGAAAAAAAAATGTAAACAAAATGGGTTGAAGAACTGTACAAGTCTTCAATCTCGACTCTTTGGTTGATAAGTTTATGAGTTCCATGGTTTTGAGATTTTGGTAACTTGATAACAAGAAAGTTTAATGCAGTTTTGAACATTATTTTAGCAAGACCTCAGACATAACAACTCGATAGCTATAAGATTGTGTTGGAGCGCCATGAAGGAAGACTATAGTTCCCCGCCGGCTTTTGGCAGACCCTACAAGATCAAAAGATTCTCAATGCTTATAATTGAACCAAATAACTTGGAAGTTGCTGAAATGACATACCTGTCTCTCTAACAAACCATCTGAATTTCCCAGATTTTACGTAAGAGCCATATTCCTTTCCCTTGTCCTCTATTCTCTATTGAAAGACAAACATGTTAGATGCTTTAAAATGCACCATGTGACGCAGATTCAGCTATAAAAAAAAATCCTTGAAAACTACACAACATTGCGAAAGATTGATGAAATAAACAACTTCCGACATAACAACCCGTGAAATTTCTTGACAAAGAATTGTATAAAAATTTTAAACATTATAATAGAACTAGATAATAGATTTCTCTTATTTTTATAGCCCAGGATTTCCATTGTTTTAAACTTCATAGGGCAATCATTTGATGAAAAAAATAAGGTTAAATAACTGGCAACTTTTATGATTGTGACTATTTAGTCTCTAAACTTTCAAAAGCATCCAATACATCCTTGAACTATCAATTTTGTGTATGAAATCCATGAATTATTAAAAAATAAAAATGAAAAAAAAAGAAGGTCAAGTTTTATTATACACAAAATTAAAAATTAAGAATCGTCACAAACTTAAAAGTTCAATGACCTATTAAACACTTTTTGGAGGTTATGATCAACTGGACATAAAATTAAAAGTTTAGGTATATATTCCTATAGTAGACACTTACAAAGTTTGAGGACTAGAGAGACATAAACCTGAAAGTTTAGTGATGCTTGTAATTTAACCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAGCCATCACAACCTTCCCAACACAGTGTAATGGCAACAAATGAAAATTGGAGCTCAAATCTCCCATGACAAATGCTACTCATTTTCAATTGATAGTCCACTTGAACGTAAGAAAAAAAAATAGGTATCATTCACAGTCACGCGTGAGAGAAACACATGAAACACATTGATCCTAAGAACGGAAAAAGAATCAGAGAACAATAAGTCATAGGCGAGTTATCACAATGGACAAGCTCGACCAGATCGGTTCCATGCGTAGCTTGAATCAGTAATTTTCCAAAAAAAACTCACCGATCAATTGACCAATTGGTTATCAGTACGGGGAATTCAATTTTCCGATACATTTACCCGATCGCTGATTTAAAGTTAGTTTTGCTGCCATGGAAAATGAATTGTACTTACATAGAGCATCTGGCCGACATTGCCATCCTCGGCGGGGCTCTCAGGAAGTTGAATCGCACTTCGGCTTGACGGATTGTCAGTGACGAACCCAAACGGATTGAAACCGGAAGAATCGGCGTCGCTATCGCCCGTTTCGTCTTTGCCCTTGGCACTGGCTGTGATTCTTCCCGCCGGTCTGATTCTTGTGGCGGTGGCGGTGGCGGTGAAGTAGCAGTAGGATTTCGTGGAGGCGGAAAGGGAAGAGAGTGGATAAGGCGACGACAGGCTGAGAGGCTGAGAGAGCACAGCCCTGGCCATTGTCTCCATGACAGGTTTTGA

mRNA sequence

ATGAATGATAACTACTATCACAGACATGCTTCAAGCAAAGCTGAAAAGAAAGGCAAATTAGGGAAGTATACAGTTGCCCTTAGAATTACATCACAGAACAGAAGAATAATCCAGAGTCAAGATGATCTTAGATACATACGCGCTACCTGCTTCAATAAAACGTTCGGCCATAACTGCATTCTGGCATGTAAATTCACCAAACAGGGGGATCCTATACACAGGGCCCATGTCAATCCATATGATCCCACAAGAAAACCCTTCAAGAAAGATTGTGTTAAGCAAGACCTCAGACATAACAACTCGATAGCTATAAGATTGTGTTGGAGCGCCATGAAGGAAGACTATAGTTCCCCGCCGGCTTTTGGCAGACCCTACAAGATCAAAAGATTCTCAATGCTTATAATTGAACCAAATAACTTGGAAGTTGCTGAAATGACATACCTTGACGAACCCAAACGGATTGAAACCGGAAGAATCGGCGTCGCTATCGCCCGTTTCGTCTTTGCCCTTGGCACTGGCTGTGATTCTTCCCGCCGGTCTGATTCTTGTGGCGGTGGCGGTGGCGGTGAAGTAGCAGTAGGATTTCGTGGAGGCGGAAAGGGAAGAGAGTGGATAAGGCGACGACAGGCTGAGAGGCTGAGAGAGCACAGCCCTGGCCATTGTCTCCATGACAGGTTTTGA

Coding sequence (CDS)

ATGAATGATAACTACTATCACAGACATGCTTCAAGCAAAGCTGAAAAGAAAGGCAAATTAGGGAAGTATACAGTTGCCCTTAGAATTACATCACAGAACAGAAGAATAATCCAGAGTCAAGATGATCTTAGATACATACGCGCTACCTGCTTCAATAAAACGTTCGGCCATAACTGCATTCTGGCATGTAAATTCACCAAACAGGGGGATCCTATACACAGGGCCCATGTCAATCCATATGATCCCACAAGAAAACCCTTCAAGAAAGATTGTGTTAAGCAAGACCTCAGACATAACAACTCGATAGCTATAAGATTGTGTTGGAGCGCCATGAAGGAAGACTATAGTTCCCCGCCGGCTTTTGGCAGACCCTACAAGATCAAAAGATTCTCAATGCTTATAATTGAACCAAATAACTTGGAAGTTGCTGAAATGACATACCTTGACGAACCCAAACGGATTGAAACCGGAAGAATCGGCGTCGCTATCGCCCGTTTCGTCTTTGCCCTTGGCACTGGCTGTGATTCTTCCCGCCGGTCTGATTCTTGTGGCGGTGGCGGTGGCGGTGAAGTAGCAGTAGGATTTCGTGGAGGCGGAAAGGGAAGAGAGTGGATAAGGCGACGACAGGCTGAGAGGCTGAGAGAGCACAGCCCTGGCCATTGTCTCCATGACAGGTTTTGA

Protein sequence

MNDNYYHRHASSKAEKKGKLGKYTVALRITSQNRRIIQSQDDLRYIRATCFNKTFGHNCILACKFTKQGDPIHRAHVNPYDPTRKPFKKDCVKQDLRHNNSIAIRLCWSAMKEDYSSPPAFGRPYKIKRFSMLIIEPNNLEVAEMTYLDEPKRIETGRIGVAIARFVFALGTGCDSSRRSDSCGGGGGGEVAVGFRGGGKGREWIRRRQAERLREHSPGHCLHDRF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G026980.1Lsi02G026980.1mRNA