Lsi02G025020 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGAAGGACAGCTTCTCTCTTGTGTGCAAGAGAGAGAGATCTATCATTCTATTTGGGGCCGATCTCTCTAATCCGCTCTCTTCAATTCCGTAAGTTTTTCATTCAATTTCCTTTTTCATTTCTCTCCAAGATCTGTCCACAATTCTGTCGATTTTACCCTTAATTTTGATCCTTCCTGCTTCGATCTGTGCTCCTGGTGATTCCCTCTTTTTCCCTGTTTTATCTTCGGTTGATCTTGGTATTGATTGTTCTTTTGTGGGTTTTGATTCATTTGTATTCTCTGATCTGGGTTTCTGTTTTCTCTGCCTTGACGTTTTGTGCTTGGATCTGATCTGATGACCCTTTTTGCTTTGAATTTCGTTCGCCATGTTTATACCTGGATTTGTGTTGATGCATGTGTTTAACCGATTGGTTGGATGTGTTCCTTTTGTGCTGGATCTAGCGGTGTAATTGATTTGGTTGTGATATAGCGATTGCTTGTTTCTTTTATTTGAATTATGGATGAAAATGGCATTCTGGTCTTGTTTGGAGTTTGATTTTGAATCTGGGCTATTTGATTTTTGAATTACTACTTTTTTTTTTTTGGGTTTTCTTTACATTTTTGGCTGATTTAAGTATCTGATGTCGTATTTTAAGGGGTAACTGATACCGGCTTATTGTATTTGTATTCAGTTTACTTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATCCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACGATCCTGTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATTGGTAAGTCGTTGTTTTTTTATCCATAACTACTGATTTCATGGATTAATAAATAGTGGAATTGATGCGTTTTCTTTACAACAATTTGATGCTTTGTCATTTGTTTTTAGATCGCAGCCATTGAACGTGTTTGTTTAACTTGGTAGTTCCCTGTGTCTTTGCATCATCAACATCGTGATCACAAAAATTTAAAGTTACTATAATGAATTGTTGTTTTATCCTTAAGGAGATTAATTTACAGAGGAACACTAGATAATTAATCTAATTAATAACCCAGGATCTATAAGGGCTCGCACTTGCATCTCTGATTTGTAGCCTCCACCCCAATTGTTCTCAATAGGGAATGGGGAATAACTCTTTTGTAATTTTGGGTTAATTAGAGGCTATGACTATGAGTGAACCTTACAATCATAACTTTCTGTCATAGTTAGACACAAGCTTCCAGACATGAGATTTTCGAAAAAGTGGGCTGATAGAAACAGTGATCTATTCATAGACTAAAGACTTTGACTTGACTGCTTGTTGTTATTCTGGTTTCTGTACAAGAAACTTTTTGTGATTACCTTTTTAACTTCGCACGATCTTAGTTAGTGATTACTTTTGTTGAAAATGTAGAATGTGATATCAGAGGTATAACTGACTTGCATATGACTTTGCAGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTTGGGGGTCAAGACAAGGTACGTTGATCGATCCTATTCTGTGCTGTTGACTTTTTACTTTCTCTATTTGATCATTTCAAGGTGCTAGATTTCTGACTGTGTGTTTAAATGATGATGATGTTGTTGTTGTCGTCGTACAGAGTTCCTTGACTATGGTACATTTGTAACTTGATAGATGCTTATTTTAAATCAATCTTAAATTGATTGATGTTAAAATCTGGATTGTCATTTTCCTTTTCCTTGTCTTACCTAGCTCTTTAGTCATAAGTATATATTTTACTAGTGAATCCCTTTAAACTTTTCAACTTTCTTAGGAGTGTTGGATTTAGAATTTTCTATTAAACATGTTTAAATAATTCGACACTTGTGCTTCCATGGACTCATAGTTGGTAGCCAATCATCTAGCACGTGGGTAATATGAGTTGTTCTCTCCACTGATTTGATGTCTATTTTGTTTCAAGATCCGACCATTGTGGAGGCATTATTTCCAAAATACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGTACTCATAATAAAAACTGATTATCAGACTTCTATAGCCTTTGCATAAGCTACCCCGAACAATTGTTTCATTCTAGTTTGTTGTCTAGACGATAACATGCATTGCACTTACAGGACGAGCTGAGGGATGCAGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACTGACAAGCTTGGTCTTCACTCCCTCCGACAACGTCACTGGTACATTTAATGATCATCAAACTCTTAACCCTTGCAATGGCTTAAAACTTTAAGTTAGTAATACATACAATGTCTTGAAATCCCGTTTCAGGTACATCCAGAGCACATGTGCCACATCTGGTGAAGGACTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGTAAAGAATAAGAATGTTCTGTGTTTTAGTTCGGTGCACAAATTTACTGCAAGACATAGTAGAAGACATCCGTTTAATAATTTGGATTGTCTAATTTTGTTGTCATTTAGATAACAATATTAGTTTTGCCAATGCAAAGTTTTACTGGAAAGGAACTATATTCTAAAGAATAAGAAGAGGGATAAGGAAATGAGGTGTTCCTTAATCAATCTAGTTGGGCTTTTAGTGTACAAAATTTACTAGCTCACGGTTGAACTTGGTCGGGTTGATAATATGATTGTTTCTTATTCCTTATTTGCAGGCGTAGATGGGGTTTCTTTTGAGCTGGGATTGGTTCTGGAAATTCAAATTGATGTCATTTGTCCATTGTTTACGGGCAATTTTGTTGGATTACCTGATCTATACGATGTTCCCTAGTGGATGATTTCTAGGTTGGTGTTGGATTCTGAATAATGAAAGAAATTTTGAAGTATTTGTCATGTTATCGACTCAATAGCATTGTTTTTTATGTAATGAATTAATGATGGTTCTTAAAATAGGTGTATTTGTACGAGAATCATGTTTGTTATTTGGAATGGATTGCTGAAAAGAAATCACTTTGGAATGGATTGCTGAAAAGAAATCACTTTGGAACTTTTATTGTATTACTATCTCTTCTTCTGCTACCATTATCAGTGGCTTGTGCTTCTGCAATGAACTTCTGATCTCTCACAGAGTATTTGAATTATACTAACTTTAAAGTTATAATGATAATGATTAGATCTGTTTCACT GTGAAGGACAGCTTCTCTCTTGTGTGCAAGAGAGAGAGATCTATCATTCTATTTGGGGCCGATCTCTCTAATCCGCTCTCTTCAATTCCGTAAGTTTTTCATTCAATTTCCTTTTTCATTTCTCTCCAAGATCTGTCCACAATTCTGTCGATTTTACCCTTAATTTTGATCCTTCCTGCTTCGATCTGTGCTCCTGTTTACTTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATCCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACGATCCTGTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATTGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTTGGGGGTCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAAAATACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGACGAGCTGAGGGATGCAGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACTGACAAGCTTGGTCTTCACTCCCTCCGACAACGTCACTGGTACATCCAGAGCACATGTGCCACATCTGGTGAAGGACTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGTAAAGAATAAGAATGTTCTGTGTTTTAGCGTAGATGGGGTTTCTTTTGAGCTGGGATTGGTTCTGGAAATTCAAATTGATGTCATTTGTCCATTGTTTACGGGCAATTTTGTTGGATTACCTGATCTATACGATGTTCCCTAGTGGATGATTTCTAGGTTGGTGTTGGATTCTGAATAATGAAAGAAATTTTGAAGTATTTGTCATGTTATCGACTCAATAGCATTGTTTTTTATGTAATGAATTAATGATGGTTCTTAAAATAGGTGTATTTGTACGAGAATCATGTTTGTTATTTGGAATGGATTGCTGAAAAGAAATCACTTTGGAATGGATTGCTGAAAAGAAATCACTTTGGAACTTTTATTGTATTACTATCTCTTCTTCTGCTACCATTATCAGTGGCTTGTGCTTCTGCAATGAACTTCTGATCTCTCACAGAGTATTTGAATTATACTAACTTTAAAGTTATAATGATAATGATTAGATCTGTTTCACT ATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATCCTCATGGTGGGTCTTGACGCAGCTGGTAAGACGACGATCCTGTACAAGCTCAAGCTGGGAGAAATTGTCACCACCATTCCTACCATTGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACCGTCTGGGATGTTGGGGGTCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAAAATACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGACGAGCTGAGGGATGCAGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCCAATGCCATGAATGCTGCTGAGATCACTGACAAGCTTGGTCTTCACTCCCTCCGACAACGTCACTGGTACATCCAGAGCACATGTGCCACATCTGGTGAAGGACTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGTAAAGAATAAGAATGTTCTGTGTTTTAGCGTAGATGGGGTTTCTTTTGAGCTGGGATTGGTTCTGGAAATTCAAATTGATGTCATTTGTCCATTGTTTACGGGCAATTTTGTTGGATTACCTGATCTATACGATGTTCCCTAG MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKVKNKNVLCFSVDGVSFELGLVLEIQIDVICPLFTGNFVGLPDLYDVP Homology
BLAST of Lsi02G025020 vs. ExPASy Swiss-Prot
Match: P51823 (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2) HSP 1 Score: 362.8 bits (930), Expect = 2.7e-99 Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy Swiss-Prot
Match: O48920 (ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3) HSP 1 Score: 362.1 bits (928), Expect = 4.7e-99 Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy Swiss-Prot
Match: P51822 (ADP-ribosylation factor 1 OS=Daucus carota OX=4039 GN=ARF1 PE=2 SV=2) HSP 1 Score: 361.3 bits (926), Expect = 8.0e-99 Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy Swiss-Prot
Match: Q9LQC8 (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2) HSP 1 Score: 361.3 bits (926), Expect = 8.0e-99 Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy Swiss-Prot
Match: P0DH91 (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 8.0e-99 Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy TrEMBL
Match: A0A6J1JM05 (ADP-ribosylation factor-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488101 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 7.5e-100 Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy TrEMBL
Match: A0A6J1KSR4 (ADP-ribosylation factor-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497893 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.2e-99 Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy TrEMBL
Match: A0A444XI53 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g096084 PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.7e-99 Identity = 183/189 (96.83%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy TrEMBL
Match: A0A4D6MD22 (Arf/Sar family OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g3031 PE=3 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98 Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0
BLAST of Lsi02G025020 vs. ExPASy TrEMBL
Match: Q9LYJ3 (ADP-ribosylation factor A1B OS=Arabidopsis thaliana OX=3702 GN=ADP-ribosylation factor A1B PE=3 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 1.8e-98 Identity = 181/186 (97.31%), Postives = 183/186 (98.39%), Query Frame = 0
BLAST of Lsi02G025020 vs. NCBI nr
Match: KAG7014291.1 (ADP-ribosylation factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375.9 bits (964), Expect = 2.4e-100 Identity = 194/219 (88.58%), Postives = 200/219 (91.32%), Query Frame = 0
BLAST of Lsi02G025020 vs. NCBI nr
Match: XP_022991507.1 (ADP-ribosylation factor-like isoform X1 [Cucurbita maxima] >XP_022991508.1 ADP-ribosylation factor-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 373.2 bits (957), Expect = 1.5e-99 Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0
BLAST of Lsi02G025020 vs. NCBI nr
Match: XP_023004666.1 (ADP-ribosylation factor-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 371.7 bits (953), Expect = 4.5e-99 Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of Lsi02G025020 vs. NCBI nr
Match: RYQ89434.1 (hypothetical protein Ahy_B09g096084 isoform B [Arachis hypogaea]) HSP 1 Score: 370.9 bits (951), Expect = 7.7e-99 Identity = 183/189 (96.83%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of Lsi02G025020 vs. NCBI nr
Match: KAG6774930.1 (hypothetical protein POTOM_018348 [Populus tomentosa]) HSP 1 Score: 369.8 bits (948), Expect = 1.7e-98 Identity = 186/220 (84.55%), Postives = 197/220 (89.55%), Query Frame = 0
BLAST of Lsi02G025020 vs. TAIR 10
Match: AT5G14670.1 (ADP-ribosylation factor A1B ) HSP 1 Score: 368.6 bits (945), Expect = 3.6e-102 Identity = 181/186 (97.31%), Postives = 183/186 (98.39%), Query Frame = 0
BLAST of Lsi02G025020 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F ) HSP 1 Score: 361.7 bits (927), Expect = 4.3e-100 Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of Lsi02G025020 vs. TAIR 10
Match: AT3G62290.1 (ADP-ribosylation factor A1E ) HSP 1 Score: 361.7 bits (927), Expect = 4.3e-100 Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of Lsi02G025020 vs. TAIR 10
Match: AT3G62290.2 (ADP-ribosylation factor A1E ) HSP 1 Score: 361.7 bits (927), Expect = 4.3e-100 Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of Lsi02G025020 vs. TAIR 10
Match: AT3G62290.3 (ADP-ribosylation factor A1E ) HSP 1 Score: 361.7 bits (927), Expect = 4.3e-100 Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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