Lsi02G025740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G025740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein FRA10AC1
Location	chr02: 32183216 .. 32192386 (-)
RNA-Seq Expression	Lsi02G025740
Synteny	Lsi02G025740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCATGAGTCACCAAATCACAGCGAAGTTCATTGATTGGCGCGGCCATGGCGTCGTTCGGCTCTCTGAAGAATGCCATCTTCGAAAGAGAAGAGAGAAAACAGTGCGTTCTCTTGTCCTTAATCTCTCTTAACAAGTCCATAGCTCATTTCCATGGAGGTCTCTCTGTCACTTACTCATAACTGATTTTTTTTCCTTATTCTTGAAAATTTTGCAGACAGTACCAGGCTCATGTGCGAGGGCTCAATGCTTATGATCGCCACAAGAAGTTTATGCATGATTATGGTGTGATTTCTACTTGTTATTCTTTACTTAATCTTCGTGGAGCATTTTTGTTTAATTAATGAGCATTTGCGAGGGAAACAATTAGATTCGTGATTGTGGCTTAATTATACGTTGCTCTAGTTGAATAGTTTTGGCCTATGATCTTATATTTTAACATGACGAATCAGTTGCTAGCAGTGGGGGCGGAATTACTGCTCAATTATGGAAGTGATTGAAGGTTATATTTTAGCTTTGAGCTCATTCGGATTTTGTCTATCGCGGTTGCAAATGGGATAGAGTGACAACATGGCCATTGACCCGTTGCTCTAAGATTTGTTAAACAAAGTTCGTTAAGTTAGCTTATTAGCTAACAGACGGACGTGAAGGAAGCTTGCAAATATTGAGCCCCTTATTTGCATATCCTGGAGTCCTAAAGCAAAAGAATGATGAACAGTTTCCTTCACTAAGATGACAGGAGGCTACAGTCATCCTAACATACAGTTTGATGCAAGATATTTTCAGTTAACCTCGAGATTAGTTCAAGTACATTAAGCATATTACAGACCTCAATTGTGCCTCTGGCCTTTTGGCCTTTTAGCCTTGAGCTTCGGAAGGGTATTAAAATTCCTTATTTAGAGACTAGAGTAAGGAAAAAAAGAAAATAAGATAAATCCCAGGAAGTACTAAGAATTCGGTGGAGCATTAGTCCTTATATATGTCAGATGAGGTACTGAAATTTCAATGCAATAATGCAAGTCATACCTTATTTGAGTTATTTTATTTTATTTTATTTATATATATATACAATCTATATATAAAAGATTGTATAATTATATCGTGGCTAAGACAGATTCGTAAATAAATGAACTATGGTAGTCCGCCTTCGTGCTTGTTAAAGTAAAGTTTATCTAGGAAAGGAGAAGAATTTATAAATTTGTGCTAAAATTTAAAGTAATTTTAAGACTTCAATTTGGTTCGTGTATCAAAGTAGACACTTTTCTACATGTTCATACATCTCAAAACTAGCTGATCTATTTATTAAAAAGAAGACTTCAATCTATGACTGTATTTTTACTTTGAACAATCTTTTGGTTAGGCTTATGGATTTTCATATTCATTTTTTTTCTTTTTAGATGGCTATCTTTTATTTTCCCAGGTTGCTATTTGTTATGGGAAGCACTAGAAAGAGAGCTTCATATCTTAAAACATCTGAAATTGTGTCAAATTCATGTCAGTCAATTCAACTAACAATTAGGCGTATCTTCATTTTTTCTAATAGCTCTATAGTCCTCCTTAGTAGGTTACCAGATTGATACTTAAGTTATTTTTTACTATTTGAATTGTGTGGTCTTTATTGGTTGCAGTTCATTTCTACGGGAAAAATAAAACTGGGGAAGAAAAATTTCCTATCAAGACTGATCAAGACACCCTGAGGGAAGGCTACCGGTGTGAACCCACTATTCTTTTTATGACAGTCATAATAAAGTTCCTCATGTTAGCAGTACGTGTGTGACCAGATTAGTGGTGTTTTCAGTAAGAAATAAACTAGGTCGTAGTCAACTGGTAGTGGGTTAGAAATAATTATTTATTATGGACATTGTAAAGTTGATGCAATACTGTGAATAATGTCAACTGTAGATGATAAGTGGATATTTTTGGAAAGATGCGTTTTGCCTCATCATAGGATGTCCATTACTGAGGTTTACACATTATGGATATCTTACTCTATGCATTGATTAAATTTCTTTTTCAATAAGTTTATAGGTTTTTTATTTCCTTTGGAATAAGAAAGTTTATAGGTTATTTTCAATGAATTATTTTCAAGGTTCATTCGTTCGGAAGAAGATGACATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTCAAAGAGTATCCTATGTATAATCTGATACCATAATTTTTGGGCTTTTGCTGTTTGTTATATTGATGAGATAAAACTTTATATCTGGTTTTTCTCTTTGATTTCTATTTGTCAATTTGGTTGTTGAACTTTTGAAAGTTTGATTTTAGTCATTGAACTTTTTTCCATTTTATTTTTTAAAATAAAATTTTAGTTCTTTAATATTTAAAAATTAAAATATCAACTTTAGTCTTTGAACTTTTTTTTAAGAGCTCATATTTACTCTCTATCGTAAAGGACCAAGGTGATAATGTGAATAGGACGTAGATAATAAAGGGGTTAAGTTACATTTCAAGGAATTTAAAGAAAGAGGACTAAAAATGAGATTTTAATGGTTGAATGACCAAAACATTATGTGGGTAGAAATTGAATGAGCAAAATCAAAATTTAAAAGTTTAGGGGCCGAACTACCAGAGACTAGCTAGATAATAGTTTAAAGACAAGAACTACATTGAAATCTGATTAAATTACAGTGTGCCTTAGAAGTACTTATAGCAGTTAAGGTTTTCTTTATGTATAACCGTTTAATAATTTTTTTGACTGTGCATTTCAGGGCTACATTGCTGTTAGAAAAGCTGGAACTGTTTGATTCGATTCCCCATTTAGTTACTTCTTTTAAGCATGTGTCCTATGCTTCAAGATCATAAGAACAAAATTAATAATTTTTTATGCATATGTGAGAGAAAATCAGTTATTGTTGCCTTAAATTCATTGAAGATACTGCATAGCTGATATGACACAATACAAAAGTGGGAAGGTGAGCTATGAAGTTTTCTCATTACTTCGCTTCTATTATCAGTTTCTTACTGAAATTGTCACTTGAATTCAAACTACTATTGAAAATTTTCTTTATAGATTGGTCTCAGGTGGCGTACAGAGAAGGAAGTAATATCTGGGAAAGGTACCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTCTATAATGACCATTCTTTAGTTTCTGCCATCTTTTCTTTCATTTTTTCCTCTTTTTTCTAAAATTTTAATTTTTAACTTTTAGTATGAATTTCCATCATCCTGCTAGTTGACTGTACAATTAGTTTCCTTTTGATGATATCACCTTTTCATTTATTATTTACTTTAGTTTGAATTTCTGTTTCTCTGGCTAATTGGCTGTGTGGTTAGGACTAGGAGCCTTATAAATATTATTCCACTTCTTTAAGTACCTTCTTCATTTTCTTTTTATTCTTAGATATTGAAACTACCTCATTTTTAAATGTGCATATAGAAGTGTATACGCTGGATCTTGCTTTCACAATTTATCTATTGACATTTTATAGTTGAAAAAAGTACCAACTTCCTGTAGGCTGTAATCTTTATCTTTTTCGTTGGGATTTATGCTTGAGCTTTTGCTTGACCACTTTTTCTTCTGTCAGGGCAGTTCATATGTGGAAACAAGCATTGTGATGAGAAGGATGGTTTAGCAAGCTATGAGGTAGTATTAATATATATTCAGATACTAGCTATAACTAGTTGACTACTTCAACATATCGGGTATGATAGAGACTTGATAATGTACAAATAGGCATATTACATATTAATTGGGACTCTGGATGTTAACTGGGTACTGCTTTTATATTGAAAGACACTGGAAGACCTTTGTCTTCTGATTAAACTTTAAAGGCTTATTTGAGGGCAATCAGAGCAGAGGAGAAATATAACATGGATATATTAAGTTTTTGGATTGGACCCATTGTGCAGCGGATTCTGGTACTGCCCATCACATCTCACTACTCTGTTCATGTGAATGAATTGAAAAGATTGTTTTACTTTAGCATAAGCAGATCAAGCTGTTAGGTGTAGTGGTAATATGATATGGTGCCACAGGAAGAAGTTCTGAATTCAATATTTTGTCATTTCTCAGTTTAAGTTAATAATCTATGTAGTAGATTTTGCAAATCAAAATCAATATTCATACCCACATAAGAAAGAATGAATTGAAAAGATTAAGCGTAACATGGTGTATTCGCTTAAAGTTTTTTAGTCTGGTAGTGACATAGCAATAAAATGTAGAACTTCATGAATCATGGACATTGAGTTTGGGCGTTTATCTGTTCTTTCTTTTTCTGCCAACTTCAAAGTACCTGAATTTACTTCTATATGGTCAATTCAATTATTTCCAACAAGTTCCTTGTTTGACTGCAATTTTTCTTTCATGAGGCCAAAGATGGCCTGCTTGGCTAGGAAAAGGACTTTAGAAAAATAAAGAAACATATGCTTGAAATTTTCTTTTAAAAACATAGGATCGATAATGAGAATTTAATGATGGAAATTCATGTGGTTGCAAACTTGCAAGTGGTTAGTGCAGGTGTTATTGGTATTGATGTATACACTATACAGGCGAAATGTCAATTTTTGCTATTGCAACTTTATTTGACATAATGAGATCTCTTGATGAGCTGCGATGTTCAAATTTGGAATGGTTATCCATTTGTTACAGAATCAAAATTCTAAATGATCGATGTTGGCTGCTTCTAGTTACTGCATGTCTTTTTACTTCTCTGTTATTGCAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAACAAGCCCTTGTAAAGCTGGTAACTTGTGAGAGGTTGGTGGTTAGGCTAAGATTCCCGATTCTATTTCTTTTAGTCCCTCGGTGACCATGCTTTGCCATGCTTTTTGTATCAGTACTTCGATGTGGTTGTATCGTTTTCTAGTTTTTATTTATTATTCTCCATTAGAGCCCTTTCAACTCCATTATATCACTGAAAAGTGAAAACGCTGCTTCTTTCCTAAACTGTGATTTGATCTTATGTAATATCATTGTCTTTTGCCAAATGATTGAAGGATGCTTTTAGATAATACTTGAACATATTGATATTGTTTCTATAGCGTTGTTTCCATAATCATGGGTGATATATTTGGCCAATCCTGTCATTTATTCTTACGTGTTGATTGAAGCCAAACATTTTACATGCTACTTTATCTTTCATAGATATGCAAATCATGGAATGCTGAATTAAATAATTAATTAGGGTCTGAATATATAGTCATTAAATGCAGCTTTGTTAATTCCATTTTGCATGATTTTGAATGTCACGTAGCTGCTGCACGTATTTATAGGCTCCGTTTCTGCTTGGATATGGAGTTGCTGTTTAGTTTCCAACTTTGCATCATTCCATACTTCATAACTTATATTTAGATGGATGTCAAATACAAATATAAAGCAAGCAACTATTTTCACTGAAATATAACTGTTTCTTTGGAATCTAAATTATTCTTTTTATGATTTGTCAAATTGGAATTCTCACCGAGTCCCCTGTTGAAAAACCATTGTCTTTCGATTCAATTTTTCTATTTTCATATTGTCTCCTTACGTTTCTTTGTAAGGTCTATTTACCAATATTTTCTCCCATCTTGAATAAATTGGAATAGATGCTCAAAGAAACTTCACTACAAGAGAAAGAAAGAAAAGGAGAAACAGGAAAGGAAGGAGCAAGAAATGTCCAAAAGGAAGAGGTGCTACTCAGAACTTTTAGGGGGCACTTTTCTGCTTGTCAAGTTTTACAGAAGCTGACTGTTATATTTACTTTTCAGGTCAAGTGATGACAATTCAGATAGTGAGGATGAAGGGAGCAGAACGAGGAGAAAAGGTCTGATGAAGTGCCCTCTTAAAAATTTGGAGAAGTTATTCAATTGTGTTTGCCAATTTGATACCATCACATATATGAGAGAGATTATTATTACTACTACTATTATTATTATTATTATTTTTTCCTTTTTGTGGATGATATATCTTACGCCAATGAGAGTGGAAGTTACAATCACCGTGTAAAGAAAGTTGAAGTGGTTGATTACAAGAACTTCAAGATATCATGCCCTTTGGACATTTTGTTTTGGAAGGAAACCATTTCCTAGGCTTGGTACCATATTCTCAGGTTCATTTGGTAGTGTTAAAAGTTAGGTCTATAATAGAAATCAGAGAACCATTTCGATAATTTGTAGAACAAGGAAATATAGAGAGATAACCCAAATAGTTAGAGGAGTTTGGAACTTCCCTCTCAGATCAACTCAAGCGTCCTTAGCTAGTGAGTTACACTCTTAATAATCGCATTTGTTTCCTGTTGAATAGACTAGAAACTACTGGCTAGATTGGTAAGAGGATCTTGTGGCTGATACAATAGAGCTTTTATTTGGCTGATTTGGAAGGAAAGAAATGCTATAAATTTTCAAGGCGAAGAAAGAAGCCCAGAAGCATTTTTAGACATTTCCATATTGATGGCTTAAAAGACAATCGTAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTCTTGGGTACAAATTTCTAGCTTTTCACAACTATAGTTTAAACATTCACATATTCAACTGGAGAATTTTTGTAAACTCGTTGGATCGGCTCTCCCTTTTATAACATGTCACATTTCTATCCAAAATAAATAGGCATTTGAATAGTCAGTCTATTAGCAATGAATCTTGCCGTTTCTTTGCAGGAAAGAAGGCCTCAACATCATTTGGGGATCATAAAGCTGATGACAAAGAAGACTTTGATGAATATTTGGAGGGAATGTTTCCATAATAATGTTGATGAATATGGGCCTCAAGACTACACTTCCGACCTCCACGCCAATTATTTTCAGCTATCCGCTTCCTTGAAACCTTTTCAAAGATGACAAATGGCTGTGGTTGTACGTATACACATTTTTTTGGAAATTTATATCTCAACATAAAACATCATGTTCATGTGGTTGTTTTCGAAATTGTTTAATTTTATTGTAGTCTTGTCATGATCTGTATATCTTGTTCTGTTATATGAGCTGTGCGGCGGGGTTTTCTGCTCAGAACCATTTGTATAAAAGCTTCCTTCCCTTTGGGAGTGATAGGAAAATCAAACCGATCAATCGAACATTGGTTGGTCGATTTTGAATTATCAGAAAATTCAATGTTCATGCTCAGGCAGAGATGTTCAGGGGTGGGGCAAGACAGAGAAGACTTCACCGCCCCGTTCCTGTCCTCACTCCCTATTTCAATTTTCATTCCCGTGAAATTTCTTGTAAGAATTGGGGCGAGGATGGTATATTAAATATGTCATTTTCAGTACACATTTTATTCAAAGAAAACACTACAAAATTCAATAACATTTTATGTGCGAAAATATAATTAAAATCTTTAATCTTCATGGTTTCTAGAAGTTGAAATTTAAATGTCCTTAAC

mRNA sequence

CTTCATGAGTCACCAAATCACAGCGAAGTTCATTGATTGGCGCGGCCATGGCGTCGTTCGGCTCTCTGAAGAATGCCATCTTCGAAAGAGAAGAGAGAAAACAACAGTACCAGGCTCATGTGCGAGGGCTCAATGCTTATGATCGCCACAAGAAGTTTATGCATGATTATGTTAACCTCGAGATTAGTTCAAGTACATTAAGCATATTACAGACCTCAATTGTGCCTCTGGCCTTTTGGCCTTTTAGCCTTGAGCTTCGGAAGGTTCATTTCTACGGGAAAAATAAAACTGGGGAAGAAAAATTTCCTATCAAGACTGATCAAGACACCCTGAGGGAAGGCTACCGGTTCATTCGTTCGGAAGAAGATGACATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTCAAAGAGTATCCTATGTGGCGTACAGAGAAGGAAGTAATATCTGGGAAAGGGCAGTTCATATGTGGAAACAAGCATTGTGATGAGAAGGATGGTTTAGCAAGCTATGAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAACAAGCCCTTGTAAAGCTGGTAACTTGTGAGAGGTCAAGTGATGACAATTCAGATAGTGAGGATGAAGGGAGCAGAACGAGGAGAAAAGGAAAGAAGGCCTCAACATCATTTGGGGATCATAAAGCTGATGACAAAGAAGACTTTGATGAATATTTGGAGGGAATGTTTCCATAATAATGTTGATGAATATGGGCCTCAAGACTACACTTCCGACCTCCACGCCAATTATTTTCAGCTATCCGCTTCCTTGAAACCTTTTCAAAGATGACAAATGGCTGTGGTTGTACGTATACACATTTTTTTGGAAATTTATATCTCAACATAAAACATCATGTTCATGTGGTTGTTTTCGAAATTGTTTAATTTTATTGTAGTCTTGTCATGATCTGTATATCTTGTTCTGTTATATGAGCTGTGCGGCGGGGTTTTCTGCTCAGAACCATTTGTATAAAAGCTTCCTTCCCTTTGGGAGTGATAGGAAAATCAAACCGATCAATCGAACATTGGTTGGTCGATTTTGAATTATCAGAAAATTCAATGTTCATGCTCAGGCAGAGATGTTCAGGGGTGGGGCAAGACAGAGAAGACTTCACCGCCCCGTTCCTGTCCTCACTCCCTATTTCAATTTTCATTCCCGTGAAATTTCTTGTAAGAATTGGGGCGAGGATGGTATATTAAATATGTCATTTTCAGTACACATTTTATTCAAAGAAAACACTACAAAATTCAATAACATTTTATGTGCGAAAATATAATTAAAATCTTTAATCTTCATGGTTTCTAGAAGTTGAAATTTAAATGTCCTTAAC

Coding sequence (CDS)

ATGGCGTCGTTCGGCTCTCTGAAGAATGCCATCTTCGAAAGAGAAGAGAGAAAACAACAGTACCAGGCTCATGTGCGAGGGCTCAATGCTTATGATCGCCACAAGAAGTTTATGCATGATTATGTTAACCTCGAGATTAGTTCAAGTACATTAAGCATATTACAGACCTCAATTGTGCCTCTGGCCTTTTGGCCTTTTAGCCTTGAGCTTCGGAAGGTTCATTTCTACGGGAAAAATAAAACTGGGGAAGAAAAATTTCCTATCAAGACTGATCAAGACACCCTGAGGGAAGGCTACCGGTTCATTCGTTCGGAAGAAGATGACATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTCAAAGAGTATCCTATGTGGCGTACAGAGAAGGAAGTAATATCTGGGAAAGGGCAGTTCATATGTGGAAACAAGCATTGTGATGAGAAGGATGGTTTAGCAAGCTATGAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAACAAGCCCTTGTAAAGCTGGTAACTTGTGAGAGGTCAAGTGATGACAATTCAGATAGTGAGGATGAAGGGAGCAGAACGAGGAGAAAAGGAAAGAAGGCCTCAACATCATTTGGGGATCATAAAGCTGATGACAAAGAAGACTTTGATGAATATTTGGAGGGAATGTTTCCATAA

Protein sequence

MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVPLAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPMWRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCERSSDDNSDSEDEGSRTRRKGKKASTSFGDHKADDKEDFDEYLEGMFP

Homology

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BLAST of Lsi02G025740 vs. ExPASy Swiss-Prot
Match: Q70Z53 (Protein FRA10AC1 OS=Homo sapiens OX=9606 GN=FRA10AC1 PE=1 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32
Identity = 80/195 (41.03%), Postives = 111/195 (56.92%), Query Frame = 0


Query: 11  IFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVPLAFWPFSLEL 70
           + +REE + + + H+  ++AY RH KF++DY+                            
Sbjct: 55  LLDREEARNR-RFHLIAMDAYQRHTKFVNDYI---------------------------- 114

Query: 71  RKVHFYGK----NKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLF 130
             +++ GK     + GE     KTD D +RE +RF+ +EED+MD +WE++L K+YYDKLF
Sbjct: 115 --LYYGGKKEDFKRLGEND---KTDLDVIRENHRFLWNEEDEMDMTWEKRLAKKYYDKLF 174

Query: 131 KEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFSYFEAGE 188
           KEY +              WR EKEVISGKGQF CGNK+CD+K+GL S+EVNF Y E GE
Sbjct: 175 KEYCIADLSKYKENKFGFRWRVEKEVISGKGQFFCGNKYCDKKEGLKSWEVNFGYIEHGE 215

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BLAST of Lsi02G025740 vs. ExPASy Swiss-Prot
Match: Q8BP78 (Protein FRA10AC1 homolog OS=Mus musculus OX=10090 GN=Fra10ac1 PE=1 SV=3)

HSP 1 Score: 136.0 bits (341), Expect = 5.6e-31
Identity = 79/195 (40.51%), Postives = 109/195 (55.90%), Query Frame = 0


Query: 11  IFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVPLAFWPFSLEL 70
           + +REE + + + H+  ++AY RH KF++DY+                            
Sbjct: 55  LLDREEARNR-RFHLIAMDAYQRHTKFVNDYI---------------------------- 114

Query: 71  RKVHFYGK----NKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLF 130
             +++ GK     + GE     KTD D +RE +RF+ +EED+ D +WE++L K+YYDKLF
Sbjct: 115 --LYYGGKREDFKRLGEND---KTDLDVIRENHRFLWNEEDEADMTWEKRLAKKYYDKLF 174

Query: 131 KEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFSYFEAGE 188
           KEY +              WR EKEVISGKGQF CGNK C+EK+GL S+EVNF Y E GE
Sbjct: 175 KEYCIADLSRYKENKFGFRWRIEKEVISGKGQFFCGNKCCNEKEGLRSWEVNFGYTEHGE 215

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BLAST of Lsi02G025740 vs. ExPASy Swiss-Prot
Match: Q5FVF1 (Protein FRA10AC1 homolog OS=Rattus norvegicus OX=10116 GN=Fra10ac1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.7e-30
Identity = 87/239 (36.40%), Postives = 124/239 (51.88%), Query Frame = 0


Query: 11  IFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVPLAFWPFSLEL 70
           + +REE + + + H+  ++AY RH KF++DY+                            
Sbjct: 55  LLDREEARNR-RFHLIAMDAYQRHTKFVNDYI---------------------------- 114

Query: 71  RKVHFYGK----NKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLF 130
             +++ GK     + GE     KTD D +RE +RF+ +EED+ D +WE++L K+YYDKLF
Sbjct: 115 --LYYGGKREDFKRLGEND---KTDLDVIRENHRFLWNEEDEADMTWEKRLAKKYYDKLF 174

Query: 131 KEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFSYFEAGE 190
           KEY +              WR EKEVISGKGQF CGNK CDEK+GL S+EVNF Y E GE
Sbjct: 175 KEYCIADLSRYKENKFGFRWRIEKEVISGKGQFFCGNKCCDEKEGLKSWEVNFGYTEHGE 234

Query: 191 NKQALVKLVTCERSS---DDNSDSEDEGSRTRRKGKKASTSFGDHKADDKEDFDEYLEG 229
            + ALVKL  C+  S   + +   ++  S  +R   K  +    HK       +E  +G
Sbjct: 235 KRNALVKLRLCQECSFKLNFHHRRKEIKSTKKRSKTKTESDESPHKNSRSSSSEEASQG 259

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BLAST of Lsi02G025740 vs. ExPASy TrEMBL
Match: A0A1S3CFL8 (protein FRA10AC1 OS=Cucumis melo OX=3656 GN=LOC103499926 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.2e-91
Identity = 189/273 (69.23%), Postives = 194/273 (71.06%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLK AIFEREERKQQYQAHVRGLNAYDRHKKFMHDY                   
Sbjct: 1   MASFGSLKIAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNKTGEEK PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKTGEEKLPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WR EKEVISGKGQFICGNKHCDEK+GLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMTQYKSGKIGLRWRMEKEVISGKGQFICGNKHCDEKNGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTCE----------------------------RSSDDNSDSEDEGS 232
           YFEAGENKQALVKLVTCE                            R SDD+SDSEDEGS
Sbjct: 181 YFEAGENKQALVKLVTCERCSKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGS 240

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BLAST of Lsi02G025740 vs. ExPASy TrEMBL
Match: A0A6J1HB92 (protein FRA10AC1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461232 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 5.1e-88
Identity = 187/274 (68.25%), Postives = 191/274 (69.71%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY                   
Sbjct: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNK+ EE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKSREENFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WR EKEV+SGKGQFICGNKHCDEKDGLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTCE----------------------------RSSDDNSDSEDEGS 232
           YFEAGENKQALVKLVTCE                            R SDD+SDSED GS
Sbjct: 181 YFEAGENKQALVKLVTCERCSKKLHYKRNKEKEKLERMEQEMSKRKRPSDDSSDSEDAGS 240

[Close]

BLAST of Lsi02G025740 vs. ExPASy TrEMBL
Match: A0A6J1KWV6 (protein FRA10AC1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497871 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.5e-87
Identity = 186/274 (67.88%), Postives = 190/274 (69.34%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY                   
Sbjct: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNK+ EE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKSREENFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WR EKEV+SGKGQFICGNKHCDEKDGLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTCE----------------------------RSSDDNSDSEDEGS 232
           YFEAGENKQALVKLVTCE                            R SDD+SDSED GS
Sbjct: 181 YFEAGENKQALVKLVTCERCSKKLHYKRNKEKEKLERMEQEMSKRKRPSDDSSDSEDAGS 240

[Close]

BLAST of Lsi02G025740 vs. ExPASy TrEMBL
Match: A0A6J1DIS1 (protein FRA10AC1 OS=Momordica charantia OX=3673 GN=LOC111020402 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.3e-87
Identity = 185/275 (67.27%), Postives = 191/275 (69.45%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDY                   
Sbjct: 1   MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNK+ EEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMTHYKSGKIGLRWRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTCER-----------------------------SSDDNSDSEDEG 232
           Y EAGENKQALVKLVTCER                             S   +SDSEDEG
Sbjct: 181 YSEAGENKQALVKLVTCERCSKKLHYKRKKEKEKQERMEQELSKRKRPSDGSSSDSEDEG 240

[Close]

BLAST of Lsi02G025740 vs. ExPASy TrEMBL
Match: A0A5A7UTX2 (Protein FRA10AC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00970 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.5e-82
Identity = 171/255 (67.06%), Postives = 177/255 (69.41%), Query Frame = 0


Query: 19  QQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVPLAFWPFSLELRKVHFYGK 78
           +QYQAHVRGLNAYDRHKKFMHDY                               VHFYGK
Sbjct: 19  RQYQAHVRGLNAYDRHKKFMHDY-------------------------------VHFYGK 78

Query: 79  NKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPM------- 138
           NKTGEEK PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY +       
Sbjct: 79  NKTGEEKLPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEYCIADMTQYK 138

Query: 139 -------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCE 198
                  WR EKEVISGKGQFICGNKHCDEK+GLASYEVNFSYFEAGENKQALVKLVTCE
Sbjct: 139 SGKIGLRWRMEKEVISGKGQFICGNKHCDEKNGLASYEVNFSYFEAGENKQALVKLVTCE 198

Query: 199 ----------------------------RSSDDNSDSEDEGSRTRRKGKKASTSFGDHKA 232
                                       R SDD+SDSEDEGSRTRRKG KASTSFGDHKA
Sbjct: 199 RCSKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKA 242

[Close]

BLAST of Lsi02G025740 vs. NCBI nr
Match: XP_038898608.1 (protein FRA10AC1 isoform X1 [Benincasa hispida])

HSP 1 Score: 357.8 bits (917), Expect = 6.9e-95
Identity = 195/273 (71.43%), Postives = 197/273 (72.16%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY                   
Sbjct: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNKTG EKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKTGGEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMTQYKSGKIGLRWRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTCE----------------------------RSSDDNSDSEDEGS 232
           YFEAGENKQALVKLVTCE                            RSSDDNSDSEDEGS
Sbjct: 181 YFEAGENKQALVKLVTCERCLKKLHYKRKKEKEKQERKEQDMSKRKRSSDDNSDSEDEGS 240

[Close]

BLAST of Lsi02G025740 vs. NCBI nr
Match: XP_004135932.1 (protein FRA10AC1 isoform X2 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 2.1e-91
Identity = 188/273 (68.86%), Postives = 194/273 (71.06%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY                   
Sbjct: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNKTGEEK PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKTGEEKLPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WR EKEV+SGKGQFICGNKHCDEK GLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMTQYKSGKIGLRWRAEKEVMSGKGQFICGNKHCDEKSGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTC----------------------------ERSSDDNSDSEDEGS 232
           YFEAGENKQALVKLVTC                            +R SDD+SD+EDEGS
Sbjct: 181 YFEAGENKQALVKLVTCGRCSKKLHYKRQKEKEKLERKEQEMSKRKRPSDDSSDTEDEGS 240

[Close]

BLAST of Lsi02G025740 vs. NCBI nr
Match: XP_031745034.1 (protein FRA10AC1 isoform X3 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 2.7e-91
Identity = 188/268 (70.15%), Postives = 192/268 (71.64%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY                   
Sbjct: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNKTGEEK PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKTGEEKLPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPMWRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKL 180
           YYDKLFKE   WR EKEV+SGKGQFICGNKHCDEK GLASYEVNFSYFEAGENKQALVKL
Sbjct: 121 YYDKLFKE---WRAEKEVMSGKGQFICGNKHCDEKSGLASYEVNFSYFEAGENKQALVKL 180

Query: 181 VTCERS-------------------------------------SDDNSDSEDEGSRTRRK 232
           VTC RS                                     SDD+SD+EDEGSRTRRK
Sbjct: 181 VTCGRSVVFFYMPRCSKKLHYKRQKEKEKLERKEQEMSKRKRPSDDSSDTEDEGSRTRRK 234

[Close]

BLAST of Lsi02G025740 vs. NCBI nr
Match: XP_008461295.1 (PREDICTED: protein FRA10AC1 [Cucumis melo])

HSP 1 Score: 345.1 bits (884), Expect = 4.6e-91
Identity = 189/273 (69.23%), Postives = 194/273 (71.06%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLK AIFEREERKQQYQAHVRGLNAYDRHKKFMHDY                   
Sbjct: 1   MASFGSLKIAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNKTGEEK PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKTGEEKLPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WR EKEVISGKGQFICGNKHCDEK+GLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMTQYKSGKIGLRWRMEKEVISGKGQFICGNKHCDEKNGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTCE----------------------------RSSDDNSDSEDEGS 232
           YFEAGENKQALVKLVTCE                            R SDD+SDSEDEGS
Sbjct: 181 YFEAGENKQALVKLVTCERCSKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGS 240

[Close]

BLAST of Lsi02G025740 vs. NCBI nr
Match: XP_031745033.1 (protein FRA10AC1 isoform X1 [Cucumis sativus] >KAE8646402.1 hypothetical protein Csa_015886 [Cucumis sativus])

HSP 1 Score: 343.6 bits (880), Expect = 1.3e-90
Identity = 189/282 (67.02%), Postives = 194/282 (68.79%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY                   
Sbjct: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       VHFYGKNKTGEEK PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR
Sbjct: 61  ------------VHFYGKNKTGEEKLPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WR EKEV+SGKGQFICGNKHCDEK GLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMTQYKSGKIGLRWRAEKEVMSGKGQFICGNKHCDEKSGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTCERS-------------------------------------SDD 232
           YFEAGENKQALVKLVTC RS                                     SDD
Sbjct: 181 YFEAGENKQALVKLVTCGRSVVFFYMPRCSKKLHYKRQKEKEKLERKEQEMSKRKRPSDD 240

[Close]

BLAST of Lsi02G025740 vs. TAIR 10
Match: AT4G15030.1 (CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink). )

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-64
Identity = 145/306 (47.39%), Postives = 174/306 (56.86%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQTSIVP 60
           M S  ++++ I++REERKQQYQAH+RGLNAY+RHKKF+ DY                   
Sbjct: 1   MTSSAAIRSDIYDREERKQQYQAHIRGLNAYERHKKFLKDY------------------- 60

Query: 61  LAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKR 120
                       V FYGK+K  E K P+KTDQDTLREGYRFIRSEEDD+D SWEQ+LVKR
Sbjct: 61  ------------VRFYGKDKPAEVKLPVKTDQDTLREGYRFIRSEEDDLDPSWEQRLVKR 120

Query: 121 YYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYEVNFS 180
           YYDKLFKEY +              WRTEKEV++GKGQF+CG+KHCDEK+GLASYEVNFS
Sbjct: 121 YYDKLFKEYCIADMSRYKTGKMGLRWRTEKEVMTGKGQFMCGSKHCDEKEGLASYEVNFS 180

Query: 181 YFEAGENKQALVKLVTCER-------------------------------SSDDNSDSED 232
           Y EAGE+KQALVKLV CER                                S+D++D E+
Sbjct: 181 YHEAGEDKQALVKLVACERCAEKLYYKKRKEGERSESKEKKKQKRKRSKSHSEDDTDEEE 240

[Close]

BLAST of Lsi02G025740 vs. TAIR 10
Match: AT4G15030.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink). )

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-62
Identity = 144/310 (46.45%), Postives = 174/310 (56.13%), Query Frame = 0


Query: 1   MASFGSLKNAIFEREERK----QQYQAHVRGLNAYDRHKKFMHDYVNLEISSSTLSILQT 60
           M S  ++++ I++REERK    +QYQAH+RGLNAY+RHKKF+ DY               
Sbjct: 1   MTSSAAIRSDIYDREERKHRVCRQYQAHIRGLNAYERHKKFLKDY--------------- 60

Query: 61  SIVPLAFWPFSLELRKVHFYGKNKTGEEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQK 120
                           V FYGK+K  E K P+KTDQDTLREGYRFIRSEEDD+D SWEQ+
Sbjct: 61  ----------------VRFYGKDKPAEVKLPVKTDQDTLREGYRFIRSEEDDLDPSWEQR 120

Query: 121 LVKRYYDKLFKEYPM--------------WRTEKEVISGKGQFICGNKHCDEKDGLASYE 180
           LVKRYYDKLFKEY +              WRTEKEV++GKGQF+CG+KHCDEK+GLASYE
Sbjct: 121 LVKRYYDKLFKEYCIADMSRYKTGKMGLRWRTEKEVMTGKGQFMCGSKHCDEKEGLASYE 180

Query: 181 VNFSYFEAGENKQALVKLVTCER-------------------------------SSDDNS 232
           VNFSY EAGE+KQALVKLV CER                                S+D++
Sbjct: 181 VNFSYHEAGEDKQALVKLVACERCAEKLYYKKRKEGERSESKEKKKQKRKRSKSHSEDDT 240

The following BLAST results are available for this feature:

BLAST of Lsi02G025740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q70Z53	1.0e-32	41.03	Protein FRA10AC1 OS=Homo sapiens OX=9606 GN=FRA10AC1 PE=1 SV=3	[more]
Q8BP78	5.6e-31	40.51	Protein FRA10AC1 homolog OS=Mus musculus OX=10090 GN=Fra10ac1 PE=1 SV=3	[more]
Q5FVF1	4.7e-30	36.40	Protein FRA10AC1 homolog OS=Rattus norvegicus OX=10116 GN=Fra10ac1 PE=1 SV=1	[more]

BLAST of Lsi02G025740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFL8	2.2e-91	69.23	protein FRA10AC1 OS=Cucumis melo OX=3656 GN=LOC103499926 PE=4 SV=1	[more]
A0A6J1HB92	5.1e-88	68.25	protein FRA10AC1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461232 PE=4 S...	[more]
A0A6J1KWV6	1.5e-87	67.88	protein FRA10AC1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497871 PE=4 SV=...	[more]
A0A6J1DIS1	3.3e-87	67.27	protein FRA10AC1 OS=Momordica charantia OX=3673 GN=LOC111020402 PE=4 SV=1	[more]
A0A5A7UTX2	5.5e-82	67.06	Protein FRA10AC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G009...	[more]

BLAST of Lsi02G025740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898608.1	6.9e-95	71.43	protein FRA10AC1 isoform X1 [Benincasa hispida]	[more]
XP_004135932.1	2.1e-91	68.86	protein FRA10AC1 isoform X2 [Cucumis sativus]	[more]
XP_031745034.1	2.7e-91	70.15	protein FRA10AC1 isoform X3 [Cucumis sativus]	[more]
XP_008461295.1	4.6e-91	69.23	PREDICTED: protein FRA10AC1 [Cucumis melo]	[more]
XP_031745033.1	1.3e-90	67.02	protein FRA10AC1 isoform X1 [Cucumis sativus] >KAE8646402.1 hypothetical protein...	[more]

BLAST of Lsi02G025740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15030.1	1.0e-64	47.39	CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (Inte...	[more]
AT4G15030.2	1.6e-62	46.45	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019129	Folate-sensitive fragile site protein Fra10Ac1	PFAM	PF09725	Fra10Ac1	coord: 90..188 e-value: 8.0E-29 score: 100.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..217
None	No IPR available	PANTHER	PTHR11567	ACID PHOSPHATASE-RELATED	coord: 16..186
None	No IPR available	PANTHER	PTHR11567:SF25	PROTEIN FRA10AC1	coord: 16..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G025740.1	Lsi02G025740.1	mRNA