Lsi02G026080 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACGTACTCCCAAGTTATCAACTCCATTATTTAAAGGCGTGTAGGGGGTGAAGAAATGGCACAAGATCCGACGGCGAGTTTGGCAGCCATGACGGCGGCGTATAATGCTCCGGTGCTTCTGATAACGGTGATCGCGGCGGCTATAGCTAGTGGCGCTTTGGGCGCCGGTGGGAGCAGCCCTTCTGTGGAGCCAAGTCATAGTTCAGTTCCGTTCAACCGGAGCAGTTTTCCGGCTGGGTTTATCTTCGGAGCTGGCTCCGCCGCTTATCAGGTTCCTTTTTCTTTATCTCTCTCTCTTGTCGTTTTTAAAGTTCCGACATGTCGGCAGCTTTTTCTTTTTCTTTTTTGTTAAATTTATAAAGTGGATAATAATGTTGTTGGTTTTTGCAGTTAGAAGGAGCAGCAAGTATGGATGGAAGAGGTCCAAGTATTTGGGATACTTTCACTAAGAACCACCCAGGTCTCACTTTTCCCATTACCAAAACTTTTCTTCTTAAATTTCAAAACATTTTAAACATAAAAATCAAATTGAAAATATAA ATGTCACGGGGTGAAGAAATGGCACAAGATCCGACGGCGAGTTTGGCAGCCATGACGGCGGCGTATAATGCTCCGGTGCTTCTGATAACGGTGATCGCGGCGGCTATAGCTAGTGGCGCTTTGGGCGCCGGTGGGAGCAGCCCTTCTGTGGAGCCAAGTCATAGTTCAGTTCCGTTCAACCGGAGCAGTTTTCCGGCTGGGTTTATCTTCGGAGCTGGCTCCGCCGCTTATCAGTTAGAAGGAGCAGCAAGTATGGATGGAAGAGGTCCAAGTATTTGGGATACTTTCACTAAGAACCACCCAGGTCTCACTTTTCCCATTACCAAAACTTTTCTTCTTAAATTTCAAAACATTTTAAACATAAAAATCAAATTGAAAATATAA ATGTCACGGGGTGAAGAAATGGCACAAGATCCGACGGCGAGTTTGGCAGCCATGACGGCGGCGTATAATGCTCCGGTGCTTCTGATAACGGTGATCGCGGCGGCTATAGCTAGTGGCGCTTTGGGCGCCGGTGGGAGCAGCCCTTCTGTGGAGCCAAGTCATAGTTCAGTTCCGTTCAACCGGAGCAGTTTTCCGGCTGGGTTTATCTTCGGAGCTGGCTCCGCCGCTTATCAGTTAGAAGGAGCAGCAAGTATGGATGGAAGAGGTCCAAGTATTTGGGATACTTTCACTAAGAACCACCCAGGTCTCACTTTTCCCATTACCAAAACTTTTCTTCTTAAATTTCAAAACATTTTAAACATAAAAATCAAATTGAAAATATAA MSRGEEMAQDPTASLAAMTAAYNAPVLLITVIAAAIASGALGAGGSSPSVEPSHSSVPFNRSSFPAGFIFGAGSAAYQLEGAASMDGRGPSIWDTFTKNHPGLTFPITKTFLLKFQNILNIKIKLKI Homology
BLAST of Lsi02G026080 vs. ExPASy Swiss-Prot
Match: A2SY66 (Vicianin hydrolase (Fragment) OS=Vicia sativa subsp. nigra OX=3909 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 8.1e-16 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy Swiss-Prot
Match: Q42707 (Furostanol glycoside 26-O-beta-glucosidase OS=Hellenia speciosa OX=49577 GN=F26G PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 9.2e-12 Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy Swiss-Prot
Match: B8AVF0 (Beta-glucosidase 12 OS=Oryza sativa subsp. indica OX=39946 GN=BGLU12 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.5e-11 Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy Swiss-Prot
Match: P26204 (Non-cyanogenic beta-glucosidase OS=Trifolium repens OX=3899 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.5e-11 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy Swiss-Prot
Match: Q7XKV4 (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU12 PE=1 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 4.6e-11 Identity = 41/85 (48.24%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy TrEMBL
Match: A0A0A0K9V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428990 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 6.8e-34 Identity = 77/84 (91.67%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy TrEMBL
Match: A0A1S3CFH7 (vicianin hydrolase-like OS=Cucumis melo OX=3656 GN=LOC103499893 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 78/85 (91.76%), Postives = 83/85 (97.65%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy TrEMBL
Match: A0A6J1H6Q8 (vicianin hydrolase-like OS=Cucurbita moschata OX=3662 GN=LOC111460999 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 3.2e-31 Identity = 74/84 (88.10%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy TrEMBL
Match: A0A6J1KSC1 (vicianin hydrolase-like OS=Cucurbita maxima OX=3661 GN=LOC111497798 PE=3 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.7e-30 Identity = 73/84 (86.90%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Lsi02G026080 vs. ExPASy TrEMBL
Match: A0A6J1D5L7 (vicianin hydrolase-like OS=Momordica charantia OX=3673 GN=LOC111017519 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.6e-27 Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 0
BLAST of Lsi02G026080 vs. NCBI nr
Match: XP_004135908.1 (vicianin hydrolase [Cucumis sativus] >KGN45162.1 hypothetical protein Csa_016147 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33 Identity = 77/84 (91.67%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of Lsi02G026080 vs. NCBI nr
Match: XP_008461253.1 (PREDICTED: vicianin hydrolase-like [Cucumis melo]) HSP 1 Score: 149.1 bits (375), Expect = 2.7e-32 Identity = 78/85 (91.76%), Postives = 83/85 (97.65%), Query Frame = 0
BLAST of Lsi02G026080 vs. NCBI nr
Match: XP_023513690.1 (vicianin hydrolase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 145.6 bits (366), Expect = 2.9e-31 Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Lsi02G026080 vs. NCBI nr
Match: KAG7025675.1 (hypothetical protein SDJN02_12173, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145.6 bits (366), Expect = 2.9e-31 Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Lsi02G026080 vs. NCBI nr
Match: KAG6593328.1 (hypothetical protein SDJN03_12804, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145.6 bits (366), Expect = 2.9e-31 Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Lsi02G026080 vs. TAIR 10
Match: AT5G44640.1 (beta glucosidase 13 ) HSP 1 Score: 68.6 bits (166), Expect = 4.3e-12 Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Lsi02G026080 vs. TAIR 10
Match: AT5G42260.1 (beta glucosidase 12 ) HSP 1 Score: 68.2 bits (165), Expect = 5.6e-12 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of Lsi02G026080 vs. TAIR 10
Match: AT2G25630.1 (beta glucosidase 14 ) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Lsi02G026080 vs. TAIR 10
Match: AT2G44480.1 (beta glucosidase 17 ) HSP 1 Score: 66.2 bits (160), Expect = 2.1e-11 Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Lsi02G026080 vs. TAIR 10
Match: AT1G02850.1 (beta glucosidase 11 ) HSP 1 Score: 62.4 bits (150), Expect = 3.0e-10 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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