Lsi02G025080 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G025080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Short-chain dehydrogenase reductase 3b-like
Location	chr02: 31537849 .. 31545082 (+)
RNA-Seq Expression	Lsi02G025080
Synteny	Lsi02G025080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTAAATATATATGTCATTGGCATTGAATATATAGATCATTAAATACCGTTATGTCATATTGCGAAACATTTACATTATTGGTGATCAAGGCCAATTAATTTTTTTATTTGTCAAGCTGACCCTAATTTAATTTTCTTTAGTACAAAAGAAAAAAAAAAAAAAAAAATCAATAGAGTCTTCTCTATTGGGAACTCATGAACTCATGGCGGGTGGTTTTCTAGCCAAATTTTATTTTCCAAAGCATTGGCTTACATGTTGGACGCGGTTATTTACAGCCTTGGTAGCAAATCTTGAAATACGAAAAAAAAAATTATAAACAAAATTTAACTAGAAAAATTTTAAAAATAGAAAAATAAATAAAACTATTTACACAAAATAACAAAATTTTTAAATAACAAATATAAGGGAGATTTTGGCATATATATTTACGTCATATTAAATTCTAGAAAAATTTTCACATATAGAAAAAATGTCAAACTATTTATAGAAAATAGTAAAAAAAAAAAATATTGATAGACTTCTATTAACATCTATAAGTGATAGACTTCTATCAGCGTCTATCACAACTATCTAAAAATTTTACTATTTTGTATAAATAGTTTCCTTTATTTTTCTATTCTTAAAAAATCACTATTTTTTGTTTTAAATTTCAATATTCATCAAAATAACTCTTAAATCACAAATTGACCAAAAAGCTTAAGTTGATCTTCAGTTGCAGGCTTGAAATATGAATAAGAGCCAAGTAAGTGGAAATAGATATTAATTGGGGAGGAAACGACAACGCAACACAAGGACATCCTGGACCACACGCTCTGATACCATCTTAAATCGCCAATTGACCCAAAAGGTTAAGTTGATGGGTGAAGGACAAATTTAATATCATATCATATTTTAATTACATTGATGACTTAAAGACATTGATATATCTTTGAAATTTATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACGCTTATATAAAACGATTTGAGTACAAATTTGAACATAGCCAAAAGCTTGAAGACGAGATCTTAAGAATGTCTGAACCAAGGTAAAAATATCTTCTCTTAATATTTAATTCTATTAGGAAAATTTGGATTTAACACAATCTTCTCAAGCTCTTGGCTATCTCTATGTACAAAATTTCTCACAGGCGGCTGCATGGGAAGGTGGCTCTCATAACAGGAGCTGCCAGCGGGATCGGCGAGGAGACGGCAAGGCTTTTTGCAGCCAATGGTGCTTTCGTTGTCGTAGCGGATATCGACTACAAACTGGGCCAGAAGGTGGCAGCCTCCATCGGCATCGACCAAGCCAGCTTTCACCATTGTGATGTGAGAGACGAGAAGCAAGTCGAAAAAACAGTGAGCTACATCGTCGAAAAACACGGCCGCCTTGACATTCTCTTTAGCAACGCCGGCATCGTTGGCTCTCTCACTTCAATTATAGAGCTTGACATGTCCAACTTCGACAATGTAATGGCAACCAATGTTCGTGGGGTATGTCATATTTTCGTATGAGTTTAATATAATTAGTTTTCTACAGTTAGAAAATGTCTAATATGAACTTTCAATTTAAGTCCTTTAATTTTTAATTTTATGTGTGTAATACTGTCCTCGACATACTAAAAAAAAAAAATTAATGAATTTATTGAGCATATTTTTAATCTTCAAGTTATTAAACTTATAATTTAACTTTTAATAGCCTTTTCTTTATTCATATTCATAAAAGGTGGTTGCAACGATCAAGCACGGAGGACAAGCAATGGTGGAGCGAAACATACGTGGGTCGATAATTTGCACGACAAGCGTGTCGGCGATGATCGGTGGGGTGATGTCAATGGCGTACACAAGCTCAAAGCATGCTGTGTTGGGGGTGGTGAGGTCAAGCTGCAAGGAGCTCGGGGCATATGGAATTAGGGTGAACTGCGTGTCGCCATATGGATTAGTGACGCCGCTGGCTTGCCAAAGTTTGAATTTGGATGATAATAAGCTTGAAGAGGTTCTTAGTTCAAAGGCAAGCTTGAAGGGTGTGGTGTTGAAGGCTAGTCACATAGCTGAGGCTGCTTTGTTTCTTGCATCTGATGAATCAACTTATATAACTGAACAAAACTTAGTCGTTGATGGAGGTTTCACGGCCGTTAGATCAATCATATAGTTAGGGGCCGTTTGTTTCGCAGACATCTTAGATTCTCACAGAGTGAACATTTGGATTACCATATTTGTTTCATGATATTGTAAGATGCCCTGGCATTTAGAGATTCTCGGACATCTCAAGAGTTTTAGATGCCTTCCTGAAACATGAAGAGAATCAAACAAGTACTAAATACTACAATATTTTCCAATAAATGAAAAATGCTCAACTCCAAAATCGAAATGTTGGTGGTAAACTAACATGGTATCGTGACTTGAGATAAGCATCTAGAATTTGCGCATCATAATTATGCTACTATATAAAGTTAATAGCCTACGTCTAAGCAACACAAATACTTTAGTTTGTATAATATGTCTATATTAGAAACTAGTTGGACATTCTGACATTTGTAGGACACATGTTATATCTACTTAGCACGATGTACAAAGTGAATATGAGTACAACATTTGTTAGTCACTTATCAAACACTTGTTAAACATTGTAAATAGAGATAAATAGTAATATGAGCCAAAACCAAAAGTAACAAAGTTTGGGAGTAAAATACATCACTCGTTTAAGCATATAAATGCATAGAAAGATATATGTTAAAATCTTTGTATATTTTTAAAAACTTGTCTTTACCATGTATGTGTCTGAAAACTTTTAAAAAAATGACATATCACCACGTCGATGTCATATGATACCCATTTCACGTATTTGAATTTGTGCTTCTTAGGCCTACATAATGAGTTTGCATAGGATACAAGAGCTGGCATGGGAGGATTACAAATTATTAACTTTAACCAAGAACGAGCATCCACCAAAGTGACTTTCATCTGTCATCGCTTCCATTTCACAGTATGCTTTCATTCAAACATTATCTTGCATACTCATTATAGAACCTATACTAAAAGTAACAATTACAATTGATTGAGAAAGAAAATTGTAAGTTACTAGACTTTTCAGAGGACTGATTCTCTCCCAAAATATCAGTTATTTCCATCCATTGTCCTCACCTTTCCTTCTTCCATCACTTCTCTTATAAACATAGACCTACCCCTCACTATCATCCACTCAGAAAAGAGACTAGCATAACAAAGCTACCCCCTAGGCTCACAAACATTTCTCCTAATATAAGGGAGCAAAAAAAATTTGGAGGTTTCCCCCTTTACCATATTGCTAGAATGCATCTTGAACTAAGCATGGAAAATGTTTTCAAGTCGAGCAGTAATAAAGGGTATCAGCTAGCAACCTACTTGAGAGTGAATGATATATATAACTCACCTTCACAGATGAAATGAATGGCATCCATTTGGGAATGGCTTCACGATCTGAGTAGCATTTATAGGCAACCGAAGCAGGTATGTCAACTTCCATCTTAGCCCTGCATTCATCACATTTCCTAATTATAGCAACAAACCTATAACATTCTAAGAAACTCAGAATCCATCCTCCTGGAAGAACTGCCCAACCACCAAACCAATTCAGAGAAGAATTGGGAACTTTTAGAAGGAACAACGAAATTGATATCCAAACAACCCATAGCAAATAGAGAATCAATAAATGAGAATGAAACTGAGAATCGAGAAAGACATGGTGTATTTACTTGCAATTCTGCCATTCCATCACAGGGGAGACGGATTTGAGTCGAGGGCAAATGGGGTTTCTGCTGCGCTTCGAAGAACCGCGTGGGATCTTGAAGACGAGCTCGGGTAGAGACAGTGACCTGGAATTGATGCTTCTGCAAGTGGGAATCGCCATGAATAAGATGCTATTTCTCCTTCTGATCGATCGATGACTGGGATTCAGAGGGTTTGGAGTTGAATTGCAGGTGAGTGCTGCAATTGACATAGTGGGTTTTGGGATTAGTGAAGAAGAAAACGGCAAAGGGACATTAAAGGGAGTTGGGAGCAGAGATTTGACTTGCAGTCTTGCACCAAACTGCAACAACAGCCCTTTGATATTATTGTGGCTCTGGAAAAAGAAATTTTCGGAGGCTGTTCTTCTTGC

mRNA sequence

ATGACGCGGCTGCATGGGAAGGTGGCTCTCATAACAGGAGCTGCCAGCGGGATCGGCGAGGAGACGGCAAGGCTTTTTGCAGCCAATGGTGCTTTCGTTGTCGTAGCGGATATCGACTACAAACTGGGCCAGAAGGTGGCAGCCTCCATCGGCATCGACCAAGCCAGCTTTCACCATTGTGATGTGAGAGACGAGAAGCAAGTCGAAAAAACAGTGAGCTACATCGTCGAAAAACACGGCCGCCTTGACATTCTCTTTAGCAACGCCGGCATCGTTGGCTCTCTCACTTCAATTATAGAGCTTGACATGTCCAACTTCGACAATGTGGTTGCAACGATCAAGCACGGAGGACAAGCAATGGTGGAGCGAAACATACGTGGGTCGATAATTTGCACGACAAGCGTGTCGGCGATGATCGGTGGGGTGATGTCAATGGCGTACACAAGCTCAAAGCATGCTGTGTTGGGGGTGGTGAGGTCAAGCTGCAAGGAGCTCGGGGCATATGGAATTAGGGTGAACTGCGTGTCGCCATATGGATTAGTGACGCCGCTGGCTTGCCAAAGTTTGAATTTGGATGATAATAAGCTTGAAGAGGTTCTTAGTTCAAAGGCAAGCTTGAAGGGTGTGGTGTTGAAGGCTAGTCACATAGCTGAGGCTGCTTTGGGAGACGGATTTGAGTCGAGGGCAAATGGGGTTTCTGCTGCGCTTCGAAGAACCGCGTGGGATCTTGAAGACGAGCTCGGGTAGAGACAGTGACCTGGAATTGATGCTTCTGCAAGTGGGAATCGCCATGAATAAGATGCTATTTCTCCTTCTGATCGATCGATGACTGGGATTCAGAGGGTTTGGAGTTGAATTGCAGGTGAGTGCTGCAATTGACATAGTGGGTTTTGGGATTAGTGAAGAAGAAAACGGCAAAGGGACATTAAAGGGAGTTGGGAGCAGAGATTTGACTTGCAGTCTTGCACCAAACTGCAACAACAGCCCTTTGATATTATTGTGGCTCTGGAAAAAGAAATTTTCGGAGGCTGTTCTTCTTGC

Coding sequence (CDS)

ATGACGCGGCTGCATGGGAAGGTGGCTCTCATAACAGGAGCTGCCAGCGGGATCGGCGAGGAGACGGCAAGGCTTTTTGCAGCCAATGGTGCTTTCGTTGTCGTAGCGGATATCGACTACAAACTGGGCCAGAAGGTGGCAGCCTCCATCGGCATCGACCAAGCCAGCTTTCACCATTGTGATGTGAGAGACGAGAAGCAAGTCGAAAAAACAGTGAGCTACATCGTCGAAAAACACGGCCGCCTTGACATTCTCTTTAGCAACGCCGGCATCGTTGGCTCTCTCACTTCAATTATAGAGCTTGACATGTCCAACTTCGACAATGTGGTTGCAACGATCAAGCACGGAGGACAAGCAATGGTGGAGCGAAACATACGTGGGTCGATAATTTGCACGACAAGCGTGTCGGCGATGATCGGTGGGGTGATGTCAATGGCGTACACAAGCTCAAAGCATGCTGTGTTGGGGGTGGTGAGGTCAAGCTGCAAGGAGCTCGGGGCATATGGAATTAGGGTGAACTGCGTGTCGCCATATGGATTAGTGACGCCGCTGGCTTGCCAAAGTTTGAATTTGGATGATAATAAGCTTGAAGAGGTTCTTAGTTCAAAGGCAAGCTTGAAGGGTGTGGTGTTGAAGGCTAGTCACATAGCTGAGGCTGCTTTGGGAGACGGATTTGAGTCGAGGGCAAATGGGGTTTCTGCTGCGCTTCGAAGAACCGCGTGGGATCTTGAAGACGAGCTCGGGTAG

Protein sequence

MTRLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDVRDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVATIKHGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNCVSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAALGDGFESRANGVSAALRRTAWDLEDELG

Homology

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BLAST of Lsi02G025080 vs. ExPASy Swiss-Prot
Match: Q94K41 (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.2e-61
Identity = 117/227 (51.54%), Postives = 162/227 (71.37%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GK+ +ITG ASGIG E+ RLF  +GA VV+ D+  +LGQ VA SIG D+AS++HCDV
Sbjct: 5   RLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDV 64

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IK 122
            +E +VE  V + VEK+G+LD+LFSNAG++    SI++L+++  D  +A         IK
Sbjct: 65  TNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTAAFIK 124

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           H  +AMVE+ IRGSI+CTTSV+A I G     YT+SKH +LG+++S+   LG YGIRVN 
Sbjct: 125 HAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRVNG 184

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           V+P+G+ TPL C    ++ N +E+  S+ A+LKG+VLKA H+AEAAL
Sbjct: 185 VAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAAL 231

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BLAST of Lsi02G025080 vs. ExPASy Swiss-Prot
Match: F4J300 (Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.6e-58
Identity = 124/228 (54.39%), Postives = 161/228 (70.61%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GK+ +ITG ASGIG E ARLF  +GA VV+ D+  +LGQ VA SIG+D+ASF+ CD+
Sbjct: 5   RLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDI 64

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IK 122
            DE +VE  V + VEKHG+LD+LFSNAG++    SI++LD+  FD  +A         IK
Sbjct: 65  TDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAAAFIK 124

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           H  ++MV    RGSI+CTTSV+A IGG    +YT+SKHA+LG+VRS+C  LG YGIRVN 
Sbjct: 125 HAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRVNG 184

Query: 183 VSPYGLVTPLACQSLNLDDNKL-EEVLSSKASLKGVVLKASHIAEAAL 222
           V+PYG+ T L   S N +  K+ E+  S+ A LKGVVLKA H+A+AAL
Sbjct: 185 VAPYGVATGLT--SYNEETVKMVEDYCSATAILKGVVLKARHVADAAL 230

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BLAST of Lsi02G025080 vs. ExPASy Swiss-Prot
Match: O80714 (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-57
Identity = 116/227 (51.10%), Postives = 157/227 (69.16%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GK+ +ITG ASGIG + ARLF  +GA VV+ D+  +LGQ VA  IG D+ASF+ CDV
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IK 122
            +E +VE  V + VEKHG+LD+LFSNAG++  L S ++ D+  FD ++A         IK
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAAAFIK 124

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           H  +AMVE+  RGSI+CTTSVSA IGG     YT+SKH ++G++RS+C +LG YGIRVN 
Sbjct: 125 HAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVNG 184

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           V+PY + TP+      +   +LE+   +K  LKG+VLKASH+A+ AL
Sbjct: 185 VAPYAVATPMTSHD-EVTGKQLEDYFDAKGILKGMVLKASHVAQVAL 229

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BLAST of Lsi02G025080 vs. ExPASy Swiss-Prot
Match: F4J2Z7 (Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.3e-57
Identity = 118/226 (52.21%), Postives = 155/226 (68.58%), Query Frame = 0


Query: 4   LHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDVR 63
           L GK+A+ITG ASGIG E  RLF  +GA VV+ DI  +LGQ +A SIG+D+ASF+ C+V 
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 64  DEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IKH 123
           DE  VE  V + VEKHG+LD+LFSNAG++ +  S+++LD+  FD  +A         IKH
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKH 163

Query: 124 GGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNCV 183
             ++MV    RGSI+CTTS++A IGG    +YT+SKHA+LG++RS+C  LG YGIRVN V
Sbjct: 164 AARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNGV 223

Query: 184 SPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           +PYG+ T +           LEE   +  +LKGVVLKA HIAEAAL
Sbjct: 224 APYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAAL 269

[Close]

BLAST of Lsi02G025080 vs. ExPASy Swiss-Prot
Match: O80713 (Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-55
Identity = 119/231 (51.52%), Postives = 159/231 (68.83%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GK+A+ITG ASGIG E  RLF  +GA VV+ D   +LGQ VA S+G D+ASF+ CDV
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IK 122
            +EK+VE  V + VEK+G+LD+LFSNAG++    S ++L++  FD  +A         IK
Sbjct: 65  TNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIK 124

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           H  +AMVE+  RGSI+CTTSV++ IGG    AYT+SKHA+LG+V+S+C  LG YGIRVN 
Sbjct: 125 HAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVNG 184

Query: 183 VSPYGLVTPLACQSLNLDDNK----LEEVLSSKASLKGVVLKASHIAEAAL 222
           V+PY + T     ++N  D +    +EE  ++   LKGVVLKA H+AEAAL
Sbjct: 185 VAPYAVAT-----AINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAAL 230

[Close]

BLAST of Lsi02G025080 vs. ExPASy TrEMBL
Match: A0A5D3BE19 (Short-chain dehydrogenase reductase 3b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold670G00120 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 5.1e-94
Identity = 185/227 (81.50%), Postives = 202/227 (88.99%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RLHGKVALITGAASGIG ETARLFAANGAFVVVADID +LG KVAASIGIDQASFHHCDV
Sbjct: 8   RLHGKVALITGAASGIGAETARLFAANGAFVVVADIDDELGHKVAASIGIDQASFHHCDV 67

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDE QVEK VSY +EKHGRLDILFSNAGI GSL+SI ELDMS+FDN        VV++IK
Sbjct: 68  RDETQVEKIVSYTIEKHGRLDILFSNAGITGSLSSIRELDMSDFDNVMAINVRGVVSSIK 127

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HGG+AMVERNIRGSIICTTSV+A +GG+  MAYT SKHAVLGVVRSSC ELGAYGIRVNC
Sbjct: 128 HGGKAMVERNIRGSIICTTSVAATVGGMALMAYTCSKHAVLGVVRSSCAELGAYGIRVNC 187

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSPYG+ TPL CQSL ++++K EE++SSKASLKGVVLKASHIAEAAL
Sbjct: 188 VSPYGVATPLTCQSLKMEESKFEEIVSSKASLKGVVLKASHIAEAAL 234

[Close]

BLAST of Lsi02G025080 vs. ExPASy TrEMBL
Match: A0A1S4E355 (short-chain dehydrogenase reductase 3b-like OS=Cucumis melo OX=3656 GN=LOC103499995 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.4e-93
Identity = 183/227 (80.62%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RLHGKVALITGAASGIG ETARLFA NGAFVVV DID +LG KVAASIGIDQASFHHCDV
Sbjct: 8   RLHGKVALITGAASGIGAETARLFAGNGAFVVVVDIDDELGHKVAASIGIDQASFHHCDV 67

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDE QVEK VSY +EKHGRLDILFSNAGI GSL+SI ELDMS+FDN        VV++IK
Sbjct: 68  RDETQVEKIVSYTIEKHGRLDILFSNAGITGSLSSIRELDMSDFDNVMAINVRGVVSSIK 127

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HGG+AMVERNIRGSIICTTSV+A +GG+  MAYT SKHAVLGVVRSSC ELGAYGIRVNC
Sbjct: 128 HGGKAMVERNIRGSIICTTSVAATVGGMALMAYTCSKHAVLGVVRSSCAELGAYGIRVNC 187

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSPYG+ TPL CQSL ++++K EE++SSKASLKGVVLKASHIAEAAL
Sbjct: 188 VSPYGVATPLTCQSLKMEESKFEEIVSSKASLKGVVLKASHIAEAAL 234

[Close]

BLAST of Lsi02G025080 vs. ExPASy TrEMBL
Match: A0A6J1JWS9 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC111488170 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 6.3e-92
Identity = 183/227 (80.62%), Postives = 203/227 (89.43%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RLHGKVALITGAASGIGEETARLFAANGAFVVVADID +LG+KVAASIGIDQASFHHCDV
Sbjct: 6   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDNELGRKVAASIGIDQASFHHCDV 65

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDEKQVE+ VS+ VEKHGRLDILFSNAGIVGSL SI+ LD+S+FD+        VV TIK
Sbjct: 66  RDEKQVEEMVSHTVEKHGRLDILFSNAGIVGSLASILSLDISDFDDIFATNVRGVVGTIK 125

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HG +AMVE+NIRGSIICTTSVSAMIGG   MAYTSSKHAVLGVVRSS  ELGAYGIRVNC
Sbjct: 126 HGARAMVEKNIRGSIICTTSVSAMIGGAGPMAYTSSKHAVLGVVRSSSLELGAYGIRVNC 185

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSPYG+ TP+A ++LNL+D+KLEE++ SKASLKG VLKASH+A+AAL
Sbjct: 186 VSPYGVATPMARRALNLEDDKLEEIVCSKASLKGAVLKASHVAQAAL 232

[Close]

BLAST of Lsi02G025080 vs. ExPASy TrEMBL
Match: A0A0A0K851 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414460 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 9.1e-91
Identity = 180/227 (79.30%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GKVALITGAASGIG ETARLFAANGAFVV+ADID + G KV  SIGIDQASFHHCDV
Sbjct: 6   RLQGKVALITGAASGIGAETARLFAANGAFVVIADIDDEPGHKVVDSIGIDQASFHHCDV 65

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDE QVEK VSY ++KHGRLDILFSNAGI+GSL+SI ELDM +FDN        VVATIK
Sbjct: 66  RDESQVEKIVSYTIKKHGRLDILFSNAGIIGSLSSIRELDMFDFDNVMTTNVRGVVATIK 125

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HGG+AMVERNIRGSIICTTSV+A +GG+  MAYT SKHAVLGVVRSSC ELG YGIRVNC
Sbjct: 126 HGGRAMVERNIRGSIICTTSVAATVGGIALMAYTCSKHAVLGVVRSSCAELGVYGIRVNC 185

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSP G+ TPLACQSL ++++KLEE++SSKASLKGVVLKASHIAEAAL
Sbjct: 186 VSPNGVATPLACQSLKIEESKLEEIVSSKASLKGVVLKASHIAEAAL 232

[Close]

BLAST of Lsi02G025080 vs. ExPASy TrEMBL
Match: A0A6J1GPZ8 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC111456415 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 2.0e-90
Identity = 180/227 (79.30%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RLHGKVALITGAASGIGEETARLFAANGAFVVVADID +LG+KVAASIGIDQASFHHCDV
Sbjct: 6   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDNELGRKVAASIGIDQASFHHCDV 65

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDEKQVE+ VSY VEKHGRLDILFSNAGI+GSL SI+ LD+S+FD+        VV TIK
Sbjct: 66  RDEKQVEEMVSYTVEKHGRLDILFSNAGIMGSLASILSLDISDFDDIFATNVRGVVGTIK 125

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HG +AMVE+NIRGSIICTTSVSA IGG   MAYTSSKHAVLGVVRSS  ELGAYGIRVNC
Sbjct: 126 HGARAMVEKNIRGSIICTTSVSATIGGAGPMAYTSSKHAVLGVVRSSSLELGAYGIRVNC 185

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSPYG+ TP++ ++LNL+D  +EE++ SKASLKG VLKASH+AEAAL
Sbjct: 186 VSPYGVATPMSRRALNLEDRMIEEIVCSKASLKGAVLKASHVAEAAL 232

[Close]

BLAST of Lsi02G025080 vs. NCBI nr
Match: XP_038899500.1 (short-chain dehydrogenase reductase 3b-like [Benincasa hispida])

HSP 1 Score: 366.3 bits (939), Expect = 2.1e-97
Identity = 194/227 (85.46%), Postives = 207/227 (91.19%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RLHGKVALITGAASGIGEETARLFAANGA VV+ADI+ +LG+ VAASIGIDQASFHHCDV
Sbjct: 6   RLHGKVALITGAASGIGEETARLFAANGASVVIADINDELGRNVAASIGIDQASFHHCDV 65

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDE+QVEKTVSY VEKHGRLDILFSNAGIVGSLTSI++LDM NFDN        VVATIK
Sbjct: 66  RDEEQVEKTVSYTVEKHGRLDILFSNAGIVGSLTSILKLDMFNFDNIMATNVRGVVATIK 125

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HGGQAMVERNIRGSIICTTSVSA +GGV SMAYTSSKHAVLGVVRSSC ELG YGIRVNC
Sbjct: 126 HGGQAMVERNIRGSIICTTSVSATVGGVASMAYTSSKHAVLGVVRSSCMELGTYGIRVNC 185

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSPYG+ TPLA ++LNL++NKLEEVLSSK SLKGVVLKASHIAEAAL
Sbjct: 186 VSPYGVATPLAFRTLNLEENKLEEVLSSKTSLKGVVLKASHIAEAAL 232

[Close]

BLAST of Lsi02G025080 vs. NCBI nr
Match: KAA0058545.1 (short-chain dehydrogenase reductase 3b-like [Cucumis melo var. makuwa] >TYJ96901.1 short-chain dehydrogenase reductase 3b-like [Cucumis melo var. makuwa])

HSP 1 Score: 354.0 bits (907), Expect = 1.1e-93
Identity = 185/227 (81.50%), Postives = 202/227 (88.99%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RLHGKVALITGAASGIG ETARLFAANGAFVVVADID +LG KVAASIGIDQASFHHCDV
Sbjct: 8   RLHGKVALITGAASGIGAETARLFAANGAFVVVADIDDELGHKVAASIGIDQASFHHCDV 67

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDE QVEK VSY +EKHGRLDILFSNAGI GSL+SI ELDMS+FDN        VV++IK
Sbjct: 68  RDETQVEKIVSYTIEKHGRLDILFSNAGITGSLSSIRELDMSDFDNVMAINVRGVVSSIK 127

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HGG+AMVERNIRGSIICTTSV+A +GG+  MAYT SKHAVLGVVRSSC ELGAYGIRVNC
Sbjct: 128 HGGKAMVERNIRGSIICTTSVAATVGGMALMAYTCSKHAVLGVVRSSCAELGAYGIRVNC 187

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSPYG+ TPL CQSL ++++K EE++SSKASLKGVVLKASHIAEAAL
Sbjct: 188 VSPYGVATPLTCQSLKMEESKFEEIVSSKASLKGVVLKASHIAEAAL 234

[Close]

BLAST of Lsi02G025080 vs. NCBI nr
Match: XP_016902664.1 (PREDICTED: short-chain dehydrogenase reductase 3b-like [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 9.0e-93
Identity = 183/227 (80.62%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RLHGKVALITGAASGIG ETARLFA NGAFVVV DID +LG KVAASIGIDQASFHHCDV
Sbjct: 8   RLHGKVALITGAASGIGAETARLFAGNGAFVVVVDIDDELGHKVAASIGIDQASFHHCDV 67

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDE QVEK VSY +EKHGRLDILFSNAGI GSL+SI ELDMS+FDN        VV++IK
Sbjct: 68  RDETQVEKIVSYTIEKHGRLDILFSNAGITGSLSSIRELDMSDFDNVMAINVRGVVSSIK 127

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HGG+AMVERNIRGSIICTTSV+A +GG+  MAYT SKHAVLGVVRSSC ELGAYGIRVNC
Sbjct: 128 HGGKAMVERNIRGSIICTTSVAATVGGMALMAYTCSKHAVLGVVRSSCAELGAYGIRVNC 187

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSPYG+ TPL CQSL ++++K EE++SSKASLKGVVLKASHIAEAAL
Sbjct: 188 VSPYGVATPLTCQSLKMEESKFEEIVSSKASLKGVVLKASHIAEAAL 234

[Close]

BLAST of Lsi02G025080 vs. NCBI nr
Match: XP_022991608.1 (short-chain dehydrogenase reductase 3b-like [Cucurbita maxima])

HSP 1 Score: 347.1 bits (889), Expect = 1.3e-91
Identity = 183/227 (80.62%), Postives = 203/227 (89.43%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RLHGKVALITGAASGIGEETARLFAANGAFVVVADID +LG+KVAASIGIDQASFHHCDV
Sbjct: 6   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDNELGRKVAASIGIDQASFHHCDV 65

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDEKQVE+ VS+ VEKHGRLDILFSNAGIVGSL SI+ LD+S+FD+        VV TIK
Sbjct: 66  RDEKQVEEMVSHTVEKHGRLDILFSNAGIVGSLASILSLDISDFDDIFATNVRGVVGTIK 125

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HG +AMVE+NIRGSIICTTSVSAMIGG   MAYTSSKHAVLGVVRSS  ELGAYGIRVNC
Sbjct: 126 HGARAMVEKNIRGSIICTTSVSAMIGGAGPMAYTSSKHAVLGVVRSSSLELGAYGIRVNC 185

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSPYG+ TP+A ++LNL+D+KLEE++ SKASLKG VLKASH+A+AAL
Sbjct: 186 VSPYGVATPMARRALNLEDDKLEEIVCSKASLKGAVLKASHVAQAAL 232

[Close]

BLAST of Lsi02G025080 vs. NCBI nr
Match: XP_004136145.2 (short-chain dehydrogenase reductase 3b [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 1.9e-90
Identity = 180/227 (79.30%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GKVALITGAASGIG ETARLFAANGAFVV+ADID + G KV  SIGIDQASFHHCDV
Sbjct: 6   RLQGKVALITGAASGIGAETARLFAANGAFVVIADIDDEPGHKVVDSIGIDQASFHHCDV 65

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDN--------VVATIK 122
           RDE QVEK VSY ++KHGRLDILFSNAGI+GSL+SI ELDM +FDN        VVATIK
Sbjct: 66  RDESQVEKIVSYTIKKHGRLDILFSNAGIIGSLSSIRELDMFDFDNVMTTNVRGVVATIK 125

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           HGG+AMVERNIRGSIICTTSV+A +GG+  MAYT SKHAVLGVVRSSC ELG YGIRVNC
Sbjct: 126 HGGRAMVERNIRGSIICTTSVAATVGGIALMAYTCSKHAVLGVVRSSCAELGVYGIRVNC 185

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           VSP G+ TPLACQSL ++++KLEE++SSKASLKGVVLKASHIAEAAL
Sbjct: 186 VSPNGVATPLACQSLKIEESKLEEIVSSKASLKGVVLKASHIAEAAL 232

[Close]

BLAST of Lsi02G025080 vs. TAIR 10
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 236.1 bits (601), Expect = 3.0e-62
Identity = 117/227 (51.54%), Postives = 162/227 (71.37%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GK+ +ITG ASGIG E+ RLF  +GA VV+ D+  +LGQ VA SIG D+AS++HCDV
Sbjct: 5   RLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDV 64

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IK 122
            +E +VE  V + VEK+G+LD+LFSNAG++    SI++L+++  D  +A         IK
Sbjct: 65  TNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTAAFIK 124

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           H  +AMVE+ IRGSI+CTTSV+A I G     YT+SKH +LG+++S+   LG YGIRVN 
Sbjct: 125 HAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRVNG 184

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           V+P+G+ TPL C    ++ N +E+  S+ A+LKG+VLKA H+AEAAL
Sbjct: 185 VAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAAL 231

[Close]

BLAST of Lsi02G025080 vs. TAIR 10
Match: AT3G29260.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.8e-59
Identity = 124/228 (54.39%), Postives = 161/228 (70.61%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GK+ +ITG ASGIG E ARLF  +GA VV+ D+  +LGQ VA SIG+D+ASF+ CD+
Sbjct: 5   RLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDI 64

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IK 122
            DE +VE  V + VEKHG+LD+LFSNAG++    SI++LD+  FD  +A         IK
Sbjct: 65  TDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAAAFIK 124

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           H  ++MV    RGSI+CTTSV+A IGG    +YT+SKHA+LG+VRS+C  LG YGIRVN 
Sbjct: 125 HAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRVNG 184

Query: 183 VSPYGLVTPLACQSLNLDDNKL-EEVLSSKASLKGVVLKASHIAEAAL 222
           V+PYG+ T L   S N +  K+ E+  S+ A LKGVVLKA H+A+AAL
Sbjct: 185 VAPYGVATGLT--SYNEETVKMVEDYCSATAILKGVVLKARHVADAAL 230

[Close]

BLAST of Lsi02G025080 vs. TAIR 10
Match: AT3G29250.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 224.6 bits (571), Expect = 9.1e-59
Identity = 119/227 (52.42%), Postives = 156/227 (68.72%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GK+A+ITG ASGIG E  RLF  +GA VV+ DI  +LGQ +A SIG+D+ASF+ C+V
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNV 64

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IK 122
            DE  VE  V + VEKHG+LD+LFSNAG++ +  S+++LD+  FD  +A         IK
Sbjct: 65  TDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIK 124

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           H  ++MV    RGSI+CTTS++A IGG    +YT+SKHA+LG++RS+C  LG YGIRVN 
Sbjct: 125 HAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNG 184

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           V+PYG+ T +           LEE   +  +LKGVVLKA HIAEAAL
Sbjct: 185 VAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAAL 231

[Close]

BLAST of Lsi02G025080 vs. TAIR 10
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-58
Identity = 116/227 (51.10%), Postives = 157/227 (69.16%), Query Frame = 0


Query: 3   RLHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDV 62
           RL GK+ +ITG ASGIG + ARLF  +GA VV+ D+  +LGQ VA  IG D+ASF+ CDV
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 63  RDEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IK 122
            +E +VE  V + VEKHG+LD+LFSNAG++  L S ++ D+  FD ++A         IK
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAAAFIK 124

Query: 123 HGGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNC 182
           H  +AMVE+  RGSI+CTTSVSA IGG     YT+SKH ++G++RS+C +LG YGIRVN 
Sbjct: 125 HAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVNG 184

Query: 183 VSPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           V+PY + TP+      +   +LE+   +K  LKG+VLKASH+A+ AL
Sbjct: 185 VAPYAVATPMTSHD-EVTGKQLEDYFDAKGILKGMVLKASHVAQVAL 229

[Close]

BLAST of Lsi02G025080 vs. TAIR 10
Match: AT3G29250.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 222.2 bits (565), Expect = 4.5e-58
Identity = 118/226 (52.21%), Postives = 155/226 (68.58%), Query Frame = 0


Query: 4   LHGKVALITGAASGIGEETARLFAANGAFVVVADIDYKLGQKVAASIGIDQASFHHCDVR 63
           L GK+A+ITG ASGIG E  RLF  +GA VV+ DI  +LGQ +A SIG+D+ASF+ C+V 
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 64  DEKQVEKTVSYIVEKHGRLDILFSNAGIVGSLTSIIELDMSNFDNVVAT--------IKH 123
           DE  VE  V + VEKHG+LD+LFSNAG++ +  S+++LD+  FD  +A         IKH
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKH 163

Query: 124 GGQAMVERNIRGSIICTTSVSAMIGGVMSMAYTSSKHAVLGVVRSSCKELGAYGIRVNCV 183
             ++MV    RGSI+CTTS++A IGG    +YT+SKHA+LG++RS+C  LG YGIRVN V
Sbjct: 164 AARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNGV 223

Query: 184 SPYGLVTPLACQSLNLDDNKLEEVLSSKASLKGVVLKASHIAEAAL 222
           +PYG+ T +           LEE   +  +LKGVVLKA HIAEAAL
Sbjct: 224 APYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAAL 269

The following BLAST results are available for this feature:

BLAST of Lsi02G025080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K41	4.2e-61	51.54	Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b ...	[more]
F4J300	2.6e-58	54.39	Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE...	[more]
O80714	2.8e-57	51.10	Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c ...	[more]
F4J2Z7	6.3e-57	52.21	Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE...	[more]
O80713	1.2e-55	51.52	Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a ...	[more]

BLAST of Lsi02G025080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BE19	5.1e-94	81.50	Short-chain dehydrogenase reductase 3b-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4E355	4.4e-93	80.62	short-chain dehydrogenase reductase 3b-like OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A6J1JWS9	6.3e-92	80.62	short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0K851	9.1e-91	79.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414460 PE=4 SV=1	[more]
A0A6J1GPZ8	2.0e-90	79.30	short-chain dehydrogenase reductase 3b-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Lsi02G025080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899500.1	2.1e-97	85.46	short-chain dehydrogenase reductase 3b-like [Benincasa hispida]	[more]
KAA0058545.1	1.1e-93	81.50	short-chain dehydrogenase reductase 3b-like [Cucumis melo var. makuwa] >TYJ96901...	[more]
XP_016902664.1	9.0e-93	80.62	PREDICTED: short-chain dehydrogenase reductase 3b-like [Cucumis melo]	[more]
XP_022991608.1	1.3e-91	80.62	short-chain dehydrogenase reductase 3b-like [Cucurbita maxima]	[more]
XP_004136145.2	1.9e-90	79.30	short-chain dehydrogenase reductase 3b [Cucumis sativus]	[more]

BLAST of Lsi02G025080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47140.1	3.0e-62	51.54	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29260.1	1.8e-59	54.39	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.2	9.1e-59	52.42	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47120.1	2.0e-58	51.10	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.1	4.5e-58	52.21	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 168..185 score: 40.67 coord: 147..166 score: 34.42 coord: 80..91 score: 57.06 coord: 121..137 score: 30.31 coord: 8..25 score: 50.73
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 127..135 score: 44.44 coord: 80..91 score: 50.31 coord: 147..166 score: 31.71
None	No IPR available	GENE3D	3.40.50.720		coord: 1..225 e-value: 6.4E-54 score: 184.8
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 13..221 e-value: 3.8E-44 score: 151.0
None	No IPR available	PIRSR	PIRSR000095-1	PIRSR000095-1	coord: 10..185 e-value: 1.2E-14 score: 52.0
None	No IPR available	PIRSR	PIRSR000094-3	PIRSR000094-3	coord: 1..190 e-value: 2.9E-7 score: 27.7
None	No IPR available	PANTHER	PTHR42820	SHORT-CHAIN DEHYDROGENASE REDUCTASE	coord: 3..221
None	No IPR available	PANTHER	PTHR42820:SF16	SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B	coord: 3..221
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 2..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G025080.1	Lsi02G025080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity