Lsi02G025680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G025680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Polygalacturonase
Location	chr02: 32144517 .. 32150312 (-)
RNA-Seq Expression	Lsi02G025680
Synteny	Lsi02G025680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGATTCAGTTGGTCACCCACAATTCCATCAAAACTTTCCCTACTTCTTCCTTTTTTCCCCCCTCAAACTCCTTTCCCCATTTAATAAACTCCCCGATATAATTCTCATTAACATGTGTTGTCAACTATTCCGTCATCGTTGTTGTCTTCTTCTTCTCTTTCTCATTGTCATTGCTATCTCCGAGTTTTTCTCAGCATGTTCTGGCTCGTATGCTGACGTTAACCCTCTGCTACCGATTAGCAGTGGTGATCATAAGAAAGATCGTGATCAAGAATTCTCAAGCATGTTGAGGACGAGGTTGGAGAAGACCGCACCGTCGCCCGTGGCATCGTCTGAGATATTCAACGTAGATGATTATGGAGCAATGGGTGACGGAGAAGATGATAGTGAGGTGGGTTTTATTTATTATTATTTTTTTTAGAATATAGCATTATAATTGTAGACCTGGGATTGAGCATGATGCTCTAATTTGTAACCTAATAAGGATTGTTTTTATTTCTTCCATTAAAAAAGAAAAAACTACCGATAGAGAAGAGAAGTTACTAATATCTTAATTATTGGAGTTTTTGAATGGAATTAAAGAAGTTGGAAGCTGAAATGTTATGTGTTTAATTATTTCAGGCGTTTAAAGAAGCTTGGAAGGACGCTTGTTCATCTACAAATGGCATTTTGTTGGTTCCCTGTGAAAGAATTTATCATCTTAAGCCAATCACCTTCTCTGGTCCTTGTAACTCTCCTCTTGTATTTAAGGTATATATGTTTTACAAAATCATCTCACTATATTTTTTTAAATATTAAAAACATTTTTTCAGTTTTGAATAGAACAAGCATATAGTTTATATTTGTGATTATTTTACTCTATCTACTTTTAACTTTGTAATAATTTTATATGTAATATTAAATTAATATTAAATTATTTATTTATTTATAAACTATAATGACTAAGTAAAAAAACACATCTAATTAAGCTATTAGAATATTAAAAATATATACAATAATCAAATTATTACAAACTATAATTTATAGAATAAATTAGGGAAAAAAAAATACTACTTTAGTTCTCGAATTTTGAAGAACACGTAAATTTAGTCTTTGAATTTTCAAAATATATTTTTTAGTCCTTGAGTTTTTAAGATGATTTTAATCATTTTATTAAATAAATGTTGTTTTTTAATAAATAAGGATAGACTTTTTTTTTTTTTTGGAAAAATAAATAATGATAGACTTGATTTGATTTATGTTGTTTAGTGACGTGTAGATTAATTGATTCAAAATATGTTTCTTTTTTTAATTTTCTTTTTACTATGGTAGGTAGAAAGTTCTAATTTAATTTCTTACGTTGTTTATTTGAATTGATCTAATTATATATATTGCATTAAATAAATAATTGAGTTTCAATCATATTTCTGTTGTCATTAAAAAGTAGAAGTTGGTGCGGCGGAAACATTTTTTTCATATGGTAAATTTATACAAGTCACAATCTTTTTTTAGTAATAAGTCATCATAAATTCCTTTTGTACTTATTAATAATTAATATATTTATTTGATTTAGTTAATGGTTTTTCACTTTGTCCTCTTCTTCACAGCATTACATTTTTCAACTCTCCAATTTTTTTTTTTAAGCTTTTTTTTTAGAAATTATTATAAACGGAAAAATATATTAAACTATCTACAAATTTAGAAAAATTTCAATGTCTATCAGTAATAGATCTCGATAGAAGTCTACCAATCAAGCGATAGAATTAAAATTAGACAGTAAAATTTTTTAAAATTTATAAATAGTTTTGCTCATTTTTTTATATTTGAAAACAACCATTTTTTCACCTATCCGGTTTCATCTTCTTTTTCCCTTTTTATCCCTACATTATATATTTTTGTTTTTGTCTTCTTCTCCTTTTTCACTTATTTTTTATATTATTATTTTTGTTTTGGGTTAAGGTCTATCTCATCTTCACATTAATAACGGTTTCTTTTTTGTTTTTCTTTAATTTTTAACAATTTCAATTTAGGGTTTTTTTTTTTAAAAAAAAAAACTTTAATTCGACAATTTTCTACTTAAAATTTAGGATGCAGGGAAGCATTAGGGTTTAAGGGTTTATATTTTGGTTTAGCAAAAATTTGACTTTATTTTCTTTAATAAAAATCTCATCCCATCCTCTATATTTATGCACTTGCTTCTCCATTTTGTTAATGTATGTCAAAGGGCACGTGCCTATTTCCCTTCATATAATATTGCAATTATTTTAGAAAGGGAGATAGTTTGGTAAACATTTATTGGAAATGATATAGTTATATAAATTCCTATATTTTAAAATGAAACGTTAGCATCGACATAAAATGTAGATATTTTCTTTCATATATAGTTTCAAGAATTTATTTTTATTTATTAAAAATCAATTATAAGTTATTTCTTTGACAATACAATGCTTATTTCAATTATAATAATATTAATTTCTCCTAATAATTAATTCTAATTTTTCCAACATGGAAGATCGAAGGGACAATAAAAGCATCCCCACACATATCAGATTATGAGAAAGACAGAAGGCATTGGATTATATTTCAAAATGTGTCAGGTTTAACAGTGGAAGGTAAAGGCATCATTAATGGAAATGGAAGAAAATGGTGGTTAAATTCATGCAAAGTCAATAAAACTCTTGTGAGTTACTTAATTTTAACTCAATTACAATTTTTTTATATAAAAAAAATCATAATTTATTTTGTGTATTAATGGATTTCCTTTCCCCTTTTTTCTTGTTTTTTCAGCCTTGCAAGGATGCTCCAACAGTAAGTTCATTCTCATATCCATATGAGTAAAAGTTACTAATCATTTACCTTTGCCAAATTGGGGTATTGGGTTGGGATTAACTTGTTTAAAAATTGAATGGATAAAGTTTAACTAAAGAAGTTAATGTTACTGTATATATCGAAATCACTATACAGAATTATGTGGTCTTGAAACTTTGAGAGAAATAAGAACATCTTTAAATAGGTCATTTTGCTAACATACATTATAAAAGAAAAACAAAAAGAAAAAAAAAAAAAAACACTTTTTAAGAAAAAGTGGTGTTACACCATTTTAGTTCTGGAAAACAAAAACTCACCTCCAAAAAAAGTTTCAAGAGAACTTATCAAGAACTTATTTGAAATGATTTTCCAAGTGTCTAAAAAGATATTATTACGTGCTGAAAAATGTTTTAAAGTATTTGGAAAGTCGTTTCAAACAGCTGTGTCCTCATACTTTCATTAACTTTGAAACTGATTTTTCTGTGTCTTCAGGCTGTTACATTCTATCAATGTACCAATCTGAGAGTGGAAGGGCTGAGGTTCAGAAATGCACAAAAGATGCATCTTTCTTTTCAGAAATGCAACGATGTCAAAGCTCTAAATCTCTGGATTTATGCACCAGGAAACAGCCCCAACACTGATGGCATCCATGTCACAGGCACCCAATTCATTGTCATAAAAAACTGTCATATAATGACTGGTATTCATTCCTATTCCCAAAGCTTCAACAAATGCAATCTATAACTAAAACAAAACCTCTTTTTTTTAAAAACTTTGTGGTAGTTCTCAACTTTGTTTTTGGTATTCTTTTGAAGGCGATGACTGCATTTCGATCGTAAGTGGGTCGAAAAATGTCCGAGCAAAGGGCATCACTTGTGGACCAGGACATGGAATCAGGTATCAACAACAAAGCTCCACATACTTAGCTAAACTCTTTCAATGGGGTTTGTATTATTGATTGTGTGTTTTTTTTTTCTTTTCCTCATTTATTTTGCAGTATTGGAAGCTTGGGAGCTGGAAAATCAGAAGCAGAGGTTTCTAATGTGGTGGTTGATACAGCAAGGTTGTCAGGAACATCAAATGGAGTGAGAATTAAAACTTGGCAGGTAAAAAGATTGCTCTAAGTTCTCCGCGAGTAGCTAAAAGAAAACTTGTTTAGACCAGTAAAGATCACTTGTTTTGACTTGAAAATTAAAGCTATTTCACTTTGTTAAGACTCAAAAATCAGAAAATGAAAGAAGTTTACTGGATGCAAAAGCAACAGTGTTTGTGCCTGCTGATTTTGACACCAGAACTTGACCTGCACATTACTTAATCCTCTTAACTTTTTGACCAACTAAATACTTGTATAAGTTTAGGTATCATGTGCTTTTCTAACCTACCAAACAATTAACATTTTTTTCACAAGTCAATGACCTTCTGGAGGGAAGAGGGTAGTTTGGTTTGTTTTCTCCTTTGCCAGTCAGCTAAGAATTTGGCATTGTAAAATCCATAATGGATTGGCCAGGATCCCAAATGAATTGGCTTATTCGAAAAAGCCTTGTTCTTTAGAGAGAATGGGTTCAATCCATGGTGATCACCTACTTAGGATTTAATATCTTATGAGTTTTCTTGGGCCCAAATGTTCTAGAGTTAGGCGGATTGTTATGTGCGATTGATCGAGGTGTGCAATAGCTGGCCCAGACACTCACAAATATTAGGGGGAAAAAAGTATTAAAAAGCTTTCAAACAGCACGAAGCAGTAAGATAAACAGCAAAAAATCCAAGGGGCCATGCCTTGTCACTCTTTCTGTGATTTTCTTTATACTTAAAGAATTGATGTGGCATGTTTCGAGTTTTTTGACCGTTTGAAGGAGAGAATGGTTTCATCCCATCTTTTTCCTTTCCATTGTTTACAAAGAATTTGGAAATTTATTTATTTTTAAGTCTTATTTTGTTGGCTTCTTAACTTCCACATCTTGTTTGCTTTGGATCTTTAGGTTCAATTATAGTCTACAAACTTTGTGCAAGAAATTGTAATACGTCTTATATTTGAAGTCAAATGAAATTGGTTTGATATTAAATATCAAAATTGATACTTAAGTTTTATGAAAGCTTTTACAAATTTATAGACCTAAAACTAGAAGAATTAAAAGCAGAGAGCCCAAAGTGGAAGTATTACCAACCAAAAGAAAATTTCAACATTTCCCTTTTAGAATACACAACTTAACAGCTAGATTTAATGTTCTGATTTGACTTAAATTACCTAATCAAATATCTTTTTAGTTCTAACCCAACAGTTTGGTCTACAGGGAGGAAAAGGGTATGCACAAAACATAATATTCCAGAACATTGTAATGGACAATGTGACCAACCCAATAATCATAGATCAAAACTACTGTGACCAGAAAGAACCATGCACACAACAGGTAAACACTTCAGAAACCGAATTCAGCAACCCAAAACTTCAATATATACAAAAATTTTCTCCTAAGCATTTTATCAAACACATTACAGGCAGAAGCAGTACAAGTGAGTAATGTAATGTACCAGAACATCAGAGGCACAAGCGCTTCAGAAGTGGCTATGAAATTCGATTGCAGCAAAGGCTTCCCATGTCAGGGGATTCTTCTACAAGACATCAATCTGGTTCACAAAGGAAAAAATGACGACAAATCGACCCAAGCTGAAGCTACCTGTAAAAATGTCAAGTTGAAGAACAGAGGAAGGGTTTCTCCACAGTGCGCTGGACGATGAAGATGAAGAAGAAGAAGAAATGGCGGATCCAGTTTTCACAAATGCTTGATTGGGTCACTGTAAATTCAAATAATGAAGAAGGCATTTGGATTAGTGGTTCGTTCTATTAAATTTAGATTTTTTTTTTCTTTTTTGGGATAAACATGTAAAATAGGGTTATAGTTTGGGGTAAACTATTATGACCGATTATAGCACTTATTAAAAAGAAGGCTTAAGCCACAGGCTGGTTGTATTAAGTAACAATAACTGAATAAAGTTGTTTCTTTTCCA

mRNA sequence

ATTTGATTCAGTTGGTCACCCACAATTCCATCAAAACTTTCCCTACTTCTTCCTTTTTTCCCCCCTCAAACTCCTTTCCCCATTTAATAAACTCCCCGATATAATTCTCATTAACATGTGTTGTCAACTATTCCGTCATCGTTGTTGTCTTCTTCTTCTCTTTCTCATTGTCATTGCTATCTCCGAGTTTTTCTCAGCATGTTCTGGCTCGTATGCTGACGTTAACCCTCTGCTACCGATTAGCAGTGGTGATCATAAGAAAGATCGTGATCAAGAATTCTCAAGCATGTTGAGGACGAGGTTGGAGAAGACCGCACCGTCGCCCGTGGCATCGTCTGAGATATTCAACGTAGATGATTATGGAGCAATGGGTGACGGAGAAGATGATAGTGAGGCGTTTAAAGAAGCTTGGAAGGACGCTTGTTCATCTACAAATGGCATTTTGTTGGTTCCCTGTGAAAGAATTTATCATCTTAAGCCAATCACCTTCTCTGGTCCTTGTAACTCTCCTCTTGTATTTAAGAAATGCAACGATGTCAAAGCTCTAAATCTCTGGATTTATGCACCAGGAAACAGCCCCAACACTGATGGCATCCATGTCACAGGCACCCAATTCATTGTCATAAAAAACTGTCATATAATGACTGGCGATGACTGCATTTCGATCGTAAGTGGGTCGAAAAATGTCCGAGCAAAGGGCATCACTTGTGGACCAGGACATGGAATCAGTATTGGAAGCTTGGGAGCTGGAAAATCAGAAGCAGAGGTTTCTAATGTGGTGGTTGATACAGCAAGGTTGTCAGGAACATCAAATGGAGTGAGAATTAAAACTTGGCAGGGAGGAAAAGGGTATGCACAAAACATAATATTCCAGAACATTGTAATGGACAATGTGACCAACCCAATAATCATAGATCAAAACTACTGTGACCAGAAAGAACCATGCACACAACAGGCAGAAGCAGTACAAGTGAGTAATGTAATGTACCAGAACATCAGAGGCACAAGCGCTTCAGAAGTGGCTATGAAATTCGATTGCAGCAAAGGCTTCCCATGTCAGGGGATTCTTCTACAAGACATCAATCTGGTTCACAAAGGAAAAAATGACGACAAATCGACCCAAGCTGAAGCTACCTGTAAAAATGTCAAGTTGAAGAACAGAGGAAGGGTTTCTCCACAGTGCGCTGGACGATGAAGATGAAGAAGAAGAAGAAATGGCGGATCCAGTTTTCACAAATGCTTGATTGGGTCACTGTAAATTCAAATAATGAAGAAGGCATTTGGATTAGTGGTTCGTTCTATTAAATTTAGATTTTTTTTTTCTTTTTTGGGATAAACATGTAAAATAGGGTTATAGTTTGGGGTAAACTATTATGACCGATTATAGCACTTATTAAAAAGAAGGCTTAAGCCACAGGCTGGTTGTATTAAGTAACAATAACTGAATAAAGTTGTTTCTTTTCCA

Coding sequence (CDS)

ATGTGTTGTCAACTATTCCGTCATCGTTGTTGTCTTCTTCTTCTCTTTCTCATTGTCATTGCTATCTCCGAGTTTTTCTCAGCATGTTCTGGCTCGTATGCTGACGTTAACCCTCTGCTACCGATTAGCAGTGGTGATCATAAGAAAGATCGTGATCAAGAATTCTCAAGCATGTTGAGGACGAGGTTGGAGAAGACCGCACCGTCGCCCGTGGCATCGTCTGAGATATTCAACGTAGATGATTATGGAGCAATGGGTGACGGAGAAGATGATAGTGAGGCGTTTAAAGAAGCTTGGAAGGACGCTTGTTCATCTACAAATGGCATTTTGTTGGTTCCCTGTGAAAGAATTTATCATCTTAAGCCAATCACCTTCTCTGGTCCTTGTAACTCTCCTCTTGTATTTAAGAAATGCAACGATGTCAAAGCTCTAAATCTCTGGATTTATGCACCAGGAAACAGCCCCAACACTGATGGCATCCATGTCACAGGCACCCAATTCATTGTCATAAAAAACTGTCATATAATGACTGGCGATGACTGCATTTCGATCGTAAGTGGGTCGAAAAATGTCCGAGCAAAGGGCATCACTTGTGGACCAGGACATGGAATCAGTATTGGAAGCTTGGGAGCTGGAAAATCAGAAGCAGAGGTTTCTAATGTGGTGGTTGATACAGCAAGGTTGTCAGGAACATCAAATGGAGTGAGAATTAAAACTTGGCAGGGAGGAAAAGGGTATGCACAAAACATAATATTCCAGAACATTGTAATGGACAATGTGACCAACCCAATAATCATAGATCAAAACTACTGTGACCAGAAAGAACCATGCACACAACAGGCAGAAGCAGTACAAGTGAGTAATGTAATGTACCAGAACATCAGAGGCACAAGCGCTTCAGAAGTGGCTATGAAATTCGATTGCAGCAAAGGCTTCCCATGTCAGGGGATTCTTCTACAAGACATCAATCTGGTTCACAAAGGAAAAAATGACGACAAATCGACCCAAGCTGAAGCTACCTGTAAAAATGTCAAGTTGAAGAACAGAGGAAGGGTTTCTCCACAGTGCGCTGGACGATGA

Protein sequence

MCCQLFRHRCCLLLLFLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQEFSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLVPCERIYHLKPITFSGPCNSPLVFKKCNDVKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSASEVAMKFDCSKGFPCQGILLQDINLVHKGKNDDKSTQAEATCKNVKLKNRGRVSPQCAGR

Homology

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BLAST of Lsi02G025680 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.5e-87
Identity = 178/375 (47.47%), Postives = 217/375 (57.87%), Query Frame = 0


Query: 73  SSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLVPCERIYHLKPITFSGPCNSP 132
           +S+  NVDD+GA GDG DD++AF++AWK ACSST+  +L+  ++ Y ++PI+FSGPC S 
Sbjct: 86  ASKTVNVDDFGAKGDGRDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSG 145

Query: 133 LV---------------------------------------------------------- 192
           L                                                           
Sbjct: 146 LTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNKAL 205

Query: 193 ---------------------------------FKKCNDVKALNLWIYAPGNSPNTDGIH 252
                                            F  C +V+A NL + AP NSPNTDGIH
Sbjct: 206 PCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIH 265

Query: 253 VTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNV 312
           VTGTQ I I +C I TGDDCISIV+GS+ VR   ITCGPGHGISIGSLG G SEA VS+V
Sbjct: 266 VTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDV 325

Query: 313 VVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQA 357
           VV+ A+L GT+NGVRIKTWQGG G A NI FQN+ M NV NPIIIDQNYCDQ +PC +Q+
Sbjct: 326 VVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQS 385

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BLAST of Lsi02G025680 vs. ExPASy Swiss-Prot
Match: Q9SFB7 (Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 1.4e-84
Identity = 185/438 (42.24%), Postives = 244/438 (55.71%), Query Frame = 0


Query: 15  LFLIVIAISEFFSACSGSYA--DVNPLLPISSGDHKKDRDQEFSSMLRTRLEKT--APSP 74
           + ++ + +  F  +C  SY     + L   S+  ++ +R  +     R    K     +P
Sbjct: 5   IIILSVFLLTFLPSCFSSYPFNHRDDLFMSSNVYYETNRQHQHGHNTRNSHLKNRHGYAP 64

Query: 75  VASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLV-PCERIYHLKPITFSGPC 134
            +S   FNV+ +GA  +G DDS+AF +AW+ ACSST  + +V P  R Y LK +TFSGPC
Sbjct: 65  RSSPRSFNVNTFGAKANGNDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPC 124

Query: 135 NSPLV------------------------------------------------------- 194
            S L+                                                       
Sbjct: 125 KSSLIIFKIYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKIN 184

Query: 195 ------------------------------------FKKCNDVKALNLWIYAPGNSPNTD 254
                                               F+ C +VKALNL + +P +SPNTD
Sbjct: 185 PQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTD 244

Query: 255 GIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEV 314
           GIHV+GTQ I+I++  + TGDDCISIVSGS+NVRA GITCGPGHGISIGSLG   SEA V
Sbjct: 245 GIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYV 304

Query: 315 SNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQKEPCT 357
           SNVVV+ A L GT+NGVRIKTWQGG G A+NIIFQ+I+M NVTNPIII+Q+YCD+ E C 
Sbjct: 305 SNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACP 364

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BLAST of Lsi02G025680 vs. ExPASy Swiss-Prot
Match: Q02096 (Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.5e-79
Identity = 171/359 (47.63%), Postives = 198/359 (55.15%), Query Frame = 0


Query: 78  NVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLVPCERIYHLKPITFSGPCNSP----- 137
           +VDD+GA GDG DD++AF++AWKDACSS   +L+VP  + Y LK ITFSGPC S      
Sbjct: 86  SVDDFGARGDGTDDTKAFEKAWKDACSS-GSVLIVPENKNYLLKQITFSGPCKSDLRVKI 145

Query: 138 ------------------------------------------------------------ 197
                                                                       
Sbjct: 146 RGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEGGGTSNGNGETWWDSSCKRKKSLPCKS 205

Query: 198 ---------------------------LVFKKCNDVKALNLWIYAPGNSPNTDGIHVTGT 257
                                      L F KC DV A NL + AP +SPNTDGIH+TGT
Sbjct: 206 APTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGT 265

Query: 258 QFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNVVVDT 317
           Q I + N  I TGDDCISI SGSK V A  ITCGPGHGISIGSLG   SEA VS V+VD 
Sbjct: 266 QRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDG 325

Query: 318 ARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQAEAVQ 345
             L  T+NG+RIKTWQGG G A+NI FQNIVM NVTNPIIIDQ YCD K+PC +Q  AV+
Sbjct: 326 GNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVK 385

[Close]

BLAST of Lsi02G025680 vs. ExPASy Swiss-Prot
Match: P05117 (Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.2e-77
Identity = 174/443 (39.28%), Postives = 230/443 (51.92%), Query Frame = 0


Query: 15  LFLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQEFSSML---------RTRLEK 74
           + L++I  +   S C  +  D N    +     +++   +F + L            ++K
Sbjct: 8   ILLLIIIFASSISTCRSNVIDDNLFKQVYDNILEQEFAHDFQAYLSYLSKNIESNNNIDK 67

Query: 75  TAPSPVASSEIFNVDDYGAMGDGED-DSEAFKEAWKDACSSTNGI-LLVPCERIYHLKPI 134
              + +   ++ NV  +GA GDG+  D+ AF++AW +ACSS   +  +VP  + Y LK I
Sbjct: 68  VDKNGI---KVINVLSFGAKGDGKTYDNIAFEQAWNEACSSRTPVQFVVPKNKNYLLKQI 127

Query: 135 TFSGPCNSP--------------------------------------------------- 194
           TFSGPC S                                                    
Sbjct: 128 TFSGPCRSSISVKIFGSLEASSKISDYKDRRLWIAFDSVQNLVVGGGGTINGNGQVWWPS 187

Query: 195 ---------------------------------------LVFKKCNDVKALNLWIYAPGN 254
                                                  + F+ C +V A NL I A   
Sbjct: 188 SCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAK 247

Query: 255 SPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGK 314
           SPNTDG+HV+ TQ+I I +  I TGDDCISIVSGS+NV+A  ITCGPGHGISIGSLG+G 
Sbjct: 248 SPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATNITCGPGHGISIGSLGSGN 307

Query: 315 SEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQ 357
           SEA VSNV V+ A++ G  NGVRIKTWQGG G A NI F N+ M +V  PIIIDQNYCD+
Sbjct: 308 SEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDR 367

[Close]

BLAST of Lsi02G025680 vs. ExPASy Swiss-Prot
Match: P48978 (Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.2e-76
Identity = 185/466 (39.70%), Postives = 242/466 (51.93%), Query Frame = 0


Query: 12  LLLLFLIVIAISEFFSACSG-SYADVNPLLPISSGDHKKDRDQEFSS------------- 71
           LL  F++V  +S   ++CSG S+ +VN L   S  DH  D++  ++S             
Sbjct: 7   LLWSFVVVFVVSFSTTSCSGSSFQEVNAL--HSYVDHVDDKESGYNSRAYPSYTDTIEGL 66

Query: 72  ----MLRTRLE-------KTAPSPVASS----EIFNVDDYGAMGDGEDDSEAFKEAWKDA 131
               ++R R +        T    +A+S    +  +VDD+GA G+G DD++AF +AWK A
Sbjct: 67  KVMELIRPRTQLFSSRKLNTITGGIATSSAPAKTISVDDFGAKGNGADDTQAFVKAWKAA 126

Query: 132 CSSTNGILLVPCERIYHLKPITFSGPCNSPL----------------------------- 191
           CSS+  ++LV  ++ Y ++PI FSGPC S L                             
Sbjct: 127 CSSSGAMVLVVPQKNYLVRPIEFSGPCKSQLTLQIYGTIEASEDRSIYKDIDHWLIFDNV 186

Query: 192 ------------------------------------------------------------ 251
                                                                       
Sbjct: 187 QNLLVVGPGTINGNGNIWWKNSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQI 246

Query: 252 --VFKKCNDVKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNV 311
             +F+ C +V+A  L + AP +SPNTDGIHVT TQ I I +  I TGDDCISIVSGS+ V
Sbjct: 247 HVIFQNCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRV 306

Query: 312 RAKGITCGPGHGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNII 357
           +A  ITCGPGHGISIGSLG   SE  VS V V+ A+LSGTSNG+RIKTW+GG G A NI+
Sbjct: 307 QATDITCGPGHGISIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIV 366

[Close]

BLAST of Lsi02G025680 vs. ExPASy TrEMBL
Match: O81246 (Polygalacturonase OS=Cucumis melo OX=3656 GN=MPG3 PE=2 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.8e-157
Identity = 308/461 (66.81%), Postives = 327/461 (70.93%), Query Frame = 0


Query: 1   MCCQLF-RHRCCL-LLLFLIVIAIS-EFFSACSGSYADV-NPLLPISSGDHKKDRDQ--- 60
           MC +L  R  CCL LL FL V+ ++ + FS C GSY DV NPL  ISSGD K+D  Q   
Sbjct: 1   MCRRLLGRRPCCLSLLTFLFVVVVNFDTFSTCFGSYPDVDNPLPSISSGD-KEDYGQHYY 60

Query: 61  -----EFSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNG 120
                EFSSMLRTRLEK   SP+AS EIFNVDDYGAMGDGEDD+EAFKE WKDACSSTN 
Sbjct: 61  EHSSSEFSSMLRTRLEKMVSSPLASPEIFNVDDYGAMGDGEDDTEAFKETWKDACSSTNA 120

Query: 121 ILLVPCERIYHLKPITFSGPCNSPLV---------------------------------- 180
           I LVPC+R+YHLKPITFSGPCNSPL+                                  
Sbjct: 121 IFLVPCDRVYHLKPITFSGPCNSPLLFQIEGTVKASPHISDYEKDRRHWIIFQNLLGLRV 180

Query: 181 ---------------------------------------------------------FKK 240
                                                                    F++
Sbjct: 181 EGKGIINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQQMLLSFQR 240

Query: 241 CNDVKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGIT 300
           CN+VKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNC IMTGDDCISIVSGSKNVRAKGIT
Sbjct: 241 CNNVKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCLIMTGDDCISIVSGSKNVRAKGIT 300

Query: 301 CGPGHGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVM 359
           CGPGHGISIGSLGAGKSEAEVSNVVVDTA+ SGTSNGVRIKTWQGGKGYAQNIIFQNIVM
Sbjct: 301 CGPGHGISIGSLGAGKSEAEVSNVVVDTAKFSGTSNGVRIKTWQGGKGYAQNIIFQNIVM 360

[Close]

BLAST of Lsi02G025680 vs. ExPASy TrEMBL
Match: A0A6J1JXJ9 (polygalacturonase QRT2-like OS=Cucurbita maxima OX=3661 GN=LOC111488393 PE=3 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 6.8e-156
Identity = 303/453 (66.89%), Postives = 321/453 (70.86%), Query Frame = 0


Query: 7   RHRCCLLLL--FLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQE-------FSS 66
           R RC LLLL  FLI I + EFFS CS SYADV+P L I+ GD  KDRDQ+       FSS
Sbjct: 9   RCRCRLLLLLPFLIAIVVFEFFSLCSSSYADVDPPLLINRGD-GKDRDQQYHGYSSKFSS 68

Query: 67  MLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLVPCERI 126
           ML TRLEK APSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWK+ACSSTN I LVP +R 
Sbjct: 69  MLTTRLEKMAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLVPNDRT 128

Query: 127 YHLKPITFSGPCNSPLVFK----------------------------------------- 186
           YHLKPITFSGPCNSP  FK                                         
Sbjct: 129 YHLKPITFSGPCNSPFAFKIEGTIKASPHISDYEKDRRHWIIFENLTEFTVEGKGIINGN 188

Query: 187 --------------------------------------------------KCNDVKALNL 246
                                                             KC++VKALNL
Sbjct: 189 GRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCSNVKALNL 248

Query: 247 WIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISI 306
           WIYAPGNSPNTDGIHVT TQ I+I+NC IMTGDDCISIVSGSKNVRAKGITCGPGHGISI
Sbjct: 249 WIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISI 308

Query: 307 GSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIII 360
           GSLGAGKSEAEVS+VVVDTA+ +GTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIII
Sbjct: 309 GSLGAGKSEAEVSDVVVDTAKFTGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIII 368

[Close]

BLAST of Lsi02G025680 vs. ExPASy TrEMBL
Match: A0A6J1GMX8 (polygalacturonase QRT2-like OS=Cucurbita moschata OX=3662 GN=LOC111455865 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 9.2e-153
Identity = 299/459 (65.14%), Postives = 318/459 (69.28%), Query Frame = 0


Query: 1   MCCQLFRHRCCLLLL--FLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQE---- 60
           MC  L   RC LLLL  FL+ I +  FFS CS SYADV+P   I  GD  KDRD +    
Sbjct: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGD-GKDRDHQHYGY 60

Query: 61  ---FSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILL 120
              FSSML TRLEK A SPVASSEIFNVDDYGAMGDGEDDSEAFKEAWK+ACSSTN I L
Sbjct: 61  SSKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFL 120

Query: 121 VPCERIYHLKPITFSGPCNSPLVFK----------------------------------- 180
           VP +R YHLKPITFSGPCNSP  FK                                   
Sbjct: 121 VPIDRTYHLKPITFSGPCNSPFAFKIEGTIKASPHISDYEKDRRHWIIFENLSEFTVEGK 180

Query: 181 --------------------------------------------------------KCND 240
                                                                   KC++
Sbjct: 181 GTINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCSN 240

Query: 241 VKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGP 300
           VKALNLWIYAPGNSPNTDGIHVT TQ I+I+NC IMTGDDCISIVSGSKNVRAKGITCGP
Sbjct: 241 VKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGP 300

Query: 301 GHGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNV 360
           GHGISIGSLGAGKSEAEVSNVVVDTA+ +GTSNGVRIKTWQGGKGYA+NIIFQNIVMDNV
Sbjct: 301 GHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNV 360

[Close]

BLAST of Lsi02G025680 vs. ExPASy TrEMBL
Match: A0A6J1CWK1 (polygalacturonase QRT2 OS=Momordica charantia OX=3673 GN=LOC111015052 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 2.1e-149
Identity = 291/455 (63.96%), Postives = 318/455 (69.89%), Query Frame = 0


Query: 3   CQLFRHRCCLLLLFLIVIAISEFFSACSGSYADVNPLLPISSGDH-KKDRDQEFSS---- 62
           C+  R RC LLL  L+ + +S+ +S    S+A V+P    SSGD    DR  E+SS    
Sbjct: 2   CRRLRTRCLLLLPLLVTVLVSDLYST---SHAAVDPPPSFSSGDGVDHDRHYEYSSELLD 61

Query: 63  --MLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLVPCE 122
             +L T+LE+ APSPVAS EIFNVDD+GAMGDGEDDSEAFKEAWK+ACSSTNGILLVP E
Sbjct: 62  SFVLTTKLERGAPSPVASPEIFNVDDFGAMGDGEDDSEAFKEAWKEACSSTNGILLVPYE 121

Query: 123 RIYHLKPITFSGPCNSPLVFK--------------------------------------- 182
           R YHLKPITFSGPCNSPLVFK                                       
Sbjct: 122 RTYHLKPITFSGPCNSPLVFKIDGTIKASPHLSDYEKDRRHWIVFQNMEDFTVKGDGTIN 181

Query: 183 ----------------------------------------------------KCNDVKAL 242
                                                               KCN+VKAL
Sbjct: 182 GNGRKWWLNSCKVNKTLPCKDAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCNNVKAL 241

Query: 243 NLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGI 302
           NLWIYAPGNSPNTDGIHVTGTQFIVI+NC IMTGDDCISIVSGSKNVRAKGITCGPGHGI
Sbjct: 242 NLWIYAPGNSPNTDGIHVTGTQFIVIENCLIMTGDDCISIVSGSKNVRAKGITCGPGHGI 301

Query: 303 SIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPI 360
           SIGSLGAGKSEAEVSNVVVDTA+ SGTSNGVRIKTWQGGKGYAQNIIFQNIVM+NV+NPI
Sbjct: 302 SIGSLGAGKSEAEVSNVVVDTAKFSGTSNGVRIKTWQGGKGYAQNIIFQNIVMNNVSNPI 361

[Close]

BLAST of Lsi02G025680 vs. ExPASy TrEMBL
Match: A0A0A0K6J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G427620 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.9e-118
Identity = 237/384 (61.72%), Postives = 255/384 (66.41%), Query Frame = 0


Query: 1   MCCQLFRHRCCLLLL--FLIVIAISEFFSACSGSYADV-NPLLPISSGDHKKD-----RD 60
           MC  L    CCL LL    +V+ I +  S CSGSY DV NPL  ISSGD + D       
Sbjct: 1   MCRPLLGRPCCLSLLTFLFVVVVIFDILSTCSGSYPDVDNPLPSISSGDKEVDGQHYKYS 60

Query: 61  QEFSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLV 120
            EFSSMLRTRLEK A SP+AS EIFNVDDYGAMGDGEDDSEAFKE WKDACSSTN I LV
Sbjct: 61  SEFSSMLRTRLEKMASSPLASPEIFNVDDYGAMGDGEDDSEAFKETWKDACSSTNAIFLV 120

Query: 121 PCERIYHLKPITFSGPCNSPLVFK------------------------------------ 180
           PC+R+YHLKPITF+GPCNSPL+FK                                    
Sbjct: 121 PCDRVYHLKPITFTGPCNSPLLFKIEGTIKASPHISDYEKDRRHWIIFQNLLGLRVEGKG 180

Query: 181 -------------------------------------------------------KCNDV 240
                                                                  KCN+V
Sbjct: 181 IINGNGRKWWLNSCKVNKTLPCKEAPTAVTFFQCTNLRVEGLRFRNAQQMHLSFQKCNNV 240

Query: 241 KALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPG 286
           KALNLWI++PGNSPNTDGIHVTGTQFIVIKNC IMTGDDC+SIVSGSKNVRAKGITCGPG
Sbjct: 241 KALNLWIHSPGNSPNTDGIHVTGTQFIVIKNCLIMTGDDCLSIVSGSKNVRAKGITCGPG 300

[Close]

BLAST of Lsi02G025680 vs. NCBI nr
Match: XP_038899303.1 (polygalacturonase QRT2-like [Benincasa hispida])

HSP 1 Score: 623.6 bits (1607), Expect = 1.0e-174
Identity = 332/458 (72.49%), Postives = 343/458 (74.89%), Query Frame = 0


Query: 1   MCCQLFRHRCCLLLL-FLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQ------ 60
           MCCQLF HRCCLLLL FLI +AISEFFS CSGSYAD++P   ISSGD K+D DQ      
Sbjct: 2   MCCQLFSHRCCLLLLSFLITMAISEFFSTCSGSYADIDPPPSISSGD-KEDHDQHYYEYS 61

Query: 61  -EFSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLV 120
            EFSSMLRTRLEK APSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTN I LV
Sbjct: 62  SEFSSMLRTRLEKMAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNAIFLV 121

Query: 121 PCERIYHLKPITFSGPCNSPLVFK------------------------------------ 180
           PC+RIYHLKPITFSGPCNSPL+FK                                    
Sbjct: 122 PCDRIYHLKPITFSGPCNSPLLFKIEGTIKASPHISDYEKDRRHWIIFQNISNFRVEGKG 181

Query: 181 -------------------------------------------------------KCNDV 240
                                                                  KCN+V
Sbjct: 182 IINGNGRKWWSNSCKVNKTLPCKEAPTAVTFYECTNLRVEGIRFRNAQRMHLSFQKCNNV 241

Query: 241 KALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPG 300
           KALNLWIYAPGNSPNTDGIHVTGTQ IVIKNC IMTGDDCISIVSGSKNVRAKGITCGPG
Sbjct: 242 KALNLWIYAPGNSPNTDGIHVTGTQSIVIKNCLIMTGDDCISIVSGSKNVRAKGITCGPG 301

Query: 301 HGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVT 360
           HGISIGSLGAGKSEAEVSNVVVDTA+ SGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVT
Sbjct: 302 HGISIGSLGAGKSEAEVSNVVVDTAKFSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVT 361

[Close]

BLAST of Lsi02G025680 vs. NCBI nr
Match: KAG7014247.1 (hypothetical protein SDJN02_24422, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 574.7 bits (1480), Expect = 5.5e-160
Identity = 300/398 (75.38%), Postives = 318/398 (79.90%), Query Frame = 0


Query: 1   MCCQLFRHRCCLLLL--FLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQE---- 60
           MC  L   RC LLLL  FL+ I +  FFS CS SYADV+P   I  GD  KDRD +    
Sbjct: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGD-GKDRDHQHYGY 60

Query: 61  ---FSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILL 120
              FSSML TRLEK A SPVASSEIFNVDDYGAMGDGEDDSEAFKEAWK+ACSSTN I L
Sbjct: 61  SSKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFL 120

Query: 121 VPCERIYHLKPITFSGPCNSPLVFK------------------------------KCNDV 180
           VP +R YHLKPITFSGPCNSP  FK                              KC++V
Sbjct: 121 VPIDRTYHLKPITFSGPCNSPFAFKPCKEAPTVFWGSPKRAYAQSGAYHTIVESHKCSNV 180

Query: 181 KALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPG 240
           KALNLWIYAPGNSPNTDGIHVT TQ I+I+NC IMTGDDCISIVSGSKNVRAKGITCGPG
Sbjct: 181 KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG 240

Query: 241 HGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVT 300
           HGISIGSLGAGKSEAEVSNVVVDTA+ +GTSNGVRIKTWQGGKGYA+NIIFQNIVMDNVT
Sbjct: 241 HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT 300

Query: 301 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSASEVAMKFDCSKGFPCQGILLQD 360
           NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTS SEVA+KFDCSK FPCQ ILLQD
Sbjct: 301 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQD 360

[Close]

BLAST of Lsi02G025680 vs. NCBI nr
Match: XP_004135935.1 (polygalacturonase QRT2 isoform X2 [Cucumis sativus] >KAE8646400.1 hypothetical protein Csa_016612 [Cucumis sativus])

HSP 1 Score: 567.4 bits (1461), Expect = 8.8e-158
Identity = 302/458 (65.94%), Postives = 324/458 (70.74%), Query Frame = 0


Query: 1   MCCQLFRHRCCLLLL--FLIVIAISEFFSACSGSYADV-NPLLPISSGDHKKD-----RD 60
           MC  L    CCL LL    +V+ I +  S CSGSY DV NPL  ISSGD + D       
Sbjct: 1   MCRPLLGRPCCLSLLTFLFVVVVIFDILSTCSGSYPDVDNPLPSISSGDKEVDGQHYKYS 60

Query: 61  QEFSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLV 120
            EFSSMLRTRLEK A SP+AS EIFNVDDYGAMGDGEDDSEAFKE WKDACSSTN I LV
Sbjct: 61  SEFSSMLRTRLEKMASSPLASPEIFNVDDYGAMGDGEDDSEAFKETWKDACSSTNAIFLV 120

Query: 121 PCERIYHLKPITFSGPCNSPLVFK------------------------------------ 180
           PC+R+YHLKPITF+GPCNSPL+FK                                    
Sbjct: 121 PCDRVYHLKPITFTGPCNSPLLFKIEGTIKASPHISDYEKDRRHWIIFQNLLGLRVEGKG 180

Query: 181 -------------------------------------------------------KCNDV 240
                                                                  KCN+V
Sbjct: 181 IINGNGRKWWLNSCKVNKTLPCKEAPTAVTFFQCTNLRVEGLRFRNAQQMHLSFQKCNNV 240

Query: 241 KALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPG 300
           KALNLWI++PGNSPNTDGIHVTGTQFIVIKNC IMTGDDC+SIVSGSKNVRAKGITCGPG
Sbjct: 241 KALNLWIHSPGNSPNTDGIHVTGTQFIVIKNCLIMTGDDCLSIVSGSKNVRAKGITCGPG 300

Query: 301 HGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVT 360
           HGISIGSLGAGK+EAEVSNVVVDTA+ SGT+NGVRIKTWQGGKGYAQNIIFQNIVMDNVT
Sbjct: 301 HGISIGSLGAGKTEAEVSNVVVDTAKFSGTTNGVRIKTWQGGKGYAQNIIFQNIVMDNVT 360

[Close]

BLAST of Lsi02G025680 vs. NCBI nr
Match: NP_001284447.1 (polygalacturonase QRT2 precursor [Cucumis melo] >AAC26512.1 polygalacturonase precursor [Cucumis melo])

HSP 1 Score: 564.7 bits (1454), Expect = 5.7e-157
Identity = 308/461 (66.81%), Postives = 327/461 (70.93%), Query Frame = 0


Query: 1   MCCQLF-RHRCCL-LLLFLIVIAIS-EFFSACSGSYADV-NPLLPISSGDHKKDRDQ--- 60
           MC +L  R  CCL LL FL V+ ++ + FS C GSY DV NPL  ISSGD K+D  Q   
Sbjct: 1   MCRRLLGRRPCCLSLLTFLFVVVVNFDTFSTCFGSYPDVDNPLPSISSGD-KEDYGQHYY 60

Query: 61  -----EFSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNG 120
                EFSSMLRTRLEK   SP+AS EIFNVDDYGAMGDGEDD+EAFKE WKDACSSTN 
Sbjct: 61  EHSSSEFSSMLRTRLEKMVSSPLASPEIFNVDDYGAMGDGEDDTEAFKETWKDACSSTNA 120

Query: 121 ILLVPCERIYHLKPITFSGPCNSPLV---------------------------------- 180
           I LVPC+R+YHLKPITFSGPCNSPL+                                  
Sbjct: 121 IFLVPCDRVYHLKPITFSGPCNSPLLFQIEGTVKASPHISDYEKDRRHWIIFQNLLGLRV 180

Query: 181 ---------------------------------------------------------FKK 240
                                                                    F++
Sbjct: 181 EGKGIINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQQMLLSFQR 240

Query: 241 CNDVKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGIT 300
           CN+VKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNC IMTGDDCISIVSGSKNVRAKGIT
Sbjct: 241 CNNVKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCLIMTGDDCISIVSGSKNVRAKGIT 300

Query: 301 CGPGHGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVM 359
           CGPGHGISIGSLGAGKSEAEVSNVVVDTA+ SGTSNGVRIKTWQGGKGYAQNIIFQNIVM
Sbjct: 301 CGPGHGISIGSLGAGKSEAEVSNVVVDTAKFSGTSNGVRIKTWQGGKGYAQNIIFQNIVM 360

[Close]

BLAST of Lsi02G025680 vs. NCBI nr
Match: XP_022991888.1 (polygalacturonase QRT2-like [Cucurbita maxima])

HSP 1 Score: 560.1 bits (1442), Expect = 1.4e-155
Identity = 303/453 (66.89%), Postives = 321/453 (70.86%), Query Frame = 0


Query: 7   RHRCCLLLL--FLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQE-------FSS 66
           R RC LLLL  FLI I + EFFS CS SYADV+P L I+ GD  KDRDQ+       FSS
Sbjct: 9   RCRCRLLLLLPFLIAIVVFEFFSLCSSSYADVDPPLLINRGD-GKDRDQQYHGYSSKFSS 68

Query: 67  MLRTRLEKTAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLVPCERI 126
           ML TRLEK APSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWK+ACSSTN I LVP +R 
Sbjct: 69  MLTTRLEKMAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLVPNDRT 128

Query: 127 YHLKPITFSGPCNSPLVFK----------------------------------------- 186
           YHLKPITFSGPCNSP  FK                                         
Sbjct: 129 YHLKPITFSGPCNSPFAFKIEGTIKASPHISDYEKDRRHWIIFENLTEFTVEGKGIINGN 188

Query: 187 --------------------------------------------------KCNDVKALNL 246
                                                             KC++VKALNL
Sbjct: 189 GRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCSNVKALNL 248

Query: 247 WIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISI 306
           WIYAPGNSPNTDGIHVT TQ I+I+NC IMTGDDCISIVSGSKNVRAKGITCGPGHGISI
Sbjct: 249 WIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISI 308

Query: 307 GSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIII 360
           GSLGAGKSEAEVS+VVVDTA+ +GTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIII
Sbjct: 309 GSLGAGKSEAEVSDVVVDTAKFTGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIII 368

[Close]

BLAST of Lsi02G025680 vs. TAIR 10
Match: AT3G07970.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 314.7 bits (805), Expect = 9.6e-86
Identity = 185/438 (42.24%), Postives = 244/438 (55.71%), Query Frame = 0


Query: 15  LFLIVIAISEFFSACSGSYA--DVNPLLPISSGDHKKDRDQEFSSMLRTRLEKT--APSP 74
           + ++ + +  F  +C  SY     + L   S+  ++ +R  +     R    K     +P
Sbjct: 5   IIILSVFLLTFLPSCFSSYPFNHRDDLFMSSNVYYETNRQHQHGHNTRNSHLKNRHGYAP 64

Query: 75  VASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNGILLV-PCERIYHLKPITFSGPC 134
            +S   FNV+ +GA  +G DDS+AF +AW+ ACSST  + +V P  R Y LK +TFSGPC
Sbjct: 65  RSSPRSFNVNTFGAKANGNDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPC 124

Query: 135 NSPLV------------------------------------------------------- 194
            S L+                                                       
Sbjct: 125 KSSLIIFKIYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKIN 184

Query: 195 ------------------------------------FKKCNDVKALNLWIYAPGNSPNTD 254
                                               F+ C +VKALNL + +P +SPNTD
Sbjct: 185 PQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTD 244

Query: 255 GIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEV 314
           GIHV+GTQ I+I++  + TGDDCISIVSGS+NVRA GITCGPGHGISIGSLG   SEA V
Sbjct: 245 GIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYV 304

Query: 315 SNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQKEPCT 357
           SNVVV+ A L GT+NGVRIKTWQGG G A+NIIFQ+I+M NVTNPIII+Q+YCD+ E C 
Sbjct: 305 SNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACP 364

[Close]

BLAST of Lsi02G025680 vs. TAIR 10
Match: AT2G41850.1 (polygalacturonase abscission zone A. thaliana )

HSP 1 Score: 270.8 bits (691), Expect = 1.6e-72
Identity = 180/446 (40.36%), Postives = 225/446 (50.45%), Query Frame = 0


Query: 9   RCCLLLLFLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQEFSSMLR----TRLE 68
           RC  L+   ++ A+   FS C  S    N        DH   R +  S + R    T L 
Sbjct: 3   RCTNLVTVFLLWALL-MFSWCKASRISPNVY------DHSYKRFKSDSLIKRREDITGLR 62

Query: 69  KTAPSPVASSEIFNVDDYGAMGDGE-DDSEAFKEAWKDACSSTNGI-LLVPCERIYHLKP 128
               + + +    +V D+GA GDG+ DD++AF  AWK ACSS   + LLVP    Y LK 
Sbjct: 63  SFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKS 122

Query: 129 ITFSGPCNSPLV------------------------------------------------ 188
           I  +GPCNS L                                                 
Sbjct: 123 IQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETW 182

Query: 189 --------------------------------------------FKKCNDVKALNLWIYA 248
                                                        +KC++V+  N+ + A
Sbjct: 183 WQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTA 242

Query: 249 PGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLG 308
           P +SPNTDGIH+T TQ I +    I TGDDCISI SGS+NV+   ITCGPGHGISIGSLG
Sbjct: 243 PADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLG 302

Query: 309 AGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNY 357
              S+A VS V VD A+LSGT NGVRIKT+QGG G A NIIFQNI MDNV NPIIIDQ+Y
Sbjct: 303 DDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDY 362

[Close]

BLAST of Lsi02G025680 vs. TAIR 10
Match: AT3G57510.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.7e-69
Identity = 170/450 (37.78%), Postives = 230/450 (51.11%), Query Frame = 0


Query: 9   RCCL-LLLFLIVIAISEFFSACSGSYADVNPLLPISSGDHKKDRDQEFSSMLRTRLEK-- 68
           RCC  L +FL V+ +     A S +         +  G   +D   E  S+L+   +   
Sbjct: 3   RCCRHLAVFLCVLLMLSLCKALSSN---------VDDGYGHEDGSFESDSLLKLNNDDVL 62

Query: 69  ---TAPSPVASSEIFNVDDYGAMGDGE-DDSEAFKEAWKDACSSTNGI--LLVPCERIYH 128
              ++      +   +V ++GA GDG+ DD++AFK+AWK AC STNG+   LVP  + Y 
Sbjct: 63  SLISSDETTLEASTVSVSNFGAKGDGKTDDTQAFKKAWKKAC-STNGVTTFLVPKGKTYL 122

Query: 129 LKPITFSGPCNS------------------------------------------------ 188
           LK   F GPC S                                                
Sbjct: 123 LKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNHWLILEDVNNLSIDGGSTGIINGNG 182

Query: 189 --------------------------------------------PLVFKKCNDVKALNLW 248
                                                        +  +KCN V+  N+ 
Sbjct: 183 KTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVE 242

Query: 249 IYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIG 308
           I APG+SPNTDGIH+T TQ I + N  I TGDDCISI  G++N++   +TCGPGHGISIG
Sbjct: 243 ITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIG 302

Query: 309 SLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIID 358
           SLG   S+A VS + VD A+ S + NGVRIKT+QGG G A+NI FQNI M+NV NPIIID
Sbjct: 303 SLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIID 362

[Close]

BLAST of Lsi02G025680 vs. TAIR 10
Match: AT1G80170.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 236.9 bits (603), Expect = 2.6e-62
Identity = 151/410 (36.83%), Postives = 201/410 (49.02%), Query Frame = 0


Query: 39  LLPISSGDHKKDRDQEFSSMLRTRLEKTAPSPVASSEIFNVDDYGAMGDG-EDDSEAFKE 98
           LL ++S          F S+L+    ++  +   S  + +V ++GA G+G  DD++AF +
Sbjct: 15  LLVVASSLALTANANSFESLLQLPRRQSRSTRPRSERLLHVGNFGAKGNGVTDDTKAFAD 74

Query: 99  AWKDACSS-TNGILLVPCERIYHLKPITFSGPC---------------NSP--------- 158
           AWK ACSS     +LVP      L+PI  SGPC               N P         
Sbjct: 75  AWKTACSSKVKTRILVPENYTCLLRPIDLSGPCKARLTLQISGTIIAPNDPDVWEGLNRR 134

Query: 159 ---------------------------------------------LVFKKCNDVKALN-- 218
                                                        L F KC +++  N  
Sbjct: 135 KWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKHNHSNPCRGAPTALTFHKCKNMRVENLN 194

Query: 219 ---------------------LWIYAPGNSPNTDGIHVTGTQFIVIKNCHIMTGDDCISI 278
                                L + AP  SPNTDGIH++ ++ IVI N  + TGDDCISI
Sbjct: 195 VIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISI 254

Query: 279 VSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNVVVDTARLSGTSNGVRIKTWQGGK 338
           V  S  +    I CGPGHGISIGSLG  KS  EV ++ VDTA +S T+NGVRIKTWQGG 
Sbjct: 255 VKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGS 314

Query: 339 GYAQNIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSASEVAM 355
           G    IIF+NI M+NV+NPIIIDQ YCD ++PC  Q  A+ + N+ + ++RGTSAS+ A+
Sbjct: 315 GLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAI 374

[Close]

BLAST of Lsi02G025680 vs. TAIR 10
Match: AT1G70500.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 231.9 bits (590), Expect = 8.2e-61
Identity = 136/379 (35.88%), Postives = 182/379 (48.02%), Query Frame = 0


Query: 69  SPVASSEIFNVDDYGAMGDG-EDDSEAFKEAWKDACSSTNGILLVPCERIYHLKPITFSG 128
           S  +   + NVD + A GDG  DD++AF  AW  ACS+ N +LLVP  R Y +    F G
Sbjct: 59  SQYSGKNLVNVDSFNASGDGVSDDTQAFIRAWTMACSAPNSVLLVPQGRSYLVNATKFDG 118

Query: 129 PCNSP------------------------------------------------------- 188
           PC                                                          
Sbjct: 119 PCQEKLIIQIDGTIIAPDEPSQWDPKFPRNWLQFSKLQGVVFQGNGVIDGSGTKWWAASC 178

Query: 189 -------------------------------------LVFKKCNDVKALNLWIYAPGNSP 248
                                                L+ ++   V+   + + +PG+SP
Sbjct: 179 KKNKSNPCVGAPTALTIYSSSNVYVRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDSP 238

Query: 249 NTDGIHVTGTQFIVIKNCHIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSE 308
           NTDGIH+T +  +V+++  I TGDDC+SIV+GS  ++ K I CGPGHGISIGSLG G S+
Sbjct: 239 NTDGIHITASTDVVVQDSKISTGDDCVSIVNGSAKIKMKRIYCGPGHGISIGSLGQGHSK 298

Query: 309 AEVSNVVVDTARLSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQKE 355
             V+ VV++TA L  T+NG+RIKTWQGG GY + + F+N+VM +V NPIIIDQ YCD   
Sbjct: 299 GTVTAVVLETAFLKNTTNGLRIKTWQGGNGYVKGVRFENVVMQDVANPIIIDQFYCDSPS 358

The following BLAST results are available for this feature:

BLAST of Lsi02G025680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35336	6.5e-87	47.47	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]
Q9SFB7	1.4e-84	42.24	Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2	[more]
Q02096	6.5e-79	47.63	Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1	[more]
P05117	1.2e-77	39.28	Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1	[more]
P48978	5.2e-76	39.70	Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1	[more]

BLAST of Lsi02G025680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
O81246	2.8e-157	66.81	Polygalacturonase OS=Cucumis melo OX=3656 GN=MPG3 PE=2 SV=1	[more]
A0A6J1JXJ9	6.8e-156	66.89	polygalacturonase QRT2-like OS=Cucurbita maxima OX=3661 GN=LOC111488393 PE=3 SV=...	[more]
A0A6J1GMX8	9.2e-153	65.14	polygalacturonase QRT2-like OS=Cucurbita moschata OX=3662 GN=LOC111455865 PE=3 S...	[more]
A0A6J1CWK1	2.1e-149	63.96	polygalacturonase QRT2 OS=Momordica charantia OX=3673 GN=LOC111015052 PE=3 SV=1	[more]
A0A0A0K6J9	1.9e-118	61.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G427620 PE=3 SV=1	[more]

BLAST of Lsi02G025680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899303.1	1.0e-174	72.49	polygalacturonase QRT2-like [Benincasa hispida]	[more]
KAG7014247.1	5.5e-160	75.38	hypothetical protein SDJN02_24422, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_004135935.1	8.8e-158	65.94	polygalacturonase QRT2 isoform X2 [Cucumis sativus] >KAE8646400.1 hypothetical p...	[more]
NP_001284447.1	5.7e-157	66.81	polygalacturonase QRT2 precursor [Cucumis melo] >AAC26512.1 polygalacturonase pr...	[more]
XP_022991888.1	1.4e-155	66.89	polygalacturonase QRT2-like [Cucurbita maxima]	[more]

BLAST of Lsi02G025680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07970.1	9.6e-86	42.24	Pectin lyase-like superfamily protein	[more]
AT2G41850.1	1.6e-72	40.36	polygalacturonase abscission zone A. thaliana	[more]
AT3G57510.1	1.7e-69	37.78	Pectin lyase-like superfamily protein	[more]
AT1G80170.1	2.6e-62	36.83	Pectin lyase-like superfamily protein	[more]
AT1G70500.1	8.2e-61	35.88	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 218..239 e-value: 1200.0 score: 6.7 coord: 247..268 e-value: 2100.0 score: 4.9 coord: 138..164 e-value: 940.0 score: 7.4 coord: 165..186 e-value: 420.0 score: 9.7
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 122..345 e-value: 3.0E-72 score: 243.4
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 195..208
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 135..356 e-value: 4.7E-73 score: 248.5 coord: 63..134 e-value: 1.6E-12 score: 49.0
None	No IPR available	PANTHER	PTHR31375:SF167	POLYGALACTURONASE QRT2	coord: 40..136
None	No IPR available	PANTHER	PTHR31375:SF167	POLYGALACTURONASE QRT2	coord: 133..346
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 133..346 coord: 40..136
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 66..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G025680.1	Lsi02G025680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity