Lsi02G025720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G025720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Nuclear transcription factor Y subunit
Location	chr02: 32168608 .. 32172317 (-)
RNA-Seq Expression	Lsi02G025720
Synteny	Lsi02G025720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGCTCCTCTCCTTTTTTTATTTCCTTCTCTCTGTCATCTTCCACTGGCACTGCAGAGAGAGAGGGAGAGGGAGAGGGAGAAAGAGAGAGAGTAATGGAACTGAGCTAGAAAGCCAGAGCGACCTTGAAGCTAAAGCTCCCTAGGGTTCGATCGTCTGTTTCATAATCACACGACAGTTGTAAGTTGTTTTCCTGCTCTCGCTTGTCTCTGATTTCGTTGCTTACAATCGGAATTTTGATCGGAGCTCGGTTTTATTATTAAGGTTCCTTCACTCCAGAAATTTGTGCTTATTTTTTATATAGTAGCGACGGAATGATAAAATTTAAGGAATACTGTTGGAAATATGAGTTTATAAATGCGGAGAACAGAGTATTACCGGAATTCGATTGCAAAAGTGATTCTGAACTTGAAATCGTCGAGTCGAAGACGCTATCATCTTGTTGAGATAGGAATTTCGCCGTTGAAAATTATGAATCTACTGTTTTTTCTTTTTTTTTTCTTTTTATTTCTCAATTTCTTGTTTGTTTGCTGCATGCTTTTCGGCAACCAGTGATAGACCTTTATAGAGCCTCTGTTTTGGATCTATGGACGTTGCAGAGGTTGAAGTTCCTATAGAGTAAATGGAATAAGATAGATGGAGTTTGTAACGAATATTTAGTGTATTTATTATACTATTTTCTTGCCATAATTTAGTATCTCTTATTATATTATCTAGAATCCCCTGTAATGTATAGTAGATCAGTTGTATGGATCTCTGGGAAGTTTTTGTCAACATTAAATAATCCTCCATCTGGCATGCTGGAGCTCTTTCAATGATTTTGAGGTGCTAGGAATTTTGGGTTGCTTAGGTTTCGAACTGGGTAATATTGTAACCTACTCAAGGGTTATGTGTTCGAATCTTTGGATGAGCTTAATAAGTAAAACACTTGAAGCAGGCTGCGTCACCTCCTCTTTTTGAATGGAGGAGCCGCGCATATCATGGAACTTGGTGGAATAGATTTAGTTGAGAATCTCCCGATGCTGCTGTGTGGTATAAGTAGGAGTGAATTATTTTGTTTCCCTTTTCTTTCTAATTTTCTCCCCTTTTCCGGTGATAGGATAGGTTTTGAACGATGCCATCAAAACCAGAAAATGTAGACCAACAAGTAGCTGATGGGGCGCAGTATTTGCTACAATCGACTAAATACTCTGAGCCTTGGTGGCATGGAGTCGGGAACAATACCATCGCAGGTGAAGAAGCTGCTAAAACATCTTCTGCAGAATACCTGAACGTCACTGTTACCAGTGGAGCAACGCAGTCACAAGCAAATGGTATAAGATGCCCTTTCTGTAAAGTAAATGTCTATGTAGCGGATATGCCACAATTATTGTTAATTTAGTATATTTTTCTATGAATAGGCAATTAAATTGATATATCGAAACTCTTCTTGGTTCAGATGAAAATATTGGGAAAGAAGTCCAGCATGTCAAGTACATTCCGTTTTCTACATCCCCACCCGTGAGCGAACACCTGGATCTAAATTCCCAAATGGAACTTGTAGGCCACTCCATTGTAAGAATTGTCTGTCTCTCTCTGAAACCATTGTAAACGAAGAAATAAACATGAGTAGTGTGCCTAGTTCTTTATTAGTGTGCAGTGAATAATGAATATATTTCTTTCTCAAGAAAAATGGATGTTTGAATTTTTGGACATTGCTTCCCTCTTAACTGGATACAAAAAGGACTTCAAGTATCTCCATTTGCAGGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGTCCAATGCTGGCTTCTTATGGACCACAATCAACGGTATGCTCTGATTTACTTGAATGGCTTCATAATTTCATTTACTACACATATTCTGTTTTTGTTACATATGTTGTTCATTATATAGAATGACACAATCGTCCGTGTTAATTAATTATCAGTTGTGAGGATGGGGATCACACCATCAACTTTTGTGATGTAATTTTTGCCTTATCCATTTGTTTATGATATATGGTTAAAAAAAATTCTGAGTAGAGGCTAAAAATGTCCCTCCCTATCGGTCCTTGTCATGTTTGTTTCTTATGTACAGTTCTCTTTGCAAAGAAATTTGCTTCCTAGTAATTCCTACGAATTTTACTGAACAAGAATGCATATAAAAGATGGGGAATCCTTTTGTACAGACCCTTCTTGCTGATTGACTGTTCAAGAATTATGATTATACTTGATTTTCCTGCAGTTACCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCCGTTTATGTAAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGGGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGGTATAGCCAACATGTGTTCAGGAGAAAATGAAATTGACTCATCGATAAATATATTTTTCAAAACTAAGTGGACCTAAGCGGATATTTGTAGTTAATAAAATAAACTGTGTTATAAATTGTCTTCCAGTTGGTTGCCTATGGGTGGGAGGGTCATTTCATTGCATTGTACAACTACTATTGATGGTCGGTCTTATGCATACCTCACCAGGGCTATTCTTTCATATCGATCGCAGTCACACTCTCTGTTCAATTACATTCCATCGTAGTTGTAAAACATTACTTACTTTTGTGGATATATTTTCCCATTTTGTGCAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAGTGTTATTTCCAATACAAATAGGGAGGAAGACATCAATTCGGGTGCAAACCATAAGACAAAACCTGACAGCGAGGCTGGATCGAAGTACATGGTGACTGACGAAAATGGAATCAAGGATACACTCGATGAGGAGGGCAGAGAGTTCATGACTCAAAATATGCAGATAACACATGCTTTCTTCAACGGAAAATCGAGTGTCCATGGTTTATCTACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCTACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGAGCCATCCCCATCAAATGAAAGTTTCTTGATGGGGAATGGGGCTTCTCCAACACTGTTTAACCAGTTTCAGTGCAGAAAACTTGAATATTCAGTAAGTATGACTGTTGATTCTTGTGAGGCTCTGTTACTGGTTGGCAGTTGAAGGATTTGCCCCCTTTCTGCTTGGAAGAAAACTGCCTTTTGGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTGGTACTCTGAGGTGAGATGGAAGAAGATGAAGAAATGCAGTGCACCAAAGAATGTGGTACACTCACTGCCTATTTCTTTCCTCTTCAATTAATTACCTCTTCTATTACTACGTATGTAGTTCTTCTAATCCTGAATGTGTGTCTCATAAAAACAAAAAAACATTTAAGTGTGCAGACTTTTTATAACTTAATTTAGGTGCAATTGGGTGTTGTATCTATTCAACTTTGTGTGAATGTTTCAGGTGATATATCTTTTCATGTTTGGTGGACTTGCAGACATTAAATATGGAACCTCTCTTTCACCTTCCCTCACTCTCTCCCCCACACACTAGGAGGGTAGATGTCTTAATTTTATAATATTTAGTGAAGACCTCATTATCCTATGACTTA

mRNA sequence

ATTTTGCTCCTCTCCTTTTTTTATTTCCTTCTCTCTGTCATCTTCCACTGGCACTGCAGAGAGAGAGGGAGAGGGAGAGGGAGAAAGAGAGAGAGTAATGGAACTGAGCTAGAAAGCCAGAGCGACCTTGAAGCTAAAGCTCCCTAGGGTTCGATCGTCTGTTTCATAATCACACGACAGTTGATAGGTTTTGAACGATGCCATCAAAACCAGAAAATGTAGACCAACAAGTAGCTGATGGGGCGCAGTATTTGCTACAATCGACTAAATACTCTGAGCCTTGGTGGCATGGAGTCGGGAACAATACCATCGCAGGTGAAGAAGCTGCTAAAACATCTTCTGCAGAATACCTGAACGTCACTGTTACCAGTGGAGCAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTCCAGCATGTCAAGTACATTCCGTTTTCTACATCCCCACCCGTGAGCGAACACCTGGATCTAAATTCCCAAATGGAACTTGTAGGCCACTCCATTGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGTCCAATGCTGGCTTCTTATGGACCACAATCAACGTTACCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCCGTTTATGTAAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGGGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAGTGTTATTTCCAATACAAATAGGGAGGAAGACATCAATTCGGGTGCAAACCATAAGACAAAACCTGACAGCGAGGCTGGATCGAAGTACATGGTGACTGACGAAAATGGAATCAAGGATACACTCGATGAGGAGGGCAGAGAGTTCATGACTCAAAATATGCAGATAACACATGCTTTCTTCAACGGAAAATCGAGTGTCCATGGTTTATCTACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCTACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGAGCCATCCCCATCAAATGAAAGTTTCTTGATGGGGAATGGGGCTTCTCCAACACTGTTTAACCAGTTTCAGTGCAGAAAACTTGAATATTCAGTAAGTATGACTGTTGATTCTTGTGAGGCTCTGTTACTGGTTGGCAGTTGAAGGATTTGCCCCCTTTCTGCTTGGAAGAAAACTGCCTTTTGGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTGGTACTCTGAGGTGAGATGGAAGAAGATGAAGAAATGCAGTGCACCAAAGAATGTGGTACACTCACTGCCTATTTCTTTCCTCTTCAATTAATTACCTCTTCTATTACTACGTATGTAGTTCTTCTAATCCTGAATGTGTGTCTCATAAAAACAAAAAAACATTTAAGTGTGCAGACTTTTTATAACTTAATTTAGGTGCAATTGGGTGTTGTATCTATTCAACTTTGTGTGAATGTTTCAGGTGATATATCTTTTCATGTTTGGTGGACTTGCAGACATTAAATATGGAACCTCTCTTTCACCTTCCCTCACTCTCTCCCCCACACACTAGGAGGGTAGATGTCTTAATTTTATAATATTTAGTGAAGACCTCATTATCCTATGACTTA

Coding sequence (CDS)

ATGCCATCAAAACCAGAAAATGTAGACCAACAAGTAGCTGATGGGGCGCAGTATTTGCTACAATCGACTAAATACTCTGAGCCTTGGTGGCATGGAGTCGGGAACAATACCATCGCAGGTGAAGAAGCTGCTAAAACATCTTCTGCAGAATACCTGAACGTCACTGTTACCAGTGGAGCAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTCCAGCATGTCAAGTACATTCCGTTTTCTACATCCCCACCCGTGAGCGAACACCTGGATCTAAATTCCCAAATGGAACTTGTAGGCCACTCCATTGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGTCCAATGCTGGCTTCTTATGGACCACAATCAACGTTACCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCCGTTTATGTAAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGGGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAGTGTTATTTCCAATACAAATAGGGAGGAAGACATCAATTCGGGTGCAAACCATAAGACAAAACCTGACAGCGAGGCTGGATCGAAGTACATGGTGACTGACGAAAATGGAATCAAGGATACACTCGATGAGGAGGGCAGAGAGTTCATGACTCAAAATATGCAGATAACACATGCTTTCTTCAACGGAAAATCGAGTGTCCATGGTTTATCTACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCTACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGAGCCATCCCCATCAAATGA

Protein sequence

MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQLHESMQVNGAPQRAIPIK

Homology

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BLAST of Lsi02G025720 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.0e-32
Identity = 103/258 (39.92%), Postives = 137/258 (53.10%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWH--GVGNNTIAGEEAAKTSSAEYLNVTVTS 60
           M SK ++   +V       + S+  S   WH      N  +  EA   SS        ++
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALALESN 65

Query: 61  GATQSQANDENIGKEVQHVKYIPFSTSP-PVSEHLDLNSQM------------ELVGHSI 120
           G+      D  + KE Q       +TSP    ++ D N +             +LVGH++
Sbjct: 66  GSKSPSNRDNTVNKESQ------VTTSPQSAGDYSDKNQESLHHGITQPPPHPQLVGHTV 125

Query: 121 -VLTSYPFSDAQYCPMLASYG--PQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGI 180
              +S P+ D  Y  ++ +YG  P   +P+  G+ H+RMPLP EM +EPV+VNAKQY  I
Sbjct: 126 GWASSNPYQDPYYAGVMGAYGHHPLGFVPY-GGMPHSRMPLPPEMAQEPVFVNAKQYQAI 185

Query: 181 LRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREE 240
           LRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N+  S    EE
Sbjct: 186 LRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTEASKRKAEE 245

[Close]

BLAST of Lsi02G025720 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-30
Identity = 106/281 (37.72%), Postives = 142/281 (50.53%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT- 60
           M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGATQSQANDENIG--KEVQ------HVKYIPFSTSPPVSEHLDLNSQ-----ME 120
              V S +     N EN G  K+ Q       V       + P     +++ Q      E
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 121 LVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAK 180
           LVGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAK
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYL-GMPRERTALPLDMAQEPVYVNAK 180

Query: 181 QYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISN 240
           QY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S 
Sbjct: 181 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SE 240

Query: 241 TNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG 259
               ED       +    + +GS+ + TD N   +TL+  G
Sbjct: 241 VEAGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 270

[Close]

BLAST of Lsi02G025720 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 79/176 (44.89%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 63  SQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNS-QMELVGHSIVLTSYPFSDAQYCPML 122
           S  N+ +  KE    +  P   S   SE +D NS   E + H +    YP+ D  Y  + 
Sbjct: 9   SDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGL----YPYPDPYYRSVF 68

Query: 123 ASYGPQSTLPHIY--------GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE 182
           A    Q+ LPH Y        G+    +PL  +  EEPV+VNAKQYHGILRRRQSRAK E
Sbjct: 69  AQ---QAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLE 128

Query: 183 LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGAN 230
              + IK++KPY+HESRHLHA+RR RG GGRFLN KK N    +   EE+  S  N
Sbjct: 129 ARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKEN---GDHKEEEEATSDEN 174

[Close]

BLAST of Lsi02G025720 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.3e-26
Identity = 70/140 (50.00%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 103 HSIVLTSYPFSDAQYCPMLASYGPQSTLPH--IYGLHHARMPLPLEMEEEPVYVNAKQYH 162
           +S+    YP+ D  Y  + A      T  H  + G+    +PLP +  EEPV+VNAKQYH
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 163 GILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNR 222
           GILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG GGRFLN KK +    +++ 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 223 EEDINSGANHKTKPDSEAGS 241
           EE  N  A       S   S
Sbjct: 171 EEKSNLSAGKSAMAASSGTS 190

[Close]

BLAST of Lsi02G025720 vs. ExPASy Swiss-Prot
Match: Q9M9X4 (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 93/257 (36.19%), Postives = 132/257 (51.36%), Query Frame = 0


Query: 29  WWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGATQSQANDENIGKEVQHVKYIPFSTSPPV 88
           WW   G+  +A E  A  S + +  V V S     Q     + K+     ++ FS     
Sbjct: 18  WWTAFGSQPLAPESLAGDSDS-FAGVKVGSVGETGQ----RVDKQSNSATHLAFSLGDVK 77

Query: 89  SEHL---------DLNSQMELVGHS--IVLTSYPFSDAQYCPMLASYGPQSTLPHIYGLH 148
           S  L          + S    +G S   + T YP+ + QY  ++++YG QS         
Sbjct: 78  SPRLVPKPHGATFSMQSPCLELGFSQPPIYTKYPYGEQQYYGVVSAYGSQS--------- 137

Query: 149 HARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLH 208
              +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLH
Sbjct: 138 RVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLH 197

Query: 209 AMRRARGSGGRFLNTKKPNSVISNTN-REEDINSGANHKTKP-DSEAGSKYMVTDENG-- 266
           A+RR RGSGGRFLNTK  N   S TN ++ D +     + KP  S + +  +V  ENG  
Sbjct: 198 ALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPENGTM 257

[Close]

BLAST of Lsi02G025720 vs. ExPASy TrEMBL
Match: A0A1S3CED9 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499928 PE=3 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 2.5e-162
Identity = 289/317 (91.17%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPS+PENVDQQVAD A+YLLQS+KYSEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGA
Sbjct: 2   MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+V+SNTNREEDINSGANH TKP SE GS
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS 241

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYMVT E GIK+TLDE+ RE MTQNMQITHAFFNGKS+VHGLSTYNSQL DVEGGHLD  
Sbjct: 242 KYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lsi02G025720 vs. ExPASy TrEMBL
Match: A0A5D3CGW1 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00810 PE=3 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 2.5e-162
Identity = 289/317 (91.17%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPS+PENVDQQVAD A+YLLQS+KYSEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGA
Sbjct: 2   MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+V+SNTNREEDINSGANH TKP SE GS
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS 241

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYMVT E GIK+TLDE+ RE MTQNMQITHAFFNGKS+VHGLSTYNSQL DVEGGHLD  
Sbjct: 242 KYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lsi02G025720 vs. ExPASy TrEMBL
Match: A0A0A0K612 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_7G428130 PE=3 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 5.6e-162
Identity = 289/317 (91.17%), Postives = 303/317 (95.58%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPS+PENVDQQVADGA+YLLQSTK+SEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGA
Sbjct: 2   MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+V+SNTNREEDI+S ANH TKP SEA S
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVS 241

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYMVT+E GIK+TLDE+ REFMTQNMQITHAFFNGKS+VHGLSTY+SQL DVEGGHLDQ 
Sbjct: 242 KYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lsi02G025720 vs. ExPASy TrEMBL
Match: A0A6J1GNB7 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111456068 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153
Identity = 274/316 (86.71%), Postives = 291/316 (92.09%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPSKPENVDQQ+ DG++YL+QSTKYS  WW+GVGNNTIAGE+A KT+SA+YLN TV+SG 
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQSQ NDENIGKEVQH+KYIPFS SPPV E LDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 61  TQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L S GPQST PHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+VISNT+REE INSGANH TKP SEAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS 240

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK + HG+STY SQLADVEGGHLDQ 
Sbjct: 241 KYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 316

[Close]

BLAST of Lsi02G025720 vs. ExPASy TrEMBL
Match: A0A6J1JW53 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111488410 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.8e-153
Identity = 274/316 (86.71%), Postives = 290/316 (91.77%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPSKPENVDQQ  DG++YL+QSTKYSE WWHGVGNNTIAGE A KT+S +YLN TV+SG 
Sbjct: 1   MPSKPENVDQQTVDGSKYLVQSTKYSEAWWHGVGNNTIAGENATKTASTDYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQSQANDENIGKEVQH+KYIPFSTSPPV E LDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSTSPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L S GPQST PHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+VISNT+RE+ IN GANH TKP +EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREKGINFGANHPTKPVNEAGS 240

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYMV DENGIKDTL+EE +EFMTQN+QIT AFFNGK + HG+STY SQLADVEG HLDQ 
Sbjct: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGDHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 316

[Close]

BLAST of Lsi02G025720 vs. NCBI nr
Match: XP_008461297.1 (PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo] >XP_008461299.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo] >KAA0058626.1 nuclear transcription factor Y subunit A-9-like [Cucumis melo var. makuwa] >TYK10434.1 nuclear transcription factor Y subunit A-9-like [Cucumis melo var. makuwa])

HSP 1 Score: 581.3 bits (1497), Expect = 5.2e-162
Identity = 289/317 (91.17%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPS+PENVDQQVAD A+YLLQS+KYSEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGA
Sbjct: 2   MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+V+SNTNREEDINSGANH TKP SE GS
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS 241

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYMVT E GIK+TLDE+ RE MTQNMQITHAFFNGKS+VHGLSTYNSQL DVEGGHLD  
Sbjct: 242 KYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lsi02G025720 vs. NCBI nr
Match: XP_004135933.1 (nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus] >KGN45125.1 hypothetical protein Csa_016712 [Cucumis sativus])

HSP 1 Score: 580.1 bits (1494), Expect = 1.2e-161
Identity = 289/317 (91.17%), Postives = 303/317 (95.58%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPS+PENVDQQVADGA+YLLQSTK+SEPWWHGVGNNTIAGE+AAKTSSAEYLNVTV SGA
Sbjct: 2   MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQ QANDENIGKEVQH+KYIPFSTSPPV EHLDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L SYGPQ+TLP IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+V+SNTNREEDI+S ANH TKP SEA S
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVS 241

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYMVT+E GIK+TLDE+ REFMTQNMQITHAFFNGKS+VHGLSTY+SQL DVEGGHLDQ 
Sbjct: 242 KYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lsi02G025720 vs. NCBI nr
Match: XP_038899773.1 (nuclear transcription factor Y subunit A-1-like [Benincasa hispida])

HSP 1 Score: 570.1 bits (1468), Expect = 1.2e-158
Identity = 289/316 (91.46%), Postives = 296/316 (93.67%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPSKPENVDQQVADGA+YLLQSTKYSEPWWHGVGNNTI GE+AAKTSSAEYLNVTVTSGA
Sbjct: 1   MPSKPENVDQQVADGAKYLLQSTKYSEPWWHGVGNNTIIGEDAAKTSSAEYLNVTVTSGA 60

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQSQANDENIGKEVQH+KYIPFSTSPPV EHLD NSQMELVGHSIVLTSYPFSDAQY  M
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSTSPPVGEHLDPNSQMELVGHSIVLTSYPFSDAQYYQM 120

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L SYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI+
Sbjct: 121 LTSYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIR 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+VISNTNREEDINS ANH TKP S A  
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTNREEDINSSANHLTKPVSGAAP 240

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KY V DEN IKDTL+ EGRE M  NMQITHAFFNGKS+VHGLSTYNSQLADVEGGHLDQ 
Sbjct: 241 KYTVADENEIKDTLN-EGRELMKHNMQITHAFFNGKSNVHGLSTYNSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 315

[Close]

BLAST of Lsi02G025720 vs. NCBI nr
Match: XP_023547827.1 (nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.4 bits (1435), Expect = 8.1e-155
Identity = 276/316 (87.34%), Postives = 293/316 (92.72%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPSKPENVDQQ+ DG++YL+QSTKYSE WWHGVGNNTIAGE+A KT+SA+YLN TV+SG 
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWHGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQSQANDENIGKEVQH+KYIPFSTSPPV E LDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSTSPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L S GPQST PHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+VISNT+REE INSG NH TKP +EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGTNHSTKPVNEAGS 240

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK + HG+STY SQLADVEGGHLDQ 
Sbjct: 241 KYMGADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 316

[Close]

BLAST of Lsi02G025720 vs. NCBI nr
Match: KAG7014245.1 (Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 555.4 bits (1430), Expect = 3.1e-154
Identity = 276/316 (87.34%), Postives = 292/316 (92.41%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWHGVGNNTIAGEEAAKTSSAEYLNVTVTSGA 60
           MPSKPENVDQQ+ DG++YL+QSTKYSE WW+GVGNN IAGE+A KT+SAEYLN TV+SG 
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHVKYIPFSTSPPVSEHLDLNSQMELVGHSIVLTSYPFSDAQYCPM 120
           TQSQANDENIGKEVQH+KYIPFS SPPV E LDLNSQMELVGHSIVLTSYPFSDAQYC M
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LASYGPQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           L S GPQST PHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREEDINSGANHKTKPDSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+VISNT+REE INSGANH TKP  EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGS 240

Query: 241 KYMVTDENGIKDTLDEEGREFMTQNMQITHAFFNGKSSVHGLSTYNSQLADVEGGHLDQL 300
           KYMV DENGIKDTL+EE +EFMTQN+QIT AFFNGK + HG+STY SQLADVEGGHLDQ 
Sbjct: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 316

[Close]

BLAST of Lsi02G025720 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 139.0 bits (349), Expect = 6.4e-33
Identity = 103/258 (39.92%), Postives = 137/258 (53.10%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWWH--GVGNNTIAGEEAAKTSSAEYLNVTVTS 60
           M SK ++   +V       + S+  S   WH      N  +  EA   SS        ++
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALALESN 65

Query: 61  GATQSQANDENIGKEVQHVKYIPFSTSP-PVSEHLDLNSQM------------ELVGHSI 120
           G+      D  + KE Q       +TSP    ++ D N +             +LVGH++
Sbjct: 66  GSKSPSNRDNTVNKESQ------VTTSPQSAGDYSDKNQESLHHGITQPPPHPQLVGHTV 125

Query: 121 -VLTSYPFSDAQYCPMLASYG--PQSTLPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGI 180
              +S P+ D  Y  ++ +YG  P   +P+  G+ H+RMPLP EM +EPV+VNAKQY  I
Sbjct: 126 GWASSNPYQDPYYAGVMGAYGHHPLGFVPY-GGMPHSRMPLPPEMAQEPVFVNAKQYQAI 185

Query: 181 LRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNTNREE 240
           LRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N+  S    EE
Sbjct: 186 LRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTEASKRKAEE 245

[Close]

BLAST of Lsi02G025720 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-31
Identity = 106/281 (37.72%), Postives = 142/281 (50.53%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT- 60
           M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGATQSQANDENIG--KEVQ------HVKYIPFSTSPPVSEHLDLNSQ-----ME 120
              V S +     N EN G  K+ Q       V       + P     +++ Q      E
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 121 LVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAK 180
           LVGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAK
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYL-GMPRERTALPLDMAQEPVYVNAK 180

Query: 181 QYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISN 240
           QY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S 
Sbjct: 181 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SE 240

Query: 241 TNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG 259
               ED       +    + +GS+ + TD N   +TL+  G
Sbjct: 241 VEAGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 270

[Close]

BLAST of Lsi02G025720 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-31
Identity = 106/281 (37.72%), Postives = 142/281 (50.53%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT- 60
           M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGATQSQANDENIG--KEVQ------HVKYIPFSTSPPVSEHLDLNSQ-----ME 120
              V S +     N EN G  K+ Q       V       + P     +++ Q      E
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 121 LVGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAK 180
           LVGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAK
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYL-GMPRERTALPLDMAQEPVYVNAK 180

Query: 181 QYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISN 240
           QY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S 
Sbjct: 181 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SE 240

Query: 241 TNREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG 259
               ED       +    + +GS+ + TD N   +TL+  G
Sbjct: 241 VEAGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 270

[Close]

BLAST of Lsi02G025720 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 133.7 bits (335), Expect = 2.7e-31
Identity = 106/280 (37.86%), Postives = 140/280 (50.00%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT- 60
           M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGATQSQANDENIG--KEVQHV------KYIPFSTSPPVS----EHLDLNSQMEL 120
              V S +     N EN G  K+ Q         +      P +S        L    EL
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPPEL 120

Query: 121 VGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQ 180
           VGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAKQ
Sbjct: 121 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYL-GMPRERTALPLDMAQEPVYVNAKQ 180

Query: 181 YHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNT 240
           Y GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S  
Sbjct: 181 YEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SEV 240

Query: 241 NREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG 259
              ED       +    + +GS+ + TD N   +TL+  G
Sbjct: 241 EAGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 269

[Close]

BLAST of Lsi02G025720 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 133.7 bits (335), Expect = 2.7e-31
Identity = 106/280 (37.86%), Postives = 140/280 (50.00%), Query Frame = 0


Query: 1   MPSKPENVDQQVADGAQYLLQSTKYSEPWW----HGVGNNTIAGEEAAKTSSAEYLNVT- 60
           M SKP   +++  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGATQSQANDENIG--KEVQHV------KYIPFSTSPPVS----EHLDLNSQMEL 120
              V S +     N EN G  K+ Q         +      P +S        L    EL
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPPEL 120

Query: 121 VGHSIVLTSYPFSDAQYCPMLASYGPQST--LPHIYGLHHARMPLPLEMEEEPVYVNAKQ 180
           VGH I     P+ D  Y  ++ +YG Q     P++ G+   R  LPL+M +EPVYVNAKQ
Sbjct: 121 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYL-GMPRERTALPLDMAQEPVYVNAKQ 180

Query: 181 YHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNT 240
           Y GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S  
Sbjct: 181 YEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SEV 240

Query: 241 NREEDINSGANHKTKPDSEAGSKYMVTDENGIKDTLDEEG 259
              ED       +    + +GS+ + TD N   +TL+  G
Sbjct: 241 EAGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 269

The following BLAST results are available for this feature:

BLAST of Lsi02G025720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945M9	9.0e-32	39.92	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	1.7e-30	37.72	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.9e-26	44.89	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	4.3e-26	50.00	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9M9X4	1.3e-25	36.19	Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Lsi02G025720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CED9	2.5e-162	91.17	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499928 P...	[more]
A0A5D3CGW1	2.5e-162	91.17	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0K612	5.6e-162	91.17	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_7G42813...	[more]
A0A6J1GNB7	1.3e-153	86.71	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1JW53	2.8e-153	86.71	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114884...	[more]

BLAST of Lsi02G025720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461297.1	5.2e-162	91.17	PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo] >XP_00...	[more]
XP_004135933.1	1.2e-161	91.17	nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus] >KGN4512...	[more]
XP_038899773.1	1.2e-158	91.46	nuclear transcription factor Y subunit A-1-like [Benincasa hispida]	[more]
XP_023547827.1	8.1e-155	87.34	nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp...	[more]
KAG7014245.1	3.1e-154	87.34	Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lsi02G025720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20910.1	6.4e-33	39.92	nuclear factor Y, subunit A9	[more]
AT5G12840.1	1.2e-31	37.72	nuclear factor Y, subunit A1	[more]
AT5G12840.3	1.2e-31	37.72	nuclear factor Y, subunit A1	[more]
AT5G12840.2	2.7e-31	37.86	nuclear factor Y, subunit A1	[more]
AT5G12840.4	2.7e-31	37.86	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 151..173 score: 77.29 coord: 182..205 score: 81.71
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 147..208 e-value: 7.9E-38 score: 141.7
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 150..205 e-value: 1.1E-26 score: 93.1
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 71..314
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 148..208 score: 39.152382
None	No IPR available	GENE3D	6.10.250.2430		coord: 148..209 e-value: 8.3E-32 score: 111.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..223
None	No IPR available	PANTHER	PTHR12632:SF57	TRANSCRIPTION FACTOR Y SUBUNIT A-1, PUTATIVE-RELATED	coord: 71..314
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 153..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G025720.1	Lsi02G025720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity