Lsi02G025330 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G025330
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr02: 31825480 .. 31827923 (+)
RNA-Seq ExpressionLsi02G025330
SyntenyLsi02G025330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGCACTCTCATGCCAAAATAAACCTTCCCTTCGATTCTCTCGCTTCCATGGCCAAATCCTCAAATTCCAAATCCAAGCCTCACTTTTTCCTTTCCTGCTTTGGATTTTCCGGCAATCTTCGCCGCTTTAAGCCCCTCAAATCCGCCGCCGGTCACCGAAAACGGCCGTTTTCTTGGTTGAGGTTTCACTCAAAGCCGCCTCCGCCGGTTCACTCCTCTTTTCCGGCCCAGACGATCCGGTCCATTCCTGATTCCGACCGGCTCTCCTCGATTTCTATTGCTCCGACCGCCACTTGTGAGTCGTCGAATGAAGATTTCGCCGTCGCGGTGTCGGTGGTGACAAATCGAACCGGCGAGGTTATGATCATCGAGCCACAAGAGGTAAGTGAATTTTGCTTCAGAACTTTTTATTCTTGTCTTAAATTAATATGGAAACATGTAATTAAGAATAAAATTTTTCCTTTTTTCTTTTTGAGAAAAGAATAAAATACATATATGTATATATCAGAAAAAAAATTTAGCGTTGGAAAATTTCCTTTCCCAATTATTAAATTGTGGAATAAAATGAGTCCAGTTGCAAGAAGGAAATAATAACAATAAATGTAATTTACTTTGTATTAATTTTCACTAATGGAATAATTCATTATCTTGTTAAAGATATAAAAAATTAATGATTATATTTATTGAATAAGCATGAGAGTAATCAAACTATTGAAAAATTATTCGATGGGTGAACAAAATGTATTTATTTGGGGTGGATGGTTCGAATTTCTAGTATTTTGATATAGTGTATTTGATATTGGTTGAAATATTGCTTTGACGGGATGAAACATCGTTTATAGAATTAAACATATGGTATACGTTGATTTTTTTTTTTCAGTAAAATTGAGCATATTCTATTAAAAGCACTGATTTGATGCAACCTAATTTCATGCTCTTTCTTTTAGATTAAAAAAAAAAAATTAATCATTTTTAAAAAGAAAATAAATTGACATATAACAATTTTTGATGGGCTGCACCCATGTTCTCTCTTCTATTAATATCTTTAAAAGAACTTAAATATGGCATGTCAACTAATGTGTCTAATTACATACTACATAATTTGTGCTACATCAAATTATTCGAATATGTCAGGTAACACTTTGAATTGAGTGGTGATTAAAGACCCAACTTGAGAAAAAATTATTTTTATTTAAACTTTTTTTATATATAAAAATAATTTAAAATATATACCTTCCAACTTTTTCTAAAATGAGTTATTTTTTAAATTAAATATTTAAAAATATATTTCAGACACCCTAAATCGGCAAAAGAAACGAATATCCATCTGAAATTGAATTTATTCAAATTATAAAATCTAATTATATTTATAAAATATGTTAAATTCCAAATTAAGAAATCCTAAACTTTAAAAGGAAAAACACATCTAATAATCTTTTTTAATTTTTTTATTTTGTTTCGGATTTTGAACTTGAAAAATATAATAAGTTACTAAATAACCTTCTTTTAAATTAACGTATTTATTGAATATAAAACTGAACTTTGTGTTTAGAATGACATTAAACTTTTAAATTTATTAGACAGAAGACAAACTTTTAATTTTTTTCTCTAATAAATTTAGGAACTTTAAAAAGTGTTAGATACAAGTCAACAAATATTAGACACAAATTTAAAAAGTGTTAGATACAAGTCAACAAATATTAGACACAAAATTTAAAGTAATGAAAATTCATAGAATAAACATGTAACCTTTGAAAAAATCTATATTAATTATGTTATTCCTAAATTTCGTTATTTTTTTTCATTTTAGGTAAAAAATGACATCATTGCAGAAAAAATCATCAAAGAAAGTTGTGAACAGTCGCCAAAGAAGCCCACCGATCAGAGTCAATCAAGGTTCTCATTAACAAAAAAACTCGAGTCATTTCGATCGGTCCGGTTCACTCAACCCGCCTCACCAACGGCGAATAAGAATCTGAGATCCATCAACCTGCAGACACCCGTCATATCACACTCTTTATCTTTCCCTCCACCGAACCCGGCCCGAATAAACCGGGTCCAGGAACCGCCGGGGAGTAATCGAGCCGGGTTAAAGTTGAGGAACGGTGAAACGAGCCAACGGTACCGATCAGCAGCGGCGATGTGGGTTTTGATGATGACGTTGGCGATGATGGTACTGTGGGGAAGAATTTGTGCGATTTTGTGTACAGCAACTTGGATTTTTGTTGTAACGAGTTTAAGGTCAATTGTTGAAGAATATGATACAGTTGATTTTGTTGAATGCGATTCATATTCTGAAGGGTTTAAGAAGAAATTAGTGGTTTTAAAAGGGTTTCTTTGTAGAAATCACACAGAGAATCTGTTGAAGGAATTATAGAAAAATGAACATTATTGAAGGATTTTTATTTTTTTCCTTTTTAATTTATGTTTGAGATTGATTTTTT

mRNA sequence

AGGCACTCTCATGCCAAAATAAACCTTCCCTTCGATTCTCTCGCTTCCATGGCCAAATCCTCAAATTCCAAATCCAAGCCTCACTTTTTCCTTTCCTGCTTTGGATTTTCCGGCAATCTTCGCCGCTTTAAGCCCCTCAAATCCGCCGCCGGTCACCGAAAACGGCCGTTTTCTTGGTTGAGGTTTCACTCAAAGCCGCCTCCGCCGGTTCACTCCTCTTTTCCGGCCCAGACGATCCGGTCCATTCCTGATTCCGACCGGCTCTCCTCGATTTCTATTGCTCCGACCGCCACTTGTGAGTCGTCGAATGAAGATTTCGCCGTCGCGGTGTCGGTGGTGACAAATCGAACCGGCGAGGTTATGATCATCGAGCCACAAGAGGTAAAAAATGACATCATTGCAGAAAAAATCATCAAAGAAAGTTGTGAACAGTCGCCAAAGAAGCCCACCGATCAGAGTCAATCAAGGTTCTCATTAACAAAAAAACTCGAGTCATTTCGATCGGTCCGGTTCACTCAACCCGCCTCACCAACGGCGAATAAGAATCTGAGATCCATCAACCTGCAGACACCCGTCATATCACACTCTTTATCTTTCCCTCCACCGAACCCGGCCCGAATAAACCGGGTCCAGGAACCGCCGGGGAGTAATCGAGCCGGGTTAAAGTTGAGGAACGGTGAAACGAGCCAACGGTACCGATCAGCAGCGGCGATGTGGGTTTTGATGATGACGTTGGCGATGATGGTACTGTGGGGAAGAATTTGTGCGATTTTGTGTACAGCAACTTGGATTTTTGTTGTAACGAGTTTAAGGTCAATTGTTGAAGAATATGATACAGTTGATTTTGTTGAATGCGATTCATATTCTGAAGGGTTTAAGAAGAAATTAGTGGTTTTAAAAGGGTTTCTTTGTAGAAATCACACAGAGAATCTGTTGAAGGAATTATAGAAAAATGAACATTATTGAAGGATTTTTATTTTTTTCCTTTTTAATTTATGTTTGAGATTGATTTTTT

Coding sequence (CDS)

ATGGCCAAATCCTCAAATTCCAAATCCAAGCCTCACTTTTTCCTTTCCTGCTTTGGATTTTCCGGCAATCTTCGCCGCTTTAAGCCCCTCAAATCCGCCGCCGGTCACCGAAAACGGCCGTTTTCTTGGTTGAGGTTTCACTCAAAGCCGCCTCCGCCGGTTCACTCCTCTTTTCCGGCCCAGACGATCCGGTCCATTCCTGATTCCGACCGGCTCTCCTCGATTTCTATTGCTCCGACCGCCACTTGTGAGTCGTCGAATGAAGATTTCGCCGTCGCGGTGTCGGTGGTGACAAATCGAACCGGCGAGGTTATGATCATCGAGCCACAAGAGGTAAAAAATGACATCATTGCAGAAAAAATCATCAAAGAAAGTTGTGAACAGTCGCCAAAGAAGCCCACCGATCAGAGTCAATCAAGGTTCTCATTAACAAAAAAACTCGAGTCATTTCGATCGGTCCGGTTCACTCAACCCGCCTCACCAACGGCGAATAAGAATCTGAGATCCATCAACCTGCAGACACCCGTCATATCACACTCTTTATCTTTCCCTCCACCGAACCCGGCCCGAATAAACCGGGTCCAGGAACCGCCGGGGAGTAATCGAGCCGGGTTAAAGTTGAGGAACGGTGAAACGAGCCAACGGTACCGATCAGCAGCGGCGATGTGGGTTTTGATGATGACGTTGGCGATGATGGTACTGTGGGGAAGAATTTGTGCGATTTTGTGTACAGCAACTTGGATTTTTGTTGTAACGAGTTTAAGGTCAATTGTTGAAGAATATGATACAGTTGATTTTGTTGAATGCGATTCATATTCTGAAGGGTTTAAGAAGAAATTAGTGGTTTTAAAAGGGTTTCTTTGTAGAAATCACACAGAGAATCTGTTGAAGGAATTATAG

Protein sequence

MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVHSSFPAQTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEKIIKESCEQSPKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVISHSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRICAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNHTENLLKEL
Homology
BLAST of Lsi02G025330 vs. ExPASy Swiss-Prot
Match: Q9FMY4 (Uncharacterized protein At5g23160 OS=Arabidopsis thaliana OX=3702 GN=At5g23160 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.8e-05
Identity = 30/82 (36.59%), Postives = 44/82 (53.66%), Query Frame = 0

Query: 224 VLMMTLAMMVLWGRICAILCTATWIFVVTSLRSIVEEYDTVDFV--------------EC 283
           ++M+TL +M+ WGR+CAILCT+TW ++   L+        V+                + 
Sbjct: 187 IIMLTLMIMLTWGRLCAILCTSTWCYIFPRLKEAATAVAVVNRKRSGSGKGEEGSFQGDL 246

Query: 284 DSYSEGFKKKLVVLKGFLCRNH 292
           D  S  +KKK VVL+GFL R H
Sbjct: 247 DLNSVAYKKK-VVLEGFLVRQH 267

BLAST of Lsi02G025330 vs. ExPASy TrEMBL
Match: A0A1S3CFR9 (uncharacterized protein At5g23160 OS=Cucumis melo OX=3656 GN=LOC103499966 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.7e-110
Identity = 224/293 (76.45%), Postives = 241/293 (82.25%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVHSSFPA 60
           MAKSSNSKSKPHFFLSCFGFS  LRRFKP KS AGHRKRPFSW R +SKPP PVHSSFP+
Sbjct: 1   MAKSSNSKSKPHFFLSCFGFSDKLRRFKPPKSPAGHRKRPFSWFR-NSKPPTPVHSSFPS 60

Query: 61  QTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEK 120
            T  S+ +SDRLSS+SIAPTAT +SSNED AVAV V T RTG+ +II P EVKNDI+AEK
Sbjct: 61  HTNPSVTNSDRLSSVSIAPTATSKSSNEDLAVAVPVATKRTGQEVIIGPHEVKNDIVAEK 120

Query: 121 IIKESCEQS--PKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVIS 180
            I ESCE S  P K  DQSQSRFSLTKKLESFR VRFTQ ASP   KN +S NLQ P IS
Sbjct: 121 TIHESCEHSNLPNKFIDQSQSRFSLTKKLESFRLVRFTQTASP--KKNPKSTNLQRPTIS 180

Query: 181 HSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRI 240
           HSLSFPPP PA +N+V EP  S + G    N ++SQRYRSA AM VLMMTLAMMVLWGRI
Sbjct: 181 HSLSFPPPKPAPLNKVSEPSRSKQFGSMSANRKSSQRYRSAVAMSVLMMTLAMMVLWGRI 240

Query: 241 CAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNH 292
           CAILCTATWIFVVTSLRSIVEEYD +DFVE DSYSEGFKKKLVVLKGF+CRNH
Sbjct: 241 CAILCTATWIFVVTSLRSIVEEYDRIDFVESDSYSEGFKKKLVVLKGFMCRNH 290

BLAST of Lsi02G025330 vs. ExPASy TrEMBL
Match: A0A0A0K6H3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420760 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.8e-101
Identity = 212/294 (72.11%), Postives = 235/294 (79.93%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVH-SSFP 60
           MAKSSNSKSKPHFFL CFG+S  L RFKPLKS AGHRKR FSW R +SKPP P+H SSFP
Sbjct: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFR-NSKPPTPLHSSSFP 60

Query: 61  AQTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAE 120
           + T RS+ +SDRLSS+SIAPTAT  SSNED  +AV V TNRTGE +II P EVKND +A 
Sbjct: 61  SHTNRSVTNSDRLSSVSIAPTATTNSSNED--LAVPVATNRTGEEVIISPHEVKNDTVAG 120

Query: 121 KIIKESCE--QSPKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVI 180
           K I  S E   SP KP DQSQSRFSLTK+LESFRS+RF Q A P   KN +SIN+QTP I
Sbjct: 121 KTIHGSSEHSNSPNKPIDQSQSRFSLTKRLESFRSIRFNQTAPP--KKNTKSINVQTPTI 180

Query: 181 SHSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGR 240
           SHSLSFPPP P   NRV E   S R   K +N ++SQ+YRS AAM VLMMTLAMMV+WGR
Sbjct: 181 SHSLSFPPPKPTPSNRVSELRESKRVCSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGR 240

Query: 241 ICAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNH 292
           ICAILCTATWIF+VTSLRSIVEEY+ +DFVE DSYSEGFKKKLVVLKGF+CRNH
Sbjct: 241 ICAILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNH 289

BLAST of Lsi02G025330 vs. ExPASy TrEMBL
Match: A0A6J1GRB9 (uncharacterized protein LOC111456417 OS=Cucurbita moschata OX=3662 GN=LOC111456417 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 5.8e-92
Identity = 196/300 (65.33%), Postives = 225/300 (75.00%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVHSSFPA 60
           MAKS NSKS PH FL CFGFSG  RRFKPLK AA HRK P SW+RFHSK PPP  S    
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPSP-SV 60

Query: 61  QTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEK 120
           Q   S  DSDRLSS SI+PTA   +SNEDF VAV V TNR G  ++  P+ VKNDI+ EK
Sbjct: 61  QFNLSNTDSDRLSSKSISPTAAF-NSNEDFTVAVPVATNRAGGEIVTRPENVKNDILPEK 120

Query: 121 IIKESCEQ--SPKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVIS 180
           II+ESCEQ  SPKKP+ +S+SRFSLT+KLESFRS RF QPASPT  KNL+S +L +P IS
Sbjct: 121 IIRESCEQWNSPKKPSARSESRFSLTRKLESFRSGRFAQPASPTTKKNLKSTSLHSPTIS 180

Query: 181 HSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRI 240
                   +P RIN+V+EP  S R GLK  NGET QRY+S A M +LM+TL +MV WGR+
Sbjct: 181 -------LHPPRINQVKEPLASMRVGLKPNNGETRQRYQSMAGMSILMITLVIMVAWGRL 240

Query: 241 CAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNHTENLLKE 299
           CAILCTA WI +VTSLRSI+E+YDTV F E DSYSEGFKKKLVVLKGF+CRN T+N  K+
Sbjct: 241 CAILCTAAWIVMVTSLRSIIEDYDTVQFFESDSYSEGFKKKLVVLKGFVCRNQTQNQSKK 291

BLAST of Lsi02G025330 vs. ExPASy TrEMBL
Match: A0A6J1JV00 (uncharacterized protein LOC111488090 OS=Cucurbita maxima OX=3661 GN=LOC111488090 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.9e-87
Identity = 189/300 (63.00%), Postives = 220/300 (73.33%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVHSSFPA 60
           MAKS NSKS PH FL CFGFSG  RRFKPLK AA HRK P SW+RFHSK PPP  S    
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPS---V 60

Query: 61  QTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEK 120
           Q   S  DSDRLSS SI+PTA   +SNEDF VAV V TNR G  ++  P+ VKNDI+ EK
Sbjct: 61  QFNLSNTDSDRLSSKSISPTAAF-NSNEDFTVAVPVATNRAGGEIVTRPENVKNDILPEK 120

Query: 121 IIKESCEQ--SPKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVIS 180
           II+E+CEQ  SPKK + +S+SRFS T+KLESFRS RF QP SPT  KNL+S NLQ+P IS
Sbjct: 121 IIRENCEQLNSPKKLSARSESRFSFTRKLESFRSGRFAQPVSPTTKKNLKSTNLQSPTIS 180

Query: 181 HSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRI 240
            +L        RIN+V+E   S +  LK  N E  QRYRS A M +LM+TL +M++WGR+
Sbjct: 181 LNL-------PRINQVKESMASMQVRLKPNNSEMKQRYRSMAGMSILMITLVIMIVWGRL 240

Query: 241 CAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNHTENLLKE 299
           CAILCTA WI +VTSLRSIVE+YDT+ F + DSYSEGFKKKLVVLKGFLCRN T+N  K+
Sbjct: 241 CAILCTAAWIVMVTSLRSIVEDYDTLQFFKSDSYSEGFKKKLVVLKGFLCRNQTQNRSKK 289

BLAST of Lsi02G025330 vs. ExPASy TrEMBL
Match: A0A6J1DHG8 (uncharacterized protein LOC111020508 OS=Momordica charantia OX=3673 GN=LOC111020508 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 161/294 (54.76%), Postives = 201/294 (68.37%), Query Frame = 0

Query: 7   SKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVHSSFPAQTIRSI 66
           +KSKP   L CFGFSG LRR KPLK AA H KRPFSW+RFH+K  PPV S+  A   RS 
Sbjct: 2   AKSKPQ-LLCCFGFSGKLRRSKPLKPAAAHTKRPFSWMRFHAK--PPVRSALLAD--RSN 61

Query: 67  PDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEKIIKESC 126
           PDSDRL+  S+A T   +  +ED A       N+ GE     P++V N+ + E+II E+ 
Sbjct: 62  PDSDRLAPGSLASTTVYKPPSEDLAAVEPPAMNQAGEG---RPEKVGNEDVVEEIILETR 121

Query: 127 EQS--PKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVISHSLSFP 186
             S  PKKP  +SQ+RFSLT++LESFRS RFT+P SPTA K+  + N   P IS SLSFP
Sbjct: 122 GHSDTPKKPVGESQTRFSLTRRLESFRSGRFTKPVSPTARKDPITTN-PVPAISKSLSFP 181

Query: 187 PPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRICAILCT 246
             NP R  +V+ PP S R GL     E S++YRSAAA+ + ++TL++M+LWGR+CAIL T
Sbjct: 182 ALNPTRRVQVESPPTSMRVGLD--GDEMSKKYRSAAAISIFIVTLSIMILWGRMCAILST 241

Query: 247 ATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNHTENLLKE 299
           A WI +V SL SIVEE D  DF+  DSYSEG KKKLV+LKGFL R+  EN+LK+
Sbjct: 242 AAWILIVASLESIVEEDDENDFIGSDSYSEGLKKKLVILKGFLYRSQRENMLKK 284

BLAST of Lsi02G025330 vs. NCBI nr
Match: XP_038897219.1 (uncharacterized protein LOC120085350 isoform X1 [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.5e-131
Identity = 258/301 (85.71%), Postives = 270/301 (89.70%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVHSSFPA 60
           MAKSSNSKSKPHFFLSCFGFSG LRRFKPLKS+AG RKRPFSW+ FHSKPPPPVHSS P 
Sbjct: 1   MAKSSNSKSKPHFFLSCFGFSGKLRRFKPLKSSAGQRKRPFSWMSFHSKPPPPVHSSLPV 60

Query: 61  QTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEK 120
           Q  RSIPDSDRLSSISIAPTAT +SSNEDFAVAVSVVTNRTG+ +II  QEVKNDIIAEK
Sbjct: 61  QINRSIPDSDRLSSISIAPTATSKSSNEDFAVAVSVVTNRTGDELIIGQQEVKNDIIAEK 120

Query: 121 IIKESCEQ--SPKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVIS 180
           IIKESCEQ  S KKP DQSQSRFSLTKKLESFRSVRFTQPASP   KNL+S NL+TP IS
Sbjct: 121 IIKESCEQSNSRKKPADQSQSRFSLTKKLESFRSVRFTQPASP--KKNLKSTNLKTPTIS 180

Query: 181 HSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRI 240
           HSLSFPPPNPAR NR  E PGS R GLK +NGETSQRYRSAAA+ VLMMTLAMMVLWGRI
Sbjct: 181 HSLSFPPPNPARRNRNNEWPGSKRDGLKSKNGETSQRYRSAAAVSVLMMTLAMMVLWGRI 240

Query: 241 CAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNHTENLLKE 300
           CAILCTATWIF+VTSLR+IVEE DT+DFVE DSYSEGFKKKLVVLKGFLCRNH ENLLKE
Sbjct: 241 CAILCTATWIFIVTSLRTIVEECDTIDFVESDSYSEGFKKKLVVLKGFLCRNHRENLLKE 299

BLAST of Lsi02G025330 vs. NCBI nr
Match: XP_008461362.1 (PREDICTED: uncharacterized protein At5g23160 [Cucumis melo])

HSP 1 Score: 407.5 bits (1046), Expect = 9.8e-110
Identity = 224/293 (76.45%), Postives = 241/293 (82.25%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVHSSFPA 60
           MAKSSNSKSKPHFFLSCFGFS  LRRFKP KS AGHRKRPFSW R +SKPP PVHSSFP+
Sbjct: 1   MAKSSNSKSKPHFFLSCFGFSDKLRRFKPPKSPAGHRKRPFSWFR-NSKPPTPVHSSFPS 60

Query: 61  QTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEK 120
            T  S+ +SDRLSS+SIAPTAT +SSNED AVAV V T RTG+ +II P EVKNDI+AEK
Sbjct: 61  HTNPSVTNSDRLSSVSIAPTATSKSSNEDLAVAVPVATKRTGQEVIIGPHEVKNDIVAEK 120

Query: 121 IIKESCEQS--PKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVIS 180
            I ESCE S  P K  DQSQSRFSLTKKLESFR VRFTQ ASP   KN +S NLQ P IS
Sbjct: 121 TIHESCEHSNLPNKFIDQSQSRFSLTKKLESFRLVRFTQTASP--KKNPKSTNLQRPTIS 180

Query: 181 HSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRI 240
           HSLSFPPP PA +N+V EP  S + G    N ++SQRYRSA AM VLMMTLAMMVLWGRI
Sbjct: 181 HSLSFPPPKPAPLNKVSEPSRSKQFGSMSANRKSSQRYRSAVAMSVLMMTLAMMVLWGRI 240

Query: 241 CAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNH 292
           CAILCTATWIFVVTSLRSIVEEYD +DFVE DSYSEGFKKKLVVLKGF+CRNH
Sbjct: 241 CAILCTATWIFVVTSLRSIVEEYDRIDFVESDSYSEGFKKKLVVLKGFMCRNH 290

BLAST of Lsi02G025330 vs. NCBI nr
Match: XP_011659425.1 (uncharacterized protein LOC105436182 isoform X1 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 3.7e-101
Identity = 212/294 (72.11%), Postives = 235/294 (79.93%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVH-SSFP 60
           MAKSSNSKSKPHFFL CFG+S  L RFKPLKS AGHRKR FSW R +SKPP P+H SSFP
Sbjct: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFR-NSKPPTPLHSSSFP 60

Query: 61  AQTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAE 120
           + T RS+ +SDRLSS+SIAPTAT  SSNED  +AV V TNRTGE +II P EVKND +A 
Sbjct: 61  SHTNRSVTNSDRLSSVSIAPTATTNSSNED--LAVPVATNRTGEEVIISPHEVKNDTVAG 120

Query: 121 KIIKESCE--QSPKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVI 180
           K I  S E   SP KP DQSQSRFSLTK+LESFRS+RF Q A P   KN +SIN+QTP I
Sbjct: 121 KTIHGSSEHSNSPNKPIDQSQSRFSLTKRLESFRSIRFNQTAPP--KKNTKSINVQTPTI 180

Query: 181 SHSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGR 240
           SHSLSFPPP P   NRV E   S R   K +N ++SQ+YRS AAM VLMMTLAMMV+WGR
Sbjct: 181 SHSLSFPPPKPTPSNRVSELRESKRVCSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGR 240

Query: 241 ICAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNH 292
           ICAILCTATWIF+VTSLRSIVEEY+ +DFVE DSYSEGFKKKLVVLKGF+CRNH
Sbjct: 241 ICAILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNH 289

BLAST of Lsi02G025330 vs. NCBI nr
Match: XP_023549176.1 (uncharacterized protein LOC111807611 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.3 bits (913), Expect = 2.6e-94
Identity = 202/303 (66.67%), Postives = 230/303 (75.91%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPP---VHSS 60
           MAKS NSKS PH FL CFGFSG  RRFKPLK AA HRK P SW+RFHSK PPP   VH +
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPSVHFN 60

Query: 61  FPAQTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDII 120
                  S  DSDRLSS SIAP A   +SNEDF VAV V TNR+GE ++  P+ VKNDI+
Sbjct: 61  L------SNTDSDRLSSKSIAPAAAF-NSNEDFTVAVPVATNRSGEEIVTRPENVKNDIL 120

Query: 121 AEKIIKESCEQ--SPKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTP 180
            EKII+ESCEQ  SPKKP+ +S+SRFSLT+KLESFRS RF QPASPTA KNL+S NLQ+P
Sbjct: 121 PEKIIRESCEQWNSPKKPSARSESRFSLTRKLESFRSGRFAQPASPTAKKNLKSTNLQSP 180

Query: 181 VISHSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLW 240
            IS        NP RIN+V+EP  S R GLK  NGET QRY+S A M +LM+TL +MV+W
Sbjct: 181 TIS-------LNPPRINQVKEPLASMRIGLKPNNGETRQRYQSMAGMSILMITLVIMVVW 240

Query: 241 GRICAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNHTENL 299
           GR+CAILCTA WI +VTSLRSIVE+YDT+ F E DSYSEGFKKKLVVLKGFLCRN T+N 
Sbjct: 241 GRLCAILCTAAWIVMVTSLRSIVEDYDTLQFFESDSYSEGFKKKLVVLKGFLCRNQTQNR 289

BLAST of Lsi02G025330 vs. NCBI nr
Match: XP_022954035.1 (uncharacterized protein LOC111456417 [Cucurbita moschata])

HSP 1 Score: 347.4 bits (890), Expect = 1.2e-91
Identity = 196/300 (65.33%), Postives = 225/300 (75.00%), Query Frame = 0

Query: 1   MAKSSNSKSKPHFFLSCFGFSGNLRRFKPLKSAAGHRKRPFSWLRFHSKPPPPVHSSFPA 60
           MAKS NSKS PH FL CFGFSG  RRFKPLK AA HRK P SW+RFHSK PPP  S    
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPSP-SV 60

Query: 61  QTIRSIPDSDRLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEK 120
           Q   S  DSDRLSS SI+PTA   +SNEDF VAV V TNR G  ++  P+ VKNDI+ EK
Sbjct: 61  QFNLSNTDSDRLSSKSISPTAAF-NSNEDFTVAVPVATNRAGGEIVTRPENVKNDILPEK 120

Query: 121 IIKESCEQ--SPKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVIS 180
           II+ESCEQ  SPKKP+ +S+SRFSLT+KLESFRS RF QPASPT  KNL+S +L +P IS
Sbjct: 121 IIRESCEQWNSPKKPSARSESRFSLTRKLESFRSGRFAQPASPTTKKNLKSTSLHSPTIS 180

Query: 181 HSLSFPPPNPARINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRI 240
                   +P RIN+V+EP  S R GLK  NGET QRY+S A M +LM+TL +MV WGR+
Sbjct: 181 -------LHPPRINQVKEPLASMRVGLKPNNGETRQRYQSMAGMSILMITLVIMVAWGRL 240

Query: 241 CAILCTATWIFVVTSLRSIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNHTENLLKE 299
           CAILCTA WI +VTSLRSI+E+YDTV F E DSYSEGFKKKLVVLKGF+CRN T+N  K+
Sbjct: 241 CAILCTAAWIVMVTSLRSIIEDYDTVQFFESDSYSEGFKKKLVVLKGFVCRNQTQNQSKK 291

BLAST of Lsi02G025330 vs. TAIR 10
Match: AT5G23160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 6.3e-06
Identity = 30/82 (36.59%), Postives = 44/82 (53.66%), Query Frame = 0

Query: 224 VLMMTLAMMVLWGRICAILCTATWIFVVTSLRSIVEEYDTVDFV--------------EC 283
           ++M+TL +M+ WGR+CAILCT+TW ++   L+        V+                + 
Sbjct: 187 IIMLTLMIMLTWGRLCAILCTSTWCYIFPRLKEAATAVAVVNRKRSGSGKGEEGSFQGDL 246

Query: 284 DSYSEGFKKKLVVLKGFLCRNH 292
           D  S  +KKK VVL+GFL R H
Sbjct: 247 DLNSVAYKKK-VVLEGFLVRQH 267

BLAST of Lsi02G025330 vs. TAIR 10
Match: AT5G08240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits to 69 proteins in 10 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 73/289 (25.26%), Postives = 119/289 (41.18%), Query Frame = 0

Query: 13  FFLSCFGFSGNLRRFKPL--KSAAGHRKRPFSWLRFHSKPPPPVHSSFPAQTIRSIPDSD 72
           +FL CFGFS  +   KP+  K   G +K+    ++    P   + S F  +     P   
Sbjct: 17  YFLGCFGFSRKIYSDKPMVTKGDGGEKKK----MKKKRIPRWFLCSKFRLKNSEIKPSPI 76

Query: 73  RLSSISIAPTATCESSNEDFAVAVSVVTNRTGEVMIIEPQEVKNDIIAEKII-KESCEQS 132
             +     PT+  E   +D    +SV+   T         + KN  + +K + +E+ E  
Sbjct: 77  EETE---KPTSRVEDETDDKQKPLSVIRRIT---------DRKNIPVDDKAMNQETKETK 136

Query: 133 PKKPTDQSQSRFSLTKKLESFRSVRFTQPASPTANKNLRSINLQTPVISHSLSFPPPNPA 192
           PK   D +  R    + L SF+    T+  S                IS     P   P 
Sbjct: 137 PKDLRDITPDRSKPIEPLGSFKEDTCTERISS---------------ISSRYGKPDLKPT 196

Query: 193 RINRVQEPPGSNRAGLKLRNGETSQRYRSAAAMWVLMMTLAMMVLWGRICAILCTATWIF 252
           R                 RNG   + +     + ++++TL +M++WGR+CAILCT+ W +
Sbjct: 197 R----------------SRNGSRVKPFDPVIGISIIILTLMIMLVWGRLCAILCTSAWCY 256

Query: 253 VVTSLR---SIVEEYDTVDFVECDSYSEGFKKKLVVLKGFLCRNHTENL 296
           V+  +R   ++ +          D  SE +K+K VVL GFL R +  +L
Sbjct: 257 VLPRVRDAAALAKRKRNGSASVPDLNSESYKRK-VVLDGFLGRQNRVSL 257

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FMY48.8e-0536.59Uncharacterized protein At5g23160 OS=Arabidopsis thaliana OX=3702 GN=At5g23160 P... [more]
Match NameE-valueIdentityDescription
A0A1S3CFR94.7e-11076.45uncharacterized protein At5g23160 OS=Cucumis melo OX=3656 GN=LOC103499966 PE=4 S... [more]
A0A0A0K6H31.8e-10172.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420760 PE=4 SV=1[more]
A0A6J1GRB95.8e-9265.33uncharacterized protein LOC111456417 OS=Cucurbita moschata OX=3662 GN=LOC1114564... [more]
A0A6J1JV001.9e-8763.00uncharacterized protein LOC111488090 OS=Cucurbita maxima OX=3661 GN=LOC111488090... [more]
A0A6J1DHG81.4e-6654.76uncharacterized protein LOC111020508 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
Match NameE-valueIdentityDescription
XP_038897219.11.5e-13185.71uncharacterized protein LOC120085350 isoform X1 [Benincasa hispida][more]
XP_008461362.19.8e-11076.45PREDICTED: uncharacterized protein At5g23160 [Cucumis melo][more]
XP_011659425.13.7e-10172.11uncharacterized protein LOC105436182 isoform X1 [Cucumis sativus][more]
XP_023549176.12.6e-9466.67uncharacterized protein LOC111807611 [Cucurbita pepo subsp. pepo][more]
XP_022954035.11.2e-9165.33uncharacterized protein LOC111456417 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G23160.16.3e-0636.59unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G08240.11.1e-0525.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34379:SF3PROTEIN, PUTATIVE-RELATEDcoord: 3..292
IPR040411Uncharacterized protein At5g23160-likePANTHERPTHR34379OS07G0553800 PROTEINcoord: 3..292

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G025330.1Lsi02G025330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane