Lsi02G024720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G024720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DNA mismatch repair protein
Location	chr02: 31219217 .. 31228581 (-)
RNA-Seq Expression	Lsi02G024720
Synteny	Lsi02G024720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCCGTCGCCACCAGATTCATCGAAGAACAAAATGTCATCATCTCGTCGATCCAGCAATGGCCGATCGCCATTAGTTAACCAACAACGTCAAATCACTTCCTTCTTTACCAAAAAACCCACCGGGGACAACTCCGCCGCTAATACCCATTCCATTTCCAGCCCGACTCCAAGCCCTAGCCCTAGCATTAATTCTCCTCCTTCAGTACAGTCCAAGCGCAAAAAACCCCTGTTGGTCATCGGCGCCGGCGCTGCACCTTCTTCTTCTTCTTCTTCCGGTCCTTCTCCTTTAGCTGCTGCGAAGGAGAAATCGCACGGCGATGGGGTTGTTGGGAAGAAGATAAAGGTTTATTGGCCGTTGGATAAAACTTGGTACGAGGGTCGTGTGAAAATGTTTGATGAGAAGGCTGGAAAGCATCTGGTACAGTATGACGATGCGGAGGAGGAGATGTTGGTGTTGGGGAATGAGAAGATTGAGTGGGTTGAGGAAAGTGCGAAGAAGTTCAAGCGATTGCGACGGGGCTCTTCAGCACCGGTGAGTGCTGCAGCGGTGGAAGATATGGAGGATTTTAACGATGGGGACGGCAGCGATGACTCTAAAGATGAAGATTGGGGGAAGAATGTGGAGAATGAGGTGAGTGAAGAGGAGGATGTGGAACTGGTGGAGGAAGATGAAGATGGGAGCGAGGAGGATGGAGTGGGAAAGTCAAGAAGGAAGCAAGGTGGGAAGGTGGAATCTAAAAAGCGTAAGATGAGCAATGGCGAGAAAGTTGAAAGTGCTCCAAAGAAGAGCAAGAGTAGCGGTGGAAGTGTAACTTCTGGAGGGTTCCGGCTTTCTTCAATGGAGTCTAAGATTAAATCTGAGAGTGAGTGATGAACATAAAATGCTTTAAGTCATTTGTCATCGCTGCATTATGTAATGCTGTGTATAATTCTCAAGAAGTACTTTAAACTATTAGATAAGTGTCTCCACTTATTTCCTGAGCTGAACTTTGTGATGGTGTTTCATTTGGTAGCAGTTATTGCTCTTACAGTCAGACTGAAGTAATCGAGAAGAGAATTTGGATTTGTGCAGTAGCCTTCTTAAGTCTGTTGAAATCATGAACCTTCTTAAACTGACTTTCTTATGAATATTGAAACTTGAAAGTATCTGTCTTTCTTATGTTTTTTATGTAGTTAGCTAAGTCTTCTCTTTCGGCGCTTAATGTATACCCTTTTTTCCCTCTCATCTTCCTAGGAGCGAGCGTATTAAATGGAATTAATGAAATTGCAAGCGATGCCTTAGAAAGGTTTAACTCGCGAGAAGCTGAAAAGTTCCGATTTCTAAAGGAGTAAGCTGTCTATATGTTTTTGTTTCTTACTTCTACATCATTTTCCCCATTTTATCATGAATATCCTTTACGTGATTAAGAAATAAGAAGAAAGTAAAGATTGATTCTCGCTAATCATAAAACGACCTAAAGTTTCATATCACATCTGAGCTTTTCCTTGCCATTTTGGTCTGTGATACTCACTATTTCACAAAATACCTGGATCCTTAAGCAGAGATAGGAAGGATGCGAACAAAAGACGTCCAGGAGATCCCGATTATGATCCAAGAACTTTGTATTTGCCTCCGTATTTCTTGAAGAATTTATCGGATGGCCAGGTATTTTAGTGTCGAACTTTTTTCTTGAAGTTTCTGGATTTTCTTGGTAGGAATGAAGTTTTATGAGTTTCTTTCCTTATTAATTTTCTGTGTACAGAGACAATGGTGGGAGTTTAAGTCAAAACACATGGATAAAGTTCTGTTTTTCAAGGTTCGCCTCTATGCTTCACTGGTTAACTGGTGGTTCATGCTACTGTTGGATAGTAATGCTCTTCCCATGTTTTTTCTGAAGCAGATGGGTAAATTTTATGAACTTTTCGAAATGGATGCACACGTAGGAGCCAAAGAACTTGATTTGCAGTATATGAAGGTAAGACAATAAGATATTTACTGGCGAAGTTACATTTCAGTAACCAGTCAATGTGAATGTATCAGTATGCGTGCTTTATGCAGGTTGTATTTTGTTGAGGCATTTCTTGCACAAAGTAGCCAATTTTCTCGCCATCTTATGCGCTGCACGATAAGATGTTTGCTATTGTTTCTCTAGTTGCTAACTAACATTTTTGTCTGAAAAAAATTGAAAGGGAGAACAACCTCATTGTGGCTTCCCCGAGAGGAACTTTTCACTTAATGTGGAGAAGTTGGCAAGGAAGGTTAGGTGTCATCATTTTTCCTCTTATTTGGGATTTATTTTTCCAGCTTATTGGTTTGATAAATCTTTTATAAGCTTTATGTTCCCAAGGTGACATTTAACCTAGCCTGCCTTGGCAGAGCAGGCTTATCGAGTTCTTGTCATAGAGCAGACAGAAACTCCAGAACAGTTAGAGCGACGACGTAAGGAGAAAGGTTCTAAGGACAAGGCATGTATGCATATCATAAGTTGCCTCATGTATTCAATTTAAATAATTACTTTCTACCCACAAAGAATAAGAATCATGCCCTCTCCCACCCCTTAGAAGTTTGATGCTAGGAATGAAACTCTTGAGGTGAGAATTGAGATCATAAGGCTATAATAATACTATTTGTTGTCTTGTCTGCAGGTAGTGAAACGTGAAATATGTGCAGTAGTCACAAAAGGAACACTAACTGAGGGTGAGATGCTATCTTTGAATCCTGATGCTTCATACCTGATGGCAGTAACTGAAAACTCCCATGGCTTGGAAAATCAACAAGCAGAACGGATTTTAGGGGTCTGTGTGGTTGATGTGGCCACCAGTAGGATTATCCTTGGGCAGGTAAAATGTTGAATAGAACTTAATCTCTTAACCCTCGTTTGAGTTTTTTCCCCTTGCTCATACTGTGGAAGATGATTGACGTGCCTACTTAGCCAACATATATTTAGGCATTTTCTTTTAAGGAATAGAAGGGAACCTATAAGAGAACTACCCAAAACTATACCGCAATATGAGAGATGGATTACAGAATGACAAAAGCTTTTCGAGAGGGCCATCTCTTTCTTAAAATTCCACAATGGACAATCCCCACCAAAATAATCACCTCCTCCAAGATCCTTAACTCCTATTTATCACCAAAACCTCCTAACTAATTACCACTATACCCTTTCTAATATCCTACTAATACAATATATCCCTTACTAGTCCTCTCACAGAACCATGTCTTGACTTTTGTCTTCTGGGACTATTGTGGGACTTGATTAATTGAATGAGTTGTCTATTTTTTTTATCGGTGATTATGCTTAGGTGTCTCATTGTATTACTAGCATTTTCACCAAGTGATGATATATGATAATCAATGTGCAGCACAGTACATCTATCAAATTATGTTTTTACTAATTTTCTGCTCTTTTCAATAGTTTGGAGATGATTCGGAGTGCAGTGCTTTATGCTGTCTTTTGTCCGAGCTTAGACCAGTTGAAATTATTAAACCTGCTAAACTGCTAAGTCCTGAAACTGAGAGGGTGCTACTCACTCATACAAGAAATCCTTTAGTGAATGAGTTAGTTCCATTATTGGAATTCTGGGATGCTGAGAAAAGTGTTCAAGAAGTCAAGAGATTGTTTAAGGGCATTGCTAATCGATCAGTCTCTGGATCTTCAAATGAAGCAAGTATACTCAATGAGAATGCTCCTGGAGAAAAAGATGGGTTCAGCTACTTGCCAAATGTTTTATCTGAACTAGTTAATGCACATGAAAATGGGTCTTGGGCACTTTCAGCTCTTGGAGGGATCCTATTCTATCTTAAGCAGGCTTTTCTGGATGAGACATTGCTTAGATTTGCAAAGTTTGAATTACTTCCTTGTTCTGGCTTCAGTGATGTTATTTCAAAACCCTACATGGTTCTTGATGCAGCTGCCTTGGAGAATCTAGAGATCTTTGAGAACAGCAGAAACGGGGACTCTTCTGGGTAGCCTTCTCTTTGACCACGTTCTTGAGTATTATCTATTATTGCTGTAAGCTTATTCTGAGAATTTTTCTCAAATTTCAATCTTGTTTTAGTACGCTCTATTCACAGTTGAACCACTGTGTGACTGCATTTGGGAAAAGATTACTTAAGACATGGCTTGCAAGACCTTTATATCACGTAGAATCAATCAAAGCTAGGCAAGGTGCTGTGGCGAGCCTACGGGTAGGTTTGATAATTACAGTAATGTAGCATTTTTTATAGAGTTGCTTCACTTTTATTTTCTGAAGCGTAAAAGCACATCCATTCTTATATATAACTTTTAAGGAGATTTCCTTTTCTGATTTTCTATATTTTCTTTCTAGGGAGATAACTTATCTTTTTCTCTTGAGTTTCGAAAAGCATTATCCAAACTCCCAGATATGGAGCGTTTACTTGCTCGCATTTTTGCGAATAGGTGAGGTCAAAGATCTGTTAGAAATAATAGTTTAGAGATGCAGTGGTTGTTAGAATAACTTTTATTCAATGATTGTCTTCTTAATAGTGAGGCAAATGGGAGGAATGCAAAAAATGTGGTTCTATATGAGGATGCAGCAAAAAAACAACTACAAGAGTTCATATCTGCTTTGCGTGGTTGTGAGCTCATGCTCCAAGCTTGTTCATCGCTCCGTGTCATTTTGTCAAATGTTGAATCAAGACGACTTGATTGCCTATTAACGCCTGGTATTATGATTTGTGATCTATTGTGTACTTAAGGGTTACTTCAACAGAATTATTGGAATTTGATGCTTTATTTATTTTAGGTGAAGGTCTTCCGGATCTTCTTTCAGTTCTAAGTCATTTCAAGGATGCTTTTGATTGGGTTGAAGCCAATAGTTCGGGACGTATAATACCTCGTGAAGGTGTAGACATGGAGTATGACTCTGCCTGTGAAAAAATTAAGGAGATACAATCTAGCTTGACAAAGCATTTAAAGGAACAGCGGAGATTACTTGGGGACACATCTGTGAGAAGCCTTCTTGAATCACTTTTATCCTTATGGTACATACATAATACTTGGAAGTTTCACGTTTGTTCAAACTTCTACAATTCTGCTTTTTTGTAGATCACTTATGTGACAGTTGGAAAAGAGACACATTTGTTGGAAGTGCCTGAAAGTTTGCAGGGTAACATTCCTCAGACTTATGAGCTGCGATCATCTAAAAAGGTAGTTGAAGCTTTTATAAGTTTTGTTTTTGCACTTACTTGAGTCAAATATCATGAGAATTGATGCACAAGTAGTTCTCCAATAGTCTTATTAGTAATATTTTAAAATTGTAGTTGGTACAGTGTAATGTACTCTGTCATCGGAACCATGTTGTGATTGTGTATATTCCTTTGATGAAAAACCTAACATATCCTTCCTAGCGTAGATATGTTCTTACATGTAAATTAGACGTTCTTCTTCTTTCTGCAACACAAATTTATGAACAATTGGATTTGGTTGTTTAACCTGAACCCTATCAACCTTCGTCAGGTGAGTATCGGTGTCATAACAACAGCCACAGGTCACTTATTTATTCTGTAGTTGGTGAGCAATAAGAATCACAAAGGAATTCCAATCACTTTCACTTTGTAGTTGGATTTGCATTGTTTCTAGTTTAAACTGAAAGCTCTATCTTTCCTATAATTTATTTTAGTCTATTATTATTATTTTTTAATTATCAGATTTATATCATATCATCATATGTCAACTGCGAGGTATACTCGTTCTTCTAATCAAATGCTCATCGTCTATCTCTTAAAAAAAGAGGACTTAGTTCTAGTAATTGATAACAACCTAAAACTAACTTGACCTTTATTGCCGTAAAATATCTTTGGTAAATCTAAATGCATTTTCACATTTTTCAATGATGCACCCAGGGCTTCTTCCGGTACTGGACTCCTAATATTAAGAAGTTGTTAGCGGAGCTTTTTCTAGCTGAATCTGAGAAGGAGTCCTCACTGAAAAGTATTTTGCAGAGGTTAATTGGAAAATTTTGTGAACATCATCTCCAATGGAGACAATTAGTCTCTGCAATTGCTGGTAGGTAGTTAGTATTCTCTTGTTAATGGATTGAAAATATTATTTTTCGTGGATACTAGTTAGTGTTGCATATCTAAGAGAACTATAATGATCATTGATTATGATGACCTCACACATGTAAACTATTATCCTTATCTATCATACAGGGGTAATCGAGTTTACTAATTAATAAATGCCTCAATTTACTCTCTCCTTTATGTCTTTATATCCTGGATTTGTGTGTGGGCCTTTTCTATTTACCCTATAAAATACACTGCTATGTTTTCAAGGTTGAACTATTATATTTTGTAATGTTCAGCTGGAGTGATATATATTCCTTTACCATATCAAGTCCAAAATGTTTCATGGCTAATGTTGGGGAAACTTCTTGCAGAACTTGATGTTTTGATCAGCCTAGCAATTGCAATTGATTATTATGAGGGACACACATGCCAACCACTTTTCTCAAAGTCACAGTGTCAGAATGAAGTGCCACGTTTTACTGCAAAAAACTTAGGACATCCTATTCTTAGAAGTGATTTGTTGGGAGAGGGTACATTTGTCCCCAATGACATTACTCTTGGTGGCTCAGGAGCCAACTTCATTCTTCTGACTGGCCCAAACATGGGTGGAAAGTCGACTCTTCTTCGGCAAGTTTGCTTGTCTGTTATTCTGGCTCAGGTAATTTTTTCTCTCCTTACTTTTAAATTTTAATCTTGAAAGTCTTGTTGTCTTCAATTTTTTCTAAAACAATGGTTCTGCAGATAGGTGCAGATGTTCCTGCAGAAAGTTTTGAGTTAGCTCCCGTTGATCGAATTTTTGTTCGGATGGGTGCTAAGGATCAGATTATGTCTGGTCAAAGTACATTTTTGACAGAACTATCAGAAACTGCACTGATGCTGGTAGGACATTGTTGCATTACAGATCAATTCAGTTACTTTGCAGCTTCAAGCGATTTAAGCTGTGTTGCCCTCCCCTTAGGGGCCTAAGCTGGCTGAAGTTTTTAAATATCTGAGAGAGTTCTCAGGATGAGAGGGCCTTTTAACTGCCTAGGATTTTTGTGATTTTTTTTTCCTGACGATTTGATGTCCTAGTTATTAAATCTCCCAAAAATCTGCGTATAAGTTTTATCCTTGGCTTAATTGTTAGTTTTCTTGTAAAAGGTCTTTTACCTCATGTCGCCAAAACTGCTGGACCTTTCCATGATACATTCTTTTCAAGGTATTTCTGCTTTCTTTATTGTCTGACTAAAAAGGATACGTTGAATTGGTTAATGCAGTCATCAGCTACCCGTAATTCATTGGTGATCTTGGATGAACTTGGACGTGGGACAGCAACTTCAGATGGACAGGCAATTGCGTAAGGGTTTAATTAATTTAGATTCATTATAGTATTTGGTTTCTTATCCAGAAAATTATAGTATTTAGTTTTTTCGTTCATTTGTGCTTGATTGTTATCTCAACTTAATATTCATCTGTTCTTCTGTCATCAACAGGGAATCAGTTCTTGAACATTTTGTTAGCAAGGTGCAGTGCAGGGGAGTATTCTCAACGCATTATCACCGATTGGCCTTGGCTTATTATAAAGATCCCAGGGTATTGTTCTTCTGCAAATCATTTGGGATTTGTTCACAGTTTCACGCATTAAAATACGTGCATATTGTTGTATACTTAACCATTAATACATTGCATCATAGCCCATAGGGATGTTAAGCTTTATTAAGCTTAAGTTAGTAGTACCACCGTAATTAGAGTTTTCCACCATGGAAAGACATCTCAATGATTTTCTCGGGATAATTGGTTCTGTTTGTTAACTAGAGGCTCTTCTACAGGTTTCATTATACCATATGGCATGTCGAGTTGGAGAGGGGAATAATGGTTTAGAAGAAGTTACATTTCTCTATCGCTTGACTCCTGGCACATGCCCCAAAAGTTATGGCGTGAATGTTGCACGGTTAGCTGGTAAGGCCTTGATTTTGATTTCAAGTTCGTTTGAGATGTTTGATTCACAGATTAAATAAGTCTGAGCTTGTTAAGTTTGTGATGGGTAGGTAGTGTGGATTTACCAGGTTTTCTTAGGATGGTACACAAAAATGACTTTCAAGAAACTTAAATTTATGTAACCTATATTTGGCTGTTGGGTTTCATGATTTAAAAAACTTGGTATAAATAATAAGTTGTTGATTAAGCCTAGGTTTATGTAACTTAAGTTTAGCTGATCCATAGCTTGGAATATGCAAACCCACCTACTAAATATTGGCTTGATTTCTTAATTTGAATTACACGTATTTGACCAATATCCAAGCACTCTTGAGTTACGTAAATACATACTGAAGCTATTCATTCTAGCCTGGTCCCTTGTTTATCAAAAATGCTATCTGAAGTTAACCAGAAACAATACAAGACACAAGGCAGATGAAAACCGTAGCACAGGAAAAATTTTAAGCATCATATCTATCAAGTATTTATGTGTTTTACGTGGTTGGCCTTTTCACCATGGATTCTAGTCGTACCTCTAACTGGCAAATGGTTCAAAAATATAAATTAACTATGATTTTTTAGGACTCCCAAATTGCGTATTGACCGAGGCTGCAGCTAAATCAATGGAATTTGAGGCTACATATGGCATGGCTGGAGAAGAATCTGAAGATAACTTGTGCAATCATGCTTGGGTAGATGACACAGTAACTTTGATTCAAAAGTTAATAAGCCTGGAATCAACCGTGAGATGCAATGATGAAACTGAGAAGAATGGTATCGGTTCCTTGAAACAGCTTCAACAACAAGCAAGAATACTTGTGCAGCAAGGTTGACTCGATGCTTAGAAACATTCATCGGTGACCAACGTTTTGCAGTATACCTCGGGGCGCTGCAGTTCATCCCATTTTGCCATTGCTTTCATCAGAAGCATCTGAACTGAGACTGGGAGCAAATCTCCATCACAAGAGAACGTTCAATATATAAGATCCAGCTTCTCACCTCATCTTAAGCCAGATTTGCTTATAGAATGAACTCACGACAGCGACCAACATTTTTTGAGAAGCCAGTTTGGAATACTGGTCGCTCATCTTGATTCTTCAATGGAAGAAGAAATTGCTTTTGATCTATTGTGTAAATTGTTAATAGTTGACAGTCATTACGAGGTTTGTAAATTATCGTCGAACTAAGCGCCTGAGAGTTTGGTCGCTATATCCAAGTTGGCAAAGCTTTCTACTTTTTTACTTTGCTATTAAGTCTCTTTGATTTTTAATTTTTTTTTTAGTTCACGGCTTCTTGATCTAGCGTATATGCCTAAAGAATTTGAACTACGTAAAGAATTAAATTTGAACTAAGTAAAGAATTAATTTTTGGTTAGTTGAGAGTTATTTGTATC

mRNA sequence

CCCCCCGTCGCCACCAGATTCATCGAAGAACAAAATGTCATCATCTCGTCGATCCAGCAATGGCCGATCGCCATTAGTTAACCAACAACGTCAAATCACTTCCTTCTTTACCAAAAAACCCACCGGGGACAACTCCGCCGCTAATACCCATTCCATTTCCAGCCCGACTCCAAGCCCTAGCCCTAGCATTAATTCTCCTCCTTCAGTACAGTCCAAGCGCAAAAAACCCCTGTTGGTCATCGGCGCCGGCGCTGCACCTTCTTCTTCTTCTTCTTCCGGTCCTTCTCCTTTAGCTGCTGCGAAGGAGAAATCGCACGGCGATGGGGTTGTTGGGAAGAAGATAAAGGTTTATTGGCCGTTGGATAAAACTTGGTACGAGGGTCGTGTGAAAATGTTTGATGAGAAGGCTGGAAAGCATCTGGTACAGTATGACGATGCGGAGGAGGAGATGTTGGTGTTGGGGAATGAGAAGATTGAGTGGGTTGAGGAAAGTGCGAAGAAGTTCAAGCGATTGCGACGGGGCTCTTCAGCACCGGTGAGTGCTGCAGCGGTGGAAGATATGGAGGATTTTAACGATGGGGACGGCAGCGATGACTCTAAAGATGAAGATTGGGGGAAGAATGTGGAGAATGAGGTGAGTGAAGAGGAGGATGTGGAACTGGTGGAGGAAGATGAAGATGGGAGCGAGGAGGATGGAGTGGGAAAGTCAAGAAGGAAGCAAGGTGGGAAGGTGGAATCTAAAAAGCGTAAGATGAGCAATGGCGAGAAAGTTGAAAGTGCTCCAAAGAAGAGCAAGAGTAGCGGTGGAAGTGTAACTTCTGGAGGGTTCCGGCTTTCTTCAATGGAGTCTAAGATTAAATCTGAGAGAGCGAGCGTATTAAATGGAATTAATGAAATTGCAAGCGATGCCTTAGAAAGGTTTAACTCGCGAGAAGCTGAAAAGTTCCGATTTCTAAAGGAAGATAGGAAGGATGCGAACAAAAGACGTCCAGGAGATCCCGATTATGATCCAAGAACTTTGTATTTGCCTCCGTATTTCTTGAAGAATTTATCGGATGGCCAGAGACAATGGTGGGAGTTTAAGTCAAAACACATGGATAAAGTTCTGTTTTTCAAGGTTCGCCTCTATGCTTCACTGGTTAACTGGTGGTTCATGCTACTGTTGGATAGTAATGCTCTTCCCATGTTTTTTCTGAAGCAGATGGGTAAATTTTATGAACTTTTCGAAATGGATGCACACGTAGGAGCCAAAGAACTTGATTTGCAGTATATGAAGGGAGAACAACCTCATTGTGGCTTCCCCGAGAGGAACTTTTCACTTAATGTGGAGAAGTTGGCAAGGAAGCCTGCCTTGGCAGAGCAGGCTTATCGAGTTCTTGTCATAGAGCAGACAGAAACTCCAGAACAGTTAGAGCGACGACGTAAGGAGAAAGGACAAGGCATGTATGCATATCATAAGTTGCCTCATGTATTCAATTTAAATAATTACTTTCTACCCACAAAGAATAAGAATCATGCCCTCTCCCACCCCTTAGAAGTAGTGAAACGTGAAATATGTGCAGTAGTCACAAAAGGAACACTAACTGAGGGTGAGATGCTATCTTTGAATCCTGATGCTTCATACCTGATGGCAGTAACTGAAAACTCCCATGGCTTGGAAAATCAACAAGCAGAACGGATTTTAGGGGTCTGTGTGGTTGATGTGGCCACCAGTAGGATTATCCTTGGGCAGTTTGGAGATGATTCGGAGTGCAGTGCTTTATGCTGTCTTTTGTCCGAGCTTAGACCAGTTGAAATTATTAAACCTGCTAAACTGCTAAGTCCTGAAACTGAGAGGGTGCTACTCACTCATACAAGAAATCCTTTAGTGAATGAGTTAGTTCCATTATTGGAATTCTGGGATGCTGAGAAAAGTGTTCAAGAAGTCAAGAGATTGTTTAAGGGCATTGCTAATCGATCAGTCTCTGGATCTTCAAATGAAGCAAGTATACTCAATGAGAATGCTCCTGGAGAAAAAGATGGGTTCAGCTACTTGCCAAATGTTTTATCTGAACTAGTTAATGCACATGAAAATGGGTCTTGGGCACTTTCAGCTCTTGGAGGGATCCTATTCTATCTTAAGCAGGCTTTTCTGGATGAGACATTGCTTAGATTTGCAAAGTTTGAATTACTTCCTTGTTCTGGCTTCAGTGATGTTATTTCAAAACCCTACATGGTTCTTGATGCAGCTGCCTTGGAGAATCTAGAGATCTTTGAGAACAGCAGAAACGGGGACTCTTCTGGTACGCTCTATTCACAGTTGAACCACTGTGTGACTGCATTTGGGAAAAGATTACTTAAGACATGGCTTGCAAGACCTTTATATCACGTAGAATCAATCAAAGCTAGGCAAGGTGCTGTGGCGAGCCTACGGGGAGATAACTTATCTTTTTCTCTTGAGTTTCGAAAAGCATTATCCAAACTCCCAGATATGGAGCGTTTACTTGCTCGCATTTTTGCGAATAGTGAGGCAAATGGGAGGAATGCAAAAAATGTGGTTCTATATGAGGATGCAGCAAAAAAACAACTACAAGAGTTCATATCTGCTTTGCGTGGTTGTGAGCTCATGCTCCAAGCTTGTTCATCGCTCCGTGTCATTTTGTCAAATGTTGAATCAAGACGACTTGATTGCCTATTAACGCCTGGTGAAGGTCTTCCGGATCTTCTTTCAGTTCTAAGTCATTTCAAGGATGCTTTTGATTGGGTTGAAGCCAATAGTTCGGGACGTATAATACCTCGTGAAGGTGTAGACATGGAGTATGACTCTGCCTGTGAAAAAATTAAGGAGATACAATCTAGCTTGACAAAGCATTTAAAGGAACAGCGGAGATTACTTGGGGACACATCTATCACTTATGTGACAGTTGGAAAAGAGACACATTTGTTGGAAGTGCCTGAAAGTTTGCAGGGTAACATTCCTCAGACTTATGAGCTGCGATCATCTAAAAAGATTTATATCATATCATCATATGTCAACTGCGAGGGCTTCTTCCGGTACTGGACTCCTAATATTAAGAAGTTGTTAGCGGAGCTTTTTCTAGCTGAATCTGAGAAGGAGTCCTCACTGAAAAGTATTTTGCAGAGGTTAATTGGAAAATTTTGTGAACATCATCTCCAATGGAGACAATTAGTCTCTGCAATTGCTGCTGGAGTGATATATATTCCTTTACCATATCAAGTCCAAAATGTTTCATGGCTAATGTTGGGGAAACTTCTTGCAGAACTTGATGTTTTGATCAGCCTAGCAATTGCAATTGATTATTATGAGGGACACACATGCCAACCACTTTTCTCAAAGTCACAGTGTCAGAATGAAGTGCCACGTTTTACTGCAAAAAACTTAGGACATCCTATTCTTAGAAGTGATTTGTTGGGAGAGGGTACATTTGTCCCCAATGACATTACTCTTGGTGGCTCAGGAGCCAACTTCATTCTTCTGACTGGCCCAAACATGGGTGGAAAGTCGACTCTTCTTCGGCAAGTTTGCTTGTCTGTTATTCTGGCTCAGATAGGTGCAGATGTTCCTGCAGAAAGTTTTGAGTTAGCTCCCGTTGATCGAATTTTTGTTCGGATGGGTGCTAAGGATCAGATTATGTCTGGTCAAAGTACATTTTTGACAGAACTATCAGAAACTGCACTGATGCTGTTACTTTGCAGCTTCAAGCGATTTAAGCTGTGTTGCCCTCCCCTTAGGGGCCTAAGCTGGCTGAATTTTCTTGTAAAAGGTCTTTTACCTCATGTCGCCAAAACTGCTGGACCTTTCCATGATACATTCTTTTCAAGGTATTTCTGCTTTCTTTATTGTCTGACTAAAAAGGATACGTTGAATTGGTTAATGCAGTCATCAGCTACCCGTAATTCATTGGTGATCTTGGATGAACTTGGACGTGGGACAGCAACTTCAGATGGACAGGCAATTGCGGAATCAGTTCTTGAACATTTTGTTAGCAAGGTGCAGTGCAGGGGAGTATTCTCAACGCATTATCACCGATTGGCCTTGGCTTATTATAAAGATCCCAGGGTTTCATTATACCATATGGCATGTCGAGTTGGAGAGGGGAATAATGGTTTAGAAGAAGTTACATTTCTCTATCGCTTGACTCCTGGCACATGCCCCAAAAGTTATGGCTTAACCAGAAACAATACAAGACACAAGGCAGATGAAAACCGTAGCACAGGAAAAATTTTAAGCATCATATCTATCAAGTATTTATGTGTTTTACGTGGACTCCCAAATTGCGTATTGACCGAGGCTGCAGCTAAATCAATGGAATTTGAGGCTACATATGGCATGGCTGGAGAAGAATCTGAAGATAACTTGTGCAATCATGCTTGGGTAGATGACACAGTAACTTTGATTCAAAAGTTAATAAGCCTGGAATCAACCGTGAGATGCAATGATGAAACTGAGAAGAATGGTATCGGTTCCTTGAAACAGCTTCAACAACAAGCAAGAATACTTGTGCAGCAAGGTTGACTCGATGCTTAGAAACATTCATCGGTGACCAACGTTTTGCAGTATACCTCGGGGCGCTGCAGTTCATCCCATTTTGCCATTGCTTTCATCAGAAGCATCTGAACTGAGACTGGGAGCAAATCTCCATCACAAGAGAACGTTCAATATATAAGATCCAGCTTCTCACCTCATCTTAAGCCAGATTTGCTTATAGAATGAACTCACGACAGCGACCAACATTTTTTGAGAAGCCAGTTTGGAATACTGGTCGCTCATCTTGATTCTTCAATGGAAGAAGAAATTGCTTTTGATCTATTGTGTAAATTGTTAATAGTTGACAGTCATTACGAGGTTTGTAAATTATCGTCGAACTAAGCGCCTGAGAGTTTGGTCGCTATATCCAAGTTGGCAAAGCTTTCTACTTTTTTACTTTGCTATTAAGTCTCTTTGATTTTTAATTTTTTTTTTAGTTCACGGCTTCTTGATCTAGCGTATATGCCTAAAGAATTTGAACTACGTAAAGAATTAAATTTGAACTAAGTAAAGAATTAATTTTTGGTTAGTTGAGAGTTATTTGTATC

Coding sequence (CDS)

ATGTCATCATCTCGTCGATCCAGCAATGGCCGATCGCCATTAGTTAACCAACAACGTCAAATCACTTCCTTCTTTACCAAAAAACCCACCGGGGACAACTCCGCCGCTAATACCCATTCCATTTCCAGCCCGACTCCAAGCCCTAGCCCTAGCATTAATTCTCCTCCTTCAGTACAGTCCAAGCGCAAAAAACCCCTGTTGGTCATCGGCGCCGGCGCTGCACCTTCTTCTTCTTCTTCTTCCGGTCCTTCTCCTTTAGCTGCTGCGAAGGAGAAATCGCACGGCGATGGGGTTGTTGGGAAGAAGATAAAGGTTTATTGGCCGTTGGATAAAACTTGGTACGAGGGTCGTGTGAAAATGTTTGATGAGAAGGCTGGAAAGCATCTGGTACAGTATGACGATGCGGAGGAGGAGATGTTGGTGTTGGGGAATGAGAAGATTGAGTGGGTTGAGGAAAGTGCGAAGAAGTTCAAGCGATTGCGACGGGGCTCTTCAGCACCGGTGAGTGCTGCAGCGGTGGAAGATATGGAGGATTTTAACGATGGGGACGGCAGCGATGACTCTAAAGATGAAGATTGGGGGAAGAATGTGGAGAATGAGGTGAGTGAAGAGGAGGATGTGGAACTGGTGGAGGAAGATGAAGATGGGAGCGAGGAGGATGGAGTGGGAAAGTCAAGAAGGAAGCAAGGTGGGAAGGTGGAATCTAAAAAGCGTAAGATGAGCAATGGCGAGAAAGTTGAAAGTGCTCCAAAGAAGAGCAAGAGTAGCGGTGGAAGTGTAACTTCTGGAGGGTTCCGGCTTTCTTCAATGGAGTCTAAGATTAAATCTGAGAGAGCGAGCGTATTAAATGGAATTAATGAAATTGCAAGCGATGCCTTAGAAAGGTTTAACTCGCGAGAAGCTGAAAAGTTCCGATTTCTAAAGGAAGATAGGAAGGATGCGAACAAAAGACGTCCAGGAGATCCCGATTATGATCCAAGAACTTTGTATTTGCCTCCGTATTTCTTGAAGAATTTATCGGATGGCCAGAGACAATGGTGGGAGTTTAAGTCAAAACACATGGATAAAGTTCTGTTTTTCAAGGTTCGCCTCTATGCTTCACTGGTTAACTGGTGGTTCATGCTACTGTTGGATAGTAATGCTCTTCCCATGTTTTTTCTGAAGCAGATGGGTAAATTTTATGAACTTTTCGAAATGGATGCACACGTAGGAGCCAAAGAACTTGATTTGCAGTATATGAAGGGAGAACAACCTCATTGTGGCTTCCCCGAGAGGAACTTTTCACTTAATGTGGAGAAGTTGGCAAGGAAGCCTGCCTTGGCAGAGCAGGCTTATCGAGTTCTTGTCATAGAGCAGACAGAAACTCCAGAACAGTTAGAGCGACGACGTAAGGAGAAAGGACAAGGCATGTATGCATATCATAAGTTGCCTCATGTATTCAATTTAAATAATTACTTTCTACCCACAAAGAATAAGAATCATGCCCTCTCCCACCCCTTAGAAGTAGTGAAACGTGAAATATGTGCAGTAGTCACAAAAGGAACACTAACTGAGGGTGAGATGCTATCTTTGAATCCTGATGCTTCATACCTGATGGCAGTAACTGAAAACTCCCATGGCTTGGAAAATCAACAAGCAGAACGGATTTTAGGGGTCTGTGTGGTTGATGTGGCCACCAGTAGGATTATCCTTGGGCAGTTTGGAGATGATTCGGAGTGCAGTGCTTTATGCTGTCTTTTGTCCGAGCTTAGACCAGTTGAAATTATTAAACCTGCTAAACTGCTAAGTCCTGAAACTGAGAGGGTGCTACTCACTCATACAAGAAATCCTTTAGTGAATGAGTTAGTTCCATTATTGGAATTCTGGGATGCTGAGAAAAGTGTTCAAGAAGTCAAGAGATTGTTTAAGGGCATTGCTAATCGATCAGTCTCTGGATCTTCAAATGAAGCAAGTATACTCAATGAGAATGCTCCTGGAGAAAAAGATGGGTTCAGCTACTTGCCAAATGTTTTATCTGAACTAGTTAATGCACATGAAAATGGGTCTTGGGCACTTTCAGCTCTTGGAGGGATCCTATTCTATCTTAAGCAGGCTTTTCTGGATGAGACATTGCTTAGATTTGCAAAGTTTGAATTACTTCCTTGTTCTGGCTTCAGTGATGTTATTTCAAAACCCTACATGGTTCTTGATGCAGCTGCCTTGGAGAATCTAGAGATCTTTGAGAACAGCAGAAACGGGGACTCTTCTGGTACGCTCTATTCACAGTTGAACCACTGTGTGACTGCATTTGGGAAAAGATTACTTAAGACATGGCTTGCAAGACCTTTATATCACGTAGAATCAATCAAAGCTAGGCAAGGTGCTGTGGCGAGCCTACGGGGAGATAACTTATCTTTTTCTCTTGAGTTTCGAAAAGCATTATCCAAACTCCCAGATATGGAGCGTTTACTTGCTCGCATTTTTGCGAATAGTGAGGCAAATGGGAGGAATGCAAAAAATGTGGTTCTATATGAGGATGCAGCAAAAAAACAACTACAAGAGTTCATATCTGCTTTGCGTGGTTGTGAGCTCATGCTCCAAGCTTGTTCATCGCTCCGTGTCATTTTGTCAAATGTTGAATCAAGACGACTTGATTGCCTATTAACGCCTGGTGAAGGTCTTCCGGATCTTCTTTCAGTTCTAAGTCATTTCAAGGATGCTTTTGATTGGGTTGAAGCCAATAGTTCGGGACGTATAATACCTCGTGAAGGTGTAGACATGGAGTATGACTCTGCCTGTGAAAAAATTAAGGAGATACAATCTAGCTTGACAAAGCATTTAAAGGAACAGCGGAGATTACTTGGGGACACATCTATCACTTATGTGACAGTTGGAAAAGAGACACATTTGTTGGAAGTGCCTGAAAGTTTGCAGGGTAACATTCCTCAGACTTATGAGCTGCGATCATCTAAAAAGATTTATATCATATCATCATATGTCAACTGCGAGGGCTTCTTCCGGTACTGGACTCCTAATATTAAGAAGTTGTTAGCGGAGCTTTTTCTAGCTGAATCTGAGAAGGAGTCCTCACTGAAAAGTATTTTGCAGAGGTTAATTGGAAAATTTTGTGAACATCATCTCCAATGGAGACAATTAGTCTCTGCAATTGCTGCTGGAGTGATATATATTCCTTTACCATATCAAGTCCAAAATGTTTCATGGCTAATGTTGGGGAAACTTCTTGCAGAACTTGATGTTTTGATCAGCCTAGCAATTGCAATTGATTATTATGAGGGACACACATGCCAACCACTTTTCTCAAAGTCACAGTGTCAGAATGAAGTGCCACGTTTTACTGCAAAAAACTTAGGACATCCTATTCTTAGAAGTGATTTGTTGGGAGAGGGTACATTTGTCCCCAATGACATTACTCTTGGTGGCTCAGGAGCCAACTTCATTCTTCTGACTGGCCCAAACATGGGTGGAAAGTCGACTCTTCTTCGGCAAGTTTGCTTGTCTGTTATTCTGGCTCAGATAGGTGCAGATGTTCCTGCAGAAAGTTTTGAGTTAGCTCCCGTTGATCGAATTTTTGTTCGGATGGGTGCTAAGGATCAGATTATGTCTGGTCAAAGTACATTTTTGACAGAACTATCAGAAACTGCACTGATGCTGTTACTTTGCAGCTTCAAGCGATTTAAGCTGTGTTGCCCTCCCCTTAGGGGCCTAAGCTGGCTGAATTTTCTTGTAAAAGGTCTTTTACCTCATGTCGCCAAAACTGCTGGACCTTTCCATGATACATTCTTTTCAAGGTATTTCTGCTTTCTTTATTGTCTGACTAAAAAGGATACGTTGAATTGGTTAATGCAGTCATCAGCTACCCGTAATTCATTGGTGATCTTGGATGAACTTGGACGTGGGACAGCAACTTCAGATGGACAGGCAATTGCGGAATCAGTTCTTGAACATTTTGTTAGCAAGGTGCAGTGCAGGGGAGTATTCTCAACGCATTATCACCGATTGGCCTTGGCTTATTATAAAGATCCCAGGGTTTCATTATACCATATGGCATGTCGAGTTGGAGAGGGGAATAATGGTTTAGAAGAAGTTACATTTCTCTATCGCTTGACTCCTGGCACATGCCCCAAAAGTTATGGCTTAACCAGAAACAATACAAGACACAAGGCAGATGAAAACCGTAGCACAGGAAAAATTTTAAGCATCATATCTATCAAGTATTTATGTGTTTTACGTGGACTCCCAAATTGCGTATTGACCGAGGCTGCAGCTAAATCAATGGAATTTGAGGCTACATATGGCATGGCTGGAGAAGAATCTGAAGATAACTTGTGCAATCATGCTTGGGTAGATGACACAGTAACTTTGATTCAAAAGTTAATAAGCCTGGAATCAACCGTGAGATGCAATGATGAAACTGAGAAGAATGGTATCGGTTCCTTGAAACAGCTTCAACAACAAGCAAGAATACTTGTGCAGCAAGGTTGA

Protein sequence

MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQSKRKKPLLVIGAGAAPSSSSSSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDMEDFNDGDGSDDSKDEDWGKNVENEVSEEEDVELVEEDEDGSEEDGVGKSRRKQGGKVESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDALERFNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAELFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPNDITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYGMAGEESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQG

Homology

[Close]

BLAST of Lsi02G024720 vs. ExPASy Swiss-Prot
Match: O04716 (DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana OX=3702 GN=MSH6 PE=1 SV=2)

HSP 1 Score: 1387.1 bits (3589), Expect = 0.0e+00
Identity = 819/1496 (54.75%), Postives = 978/1496 (65.37%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNS---------------AANTHSISSPT 60
            M+ SRR  +GRSPLVNQQRQITSFF K  +  +S                +N  +  SP+
Sbjct: 1    MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60

Query: 61   PSPS-----PSINSPPS-----------------VQSKRKKPLLVIGAGAAPSSSSSSGP 120
            PSPS     P +N  PS                 VQSK KKPLLVIG   +P  S     
Sbjct: 61   PSPSPPKKTPKLNPNPSSNLPARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSVVI-- 120

Query: 121  SPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKMFDEKAGKHLVQYDDAEEEMLVLG 180
                     ++GD VVGK+++VYWPLDK WY+G V  +D+  GKH+V+Y+D EEE L LG
Sbjct: 121  ---------TYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLG 180

Query: 181  NEKIEWV--EESAKKFKRLRRGSSA--PVSAAAVEDMEDFN---DGDGSDDSKDEDWGKN 240
             EK EWV  E+S  +F RL+RG+SA   V   + +D+E  N   D    DDS DEDWGKN
Sbjct: 181  KEKTEWVVGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDDSSDEDWGKN 240

Query: 241  VENEV--SEEEDVELVEE----DEDGSEEDGVGKSRRKQGGKVESKKRKMSNGEKVESAP 300
            V  EV  SEE+DVELV+E    +E+  EE     S+  +  K +S+KRK S   K     
Sbjct: 241  VGKEVCESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTK-SGGE 300

Query: 301  KKSKSSGGSVTSGGFRLSSMESKIKSERAS-VLNGI--NEIASDALERFNSREAEKFRFL 360
            KKSK+  G++   GF+ S +E   K  +A  V+ G+  N +  DAL RF +R++EKFRFL
Sbjct: 301  KKSKTDTGTILK-GFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFL 360

Query: 361  KEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMDKVLFFKVRLYAS 420
              DR+DA +RRP D +YDPRTLYLPP F+K L+ GQRQWWEFK+KHMDKV+FFK      
Sbjct: 361  GVDRRDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFK------ 420

Query: 421  LVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF 480
                                  MGKFYELFEMDAHVGAKELD+QYMKGEQPHCGFPE+NF
Sbjct: 421  ----------------------MGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNF 480

Query: 481  SLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHKLPHVFNLNNYFL 540
            S+N+EKL RK       YRVLV+EQTETP+QLE+RRKE G                    
Sbjct: 481  SVNIEKLVRK------GYRVLVVEQTETPDQLEQRRKETG-------------------- 540

Query: 541  PTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSHGLENQQAE 600
             +K+K         VVKRE+CAVVTKGTLT+GEML  NPDASYLMA+TE    L N  AE
Sbjct: 541  -SKDK---------VVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAE 600

Query: 601  RILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTHT 660
               GVC+VDVAT +IILGQF DD +CSAL CLLSE+RPVEIIKPAK+LS  TER ++  T
Sbjct: 601  HNFGVCLVDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQT 660

Query: 661  RNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNENAPGEKDGFSYL 720
            RNPLVN LVPL EFWD+EK++ EV  ++K I  +  S  S+E  IL        DG S+L
Sbjct: 661  RNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQPSSAYSSEGKILG-------DGSSFL 720

Query: 721  PNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSGFSDVISKPYM 780
            P +LSEL    +NGS ALSALGG ++YL+QAFLDE+LLRFAKFE LP   FS+V  K +M
Sbjct: 721  PKMLSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHM 780

Query: 781  VLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVESIKARQG 840
            VLDAAALENLEIFENSRNG  SGTLY+QLN C+TA GKRLLKTWLARPLY+ E IK RQ 
Sbjct: 781  VLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQD 840

Query: 841  AVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVVLYEDAAKKQLQE 900
            AVA LRG+NL +SLEFRK+LS+LPDMERL+AR+F++ EA+GRN   VVLYED AKKQ+QE
Sbjct: 841  AVAILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQE 900

Query: 901  FISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLSHFKDAFDWVEAN 960
            FIS LRGCE M +ACSSLR IL +  SRRL  LLTPG+ LP++ S + +FKDAFDWVEA+
Sbjct: 901  FISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAH 960

Query: 961  SSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKETHLLEVP 1020
            +SGR+IP EG D EYD AC+ ++E +SSL KHLKEQR+LLGD SI YVTVGK+ +LLEVP
Sbjct: 961  NSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVP 1020

Query: 1021 ESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAELFLAESEKESSLKSI 1080
            ESL G++P  YEL SSKK           G  RYWTP IKKLL EL  A+SEKES+LKSI
Sbjct: 1021 ESLSGSVPHDYELCSSKK-----------GVSRYWTPTIKKLLKELSQAKSEKESALKSI 1080

Query: 1081 LQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDVLISLAIAI 1140
             QRLIG+FCEH  +WRQLVSA                          AELDVLISLA A 
Sbjct: 1081 SQRLIGRFCEHQEKWRQLVSA-------------------------TAELDVLISLAFAS 1140

Query: 1141 DYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPNDITLGGS-GANFI 1200
            D YEG  C+P+ S S   + VP  +A  LGHP+LR D LG G+FVPN++ +GG+  A+FI
Sbjct: 1141 DSYEGVRCRPVISGS-TSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFI 1200

Query: 1201 LLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTF 1260
            LLTGPNMGGKSTLLRQVCL+VILAQIGADVPAE+FE++PVD+I VRMGAKD IM+GQSTF
Sbjct: 1201 LLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTF 1260

Query: 1261 LTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDTFFSRYFC 1320
            LTELSETA+ML                                                 
Sbjct: 1261 LTELSETAVML------------------------------------------------- 1285

Query: 1321 FLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGVF 1380
                            +SATRNSLV+LDELGRGTATSDGQAIAESVLEHF+ KVQCRG F
Sbjct: 1321 ----------------TSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFF 1285

Query: 1381 STHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYGLTRNNTRH 1440
            STHYHRL++ Y  +P+VSL HMAC++GEG  G+EEVTFLYRLTPG CPKSYG+       
Sbjct: 1381 STHYHRLSVDYQTNPKVSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVN------ 1285

Query: 1441 KADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYGMAGEESEDNL 1443
                               +  L GLP+ VL  A  KS EFEA YG    +++  L
Sbjct: 1441 -------------------VARLAGLPDYVLQRAVIKSQEFEALYGKNHRKTDHKL 1285

[Close]

BLAST of Lsi02G024720 vs. ExPASy Swiss-Prot
Match: E1BYJ2 (DNA mismatch repair protein Msh6 OS=Gallus gallus OX=9031 GN=MSH6 PE=3 SV=2)

HSP 1 Score: 548.9 bits (1413), Expect = 1.8e-154
Identity = 423/1340 (31.57%), Postives = 624/1340 (46.57%), Query Frame = 0


Query: 115  EGRVKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVE 174
            E   +  ++ +G      DD+  E  V GN+++              RGS+       V 
Sbjct: 180  EAEEEEMEQMSGSASGDSDDSNSEEDVKGNKRVP------------NRGSAIKAKRRRVL 239

Query: 175  DMEDFNDGDGSDDSKDEDWGKNVENEVS---EEEDVELVEEDEDGSEEDGVGKSRRKQGG 234
            D +  +D DGSD     D  +    E S   +E +   VE DE+  EE  +    +++ G
Sbjct: 240  DSD--SDRDGSDVEFKPDVKEASSEEASSGVDENEATDVETDEESIEESPIKVPSKRKRG 299

Query: 235  KVESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASD 294
             V    ++ S   +   APK++        S    L +     +S+  +   G N     
Sbjct: 300  NVSKPSKRSSLENEHSEAPKRAAPVSLEAKS-KLTLFAAPENFESQANACSGGTN----- 359

Query: 295  ALERFNSREAEKFRFLKE-DRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFK 354
                F + E EK  +L+E  +KDA++RR   PDYDP TLY+P  +L   + G R+WW+ K
Sbjct: 360  ---GFAAWEHEKLEWLQEGKKKDAHRRRQNHPDYDPCTLYVPEDYLNKCTPGMRRWWQLK 419

Query: 355  SKHMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDL 414
            S++ D V+ +KV                            GKFYEL+ MDA  G  EL L
Sbjct: 420  SQNFDAVICYKV----------------------------GKFYELYHMDAVTGVNELGL 479

Query: 415  QYMKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGM 474
             +MKG   H GFPE  F            L ++ Y++  +EQTETPE +E R K      
Sbjct: 480  IFMKGSWAHSGFPETAFG------RFSAILVQKGYKIARVEQTETPEMMEARCKATA--- 539

Query: 475  YAYHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDAS- 534
                   H    +                 +VV+REIC ++TKGT T   ++  +P  + 
Sbjct: 540  -------HTTKFD-----------------KVVRREICRIITKGTQTY-SIIDCDPTENH 599

Query: 535  --YLMAVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVE 594
              YL+ V E     E+   +R+ GVC VD +  +  +GQF DD  CS    L++   PV+
Sbjct: 600  NKYLLCVKEK----EDSSGQRVYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLVAHYTPVQ 659

Query: 595  IIKPAKLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEV--KRLFKGIANRSVSG 654
            ++     L+ +T+++L     + +   L+   +FW A K+++ +  +  FK   N++   
Sbjct: 660  VLFEKGNLTVDTQKILKGSLISCIQEGLISGSQFWSASKTLKVLLEEEYFK--ENQNTES 719

Query: 655  SSNEASILNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLL 714
                 S++ ++   E D     P          EN   ALSALGGI+FYLK+  +D+ LL
Sbjct: 720  GCVLPSVI-KSLTSESDSLGLTPG---------ENSELALSALGGIVFYLKKCLIDQELL 779

Query: 715  RFAKFEL---LPCSGFSDVISKPY-------MVLDAAALENLEIFENSRNGDSSGTLYSQ 774
              A FE    +       V S  +       MVLD   L NLE+ +N  NG + GTL  +
Sbjct: 780  SLANFEKYIPVDADNAKTVSSSNFFARTDRRMVLDGVTLMNLEVLQNGTNGTTEGTLLER 839

Query: 775  LNHCVTAFGKRLLKTWLARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMER 834
            ++ C T FGKRLLK WL  PL +  SI  R  AV  L       + E  + L KLPD+ER
Sbjct: 840  IDSCCTPFGKRLLKQWLCAPLCNPTSINDRLDAVEDLLAVPAKLT-EITEHLKKLPDLER 899

Query: 835  LLARIFA-NSEANGRN--AKNVVLYEDA--AKKQLQEFISALRGCELMLQACSSLRVILS 894
            LL++I +  S    +N      + YE+   +KK++ +F+SAL G ++M +   ++  + S
Sbjct: 900  LLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDAMEEVAS 959

Query: 895  NVESRRLDCLLT-----PGEGLPDLLSVLSHFKDAFDWVEANSSGRIIPREGVDMEYDSA 954
            + +S+ L  L+T     P    PDL + L  +  AFD  +A  +G I P+ G D +YD A
Sbjct: 960  DFKSQVLKQLVTRKAKHPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKA 1019

Query: 955  CEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKETHLLEVPESLQG-NIPQTYELRSSK 1014
             + IK ++     +L +QR+LLG  S+ Y   GK  + +E+PE+    N+P+ YEL+S++
Sbjct: 1020 LQDIKTVEEDFRTYLDKQRKLLGLKSVLYWGTGKNRYQMEIPETATSRNLPEEYELKSTR 1079

Query: 1015 KIYIISSYVNCEGFFRYWTPNIKKLLAELFLAESEKESSLKSILQRLIGKFCEHHLQWRQ 1074
            K           G+ RYWT  I+K+LAEL  AE  ++++LK  ++RL   F ++   W+ 
Sbjct: 1080 K-----------GYKRYWTKEIEKMLAELINAEERRDAALKDCMRRLFYNFDKNSQDWQT 1139

Query: 1075 LVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDVLISLAIAIDYYEGHTCQPLFSKSQC 1134
             V  IA                          LDVL+SLA      +G  C+P+      
Sbjct: 1140 AVQCIAV-------------------------LDVLMSLANYSQDGDGPLCRPVI-LLPV 1199

Query: 1135 QNEVPRFTAKNLGHPILRSDLLGEGTFVPNDITL------GGSGANFILLTGPNMGGKST 1194
             +  P    KN  HP +     G+  F+PNDI +      GGS A+ +L+TGPNMGGKST
Sbjct: 1200 DSAPPFLELKNARHPCITKTFFGD-DFIPNDIVIGSKDEDGGSEASCVLVTGPNMGGKST 1259

Query: 1195 LLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLL 1254
            L+RQ  L VI+AQ+G  VPAE   L P+DR+F R+GA D+IMSG+STF  ELSET+ +L 
Sbjct: 1260 LMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSIL- 1314

Query: 1255 LCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDTFFSRYFCFLYCLTKKDTLN 1314
                                                                        
Sbjct: 1320 ------------------------------------------------------------ 1314

Query: 1315 WLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYY 1374
                  AT +SLV++DELGRGTAT DG AIA +V+      ++CR +FSTHYH L   Y 
Sbjct: 1380 ----QHATEHSLVLVDELGRGTATFDGTAIASAVVRELAENIKCRTLFSTHYHSLVEDYS 1314

Query: 1375 KDPRVSLYHMACRVGEGNN--GLEEVTFLYRLTPGTCPKSYGLTRNNTRHKADENRSTG- 1408
                V L HMAC V   +     E +TFLY+   G CPKSYG          +E    G 
Sbjct: 1440 GSAAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGFNAARLADIPEEIIQKGH 1314

[Close]

BLAST of Lsi02G024720 vs. ExPASy Swiss-Prot
Match: P54276 (DNA mismatch repair protein Msh6 OS=Mus musculus OX=10090 GN=Msh6 PE=1 SV=3)

HSP 1 Score: 537.3 bits (1383), Expect = 5.3e-151
Identity = 434/1303 (33.31%), Postives = 607/1303 (46.58%), Query Frame = 0


Query: 122  DEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDMEDFND 181
            +E+   H     D  EE     +   E  EE+    +  RR S        + D E  +D
Sbjct: 205  EEETEVHEAYLSDKSEE-----DNYNESEEEAQPSVQGPRRSSRQVKKRRVISDSE--SD 264

Query: 182  GDGSD-----DSKDEDWGKNVENEVSEEEDVELVEEDEDGSEEDGVGKSRR---KQGGKV 241
              GSD     D+K E    +  + V + +  +L      G+   G  K +R    QGG +
Sbjct: 265  IGGSDVEFKPDTKQEGSSDDASSGVGDSDSEDL------GTFGKGAPKRKRAMVAQGG-L 324

Query: 242  ESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDAL 301
              K  K   G    + P  S++           LS+  +   SE  + ++G    +S   
Sbjct: 325  RRKSLKKETGSAKRATPILSETKS--------TLSAFSAPQNSESQTHVSGGGNDSSGPT 384

Query: 302  ERFNSREAEKFRFLK-EDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSK 361
              ++    E   +LK E R+D ++RRP  P+++P TLY+P  FL + + G R+WW+ KS+
Sbjct: 385  VWYH----ETLEWLKPEKRRDEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQ 444

Query: 362  HMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQY 421
            + D V+F+KV                            GKFYEL+ MDA +G  EL L +
Sbjct: 445  NFDLVIFYKV----------------------------GKFYELYHMDAVIGVSELGLIF 504

Query: 422  MKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYA 481
            MKG   H GFPE  F    + L +K       Y+V  +EQTETPE +E R +        
Sbjct: 505  MKGNWAHSGFPEIAFGRFSDSLVQK------GYKVARVEQTETPEMMEARCR-------- 564

Query: 482  YHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPD---AS 541
              K+ HV   +                  VV+REIC ++TKGT T   +L  +P    + 
Sbjct: 565  --KMAHVSKFD-----------------RVVRREICRIITKGTQTY-SVLDGDPSENYSR 624

Query: 542  YLMAVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEII 601
            YL+++ E     E     R+ GVC VD +  +  +GQF DD  CS    L++   PV+I+
Sbjct: 625  YLLSLKEKEE--ETSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQIL 684

Query: 602  KPAKLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNE 661
                 LS ET+ VL     + L   L+P  +FWDA K+   ++ L +G        SS  
Sbjct: 685  FEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATKT---LRTLLEGGYFTGNGDSSTV 744

Query: 662  ASILNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAK 721
              ++ +    E D     P   SEL         ALSALGGI+FYLK+  +D+ LL  A 
Sbjct: 745  LPLVLKGMTSESDSVGLTPGEESEL---------ALSALGGIVFYLKKCLIDQELLSMAN 804

Query: 722  F-ELLPCSGFSDVIS--KP---------YMVLDAAALENLEIFENSRNGDSSGTLYSQLN 781
            F E  P    SD +S  KP          MVLDA  L NLEIF N  NG + GTL  +L+
Sbjct: 805  FEEYFPLD--SDTVSTVKPGAVFTKASQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERLD 864

Query: 782  HCVTAFGKRLLKTWLARPLYHVESIKARQGAVASLRG--DNLSFSLEFRKALSKLPDMER 841
             C T FGKRLLK WL  PL    +I  R  AV  L    D ++   E    L KLPD+ER
Sbjct: 865  TCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVEDLMAVPDKVT---EVADLLKKLPDLER 924

Query: 842  LLARIF-ANSEANGRN--AKNVVLYEDA--AKKQLQEFISALRGCELMLQACSSLRVILS 901
            LL++I    S    +N      ++YE+   +KK++ +F+SAL G ++M +    L  +  
Sbjct: 925  LLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVSGLLEEVAG 984

Query: 902  NVESRRLDCLLT-----PGEGLPDLLSVLSHFKDAFDWVEANSSGRIIPREGVDMEYDSA 961
               S+ L  ++T     P    PDL + L  +  AFD  +A  +G I P+ G D +YD A
Sbjct: 985  GFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQA 1044

Query: 962  CEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKETHLLEVPESL-QGNIPQTYELRSSK 1021
               I+E + SL ++L +QR  LG  SI Y  +G+  + LE+PE+    N+P+ YEL+S+K
Sbjct: 1045 LADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTK 1104

Query: 1022 KIYIISSYVNCEGFFRYWTPNIKKLLAELFLAESEKESSLKSILQRLIGKFCEHHLQWRQ 1081
            K           G  RYWT  I+K LA L  AE  +++SLK  ++RL   F ++H  W+ 
Sbjct: 1105 K-----------GCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFCNFDKNHKDWQS 1164

Query: 1082 LVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDVLISLAIAIDYYEGHTCQPLFSKSQC 1141
             V  IA                          LDVL+ LA      +G  C+P       
Sbjct: 1165 AVECIAV-------------------------LDVLLCLANYSQGGDGPMCRPEIVLPG- 1224

Query: 1142 QNEVPRFTAKNLGHPILRSDLLGEGTFVPNDITLG-------GSGANFILLTGPNMGGKS 1201
            ++  P    K   HP +     G+  F+PNDI +G          A  +L+TGPNMGGKS
Sbjct: 1225 EDTHPFLEFKGSRHPCITKTFFGD-DFIPNDILIGCEEEAEEHGKAYCVLVTGPNMGGKS 1284

Query: 1202 TLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALML 1261
            TL+RQ  L  ++AQ+G  VPAE   L PVDR+F R+GA D+IMSG+STF  ELSETA +L
Sbjct: 1285 TLIRQAGLLAVMAQLGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASIL 1297

Query: 1262 LLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDTFFSRYFCFLYCLTKKDTL 1321
                                                                        
Sbjct: 1345 ------------------------------------------------------------ 1297

Query: 1322 NWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAY 1379
                   AT +SLV++DELGRGTAT DG AIA +V++     ++CR +FSTHYH L   Y
Sbjct: 1405 -----RHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDY 1297

[Close]

BLAST of Lsi02G024720 vs. ExPASy Swiss-Prot
Match: P52701 (DNA mismatch repair protein Msh6 OS=Homo sapiens OX=9606 GN=MSH6 PE=1 SV=2)

HSP 1 Score: 521.2 bits (1341), Expect = 4.0e-146
Identity = 419/1280 (32.73%), Postives = 603/1280 (47.11%), Query Frame = 0


Query: 144  NEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDMEDFNDGDGSD-----DSKDEDWGKNVE 203
            + +IE  EE   K +  RR S        + D E  +D  GSD     D+K+E     + 
Sbjct: 222  DNEIESEEEVQPKTQGSRRSSRQIKKRRVISDSE--SDIGGSDVEFKPDTKEEGSSDEIS 281

Query: 204  NEVSEEEDVELVEEDEDGSEEDGVGKSRRKQGGKVESKKRKMSNGEKVESAPKKSKSSGG 263
            + V +        E E  +    V + R++      S KRK S  E   +   K  +S  
Sbjct: 282  SGVGD-------SESEGLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSAT--KQATSIS 341

Query: 264  SVTSGGFRLSSMESKIKSERASVLNGINEIASDALERFNSREAEKFRFLKED-RKDANKR 323
            S T    R  S     +S+ A V  G      D   R      E   +LKE+ R+D ++R
Sbjct: 342  SETKNTLRAFSAPQNSESQ-AHVSGG-----GDDSSRPTVWYHETLEWLKEEKRRDEHRR 401

Query: 324  RPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMDKVLFFKVRLYASLVNWWFMLLL 383
            RP  PD+D  TLY+P  FL + + G R+WW+ KS++ D V+ +KV               
Sbjct: 402  RPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKV--------------- 461

Query: 384  DSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSLNVEKLARK 443
                         GKFYEL+ MDA +G  EL L +MKG   H GFPE  F    + L +K
Sbjct: 462  -------------GKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQK 521

Query: 444  PALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHKLPHVFNLNNYFLPTKNKNHALS 503
                   Y+V  +EQTETPE +E R +          K+ H+   +              
Sbjct: 522  ------GYKVARVEQTETPEMMEARCR----------KMAHISKYD-------------- 581

Query: 504  HPLEVVKREICAVVTKGTLTEGEMLSLNPD---ASYLMAVTENSHGLENQQAERILGVCV 563
                VV+REIC ++TKGT T   +L  +P    + YL+++ E     ++    R  GVC 
Sbjct: 582  ---RVVRREICRIITKGTQTY-SVLEGDPSENYSKYLLSLKEKEE--DSSGHTRAYGVCF 641

Query: 564  VDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTHTRNPLVNE 623
            VD +  +  +GQF DD  CS    L++   PV+++     LS ET+ +L +     L   
Sbjct: 642  VDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKTILKSSLSCSLQEG 701

Query: 624  LVPLLEFWDAEKSVQEV--KRLFKGIANRSVSGSSNEASILNENAPGEKDGFSYLPNVLS 683
            L+P  +FWDA K+++ +  +  F+    +   G       + +    E D     P   S
Sbjct: 702  LIPGSQFWDASKTLRTLLEEEYFR---EKLSDGIGVMLPQVLKGMTSESDSIGLTPGEKS 761

Query: 684  ELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKF-ELLPCSGFSDVIS-------- 743
            EL         ALSALGG +FYLK+  +D+ LL  A F E +P    SD +S        
Sbjct: 762  EL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLD--SDTVSTTRSGAIF 821

Query: 744  -KPY--MVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVE 803
             K Y  MVLDA  L NLEIF N  NG + GTL  +++ C T FGKRLLK WL  PL +  
Sbjct: 822  TKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHY 881

Query: 804  SIKARQGAVASLR--GDNLSFSLEFRKALSKLPDMERLLARIF-ANSEANGRN--AKNVV 863
            +I  R  A+  L    D +S   E  + L KLPD+ERLL++I    S    +N      +
Sbjct: 882  AINDRLDAIEDLMVVPDKIS---EVVELLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAI 941

Query: 864  LYEDA--AKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLT-----PGEGLP 923
            +YE+   +KK++ +F+SAL G ++M +    +  +    +S+ L  +++     P    P
Sbjct: 942  MYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKNPEGRFP 1001

Query: 924  DLLSVLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLG 983
            DL   L+ +  AFD  +A  +G I P+ G D +YD A   I+E + SL ++L++QR  +G
Sbjct: 1002 DLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRIG 1061

Query: 984  DTSITYVTVGKETHLLEVPESL-QGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIK 1043
              +I Y  +G+  + LE+PE+    N+P+ YEL+S+KK           G  RYWT  I+
Sbjct: 1062 CRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKK-----------GCKRYWTKTIE 1121

Query: 1044 KLLAELFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSW 1103
            K LA L  AE  ++ SLK  ++RL   F +++  W+  V  IA                 
Sbjct: 1122 KKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAV---------------- 1181

Query: 1104 LMLGKLLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLG 1163
                     LDVL+ LA      +G  C+P+      ++  P    K   HP +     G
Sbjct: 1182 ---------LDVLLCLANYSRGGDGPMCRPVILLP--EDTPPFLELKGSRHPCITKTFFG 1241

Query: 1164 EGTFVPNDITLG-------GSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAES 1223
            +  F+PNDI +G          A  +L+TGPNMGGKSTL+RQ  L  ++AQ+G  VPAE 
Sbjct: 1242 D-DFIPNDILIGCEEEEQENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEV 1299

Query: 1224 FELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNF 1283
              L P+DR+F R+GA D+IMSG+STF  ELSETA +L+                      
Sbjct: 1302 CRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILM---------------------- 1299

Query: 1284 LVKGLLPHVAKTAGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGT 1343
                                                        AT +SLV++DELGRGT
Sbjct: 1362 -------------------------------------------HATAHSLVLVDELGRGT 1299

Query: 1344 ATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGE--GNNG 1379
            AT DG AIA +V++     ++CR +FSTHYH L   Y ++  V L HMAC V     +  
Sbjct: 1422 ATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECEDPS 1299

[Close]

BLAST of Lsi02G024720 vs. ExPASy Swiss-Prot
Match: Q9VUM0 (Probable DNA mismatch repair protein Msh6 OS=Drosophila melanogaster OX=7227 GN=Msh6 PE=1 SV=2)

HSP 1 Score: 443.4 bits (1139), Expect = 1.1e-122
Identity = 392/1270 (30.87%), Postives = 571/1270 (44.96%), Query Frame = 0


Query: 133  DDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDMEDFNDGDGSDDSKDED 192
            D  +E        K+   ++     +R R+    P S +  E     ++ D SD + D +
Sbjct: 59   DGKKEASKPAAKRKLPISDDEPASGQRKRKRIVQPESDSEPEMEVTKSEDDFSDCASDYE 118

Query: 193  WGKNVENEVSEEEDVELVEEDE-DGSEEDGVGKSRRKQGGKVESKKRKMSNGEKVESAPK 252
              +N  ++ S     E V   E D S +    K  RK+   + +      + +KV+    
Sbjct: 119  PDENEASDDSVSSGAEEVSPSENDMSVDSPTPKKSRKKSKILNNNNNNEPSSKKVKLEST 178

Query: 253  KSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDALERFNSREAEKFRFLKEDR 312
               + G +      +L +++S  K + AS  + +   ++  L+       +K  FL+ D+
Sbjct: 179  IQLAEGATFQE---KLKNLQSNAKQD-ASYDDIVTNTSN--LDEPVVWPHQKLEFLQPDK 238

Query: 313  -KDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMDKVLFFKVRLYASLVN 372
             KD   RRP  PDYD  TL++P  FL  LS G RQWW  KS + D VLFFKV        
Sbjct: 239  IKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFKV-------- 298

Query: 373  WWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSLN 432
                                GKFYEL+ MDA VG  EL   YM+GE  H GFPE +F   
Sbjct: 299  --------------------GKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISF--- 358

Query: 433  VEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHKLPHVFNLNNYFLPTK 492
             +K++    L ++ ++V  +EQTETP+ +  R K                        TK
Sbjct: 359  -DKMS--TILVDRGFKVARVEQTETPDMMTERCKR--------------------IKATK 418

Query: 493  NKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPD--ASYLMAVTENSHGLENQQAER 552
                      +VV REIC +  +GT   G    + P+   +Y++A+ E   G  ++    
Sbjct: 419  FD--------KVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEKDEGTCSR---- 478

Query: 553  ILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTHTR 612
              GVC +D +     LG+F DD  CS L  L+S   PV  +     LS  T++++ T   
Sbjct: 479  -YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQIVRT-VL 538

Query: 613  NPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVS--GSSNEASILNENAPGEKDGFSY 672
              ++ E VP        K     ++  K +A R  +  GS +   ++      + D    
Sbjct: 539  GGILKEPVP-----GNGKHACSAEKTLKLLAERYYAGPGSDDNWPLVLRTMQSDMDHLGL 598

Query: 673  LPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL-LPCSGFSD----- 732
             PN         +N   AL ALG  +F++ +  L+  +L  A+++L +P    +D     
Sbjct: 599  TPN---------DNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQLADAKPAV 658

Query: 733  --VISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYH 792
               + + +MVLDA  L NL I           +L S L+HC T FGKRLL  WL  P   
Sbjct: 659  ASTLRRSHMVLDATTLSNLRIIGEEH------SLLSTLDHCCTKFGKRLLHHWLCAPSCD 718

Query: 793  VESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARI--FANSEANGRN--AKNV 852
            V  IK RQ A+  L         E R  L+ +PD ER LA+I  F N +    +      
Sbjct: 719  VSVIKERQDAIGELIRMPTELQ-EVRALLAPMPDFERNLAQIHLFGNKQIKQMDHPDSRA 778

Query: 853  VLYEDAA--KKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLS 912
            +L+E+    K++LQ F++ L+G   + +  +      + +  +R+  L   G   PDL  
Sbjct: 779  ILFEEKLYNKQKLQGFMAVLKGFNDLTKLPTMFHQCKTTL-LKRITQLPESGGSFPDLSK 838

Query: 913  VLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSI 972
             L +F  AFD   A  +G I P+ G+D EYD+A + I E++  L  +L EQ R  G   I
Sbjct: 839  ELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEVEKRLKTYLVEQERHFG-CRI 898

Query: 973  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAE 1032
            TY    K+ + L+VPES      ++Y L    K          +   RY T   + LL +
Sbjct: 899  TYFGSDKKRYQLDVPESHASKANKSYTLEGQTK--------GKKPSRRYTTAETRALLKD 958

Query: 1033 LFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGK 1092
            +  AE  +   LK + +RL  KF  H+ QW+Q +  +                       
Sbjct: 959  MQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCV----------------------- 1018

Query: 1093 LLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFV 1152
              A LDVL SLA     Y G        +     + P    +   HP   +      T++
Sbjct: 1019 --ANLDVLGSLA----EYAGQQMVICVPELVSDADQPFIQLEEGYHPCANA-----STYI 1078

Query: 1153 PNDITLG-GSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFV 1212
            PN + LG  S A   LLTGPNMGGKSTL+R+V L VI+AQIGA +PA S  L+ VDRIF 
Sbjct: 1079 PNGLELGTASEAPLSLLTGPNMGGKSTLMREVGLLVIMAQIGAHIPAASCRLSLVDRIFT 1123

Query: 1213 RMGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAK 1272
            R+GA+D I++G STFL EL+ET+L+L                                  
Sbjct: 1139 RLGAQDDILAGHSTFLVELNETSLIL---------------------------------- 1123

Query: 1273 TAGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAES 1332
                                             AT +SLV+LDELGRGTAT DG AIA S
Sbjct: 1199 -------------------------------KHATCHSLVLLDELGRGTATYDGTAIAAS 1123

Query: 1333 VLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNG---LEEVTFLYRL 1379
            V+ +F++ ++CR +FSTHYH L   ++ D R++L HMAC V   +N     E VTFLY+ 
Sbjct: 1259 VV-NFLANLKCRTLFSTHYHNLIDFFHNDKRITLGHMACMVENEDNADPTQETVTFLYKY 1123

[Close]

BLAST of Lsi02G024720 vs. ExPASy TrEMBL
Match: A0A1S3BQZ5 (DNA mismatch repair protein OS=Cucumis melo OX=3656 GN=LOC103492760 PE=3 SV=1)

HSP 1 Score: 2261.1 bits (5858), Expect = 0.0e+00
Identity = 1222/1501 (81.41%), Postives = 1261/1501 (84.01%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAA THSIS+ TPSPSP+INSPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAARTHSISTLTPSPSPNINSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSS---SSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGR 120
            KRKKPLLVIG GA P SSS   S GPS L   +EKSHGDGV+GKKIKVYWPLDKTWYEGR
Sbjct: 61   KRKKPLLVIGGGAGPFSSSPSPSPGPSSLPDKEEKSHGDGVIGKKIKVYWPLDKTWYEGR 120

Query: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDME 180
            VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSS+PV+AA VEDM+
Sbjct: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSSPVTAAVVEDMD 180

Query: 181  DFN---DGDGSDDSKDEDWGKNVENEVSEEEDVELVE--EDEDGSEEDGVGKSRRKQGGK 240
            D N   DGDGSDDS+DEDW KNVENEVSEEEDV+LVE  EDEDGSEED VGKSRRKQGG+
Sbjct: 181  DINDLSDGDGSDDSRDEDWEKNVENEVSEEEDVDLVEEDEDEDGSEEDAVGKSRRKQGGQ 240

Query: 241  VESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDA 300
            VESKKRKMSNG+KVE APKK KSSGGSVTSGG +LSSME+KIKSE ASVL GINEIASDA
Sbjct: 241  VESKKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQLSSMETKIKSESASVLKGINEIASDA 300

Query: 301  LERFNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSK 360
            LERFNSREAEKFRFLKEDRKDANKR PGDPDYDP+TLYLPPYF+KNLSDGQRQWWEFKSK
Sbjct: 301  LERFNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLYLPPYFVKNLSDGQRQWWEFKSK 360

Query: 361  HMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQY 420
            HMDKVLFFK                            MGKFYELFEMDAH+GAKELDLQY
Sbjct: 361  HMDKVLFFK----------------------------MGKFYELFEMDAHIGAKELDLQY 420

Query: 421  MKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYA 480
            MKGEQPHCGFPERNFSLNVEKLARK       YRVLVIEQTETPEQLERRRKEKG     
Sbjct: 421  MKGEQPHCGFPERNFSLNVEKLARK------GYRVLVIEQTETPEQLERRRKEKG----- 480

Query: 481  YHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLM 540
                            +K+K         VVKREICAVVTKGTLTEGEMLSLNPDASYLM
Sbjct: 481  ----------------SKDK---------VVKREICAVVTKGTLTEGEMLSLNPDASYLM 540

Query: 541  AVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPA 600
            AVTE  HGLENQQAERILGVCVVDVATSR+ILGQFGDD ECSALCCLLSELRPVEIIKPA
Sbjct: 541  AVTEKFHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPA 600

Query: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASI 660
            KLLSPETERVLLTHTRNPLVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSS+EAS+
Sbjct: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASL 660

Query: 661  LNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720
            LN++ PGE DG S+LP VLSELV A ENGSWALSALGGILFYLKQAFLDETLLRFAKFEL
Sbjct: 661  LNDDTPGENDGLSFLPVVLSELVTAQENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720

Query: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780
            LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL
Sbjct: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780

Query: 781  ARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAK 840
            ARPLY VESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIF+NSEANGRNAK
Sbjct: 781  ARPLYDVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAK 840

Query: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLS 900
            NVVLYEDAAKKQLQEFISALRGCELMLQACSSL VIL +VESRRL+CLLTPGEGLPDL S
Sbjct: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHS 900

Query: 901  VLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSI 960
            VLSHFKDAFDWVEANSSGR+IPREGVD+EYDSACEKIKEIQSSLTKHLKEQR+LLGDTSI
Sbjct: 901  VLSHFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSI 960

Query: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAE 1020
            TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK           GFFRYWTPNIKKLL E
Sbjct: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK-----------GFFRYWTPNIKKLLVE 1020

Query: 1021 LFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGK 1080
            L LAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI                       
Sbjct: 1021 LSLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI----------------------- 1080

Query: 1081 LLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFV 1140
              AELDVLISLAIA DYYEG+TCQPLFSKSQCQ+EVPRFTAKNLGHPILRSD LGEGTFV
Sbjct: 1081 --AELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPRFTAKNLGHPILRSDSLGEGTFV 1140

Query: 1141 PNDITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVR 1200
            PNDIT+GGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQIGADVPAESFELAPVDRIFVR
Sbjct: 1141 PNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIGADVPAESFELAPVDRIFVR 1200

Query: 1201 MGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKT 1260
            MGAKDQIMSGQSTFLTELSETALML                                   
Sbjct: 1201 MGAKDQIMSGQSTFLTELSETALML----------------------------------- 1260

Query: 1261 AGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESV 1320
                                          SSATRNSLVILDELGRGTATSDGQAIAESV
Sbjct: 1261 ------------------------------SSATRNSLVILDELGRGTATSDGQAIAESV 1311

Query: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1380
            LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT
Sbjct: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1311

Query: 1381 CPKSYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYG 1440
            CPKSYG+                          +  L GLPNCVLTEAAAKSMEFEATYG
Sbjct: 1381 CPKSYGVN-------------------------VARLAGLPNCVLTEAAAKSMEFEATYG 1311

Query: 1441 MAGEESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1494
            MAGEESEDNLCNHAWVDDT+TLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ
Sbjct: 1441 MAGEESEDNLCNHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1311

[Close]

BLAST of Lsi02G024720 vs. ExPASy TrEMBL
Match: A0A5A7TZD1 (DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold427G00600 PE=3 SV=1)

HSP 1 Score: 2255.7 bits (5844), Expect = 0.0e+00
Identity = 1219/1500 (81.27%), Postives = 1258/1500 (83.87%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAA THSIS+ TPSPSP+INSPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAARTHSISTLTPSPSPNINSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSS---SSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGR 120
            KRKKPLLVIG GA P SSS   S GPS L   +EKSHGDGV+GKKIKVYWPLDKTWYEGR
Sbjct: 61   KRKKPLLVIGGGAGPFSSSPSPSPGPSSLPDKEEKSHGDGVIGKKIKVYWPLDKTWYEGR 120

Query: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDME 180
            VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSS+PV+AA VEDM+
Sbjct: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSSPVTAAVVEDMD 180

Query: 181  DFN---DGDGSDDSKDEDWGKNVENEVSEEEDVELVE--EDEDGSEEDGVGKSRRKQGGK 240
            D N   DGDGSDDS+DEDW KNVENEVSEEEDV+LVE  EDEDGSEED VGKSRRKQGG+
Sbjct: 181  DINDLSDGDGSDDSRDEDWEKNVENEVSEEEDVDLVEEDEDEDGSEEDAVGKSRRKQGGQ 240

Query: 241  VESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDA 300
            VESKKRKMSNG+KVE APKK KSSGGSVTSGG + SSME+KIKSE ASVL GINEIASDA
Sbjct: 241  VESKKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQFSSMETKIKSESASVLKGINEIASDA 300

Query: 301  LERFNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSK 360
            LERFNSREAEKFRFLKEDRKDANKR PGDPDYDP+TLYLPPYF+KNLSDGQRQWWEFKSK
Sbjct: 301  LERFNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLYLPPYFVKNLSDGQRQWWEFKSK 360

Query: 361  HMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQY 420
            HMDKVLFFK                            MGKFYELFEMDAH+GAKELDLQY
Sbjct: 361  HMDKVLFFK----------------------------MGKFYELFEMDAHIGAKELDLQY 420

Query: 421  MKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYA 480
            MKGEQPHCGFPERNFSLNVEKLARK       YRVLVIEQTETPEQLERRRKEKG     
Sbjct: 421  MKGEQPHCGFPERNFSLNVEKLARK------GYRVLVIEQTETPEQLERRRKEKG----- 480

Query: 481  YHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLM 540
                              +K+ AL       KREICAVVTKGTLTEGEMLSLNPDASYLM
Sbjct: 481  ------------------SKDKAL-------KREICAVVTKGTLTEGEMLSLNPDASYLM 540

Query: 541  AVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPA 600
            AVTE  HGLENQQAERILGVCVVDVATSR+ILGQFGDD ECSALCCLLSELRPVEIIKPA
Sbjct: 541  AVTEKFHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPA 600

Query: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASI 660
            KLLSPETERVLLTHTRNPLVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSS+EAS+
Sbjct: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASL 660

Query: 661  LNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720
            LN++ PGE DG S+LP VLSELV AHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL
Sbjct: 661  LNDDTPGENDGLSFLPVVLSELVTAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720

Query: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780
            LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL
Sbjct: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780

Query: 781  ARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAK 840
            ARPLY VESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIF+NSEANGRNAK
Sbjct: 781  ARPLYDVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAK 840

Query: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLS 900
            NVVLYEDAAKKQLQEFISALRGCELMLQACSSL VIL +VESRRL+CLLTPGEGLPDL S
Sbjct: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHS 900

Query: 901  VLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSI 960
            VLSHFKDAFDWVEANSSGR+IPREGVD+EYDSACEKIKEIQSSLTKHLKEQR+LLGDTSI
Sbjct: 901  VLSHFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSI 960

Query: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAE 1020
            TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK           GFFRYWTPNIKKLL E
Sbjct: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK-----------GFFRYWTPNIKKLLVE 1020

Query: 1021 LFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGK 1080
            L LAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI                       
Sbjct: 1021 LSLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI----------------------- 1080

Query: 1081 LLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFV 1140
              AELDVLISLAIA DYYEG+TCQPLFSKSQCQ+EVP FTAKNLGHPILRSD LGEGTFV
Sbjct: 1081 --AELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPHFTAKNLGHPILRSDSLGEGTFV 1140

Query: 1141 PNDITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVR 1200
            PNDIT+GGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQIGADVPAESFELAPVDRIFVR
Sbjct: 1141 PNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIGADVPAESFELAPVDRIFVR 1200

Query: 1201 MGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKT 1260
            MGAKDQIMSGQSTFLTELSETALML                                   
Sbjct: 1201 MGAKDQIMSGQSTFLTELSETALML----------------------------------- 1260

Query: 1261 AGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESV 1320
                                          SSATRNSLVILDELGRGTATSDGQAIAESV
Sbjct: 1261 ------------------------------SSATRNSLVILDELGRGTATSDGQAIAESV 1310

Query: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1380
            LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT
Sbjct: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1310

Query: 1381 CPKSYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYG 1440
            CPKSYG+                          +  L GLPNCVLTEAAAKSMEFEATYG
Sbjct: 1381 CPKSYGVN-------------------------VARLAGLPNCVLTEAAAKSMEFEATYG 1310

Query: 1441 MAGEESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1493
            MAGEESEDNLCNHAWVDDT+TLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ
Sbjct: 1441 MAGEESEDNLCNHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1310

[Close]

BLAST of Lsi02G024720 vs. ExPASy TrEMBL
Match: A0A0A0KB78 (DNA mismatch repair protein OS=Cucumis sativus OX=3659 GN=Csa_7G407640 PE=3 SV=1)

HSP 1 Score: 2248.0 bits (5824), Expect = 0.0e+00
Identity = 1215/1498 (81.11%), Postives = 1258/1498 (83.98%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAA THSISSPTPSPSP+INSPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAARTHSISSPTPSPSPNINSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSSSSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKM 120
            KRKKPLLVIG GA P SSSS G S L  A+EKSHGDGV+GKKIKVYWPLDKTWYEGRVKM
Sbjct: 61   KRKKPLLVIGGGAPPFSSSSPGSSSLPDAEEKSHGDGVIGKKIKVYWPLDKTWYEGRVKM 120

Query: 121  FDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDMEDFN 180
            FDEKAGKHLVQYDDAEEE+LVLGNEKIEWVEESAKKFKRLRRGSS PVSAA +EDM+D N
Sbjct: 121  FDEKAGKHLVQYDDAEEELLVLGNEKIEWVEESAKKFKRLRRGSSPPVSAAVLEDMDDLN 180

Query: 181  ---DGDGSDDSKDEDWGKNVENEVSEEEDVELVE--EDEDGSEEDGVGKSRRKQGGKVES 240
               DGDGSDDS+DEDWGKNVENEVSEEEDV+LVE  EDEDGSEEDGVGKSRRKQGG+VES
Sbjct: 181  DLSDGDGSDDSRDEDWGKNVENEVSEEEDVDLVEENEDEDGSEEDGVGKSRRKQGGQVES 240

Query: 241  KKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDALER 300
            KKRKMSNG+KVE APKK KSSGGSVTSGG +LSSME+KIKSE  SVL GINEIASDALER
Sbjct: 241  KKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQLSSMETKIKSESTSVLKGINEIASDALER 300

Query: 301  FNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMD 360
            FNSREAEKFRFLKEDRKDANKR PGDPDYDP+TL+LPPYF+KNLSDGQRQWWEFKSKHMD
Sbjct: 301  FNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLHLPPYFVKNLSDGQRQWWEFKSKHMD 360

Query: 361  KVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKG 420
            KVLFFK                            MGKFYELFEMDAH+GAKELDLQYMKG
Sbjct: 361  KVLFFK----------------------------MGKFYELFEMDAHIGAKELDLQYMKG 420

Query: 421  EQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHK 480
            +QPHCGFPERNFSLNVEKLARK       YRVLVIEQTETPEQLERRRKEKG        
Sbjct: 421  DQPHCGFPERNFSLNVEKLARK------GYRVLVIEQTETPEQLERRRKEKG-------- 480

Query: 481  LPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVT 540
                         +K+K         VVKREICAVVTKGTLTEGEMLSLNPDASYLMAVT
Sbjct: 481  -------------SKDK---------VVKREICAVVTKGTLTEGEMLSLNPDASYLMAVT 540

Query: 541  ENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLL 600
            EN +GLENQQ ERILGVCVVDVATSR+ILGQFGDDSECSALCCLLSELRPVEIIKPAKLL
Sbjct: 541  ENFYGLENQQ-ERILGVCVVDVATSRVILGQFGDDSECSALCCLLSELRPVEIIKPAKLL 600

Query: 601  SPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNE 660
            SPETERVLLTHTRNPLVNELVPLLEFWDAEK+VQEVKRLFKGIANRSVSGSS+EAS+LN+
Sbjct: 601  SPETERVLLTHTRNPLVNELVPLLEFWDAEKTVQEVKRLFKGIANRSVSGSSSEASLLND 660

Query: 661  NAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPC 720
            NA  E DG SY+P+VLSELV A ENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPC
Sbjct: 661  NAARENDGLSYMPDVLSELVTADENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPC 720

Query: 721  SGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARP 780
            SGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARP
Sbjct: 721  SGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARP 780

Query: 781  LYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVV 840
            LYHVESI+ARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIF+NSEANGRNA NVV
Sbjct: 781  LYHVESIEARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAINVV 840

Query: 841  LYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLS 900
            LYEDAAKKQLQEFISALRGCELMLQACSSLRVIL NV+SRRLDCLLTPGEGLPDL SVLS
Sbjct: 841  LYEDAAKKQLQEFISALRGCELMLQACSSLRVILPNVKSRRLDCLLTPGEGLPDLHSVLS 900

Query: 901  HFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYV 960
            HFKDAFDWVEANSSGR+IPREGVD+EYDSACEKI+EIQSSLTKHLKEQR+LLGDTSITYV
Sbjct: 901  HFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIREIQSSLTKHLKEQRKLLGDTSITYV 960

Query: 961  TVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAELFL 1020
            TVGKETHLLEVPESLQGNIPQTYELRSSKK           GFFRYWTPNIKKLLAEL L
Sbjct: 961  TVGKETHLLEVPESLQGNIPQTYELRSSKK-----------GFFRYWTPNIKKLLAELSL 1020

Query: 1021 AESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLA 1080
            AESEKESSLKSILQRLI KFCEHHLQWRQLVSAI                         A
Sbjct: 1021 AESEKESSLKSILQRLIRKFCEHHLQWRQLVSAI-------------------------A 1080

Query: 1081 ELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPND 1140
            ELDVLISLAIA DYYEG+TCQPLFSKSQCQNEVPRFTAKNLGHPILRSD LGEGTFVPND
Sbjct: 1081 ELDVLISLAIASDYYEGYTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDSLGEGTFVPND 1140

Query: 1141 ITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGA 1200
            IT+GGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGA
Sbjct: 1141 ITIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGA 1200

Query: 1201 KDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGP 1260
            +DQIMSGQSTFLTELSETALML                                      
Sbjct: 1201 RDQIMSGQSTFLTELSETALML-------------------------------------- 1260

Query: 1261 FHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEH 1320
                                       SSATRNS+VILDELGRGTATSDGQAIAESVLEH
Sbjct: 1261 ---------------------------SSATRNSVVILDELGRGTATSDGQAIAESVLEH 1307

Query: 1321 FVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPK 1380
            FVSKVQCRGVFSTHYHRLALAY+KDPRVSL+HMACRVGEGNNGLEEVTFLYRLTPGTCPK
Sbjct: 1321 FVSKVQCRGVFSTHYHRLALAYHKDPRVSLHHMACRVGEGNNGLEEVTFLYRLTPGTCPK 1307

Query: 1381 SYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYGMAG 1440
            SYG+                          +  L GLPNCVLTEAAAKSMEFE TYGMAG
Sbjct: 1381 SYGVN-------------------------VARLAGLPNCVLTEAAAKSMEFEVTYGMAG 1307

Query: 1441 EESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQG 1494
            EESE +LCN  WVDDT TLIQKLISLES VRCNDETEKNGIGSLKQLQQQARILVQQG
Sbjct: 1441 EESEVDLCNQTWVDDTTTLIQKLISLESAVRCNDETEKNGIGSLKQLQQQARILVQQG 1307

[Close]

BLAST of Lsi02G024720 vs. ExPASy TrEMBL
Match: A0A5D3D2Q9 (DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001670 PE=3 SV=1)

HSP 1 Score: 2220.3 bits (5752), Expect = 0.0e+00
Identity = 1203/1509 (79.72%), Postives = 1242/1509 (82.31%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAA THSIS+ TPSPSP+INSPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAARTHSISTLTPSPSPNINSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSS---SSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGR 120
            KRKKPLLVIG GA P SSS   S GPS L   +EKSHGDGV+GKKIKVYWPLDKTWYEGR
Sbjct: 61   KRKKPLLVIGGGAGPFSSSPSPSPGPSSLPDKEEKSHGDGVIGKKIKVYWPLDKTWYEGR 120

Query: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDME 180
            VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSS+PV+AA VEDM+
Sbjct: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSSPVTAAVVEDMD 180

Query: 181  DFN---DGDGSDDSKDEDWGKNVENEVSEEEDVELVE--EDEDGSEEDGVGKSRRKQGGK 240
            D N   DGDGSDDS+DEDW KNVENEVSEEEDV+LVE  EDEDGSEED VGKSRRKQGG+
Sbjct: 181  DINDLSDGDGSDDSRDEDWEKNVENEVSEEEDVDLVEEDEDEDGSEEDAVGKSRRKQGGQ 240

Query: 241  VESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDA 300
            VESKKRKMSNG+KVE APKK KSSGGSVTSGG + SSME+KIKSE ASVL GINEIASDA
Sbjct: 241  VESKKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQFSSMETKIKSESASVLKGINEIASDA 300

Query: 301  LERFNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSK 360
            LERFNSREAEKFRFLKEDRKDANKR PGDPDYDP+TLYLPPYF+KNLSDGQRQWWEFKSK
Sbjct: 301  LERFNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLYLPPYFVKNLSDGQRQWWEFKSK 360

Query: 361  HMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQY 420
            HMDKVLFFK                            MGKFYELFEMDAH+GAKELDLQY
Sbjct: 361  HMDKVLFFK----------------------------MGKFYELFEMDAHIGAKELDLQY 420

Query: 421  MKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYA 480
            MKGEQPHCGFPERNFSLNVEKLARK                                   
Sbjct: 421  MKGEQPHCGFPERNFSLNVEKLARK----------------------------------- 480

Query: 481  YHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLM 540
                                         VVKREICAVVTKGTLTEGEMLSLNPDASYLM
Sbjct: 481  -----------------------------VVKREICAVVTKGTLTEGEMLSLNPDASYLM 540

Query: 541  AVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPA 600
            AVTE  HGLENQQAERILGVCVVDVATSR+ILGQFGDD ECSALCCLLSELRPVEIIKPA
Sbjct: 541  AVTEKFHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPA 600

Query: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASI 660
            KLLSPETERVLLTHTRNPLVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSS+EAS+
Sbjct: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASL 660

Query: 661  LNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720
            LN++ PGE DG S+LP VLSELV AHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL
Sbjct: 661  LNDDTPGENDGLSFLPVVLSELVTAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720

Query: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780
            LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL
Sbjct: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780

Query: 781  ARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAK 840
            ARPLY VESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIF+NSEANGRNAK
Sbjct: 781  ARPLYDVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAK 840

Query: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLS 900
            NVVLYEDAAKKQLQEFISALRGCELMLQACSSL VIL +VESRRL+CLLTPGEGLPDL S
Sbjct: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHS 900

Query: 901  VLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSI 960
            VLSHFKDAFDWVEANSSGR+IPREGVD+EYDSACEKIKEIQSSLTKHLKEQR+LLGDTSI
Sbjct: 901  VLSHFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSI 960

Query: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAE 1020
            TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK           GFFRYWTPNIKKLL E
Sbjct: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK-----------GFFRYWTPNIKKLLVE 1020

Query: 1021 LFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGK 1080
            L LAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI                       
Sbjct: 1021 LSLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI----------------------- 1080

Query: 1081 LLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFV 1140
              AELDVLISLAIA DYYEG+TCQPLFSKSQCQ+EVP FTAKNLGHPILRSD LGEGTFV
Sbjct: 1081 --AELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPHFTAKNLGHPILRSDSLGEGTFV 1140

Query: 1141 PNDITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVR 1200
            PNDIT+GGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQIGADVPAESFELAPVDRIFVR
Sbjct: 1141 PNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIGADVPAESFELAPVDRIFVR 1200

Query: 1201 MGAKDQIMSGQSTFLTELSETALMLL--LCSFKRFK-------LCCPPLRGLSWLNFLVK 1260
            MGAKDQIMSGQSTFLTELSETALML+   C   +F          C PL  LSW      
Sbjct: 1201 MGAKDQIMSGQSTFLTELSETALMLVGYCCITDQFSYFAASSDFSCVPLGDLSW------ 1260

Query: 1261 GLLPHVAKTAGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATS 1320
                                                   SSATRNSLVILDELGRGTATS
Sbjct: 1261 ---------------------------------------SSATRNSLVILDELGRGTATS 1311

Query: 1321 DGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVT 1380
            DGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVT
Sbjct: 1321 DGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVT 1311

Query: 1381 FLYRLTPGTCPKSYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAK 1440
            FLYRLTPGTCPKSYG+                          +  L GLPNCVLTEAAAK
Sbjct: 1381 FLYRLTPGTCPKSYGVN-------------------------VARLAGLPNCVLTEAAAK 1311

Query: 1441 SMEFEATYGMAGEESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQ 1493
            SMEFEATYGMAGEESEDNLCNHAWVDDT+TLIQKLISLESTVRCNDETEKNGIGSLKQLQ
Sbjct: 1441 SMEFEATYGMAGEESEDNLCNHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQ 1311

[Close]

BLAST of Lsi02G024720 vs. ExPASy TrEMBL
Match: A0A6J1H7N2 (DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111461234 PE=3 SV=1)

HSP 1 Score: 2134.8 bits (5530), Expect = 0.0e+00
Identity = 1159/1501 (77.22%), Postives = 1222/1501 (81.41%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANT----HSISSPTPSPSPSINSPP 60
            MSSSRR+SNGRSPLVNQQRQITSFFTKK TG+NS   T    H   SPT +PSPS NSP 
Sbjct: 1    MSSSRRTSNGRSPLVNQQRQITSFFTKKSTGENSTDKTNRDSHFNLSPTSNPSPSTNSPS 60

Query: 61   SVQSKRKKPLLVIGAGAAPSSSSSSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEG 120
            SVQSKRKK  LVIG G   ++SSS GPSP+A  KEKS+GDGVVGK+IKVYWPLDK+WYEG
Sbjct: 61   SVQSKRKKTPLVIGGGGGGAASSSPGPSPIAHVKEKSYGDGVVGKRIKVYWPLDKSWYEG 120

Query: 121  RVKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDM 180
            RVKMFDEK GKHLVQYDDAEEE LVLGNEKIEWVEES KK KRLRRGSS+P++AA VED+
Sbjct: 121  RVKMFDEKDGKHLVQYDDAEEESLVLGNEKIEWVEESEKKLKRLRRGSSSPMNAAVVEDI 180

Query: 181  -EDFNDGDGSDDSKDEDW--GKNVENEVSEEEDVELVEED-EDGSEEDGVGKSRRKQGGK 240
             ED NDGD SDDS+DEDW  GKNVENEVS+E+D+ LVEED ED +E+DGVGKSRRKQGG 
Sbjct: 181  EEDLNDGDASDDSRDEDWGKGKNVENEVSDEDDLGLVEEDEEDENEDDGVGKSRRKQGGN 240

Query: 241  VESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDA 300
            +ESKKRK+SNGEKV  APKKSKSSGG++ SG   LSS+E KIKS+R +VLNG+NEIA+DA
Sbjct: 241  LESKKRKISNGEKVVGAPKKSKSSGGNLPSG---LSSVEPKIKSDRVNVLNGMNEIANDA 300

Query: 301  LERFNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSK 360
            LERFN+REAEKFRFLK DRKDANKR PGDPDYDPRTLYLPP+FLKNLSDGQRQWWEFKSK
Sbjct: 301  LERFNTREAEKFRFLKADRKDANKRHPGDPDYDPRTLYLPPHFLKNLSDGQRQWWEFKSK 360

Query: 361  HMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQY 420
            HMDKVLFFK                            MGKFYELFEMDAHVGAKELDLQY
Sbjct: 361  HMDKVLFFK----------------------------MGKFYELFEMDAHVGAKELDLQY 420

Query: 421  MKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYA 480
            MKGEQPHCGFPE+NFS+NVEKLARK       YRVLVIEQTETPEQLE+RRKEKG     
Sbjct: 421  MKGEQPHCGFPEKNFSMNVEKLARK------GYRVLVIEQTETPEQLEKRRKEKG----- 480

Query: 481  YHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLM 540
                            +K+K         VVKREICAVVTKGTLTEGEMLSLNPDASYLM
Sbjct: 481  ----------------SKDK---------VVKREICAVVTKGTLTEGEMLSLNPDASYLM 540

Query: 541  AVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPA 600
            AVTE  HGLENQ AERILGVCVVDVATSRIILGQFGDD+ECSALCCLLSELRPVEIIKP+
Sbjct: 541  AVTEKFHGLENQPAERILGVCVVDVATSRIILGQFGDDAECSALCCLLSELRPVEIIKPS 600

Query: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASI 660
            KLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSV EVKRLFKGIANRS  GSSNE S+
Sbjct: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVHEVKRLFKGIANRSFLGSSNEESL 660

Query: 661  LNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720
            LN++ PGEKDG  YLP+VLSEL+NA ENGSWALSALGGILFYLKQAFLDE LLRFAKFEL
Sbjct: 661  LNDDVPGEKDGLGYLPDVLSELINARENGSWALSALGGILFYLKQAFLDEALLRFAKFEL 720

Query: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780
            LPCSGF+DVISKPYMVLDAAALENLEIFENSRNG SSGTLYSQLNHCVTAFGKRLLKTWL
Sbjct: 721  LPCSGFNDVISKPYMVLDAAALENLEIFENSRNGGSSGTLYSQLNHCVTAFGKRLLKTWL 780

Query: 781  ARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAK 840
            ARPLYHVESIKARQGAVASLRGDNLS+SLEFRKALSKL DMERLLARIFA+SEANGRNA 
Sbjct: 781  ARPLYHVESIKARQGAVASLRGDNLSYSLEFRKALSKLTDMERLLARIFASSEANGRNAT 840

Query: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLS 900
            NVVLYEDAAK+QLQEFISALRGCELMLQACSSLRVIL NVESRRLDCLLTPGEGLPDL S
Sbjct: 841  NVVLYEDAAKRQLQEFISALRGCELMLQACSSLRVILENVESRRLDCLLTPGEGLPDLQS 900

Query: 901  VLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSI 960
            VLSHFKDAFDW EANSSGRIIP EGVD+EYDSAC+KIKEIQS LTKHLKEQR+LLGDTSI
Sbjct: 901  VLSHFKDAFDWGEANSSGRIIPHEGVDVEYDSACKKIKEIQSDLTKHLKEQRKLLGDTSI 960

Query: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAE 1020
            TYVTVGKETHLLEVPESLQG+IPQ YELRSSKK           GFFRYWTPNIKKLLAE
Sbjct: 961  TYVTVGKETHLLEVPESLQGSIPQNYELRSSKK-----------GFFRYWTPNIKKLLAE 1020

Query: 1021 LFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGK 1080
            L LAESEKESSLKSILQRLIGKFCEHHLQWRQLVSA+                       
Sbjct: 1021 LSLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAV----------------------- 1080

Query: 1081 LLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFV 1140
              AELDVLISLAIA DYYEG  CQPLFSKSQCQ EVPRF+AKNLGHPIL+SD LGEGTFV
Sbjct: 1081 --AELDVLISLAIASDYYEGGACQPLFSKSQCQKEVPRFSAKNLGHPILKSDSLGEGTFV 1140

Query: 1141 PNDITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVR 1200
            PNDI +GGS A+FILLTGPNMGGKSTLLRQVCLSV+LAQIGADVPAESFELAPVDRIFVR
Sbjct: 1141 PNDINIGGSSASFILLTGPNMGGKSTLLRQVCLSVVLAQIGADVPAESFELAPVDRIFVR 1200

Query: 1201 MGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKT 1260
            MGAKDQIMSGQSTFLTELSETALML                                   
Sbjct: 1201 MGAKDQIMSGQSTFLTELSETALML----------------------------------- 1260

Query: 1261 AGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESV 1320
                                          SSATRNSLVILDELGRGTATSDGQAIAESV
Sbjct: 1261 ------------------------------SSATRNSLVILDELGRGTATSDGQAIAESV 1308

Query: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1380
            LEHFVSKVQCRGVFSTHYHRLALAY KDPRVSLYHMACRVGEG  G+EEVTFLYRLT GT
Sbjct: 1321 LEHFVSKVQCRGVFSTHYHRLALAYCKDPRVSLYHMACRVGEGTGGVEEVTFLYRLTSGT 1308

Query: 1381 CPKSYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYG 1440
            CPKSYG+                          +  L GLPNCVLTEAAAKS EFEATYG
Sbjct: 1381 CPKSYGVN-------------------------VARLAGLPNCVLTEAAAKSREFEATYG 1308

Query: 1441 MAGEESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1494
            + GEESE+NLCNH+WVD TVTLIQKLISLEST+RCNDETEKNGI SLKQLQQQARILVQQ
Sbjct: 1441 ITGEESEENLCNHSWVDGTVTLIQKLISLESTLRCNDETEKNGISSLKQLQQQARILVQQ 1308

[Close]

BLAST of Lsi02G024720 vs. NCBI nr
Match: XP_038899670.1 (DNA mismatch repair protein MSH6 isoform X2 [Benincasa hispida])

HSP 1 Score: 2314.3 bits (5996), Expect = 0.0e+00
Identity = 1242/1493 (83.19%), Postives = 1274/1493 (85.33%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKP GDNSAA THSISS  PSPSP+I+SPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPAGDNSAAKTHSISSLNPSPSPNIDSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSSSSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKM 120
            KRKKPLLVIG GAAP SSSSSGPSP+AA KEKSHGDGVVGKKIKVYWPLDKTWYEGRVKM
Sbjct: 61   KRKKPLLVIGGGAAP-SSSSSGPSPIAAVKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKM 120

Query: 121  FDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDMEDFN 180
            FDEKAGKHLVQYDDAEEEMLVL NEKIEW+EESAKKFKRLRRGSS+PVSAA VEDMEDFN
Sbjct: 121  FDEKAGKHLVQYDDAEEEMLVLRNEKIEWIEESAKKFKRLRRGSSSPVSAAVVEDMEDFN 180

Query: 181  DGDGSDDSKDEDWGKNVENEVSEEEDVELVEEDEDGSEEDGVGKSRRKQGGKVESKKRKM 240
            DGD SDDS+DEDWGKNV+ EVSEEEDVELVEEDEDGSEEDGVGKSRRK GGKVESKKRK+
Sbjct: 181  DGDDSDDSRDEDWGKNVDKEVSEEEDVELVEEDEDGSEEDGVGKSRRKPGGKVESKKRKI 240

Query: 241  SNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDALERFNSRE 300
            SNGEKV SAPKKSKSSGGSVTSGGF+LSSME+KIKSERA+VLNG+NEI+SDALERFN RE
Sbjct: 241  SNGEKVGSAPKKSKSSGGSVTSGGFQLSSMETKIKSERANVLNGMNEISSDALERFNLRE 300

Query: 301  AEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMDKVLFF 360
            AEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPP+FLKNLSDGQRQWWEFKSKHMDKVLFF
Sbjct: 301  AEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPHFLKNLSDGQRQWWEFKSKHMDKVLFF 360

Query: 361  KVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKGEQPHC 420
            K                            MGKFYELFEMDAHVGAKELDLQYMKGEQPHC
Sbjct: 361  K----------------------------MGKFYELFEMDAHVGAKELDLQYMKGEQPHC 420

Query: 421  GFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHKLPHVF 480
            GFPERNFSLNVEKLARK       YRVLVIEQTETPEQLERRRKEKG             
Sbjct: 421  GFPERNFSLNVEKLARK------GYRVLVIEQTETPEQLERRRKEKG------------- 480

Query: 481  NLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSHG 540
                    +K+K         VVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSHG
Sbjct: 481  --------SKDK---------VVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSHG 540

Query: 541  LENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETE 600
            LENQQAERILGVCVVD ATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETE
Sbjct: 541  LENQQAERILGVCVVDAATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETE 600

Query: 601  RVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNENAPGE 660
            RVLLTHTRNPLVNELVPLLEFWDAE+SVQEV+RLFKGIANRSVSGSS+EAS+LN++APGE
Sbjct: 601  RVLLTHTRNPLVNELVPLLEFWDAERSVQEVERLFKGIANRSVSGSSSEASLLNDDAPGE 660

Query: 661  KDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSGFSD 720
            KDG SYLP+VLSELVNAHENGSWALSALGGILFYLKQAFLDETLL+FAKFELLPCSGFSD
Sbjct: 661  KDGLSYLPDVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLKFAKFELLPCSGFSD 720

Query: 721  VISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVE 780
            VISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVE
Sbjct: 721  VISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVE 780

Query: 781  SIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVVLYEDA 840
            SIKARQGAVASLRGDNLSFSLEFRKAL+KLPDMERLLARIFANSEANGRNAKNVVLYEDA
Sbjct: 781  SIKARQGAVASLRGDNLSFSLEFRKALAKLPDMERLLARIFANSEANGRNAKNVVLYEDA 840

Query: 841  AKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLSHFKDA 900
            AKKQLQEFISALRGCELMLQACSSLRVILSNVESRR DCLLTPGEGLPDLLSVLSHFKDA
Sbjct: 841  AKKQLQEFISALRGCELMLQACSSLRVILSNVESRRFDCLLTPGEGLPDLLSVLSHFKDA 900

Query: 901  FDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKE 960
            FDWVEANSSGRIIPREGVDMEYDSACEKIKEIQ+SLTKHLKEQRRLLGDTSITYVTVGKE
Sbjct: 901  FDWVEANSSGRIIPREGVDMEYDSACEKIKEIQASLTKHLKEQRRLLGDTSITYVTVGKE 960

Query: 961  THLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAELFLAESEK 1020
            THLLEVPESLQGN+PQTYELRSSKK           GFFRYWTPNIKKLLAEL LAESEK
Sbjct: 961  THLLEVPESLQGNVPQTYELRSSKK-----------GFFRYWTPNIKKLLAELSLAESEK 1020

Query: 1021 ESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDVL 1080
            ESSLKSILQRLIGKFCEHHLQWRQLVSAI                         AELDVL
Sbjct: 1021 ESSLKSILQRLIGKFCEHHLQWRQLVSAI-------------------------AELDVL 1080

Query: 1081 ISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPNDITLGG 1140
            ISLAIA DYYEGHTCQPLFSKSQCQNEVPRF AKNLGHPILRSD LGEGTFVPNDITLGG
Sbjct: 1081 ISLAIASDYYEGHTCQPLFSKSQCQNEVPRFNAKNLGHPILRSDSLGEGTFVPNDITLGG 1140

Query: 1141 SGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIM 1200
             GANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIM
Sbjct: 1141 LGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIM 1200

Query: 1201 SGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDTF 1260
            SGQSTFLTELSETALML                                           
Sbjct: 1201 SGQSTFLTELSETALML------------------------------------------- 1260

Query: 1261 FSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKV 1320
                                  SSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKV
Sbjct: 1261 ----------------------SSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKV 1302

Query: 1321 QCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYGLT 1380
            QCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYG+ 
Sbjct: 1321 QCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYGVN 1302

Query: 1381 RNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYGMAGEESED 1440
                                     +  L GLPNCVLTEAAAKSMEFEATYGM  EESED
Sbjct: 1381 -------------------------VARLAGLPNCVLTEAAAKSMEFEATYGMVREESED 1302

Query: 1441 NLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQG 1494
            NLCNHAWVDDTVTLIQKLISLEST+RCNDETEKNGIGSL+QLQQ+ARILVQQG
Sbjct: 1441 NLCNHAWVDDTVTLIQKLISLESTMRCNDETEKNGIGSLEQLQQEARILVQQG 1302

[Close]

BLAST of Lsi02G024720 vs. NCBI nr
Match: XP_038899669.1 (DNA mismatch repair protein MSH6 isoform X1 [Benincasa hispida])

HSP 1 Score: 2308.5 bits (5981), Expect = 0.0e+00
Identity = 1241/1494 (83.07%), Postives = 1274/1494 (85.27%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKP GDNSAA THSISS  PSPSP+I+SPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPAGDNSAAKTHSISSLNPSPSPNIDSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSSSSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKM 120
            KRKKPLLVIG GAAP SSSSSGPSP+AA KEKSHGDGVVGKKIKVYWPLDKTWYEGRVKM
Sbjct: 61   KRKKPLLVIGGGAAP-SSSSSGPSPIAAVKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKM 120

Query: 121  FDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDMEDFN 180
            FDEKAGKHLVQYDDAEEEMLVL NEKIEW+EESAKKFKRLRRGSS+PVSAA VEDMEDFN
Sbjct: 121  FDEKAGKHLVQYDDAEEEMLVLRNEKIEWIEESAKKFKRLRRGSSSPVSAAVVEDMEDFN 180

Query: 181  DGDGSDDSKDEDWGKNVENEVSEEEDVELVEEDEDGSEEDGVGKSRRKQGGKVESKKRKM 240
            DGD SDDS+DEDWGKNV+ EVSEEEDVELVEEDEDGSEEDGVGKSRRK GGKVESKKRK+
Sbjct: 181  DGDDSDDSRDEDWGKNVDKEVSEEEDVELVEEDEDGSEEDGVGKSRRKPGGKVESKKRKI 240

Query: 241  SNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDALERFNSRE 300
            SNGEKV SAPKKSKSSGGSVTSGGF+LSSME+KIKSERA+VLNG+NEI+SDALERFN RE
Sbjct: 241  SNGEKVGSAPKKSKSSGGSVTSGGFQLSSMETKIKSERANVLNGMNEISSDALERFNLRE 300

Query: 301  AEKFRFLKE-DRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMDKVLF 360
            AEKFRFLK+ DRKDANKRRPGDPDYDPRTLYLPP+FLKNLSDGQRQWWEFKSKHMDKVLF
Sbjct: 301  AEKFRFLKDRDRKDANKRRPGDPDYDPRTLYLPPHFLKNLSDGQRQWWEFKSKHMDKVLF 360

Query: 361  FKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKGEQPH 420
            FK                            MGKFYELFEMDAHVGAKELDLQYMKGEQPH
Sbjct: 361  FK----------------------------MGKFYELFEMDAHVGAKELDLQYMKGEQPH 420

Query: 421  CGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHKLPHV 480
            CGFPERNFSLNVEKLARK       YRVLVIEQTETPEQLERRRKEKG            
Sbjct: 421  CGFPERNFSLNVEKLARK------GYRVLVIEQTETPEQLERRRKEKG------------ 480

Query: 481  FNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSH 540
                     +K+K         VVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSH
Sbjct: 481  ---------SKDK---------VVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSH 540

Query: 541  GLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPET 600
            GLENQQAERILGVCVVD ATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPET
Sbjct: 541  GLENQQAERILGVCVVDAATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPET 600

Query: 601  ERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNENAPG 660
            ERVLLTHTRNPLVNELVPLLEFWDAE+SVQEV+RLFKGIANRSVSGSS+EAS+LN++APG
Sbjct: 601  ERVLLTHTRNPLVNELVPLLEFWDAERSVQEVERLFKGIANRSVSGSSSEASLLNDDAPG 660

Query: 661  EKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSGFS 720
            EKDG SYLP+VLSELVNAHENGSWALSALGGILFYLKQAFLDETLL+FAKFELLPCSGFS
Sbjct: 661  EKDGLSYLPDVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLKFAKFELLPCSGFS 720

Query: 721  DVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHV 780
            DVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHV
Sbjct: 721  DVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHV 780

Query: 781  ESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVVLYED 840
            ESIKARQGAVASLRGDNLSFSLEFRKAL+KLPDMERLLARIFANSEANGRNAKNVVLYED
Sbjct: 781  ESIKARQGAVASLRGDNLSFSLEFRKALAKLPDMERLLARIFANSEANGRNAKNVVLYED 840

Query: 841  AAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLSHFKD 900
            AAKKQLQEFISALRGCELMLQACSSLRVILSNVESRR DCLLTPGEGLPDLLSVLSHFKD
Sbjct: 841  AAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRFDCLLTPGEGLPDLLSVLSHFKD 900

Query: 901  AFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGK 960
            AFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQ+SLTKHLKEQRRLLGDTSITYVTVGK
Sbjct: 901  AFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQASLTKHLKEQRRLLGDTSITYVTVGK 960

Query: 961  ETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAELFLAESE 1020
            ETHLLEVPESLQGN+PQTYELRSSKK           GFFRYWTPNIKKLLAEL LAESE
Sbjct: 961  ETHLLEVPESLQGNVPQTYELRSSKK-----------GFFRYWTPNIKKLLAELSLAESE 1020

Query: 1021 KESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDV 1080
            KESSLKSILQRLIGKFCEHHLQWRQLVSAI                         AELDV
Sbjct: 1021 KESSLKSILQRLIGKFCEHHLQWRQLVSAI-------------------------AELDV 1080

Query: 1081 LISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPNDITLG 1140
            LISLAIA DYYEGHTCQPLFSKSQCQNEVPRF AKNLGHPILRSD LGEGTFVPNDITLG
Sbjct: 1081 LISLAIASDYYEGHTCQPLFSKSQCQNEVPRFNAKNLGHPILRSDSLGEGTFVPNDITLG 1140

Query: 1141 GSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQI 1200
            G GANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQI
Sbjct: 1141 GLGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQI 1200

Query: 1201 MSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDT 1260
            MSGQSTFLTELSETALML                                          
Sbjct: 1201 MSGQSTFLTELSETALML------------------------------------------ 1260

Query: 1261 FFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSK 1320
                                   SSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSK
Sbjct: 1261 -----------------------SSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSK 1303

Query: 1321 VQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYGL 1380
            VQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYG+
Sbjct: 1321 VQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYGV 1303

Query: 1381 TRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYGMAGEESE 1440
                                      +  L GLPNCVLTEAAAKSMEFEATYGM  EESE
Sbjct: 1381 N-------------------------VARLAGLPNCVLTEAAAKSMEFEATYGMVREESE 1303

Query: 1441 DNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQG 1494
            DNLCNHAWVDDTVTLIQKLISLEST+RCNDETEKNGIGSL+QLQQ+ARILVQQG
Sbjct: 1441 DNLCNHAWVDDTVTLIQKLISLESTMRCNDETEKNGIGSLEQLQQEARILVQQG 1303

[Close]

BLAST of Lsi02G024720 vs. NCBI nr
Match: XP_008451484.1 (PREDICTED: DNA mismatch repair protein MSH6 [Cucumis melo])

HSP 1 Score: 2261.1 bits (5858), Expect = 0.0e+00
Identity = 1222/1501 (81.41%), Postives = 1261/1501 (84.01%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAA THSIS+ TPSPSP+INSPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAARTHSISTLTPSPSPNINSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSS---SSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGR 120
            KRKKPLLVIG GA P SSS   S GPS L   +EKSHGDGV+GKKIKVYWPLDKTWYEGR
Sbjct: 61   KRKKPLLVIGGGAGPFSSSPSPSPGPSSLPDKEEKSHGDGVIGKKIKVYWPLDKTWYEGR 120

Query: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDME 180
            VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSS+PV+AA VEDM+
Sbjct: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSSPVTAAVVEDMD 180

Query: 181  DFN---DGDGSDDSKDEDWGKNVENEVSEEEDVELVE--EDEDGSEEDGVGKSRRKQGGK 240
            D N   DGDGSDDS+DEDW KNVENEVSEEEDV+LVE  EDEDGSEED VGKSRRKQGG+
Sbjct: 181  DINDLSDGDGSDDSRDEDWEKNVENEVSEEEDVDLVEEDEDEDGSEEDAVGKSRRKQGGQ 240

Query: 241  VESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDA 300
            VESKKRKMSNG+KVE APKK KSSGGSVTSGG +LSSME+KIKSE ASVL GINEIASDA
Sbjct: 241  VESKKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQLSSMETKIKSESASVLKGINEIASDA 300

Query: 301  LERFNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSK 360
            LERFNSREAEKFRFLKEDRKDANKR PGDPDYDP+TLYLPPYF+KNLSDGQRQWWEFKSK
Sbjct: 301  LERFNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLYLPPYFVKNLSDGQRQWWEFKSK 360

Query: 361  HMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQY 420
            HMDKVLFFK                            MGKFYELFEMDAH+GAKELDLQY
Sbjct: 361  HMDKVLFFK----------------------------MGKFYELFEMDAHIGAKELDLQY 420

Query: 421  MKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYA 480
            MKGEQPHCGFPERNFSLNVEKLARK       YRVLVIEQTETPEQLERRRKEKG     
Sbjct: 421  MKGEQPHCGFPERNFSLNVEKLARK------GYRVLVIEQTETPEQLERRRKEKG----- 480

Query: 481  YHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLM 540
                            +K+K         VVKREICAVVTKGTLTEGEMLSLNPDASYLM
Sbjct: 481  ----------------SKDK---------VVKREICAVVTKGTLTEGEMLSLNPDASYLM 540

Query: 541  AVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPA 600
            AVTE  HGLENQQAERILGVCVVDVATSR+ILGQFGDD ECSALCCLLSELRPVEIIKPA
Sbjct: 541  AVTEKFHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPA 600

Query: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASI 660
            KLLSPETERVLLTHTRNPLVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSS+EAS+
Sbjct: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASL 660

Query: 661  LNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720
            LN++ PGE DG S+LP VLSELV A ENGSWALSALGGILFYLKQAFLDETLLRFAKFEL
Sbjct: 661  LNDDTPGENDGLSFLPVVLSELVTAQENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720

Query: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780
            LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL
Sbjct: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780

Query: 781  ARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAK 840
            ARPLY VESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIF+NSEANGRNAK
Sbjct: 781  ARPLYDVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAK 840

Query: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLS 900
            NVVLYEDAAKKQLQEFISALRGCELMLQACSSL VIL +VESRRL+CLLTPGEGLPDL S
Sbjct: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHS 900

Query: 901  VLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSI 960
            VLSHFKDAFDWVEANSSGR+IPREGVD+EYDSACEKIKEIQSSLTKHLKEQR+LLGDTSI
Sbjct: 901  VLSHFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSI 960

Query: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAE 1020
            TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK           GFFRYWTPNIKKLL E
Sbjct: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK-----------GFFRYWTPNIKKLLVE 1020

Query: 1021 LFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGK 1080
            L LAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI                       
Sbjct: 1021 LSLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI----------------------- 1080

Query: 1081 LLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFV 1140
              AELDVLISLAIA DYYEG+TCQPLFSKSQCQ+EVPRFTAKNLGHPILRSD LGEGTFV
Sbjct: 1081 --AELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPRFTAKNLGHPILRSDSLGEGTFV 1140

Query: 1141 PNDITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVR 1200
            PNDIT+GGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQIGADVPAESFELAPVDRIFVR
Sbjct: 1141 PNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIGADVPAESFELAPVDRIFVR 1200

Query: 1201 MGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKT 1260
            MGAKDQIMSGQSTFLTELSETALML                                   
Sbjct: 1201 MGAKDQIMSGQSTFLTELSETALML----------------------------------- 1260

Query: 1261 AGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESV 1320
                                          SSATRNSLVILDELGRGTATSDGQAIAESV
Sbjct: 1261 ------------------------------SSATRNSLVILDELGRGTATSDGQAIAESV 1311

Query: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1380
            LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT
Sbjct: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1311

Query: 1381 CPKSYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYG 1440
            CPKSYG+                          +  L GLPNCVLTEAAAKSMEFEATYG
Sbjct: 1381 CPKSYGVN-------------------------VARLAGLPNCVLTEAAAKSMEFEATYG 1311

Query: 1441 MAGEESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1494
            MAGEESEDNLCNHAWVDDT+TLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ
Sbjct: 1441 MAGEESEDNLCNHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1311

[Close]

BLAST of Lsi02G024720 vs. NCBI nr
Match: KAA0046691.1 (DNA mismatch repair protein MSH6 [Cucumis melo var. makuwa])

HSP 1 Score: 2255.7 bits (5844), Expect = 0.0e+00
Identity = 1219/1500 (81.27%), Postives = 1258/1500 (83.87%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAA THSIS+ TPSPSP+INSPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAARTHSISTLTPSPSPNINSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSS---SSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGR 120
            KRKKPLLVIG GA P SSS   S GPS L   +EKSHGDGV+GKKIKVYWPLDKTWYEGR
Sbjct: 61   KRKKPLLVIGGGAGPFSSSPSPSPGPSSLPDKEEKSHGDGVIGKKIKVYWPLDKTWYEGR 120

Query: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDME 180
            VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSS+PV+AA VEDM+
Sbjct: 121  VKMFDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSSPVTAAVVEDMD 180

Query: 181  DFN---DGDGSDDSKDEDWGKNVENEVSEEEDVELVE--EDEDGSEEDGVGKSRRKQGGK 240
            D N   DGDGSDDS+DEDW KNVENEVSEEEDV+LVE  EDEDGSEED VGKSRRKQGG+
Sbjct: 181  DINDLSDGDGSDDSRDEDWEKNVENEVSEEEDVDLVEEDEDEDGSEEDAVGKSRRKQGGQ 240

Query: 241  VESKKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDA 300
            VESKKRKMSNG+KVE APKK KSSGGSVTSGG + SSME+KIKSE ASVL GINEIASDA
Sbjct: 241  VESKKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQFSSMETKIKSESASVLKGINEIASDA 300

Query: 301  LERFNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSK 360
            LERFNSREAEKFRFLKEDRKDANKR PGDPDYDP+TLYLPPYF+KNLSDGQRQWWEFKSK
Sbjct: 301  LERFNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLYLPPYFVKNLSDGQRQWWEFKSK 360

Query: 361  HMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQY 420
            HMDKVLFFK                            MGKFYELFEMDAH+GAKELDLQY
Sbjct: 361  HMDKVLFFK----------------------------MGKFYELFEMDAHIGAKELDLQY 420

Query: 421  MKGEQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYA 480
            MKGEQPHCGFPERNFSLNVEKLARK       YRVLVIEQTETPEQLERRRKEKG     
Sbjct: 421  MKGEQPHCGFPERNFSLNVEKLARK------GYRVLVIEQTETPEQLERRRKEKG----- 480

Query: 481  YHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLM 540
                              +K+ AL       KREICAVVTKGTLTEGEMLSLNPDASYLM
Sbjct: 481  ------------------SKDKAL-------KREICAVVTKGTLTEGEMLSLNPDASYLM 540

Query: 541  AVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPA 600
            AVTE  HGLENQQAERILGVCVVDVATSR+ILGQFGDD ECSALCCLLSELRPVEIIKPA
Sbjct: 541  AVTEKFHGLENQQAERILGVCVVDVATSRVILGQFGDDLECSALCCLLSELRPVEIIKPA 600

Query: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASI 660
            KLLSPETERVLLTHTRNPLVNELVPLLEFW+AEK+VQEVKRLFKGIANRSVSGSS+EAS+
Sbjct: 601  KLLSPETERVLLTHTRNPLVNELVPLLEFWNAEKTVQEVKRLFKGIANRSVSGSSSEASL 660

Query: 661  LNENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720
            LN++ PGE DG S+LP VLSELV AHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL
Sbjct: 661  LNDDTPGENDGLSFLPVVLSELVTAHENGSWALSALGGILFYLKQAFLDETLLRFAKFEL 720

Query: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780
            LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL
Sbjct: 721  LPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWL 780

Query: 781  ARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAK 840
            ARPLY VESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIF+NSEANGRNAK
Sbjct: 781  ARPLYDVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAK 840

Query: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLS 900
            NVVLYEDAAKKQLQEFISALRGCELMLQACSSL VIL +VESRRL+CLLTPGEGLPDL S
Sbjct: 841  NVVLYEDAAKKQLQEFISALRGCELMLQACSSLHVILPSVESRRLNCLLTPGEGLPDLHS 900

Query: 901  VLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSI 960
            VLSHFKDAFDWVEANSSGR+IPREGVD+EYDSACEKIKEIQSSLTKHLKEQR+LLGDTSI
Sbjct: 901  VLSHFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIKEIQSSLTKHLKEQRKLLGDTSI 960

Query: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAE 1020
            TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK           GFFRYWTPNIKKLL E
Sbjct: 961  TYVTVGKETHLLEVPESLQGNIPQTYELRSSKK-----------GFFRYWTPNIKKLLVE 1020

Query: 1021 LFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGK 1080
            L LAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI                       
Sbjct: 1021 LSLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAI----------------------- 1080

Query: 1081 LLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFV 1140
              AELDVLISLAIA DYYEG+TCQPLFSKSQCQ+EVP FTAKNLGHPILRSD LGEGTFV
Sbjct: 1081 --AELDVLISLAIASDYYEGYTCQPLFSKSQCQSEVPHFTAKNLGHPILRSDSLGEGTFV 1140

Query: 1141 PNDITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVR 1200
            PNDIT+GGSGANFILLTGPNMGGKSTLLRQVCLS+ILAQIGADVPAESFELAPVDRIFVR
Sbjct: 1141 PNDITIGGSGANFILLTGPNMGGKSTLLRQVCLSIILAQIGADVPAESFELAPVDRIFVR 1200

Query: 1201 MGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKT 1260
            MGAKDQIMSGQSTFLTELSETALML                                   
Sbjct: 1201 MGAKDQIMSGQSTFLTELSETALML----------------------------------- 1260

Query: 1261 AGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESV 1320
                                          SSATRNSLVILDELGRGTATSDGQAIAESV
Sbjct: 1261 ------------------------------SSATRNSLVILDELGRGTATSDGQAIAESV 1310

Query: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1380
            LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT
Sbjct: 1321 LEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGT 1310

Query: 1381 CPKSYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYG 1440
            CPKSYG+                          +  L GLPNCVLTEAAAKSMEFEATYG
Sbjct: 1381 CPKSYGVN-------------------------VARLAGLPNCVLTEAAAKSMEFEATYG 1310

Query: 1441 MAGEESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1493
            MAGEESEDNLCNHAWVDDT+TLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ
Sbjct: 1441 MAGEESEDNLCNHAWVDDTITLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQ 1310

[Close]

BLAST of Lsi02G024720 vs. NCBI nr
Match: XP_004136154.1 (DNA mismatch repair protein MSH6 [Cucumis sativus] >KGN45011.1 hypothetical protein Csa_016531 [Cucumis sativus])

HSP 1 Score: 2248.0 bits (5824), Expect = 0.0e+00
Identity = 1215/1498 (81.11%), Postives = 1258/1498 (83.98%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAANTHSISSPTPSPSPSINSPPSVQS 60
            MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAA THSISSPTPSPSP+INSPPSVQS
Sbjct: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNSAARTHSISSPTPSPSPNINSPPSVQS 60

Query: 61   KRKKPLLVIGAGAAPSSSSSSGPSPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKM 120
            KRKKPLLVIG GA P SSSS G S L  A+EKSHGDGV+GKKIKVYWPLDKTWYEGRVKM
Sbjct: 61   KRKKPLLVIGGGAPPFSSSSPGSSSLPDAEEKSHGDGVIGKKIKVYWPLDKTWYEGRVKM 120

Query: 121  FDEKAGKHLVQYDDAEEEMLVLGNEKIEWVEESAKKFKRLRRGSSAPVSAAAVEDMEDFN 180
            FDEKAGKHLVQYDDAEEE+LVLGNEKIEWVEESAKKFKRLRRGSS PVSAA +EDM+D N
Sbjct: 121  FDEKAGKHLVQYDDAEEELLVLGNEKIEWVEESAKKFKRLRRGSSPPVSAAVLEDMDDLN 180

Query: 181  ---DGDGSDDSKDEDWGKNVENEVSEEEDVELVE--EDEDGSEEDGVGKSRRKQGGKVES 240
               DGDGSDDS+DEDWGKNVENEVSEEEDV+LVE  EDEDGSEEDGVGKSRRKQGG+VES
Sbjct: 181  DLSDGDGSDDSRDEDWGKNVENEVSEEEDVDLVEENEDEDGSEEDGVGKSRRKQGGQVES 240

Query: 241  KKRKMSNGEKVESAPKKSKSSGGSVTSGGFRLSSMESKIKSERASVLNGINEIASDALER 300
            KKRKMSNG+KVE APKK KSSGGSVTSGG +LSSME+KIKSE  SVL GINEIASDALER
Sbjct: 241  KKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQLSSMETKIKSESTSVLKGINEIASDALER 300

Query: 301  FNSREAEKFRFLKEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMD 360
            FNSREAEKFRFLKEDRKDANKR PGDPDYDP+TL+LPPYF+KNLSDGQRQWWEFKSKHMD
Sbjct: 301  FNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLHLPPYFVKNLSDGQRQWWEFKSKHMD 360

Query: 361  KVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKG 420
            KVLFFK                            MGKFYELFEMDAH+GAKELDLQYMKG
Sbjct: 361  KVLFFK----------------------------MGKFYELFEMDAHIGAKELDLQYMKG 420

Query: 421  EQPHCGFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHK 480
            +QPHCGFPERNFSLNVEKLARK       YRVLVIEQTETPEQLERRRKEKG        
Sbjct: 421  DQPHCGFPERNFSLNVEKLARK------GYRVLVIEQTETPEQLERRRKEKG-------- 480

Query: 481  LPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVT 540
                         +K+K         VVKREICAVVTKGTLTEGEMLSLNPDASYLMAVT
Sbjct: 481  -------------SKDK---------VVKREICAVVTKGTLTEGEMLSLNPDASYLMAVT 540

Query: 541  ENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLL 600
            EN +GLENQQ ERILGVCVVDVATSR+ILGQFGDDSECSALCCLLSELRPVEIIKPAKLL
Sbjct: 541  ENFYGLENQQ-ERILGVCVVDVATSRVILGQFGDDSECSALCCLLSELRPVEIIKPAKLL 600

Query: 601  SPETERVLLTHTRNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNE 660
            SPETERVLLTHTRNPLVNELVPLLEFWDAEK+VQEVKRLFKGIANRSVSGSS+EAS+LN+
Sbjct: 601  SPETERVLLTHTRNPLVNELVPLLEFWDAEKTVQEVKRLFKGIANRSVSGSSSEASLLND 660

Query: 661  NAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPC 720
            NA  E DG SY+P+VLSELV A ENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPC
Sbjct: 661  NAARENDGLSYMPDVLSELVTADENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPC 720

Query: 721  SGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARP 780
            SGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARP
Sbjct: 721  SGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARP 780

Query: 781  LYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVV 840
            LYHVESI+ARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIF+NSEANGRNA NVV
Sbjct: 781  LYHVESIEARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAINVV 840

Query: 841  LYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLS 900
            LYEDAAKKQLQEFISALRGCELMLQACSSLRVIL NV+SRRLDCLLTPGEGLPDL SVLS
Sbjct: 841  LYEDAAKKQLQEFISALRGCELMLQACSSLRVILPNVKSRRLDCLLTPGEGLPDLHSVLS 900

Query: 901  HFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYV 960
            HFKDAFDWVEANSSGR+IPREGVD+EYDSACEKI+EIQSSLTKHLKEQR+LLGDTSITYV
Sbjct: 901  HFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIREIQSSLTKHLKEQRKLLGDTSITYV 960

Query: 961  TVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAELFL 1020
            TVGKETHLLEVPESLQGNIPQTYELRSSKK           GFFRYWTPNIKKLLAEL L
Sbjct: 961  TVGKETHLLEVPESLQGNIPQTYELRSSKK-----------GFFRYWTPNIKKLLAELSL 1020

Query: 1021 AESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLA 1080
            AESEKESSLKSILQRLI KFCEHHLQWRQLVSAI                         A
Sbjct: 1021 AESEKESSLKSILQRLIRKFCEHHLQWRQLVSAI-------------------------A 1080

Query: 1081 ELDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPND 1140
            ELDVLISLAIA DYYEG+TCQPLFSKSQCQNEVPRFTAKNLGHPILRSD LGEGTFVPND
Sbjct: 1081 ELDVLISLAIASDYYEGYTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDSLGEGTFVPND 1140

Query: 1141 ITLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGA 1200
            IT+GGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGA
Sbjct: 1141 ITIGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGA 1200

Query: 1201 KDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGP 1260
            +DQIMSGQSTFLTELSETALML                                      
Sbjct: 1201 RDQIMSGQSTFLTELSETALML-------------------------------------- 1260

Query: 1261 FHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEH 1320
                                       SSATRNS+VILDELGRGTATSDGQAIAESVLEH
Sbjct: 1261 ---------------------------SSATRNSVVILDELGRGTATSDGQAIAESVLEH 1307

Query: 1321 FVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPK 1380
            FVSKVQCRGVFSTHYHRLALAY+KDPRVSL+HMACRVGEGNNGLEEVTFLYRLTPGTCPK
Sbjct: 1321 FVSKVQCRGVFSTHYHRLALAYHKDPRVSLHHMACRVGEGNNGLEEVTFLYRLTPGTCPK 1307

Query: 1381 SYGLTRNNTRHKADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYGMAG 1440
            SYG+                          +  L GLPNCVLTEAAAKSMEFE TYGMAG
Sbjct: 1381 SYGVN-------------------------VARLAGLPNCVLTEAAAKSMEFEVTYGMAG 1307

Query: 1441 EESEDNLCNHAWVDDTVTLIQKLISLESTVRCNDETEKNGIGSLKQLQQQARILVQQG 1494
            EESE +LCN  WVDDT TLIQKLISLES VRCNDETEKNGIGSLKQLQQQARILVQQG
Sbjct: 1441 EESEVDLCNQTWVDDTTTLIQKLISLESAVRCNDETEKNGIGSLKQLQQQARILVQQG 1307

[Close]

BLAST of Lsi02G024720 vs. TAIR 10
Match: AT4G02070.1 (MUTS homolog 6 )

HSP 1 Score: 1387.1 bits (3589), Expect = 0.0e+00
Identity = 819/1496 (54.75%), Postives = 978/1496 (65.37%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNS---------------AANTHSISSPT 60
            M+ SRR  +GRSPLVNQQRQITSFF K  +  +S                +N  +  SP+
Sbjct: 1    MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60

Query: 61   PSPS-----PSINSPPS-----------------VQSKRKKPLLVIGAGAAPSSSSSSGP 120
            PSPS     P +N  PS                 VQSK KKPLLVIG   +P  S     
Sbjct: 61   PSPSPPKKTPKLNPNPSSNLPARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSVVI-- 120

Query: 121  SPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKMFDEKAGKHLVQYDDAEEEMLVLG 180
                     ++GD VVGK+++VYWPLDK WY+G V  +D+  GKH+V+Y+D EEE L LG
Sbjct: 121  ---------TYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLG 180

Query: 181  NEKIEWV--EESAKKFKRLRRGSSA--PVSAAAVEDMEDFN---DGDGSDDSKDEDWGKN 240
             EK EWV  E+S  +F RL+RG+SA   V   + +D+E  N   D    DDS DEDWGKN
Sbjct: 181  KEKTEWVVGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDDSSDEDWGKN 240

Query: 241  VENEV--SEEEDVELVEE----DEDGSEEDGVGKSRRKQGGKVESKKRKMSNGEKVESAP 300
            V  EV  SEE+DVELV+E    +E+  EE     S+  +  K +S+KRK S   K     
Sbjct: 241  VGKEVCESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTK-SGGE 300

Query: 301  KKSKSSGGSVTSGGFRLSSMESKIKSERAS-VLNGI--NEIASDALERFNSREAEKFRFL 360
            KKSK+  G++   GF+ S +E   K  +A  V+ G+  N +  DAL RF +R++EKFRFL
Sbjct: 301  KKSKTDTGTILK-GFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFL 360

Query: 361  KEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMDKVLFFKVRLYAS 420
              DR+DA +RRP D +YDPRTLYLPP F+K L+ GQRQWWEFK+KHMDKV+FFK      
Sbjct: 361  GVDRRDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFK------ 420

Query: 421  LVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF 480
                                  MGKFYELFEMDAHVGAKELD+QYMKGEQPHCGFPE+NF
Sbjct: 421  ----------------------MGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNF 480

Query: 481  SLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHKLPHVFNLNNYFL 540
            S+N+EKL RK       YRVLV+EQTETP+QLE+RRKE G                    
Sbjct: 481  SVNIEKLVRK------GYRVLVVEQTETPDQLEQRRKETG-------------------- 540

Query: 541  PTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSHGLENQQAE 600
             +K+K         VVKRE+CAVVTKGTLT+GEML  NPDASYLMA+TE    L N  AE
Sbjct: 541  -SKDK---------VVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAE 600

Query: 601  RILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTHT 660
               GVC+VDVAT +IILGQF DD +CSAL CLLSE+RPVEIIKPAK+LS  TER ++  T
Sbjct: 601  HNFGVCLVDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQT 660

Query: 661  RNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNENAPGEKDGFSYL 720
            RNPLVN LVPL EFWD+EK++ EV  ++K I  +  S  S+E  IL        DG S+L
Sbjct: 661  RNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQPSSAYSSEGKILG-------DGSSFL 720

Query: 721  PNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSGFSDVISKPYM 780
            P +LSEL    +NGS ALSALGG ++YL+QAFLDE+LLRFAKFE LP   FS+V  K +M
Sbjct: 721  PKMLSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHM 780

Query: 781  VLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVESIKARQG 840
            VLDAAALENLEIFENSRNG  SGTLY+QLN C+TA GKRLLKTWLARPLY+ E IK RQ 
Sbjct: 781  VLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQD 840

Query: 841  AVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVVLYEDAAKKQLQE 900
            AVA LRG+NL +SLEFRK+LS+LPDMERL+AR+F++ EA+GRN   VVLYED AKKQ+QE
Sbjct: 841  AVAILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQE 900

Query: 901  FISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLSHFKDAFDWVEAN 960
            FIS LRGCE M +ACSSLR IL +  SRRL  LLTPG+ LP++ S + +FKDAFDWVEA+
Sbjct: 901  FISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAH 960

Query: 961  SSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKETHLLEVP 1020
            +SGR+IP EG D EYD AC+ ++E +SSL KHLKEQR+LLGD SI YVTVGK+ +LLEVP
Sbjct: 961  NSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVP 1020

Query: 1021 ESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAELFLAESEKESSLKSI 1080
            ESL G++P  YEL SSKK           G  RYWTP IKKLL EL  A+SEKES+LKSI
Sbjct: 1021 ESLSGSVPHDYELCSSKK-----------GVSRYWTPTIKKLLKELSQAKSEKESALKSI 1080

Query: 1081 LQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDVLISLAIAI 1140
             QRLIG+FCEH  +WRQLVSA                          AELDVLISLA A 
Sbjct: 1081 SQRLIGRFCEHQEKWRQLVSA-------------------------TAELDVLISLAFAS 1140

Query: 1141 DYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPNDITLGGS-GANFI 1200
            D YEG  C+P+ S S   + VP  +A  LGHP+LR D LG G+FVPN++ +GG+  A+FI
Sbjct: 1141 DSYEGVRCRPVISGS-TSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFI 1200

Query: 1201 LLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTF 1260
            LLTGPNMGGKSTLLRQVCL+VILAQIGADVPAE+FE++PVD+I VRMGAKD IM+GQSTF
Sbjct: 1201 LLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTF 1260

Query: 1261 LTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDTFFSRYFC 1320
            LTELSETA+ML                                                 
Sbjct: 1261 LTELSETAVML------------------------------------------------- 1285

Query: 1321 FLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGVF 1380
                            +SATRNSLV+LDELGRGTATSDGQAIAESVLEHF+ KVQCRG F
Sbjct: 1321 ----------------TSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFF 1285

Query: 1381 STHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYGLTRNNTRH 1440
            STHYHRL++ Y  +P+VSL HMAC++GEG  G+EEVTFLYRLTPG CPKSYG+       
Sbjct: 1381 STHYHRLSVDYQTNPKVSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVN------ 1285

Query: 1441 KADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYGMAGEESEDNL 1443
                               +  L GLP+ VL  A  KS EFEA YG    +++  L
Sbjct: 1441 -------------------VARLAGLPDYVLQRAVIKSQEFEALYGKNHRKTDHKL 1285

[Close]

BLAST of Lsi02G024720 vs. TAIR 10
Match: AT4G02070.2 (MUTS homolog 6 )

HSP 1 Score: 1377.5 bits (3564), Expect = 0.0e+00
Identity = 817/1496 (54.61%), Postives = 975/1496 (65.17%), Query Frame = 0


Query: 1    MSSSRRSSNGRSPLVNQQRQITSFFTKKPTGDNS---------------AANTHSISSPT 60
            M+ SRR  +GRSPLVNQQRQITSFF K  +  +S                +N  +  SP+
Sbjct: 1    MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60

Query: 61   PSPS-----PSINSPPS-----------------VQSKRKKPLLVIGAGAAPSSSSSSGP 120
            PSPS     P +N  PS                 VQSK KKPLLVIG   +P  S     
Sbjct: 61   PSPSPPKKTPKLNPNPSSNLPARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSVVI-- 120

Query: 121  SPLAAAKEKSHGDGVVGKKIKVYWPLDKTWYEGRVKMFDEKAGKHLVQYDDAEEEMLVLG 180
                     ++GD VVGK+++VYWPLDK WY+G V  +D+  GKH+V+Y+D EEE L LG
Sbjct: 121  ---------TYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLG 180

Query: 181  NEKIEWV--EESAKKFKRLRRGSSA--PVSAAAVEDMEDFN---DGDGSDDSKDEDWGKN 240
             EK EWV  E+S  +F RL+RG+SA   V   + +D+E  N   D    DDS DEDWGKN
Sbjct: 181  KEKTEWVVGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDDSSDEDWGKN 240

Query: 241  VENEV--SEEEDVELVEE----DEDGSEEDGVGKSRRKQGGKVESKKRKMSNGEKVESAP 300
            V  EV  SEE+DVELV+E    +E+  EE     S+  +  K +S+KRK S   K     
Sbjct: 241  VGKEVCESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTK-SGGE 300

Query: 301  KKSKSSGGSVTSGGFRLSSMESKIKSERAS-VLNGI--NEIASDALERFNSREAEKFRFL 360
            KKSK+  G++   GF+ S +E   K  +A  V+ G+  N +  DAL RF +R++EKFRFL
Sbjct: 301  KKSKTDTGTILK-GFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFL 360

Query: 361  KEDRKDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSKHMDKVLFFKVRLYAS 420
                 DA +RRP D +YDPRTLYLPP F+K L+ GQRQWWEFK+KHMDKV+FFK      
Sbjct: 361  ---GVDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFK------ 420

Query: 421  LVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF 480
                                  MGKFYELFEMDAHVGAKELD+QYMKGEQPHCGFPE+NF
Sbjct: 421  ----------------------MGKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNF 480

Query: 481  SLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQGMYAYHKLPHVFNLNNYFL 540
            S+N+EKL RK       YRVLV+EQTETP+QLE+RRKE G                    
Sbjct: 481  SVNIEKLVRK------GYRVLVVEQTETPDQLEQRRKETG-------------------- 540

Query: 541  PTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTENSHGLENQQAE 600
             +K+K         VVKRE+CAVVTKGTLT+GEML  NPDASYLMA+TE    L N  AE
Sbjct: 541  -SKDK---------VVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAE 600

Query: 601  RILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTHT 660
               GVC+VDVAT +IILGQF DD +CSAL CLLSE+RPVEIIKPAK+LS  TER ++  T
Sbjct: 601  HNFGVCLVDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQT 660

Query: 661  RNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNENAPGEKDGFSYL 720
            RNPLVN LVPL EFWD+EK++ EV  ++K I  +  S  S+E  IL        DG S+L
Sbjct: 661  RNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQPSSAYSSEGKILG-------DGSSFL 720

Query: 721  PNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSGFSDVISKPYM 780
            P +LSEL    +NGS ALSALGG ++YL+QAFLDE+LLRFAKFE LP   FS+V  K +M
Sbjct: 721  PKMLSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHM 780

Query: 781  VLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVESIKARQG 840
            VLDAAALENLEIFENSRNG  SGTLY+QLN C+TA GKRLLKTWLARPLY+ E IK RQ 
Sbjct: 781  VLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQD 840

Query: 841  AVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVVLYEDAAKKQLQE 900
            AVA LRG+NL +SLEFRK+LS+LPDMERL+AR+F++ EA+GRN   VVLYED AKKQ+QE
Sbjct: 841  AVAILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQE 900

Query: 901  FISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLSHFKDAFDWVEAN 960
            FIS LRGCE M +ACSSLR IL +  SRRL  LLTPG+ LP++ S + +FKDAFDWVEA+
Sbjct: 901  FISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAH 960

Query: 961  SSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKETHLLEVP 1020
            +SGR+IP EG D EYD AC+ ++E +SSL KHLKEQR+LLGD SI YVTVGK+ +LLEVP
Sbjct: 961  NSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVP 1020

Query: 1021 ESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIKKLLAELFLAESEKESSLKSI 1080
            ESL G++P  YEL SSKK           G  RYWTP IKKLL EL  A+SEKES+LKSI
Sbjct: 1021 ESLSGSVPHDYELCSSKK-----------GVSRYWTPTIKKLLKELSQAKSEKESALKSI 1080

Query: 1081 LQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDVLISLAIAI 1140
             QRLIG+FCEH  +WRQLVSA                          AELDVLISLA A 
Sbjct: 1081 SQRLIGRFCEHQEKWRQLVSA-------------------------TAELDVLISLAFAS 1140

Query: 1141 DYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPNDITLGGS-GANFI 1200
            D YEG  C+P+ S S   + VP  +A  LGHP+LR D LG G+FVPN++ +GG+  A+FI
Sbjct: 1141 DSYEGVRCRPVISGS-TSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFI 1200

Query: 1201 LLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTF 1260
            LLTGPNMGGKSTLLRQVCL+VILAQIGADVPAE+FE++PVD+I VRMGAKD IM+GQSTF
Sbjct: 1201 LLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTF 1260

Query: 1261 LTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDTFFSRYFC 1320
            LTELSETA+ML                                                 
Sbjct: 1261 LTELSETAVML------------------------------------------------- 1282

Query: 1321 FLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGVF 1380
                            +SATRNSLV+LDELGRGTATSDGQAIAESVLEHF+ KVQCRG F
Sbjct: 1321 ----------------TSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFF 1282

Query: 1381 STHYHRLALAYYKDPRVSLYHMACRVGEGNNGLEEVTFLYRLTPGTCPKSYGLTRNNTRH 1440
            STHYHRL++ Y  +P+VSL HMAC++GEG  G+EEVTFLYRLTPG CPKSYG+       
Sbjct: 1381 STHYHRLSVDYQTNPKVSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVN------ 1282

Query: 1441 KADENRSTGKILSIISIKYLCVLRGLPNCVLTEAAAKSMEFEATYGMAGEESEDNL 1443
                               +  L GLP+ VL  A  KS EFEA YG    +++  L
Sbjct: 1441 -------------------VARLAGLPDYVLQRAVIKSQEFEALYGKNHRKTDHKL 1282

[Close]

BLAST of Lsi02G024720 vs. TAIR 10
Match: AT3G24495.1 (MUTS homolog 7 )

HSP 1 Score: 341.3 bits (874), Expect = 4.0e-93
Identity = 324/1111 (29.16%), Postives = 465/1111 (41.85%), Query Frame = 0


Query: 294  ERFNSREAEKFRFLKEDR-KDANKRRPGDPDYDPRTLYLPPYFLKNLSDGQRQWWEFKSK 353
            E+    E  KF +L+  R +DAN+RRP DP YD +TL++PP   K +S  Q+Q+W  KS+
Sbjct: 221  EKKEVNEGTKFEWLESSRIRDANRRRPDDPLYDRKTLHIPPDVFKKMSASQKQYWSVKSE 280

Query: 354  HMDKVLFFKVRLYASLVNWWFMLLLDSNALPMFFLKQMGKFYELFEMDAHVGAKELDLQY 413
            +MD VLFFKV                            GKFYEL+E+DA +G KELD + 
Sbjct: 281  YMDIVLFFKV----------------------------GKFYELYELDAELGHKELDWKM 340

Query: 414  MKGEQPHC---GFPERNFSLNVEKLARKPALAEQAYRVLVIEQTETPEQLERRRKEKGQG 473
                   C   G  E      V+KL  +       Y+V  IEQ ET +Q + R       
Sbjct: 341  TMSGVGKCRQVGISESGIDEAVQKLLAR------GYKVGRIEQLETSDQAKARGAN---- 400

Query: 474  MYAYHKLPHVFNLNNYFLPTKNKNHALSHPLEVVKREICAVVTKGTLTEGEMLSLNPDAS 533
                                            ++ R++  V+T  T +EG   ++ PDA 
Sbjct: 401  -------------------------------TIIPRKLVQVLTPSTASEG---NIGPDAV 460

Query: 534  YLMAVTENSHGLENQQAERILGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEII 593
            +L+A+ E    +E Q+   + G   VD A  R  +G   DD+ C+AL  LL ++ P E++
Sbjct: 461  HLLAIKEIK--MELQKCSTVYGFAFVDCAALRFWVGSISDDASCAALGALLMQVSPKEVL 520

Query: 594  KPAKLLSPETERVLLTHT-RNPLVNELVPLLEFWDAEKSVQEVKRLFKGIANRSVSGSSN 653
              +K LS E ++ L  +T       +L P+ +                      V G ++
Sbjct: 521  YDSKGLSREAQKALRKYTLTGSTAVQLAPVPQ----------------------VMGDTD 580

Query: 654  EASILN-ENAPGEKDGFSYLPNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRF 713
             A + N   + G   G S   N   + +N  +    ALSALG ++ +L +  L++ L   
Sbjct: 581  AAGVRNIIESNGYFKGSSESWNCAVDGLNECD---VALSALGELINHLSRLKLEDVL--- 640

Query: 714  AKFELLPCSGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRL 773
               ++ P       + +  + +D   + NLEIF NS +G  SGTLY  L++CV+  GKRL
Sbjct: 641  KHGDIFPYQ-----VYRGCLRIDGQTMVNLEIFNNSCDGGPSGTLYKYLDNCVSPTGKRL 700

Query: 774  LKTWLARPLYHVESIKARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEAN 833
            L+ W+  PL  VESI  R   V     ++ S  +   + L KLPD+ERLL RI    +++
Sbjct: 701  LRNWICHPLKDVESINKRLDVVEEFTANSESMQIT-GQYLHKLPDLERLLGRI----KSS 760

Query: 834  GRNAKNVVLYEDAAKKQLQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGL 893
             R++ +V              + AL G +++ Q   +   I+                  
Sbjct: 761  VRSSASV--------------LPALLGKKVLKQRVKAFGQIVKGF--------------- 820

Query: 894  PDLLSVLSHFKDAFDWVEANSSGRIIPREGVDMEYDSACEKIKEIQSSLTKHLKEQRRLL 953
                                       R G+D+    A +K   + S L K  K      
Sbjct: 821  ---------------------------RSGIDLLL--ALQKESNMMSLLYKLCK------ 880

Query: 954  GDTSITYVTVGKETHLLEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNIK 1013
                I     G E  L +   ++  + P                         Y   ++ 
Sbjct: 881  --LPILVGKSGLELFLSQFEAAIDSDFP------------------------NYQNQDVT 940

Query: 1014 KLLAELFLAESEKESSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSW 1073
               AE               L  LI  F E   QW +++  I+                 
Sbjct: 941  DENAE--------------TLTILIELFIERATQWSEVIHTISC---------------- 1000

Query: 1074 LMLGKLLAELDVLISLAIAIDYYEGHTCQPLF---SKSQCQNEV---PRFTAKNLGHPIL 1133
                     LDVL S AIA     G   +P+    S++  QN+    P    + L HP  
Sbjct: 1001 ---------LDVLRSFAIAASLSAGSMARPVIFPESEATDQNQKTKGPILKIQGLWHPFA 1022

Query: 1134 RSDLLGEGTF-VPNDITLG----GSGA---NFILLTGPNMGGKSTLLRQVCLSVILAQIG 1193
               +  +G   VPNDI LG     SG+     +LLTGPNMGGKSTLLR  CL+VI AQ+G
Sbjct: 1061 ---VAADGQLPVPNDILLGEARRSSGSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLG 1022

Query: 1194 ADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLR 1253
              VP ES E++ VD IF R+GA D+IM+G+STFL E +ETA +L                
Sbjct: 1121 CYVPCESCEISLVDTIFTRLGASDRIMTGESTFLVECTETASVL---------------- 1022

Query: 1254 GLSWLNFLVKGLLPHVAKTAGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVIL 1313
                                                              +AT++SLVIL
Sbjct: 1181 -------------------------------------------------QNATQDSLVIL 1022

Query: 1314 DELGRGTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDPRVSLYHMACRVG 1373
            DELGRGT+T DG AIA SV  H V KVQCR +F+THYH L   +   PRV+  HMAC   
Sbjct: 1241 DELGRGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPRVTSKHMACAFK 1022

Query: 1374 EGNNGL-----EEVTFLYRLTPGTCPKSYGL 1380
              ++       +++ FLYRLT G CP+SYGL
Sbjct: 1301 SRSDYQPRGCDQDLVFLYRLTEGACPESYGL 1022

[Close]

BLAST of Lsi02G024720 vs. TAIR 10
Match: AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )

HSP 1 Score: 210.7 bits (535), Expect = 8.1e-54
Identity = 252/991 (25.43%), Postives = 396/991 (39.96%), Query Frame = 0


Query: 505  REICAVVTKGTLTEGEMLS--------LNPDASYLMAVTEN-------SHGLENQQAERI 564
            R + A+ TK TL   E +S            +++L+ V +          G+E     R+
Sbjct: 203  RGLSALYTKATLEAAEDISGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRV 262

Query: 565  LGVCVVDVATSRIILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTHTRN 624
             GV  V+++T  ++  +F D+   S L  ++  L P E++   + LS +TE+ L+ H   
Sbjct: 263  -GVVGVEISTGEVVYEEFNDNFMRSGLEAVILSLSPAELLL-GQPLSQQTEKFLVAHA-G 322

Query: 625  PLVNELV--PLLEFWDAEKSVQEVKRLFKGIANRSVSGSSNEASILNENAPGEKDGFSYL 684
            P  N  V    L+ +    +V EV  L + I   S     ++  +  E A   + G S L
Sbjct: 323  PTSNVRVERASLDCFSNGNAVDEVISLCEKI---SAGNLEDDKEMKLEAA---EKGMSCL 382

Query: 685  PNVLSELVNAHENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPCSGFSDVISKPYM 744
               +  ++N        + AL     +LKQ   +  L + A F  L         S   M
Sbjct: 383  --TVHTIMNMPH---LTVQALALTFCHLKQFGFERILYQGASFRSLS--------SNTEM 442

Query: 745  VLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVESIKARQG 804
             L A  L+ LE+ +N+ +G  SG+L+  +NH +T +G RLL+ W+  PL     I AR  
Sbjct: 443  TLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLD 502

Query: 805  AVASL---RGDNLSFSL----------------EF-------RKALSKLPDMERLLARIF 864
            AV+ +    G + S  L                EF         A+S+  D++R + RIF
Sbjct: 503  AVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIF 562

Query: 865  ANSEANGRNAKNVVLYEDA---AKKQLQEF----ISALRGCELMLQACSSLRVILSNVES 924
              +      A   +   +A   A KQ+Q       S +R  +      + LR ++S + S
Sbjct: 563  HRT----AKATEFIAVMEAILLAGKQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISS 622

Query: 925  --------RRLDCLLTPGEGLPDLLSVLSHFKDAFDWVEANSSGRIIPREGVDMEYDSAC 984
                    + L  L        DLL +L    D F                   E   A 
Sbjct: 623  PVVVDNAGKLLSALNKEAAVRGDLLDILITSSDQFP------------------ELAEAR 682

Query: 985  EKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKETHLLEVPESLQGNIPQTY-ELRSSKK 1044
            + +  I+  L   +   R+ L   ++ ++ V   THL+E+P  +   +P  + ++ S+KK
Sbjct: 683  QAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELP--VDSKVPMNWVKVNSTKK 742

Query: 1045 IYIISSYVNCEGFFRYWTPNIKKLLAELFLAESEKESSLKSILQRLIGKFCEHHLQWRQL 1104
                          RY  P I   L EL LA        ++     +  F  ++  ++  
Sbjct: 743  T------------IRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAA 802

Query: 1105 VSAIAAGVIYIPLPYQVQNVSWLMLGKLLAELDVLISLAIAIDYYEGHTCQPLFSKSQCQ 1164
            V A+AA                         LD L SL+        +  +P F    C 
Sbjct: 803  VQALAA-------------------------LDCLHSLSTL--SRNKNYVRPEF-VDDC- 862

Query: 1165 NEVPRFTAKNLGHPILRSDLLGEGTFVPNDITLGGSGANFILLTGPNMGGKSTLLRQVCL 1224
             E      ++  HP+L + L  +  FVPND  L   G    ++TGPNMGGKS  +RQV L
Sbjct: 863  -EPVEINIQSGRHPVLETIL--QDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVAL 922

Query: 1225 SVILAQIGADVPAESFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLLLCSFKRF 1284
              I+AQ+G+ VPA   +L  +D +F RMGA D I  G+STFL ELSE + ++  CS +  
Sbjct: 923  ISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSR-- 982

Query: 1285 KLCCPPLRGLSWLNFLVKGLLPHVAKTAGPFHDTFFSRYFCFLYCLTKKDTLNWLMQSSA 1344
                                                                        
Sbjct: 983  ------------------------------------------------------------ 1022

Query: 1345 TRNSLVILDELGRGTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYYKDP-RVS 1404
               SLVILDELGRGT+T DG AIA + L+H +++ +C  +F THY  +A      P  V 
Sbjct: 1043 ---SLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVG 1022

Query: 1405 LYH---MACRVGEGNNGLEEVTFLYRLTPGTCPKSYGLTRNNTRHKADENRSTGKILSII 1433
             YH   +  +  +G+   ++VT+LY+L  G C +S+G                 K+  + 
Sbjct: 1103 TYHVSYLTLQKDKGSYDHDDVTYLYKLVRGLCSRSFGF----------------KVAQLA 1022

[Close]

BLAST of Lsi02G024720 vs. TAIR 10
Match: AT3G18524.1 (MUTS homolog 2 )

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-35
Identity = 159/670 (23.73%), Postives = 272/670 (40.60%), Query Frame = 0


Query: 726  YMVLDAAALENLEIFENSRNGDSSGTLYSQLNH-CVTAFGKRLLKTWLARPLYHVESIKA 785
            +M LD+AA+  L + E+  + + + +L+  +N  C    GKRLL  WL +PL  +  IK 
Sbjct: 293  FMRLDSAAMRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKT 352

Query: 786  RQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFANSEANGRNAKNVVLYEDAAKKQ 845
            R   V     +      + R+ L ++ D+ERLL  +       G     + LY+   +  
Sbjct: 353  RLDIVQCF-VEEAGLRQDLRQHLKRISDVERLLRSL---ERRRGGLQHIIKLYQSTIR-- 412

Query: 846  LQEFISALRGCELMLQACSSLRVILSNVESRRLDCLLTPGEGLPDLLSVLSHFKDAFDWV 905
               FI        M Q       ++S    ++L+            LS   H     D V
Sbjct: 413  -LPFIKT-----AMQQYTGEFASLISERYLKKLEA-----------LSDQDHLGKFIDLV 472

Query: 906  EANSSGRIIPREGVDM-EYDSACEKIKEIQSSLTKHLKEQRRLLGDTSITYVTVGKETHL 965
            E +          VD+ + ++    I     +    LK+Q+ LL           ++ H 
Sbjct: 473  ECS----------VDLDQLENGEYMISSSYDTKLASLKDQKELL----------EQQIHE 532

Query: 966  LEVPESLQGNIPQTYELRSSKKIYIISSYVNCEGFFRYWTPNI-KKLLAELFLAESEKE- 1025
            L    +++ ++     L+  K     + + +     +   P I KKL  +  + E+ K+ 
Sbjct: 533  LHKKTAIELDLQVDKALKLDK----AAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 592

Query: 1026 -----SSLKSILQRLIGKFCEHHLQWRQLVSAIAAGVIYIPLPYQVQNVSWLMLGKLLAE 1085
                 + LK +  +      ++    ++LV  +   V      ++        L  LL+E
Sbjct: 593  VKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFE-------DLAGLLSE 652

Query: 1086 LDVLISLAIAIDYYEGHTCQPLFSKSQCQNEVPRFTAKNLGHPILRSDLLGEGTFVPNDI 1145
            +DVL+S A          C+P  + S   + V     +   HP + +       F+PND 
Sbjct: 653  MDVLLSFADLAASCPTPYCRPEITSSDAGDIV----LEGSRHPCVEAQ--DWVNFIPNDC 712

Query: 1146 TLGGSGANFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAESFELAPVDRIFVRMGAK 1205
             L    + F ++TGPNMGGKST +RQV + V++AQ+G+ VP +   ++  D IF R+GA 
Sbjct: 713  RLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAG 772

Query: 1206 DQIMSGQSTFLTELSETALMLLLCSFKRFKLCCPPLRGLSWLNFLVKGLLPHVAKTAGPF 1265
            D  + G STF+ E+ ETA +L                                       
Sbjct: 773  DCQLRGVSTFMQEMLETASIL--------------------------------------- 832

Query: 1266 HDTFFSRYFCFLYCLTKKDTLNWLMQSSATRNSLVILDELGRGTATSDGQAIAESVLEHF 1325
                                        A+  SL+I+DELGRGT+T DG  +A ++ EH 
Sbjct: 833  --------------------------KGASDKSLIIIDELGRGTSTYDGFGLAWAICEHL 834

Query: 1326 VSKVQCRGVFSTHYHRLALAYYKDPRVS-------LYHMACRVGEGNNGLEEVTFLYRLT 1380
            V   +   +F+TH+H L      +  VS        +H++  +   +    ++T LY++ 
Sbjct: 893  VQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANFHVSAHI---DTESRKLTMLYKVE 834

The following BLAST results are available for this feature:

BLAST of Lsi02G024720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04716	0.0e+00	54.75	DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana OX=3702 GN=MSH6 PE=1 SV...	[more]
E1BYJ2	1.8e-154	31.57	DNA mismatch repair protein Msh6 OS=Gallus gallus OX=9031 GN=MSH6 PE=3 SV=2	[more]
P54276	5.3e-151	33.31	DNA mismatch repair protein Msh6 OS=Mus musculus OX=10090 GN=Msh6 PE=1 SV=3	[more]
P52701	4.0e-146	32.73	DNA mismatch repair protein Msh6 OS=Homo sapiens OX=9606 GN=MSH6 PE=1 SV=2	[more]
Q9VUM0	1.1e-122	30.87	Probable DNA mismatch repair protein Msh6 OS=Drosophila melanogaster OX=7227 GN=...	[more]

BLAST of Lsi02G024720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQZ5	0.0e+00	81.41	DNA mismatch repair protein OS=Cucumis melo OX=3656 GN=LOC103492760 PE=3 SV=1	[more]
A0A5A7TZD1	0.0e+00	81.27	DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A0A0KB78	0.0e+00	81.11	DNA mismatch repair protein OS=Cucumis sativus OX=3659 GN=Csa_7G407640 PE=3 SV=1	[more]
A0A5D3D2Q9	0.0e+00	79.72	DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1H7N2	0.0e+00	77.22	DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111461234 PE=3 S...	[more]

BLAST of Lsi02G024720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899670.1	0.0e+00	83.19	DNA mismatch repair protein MSH6 isoform X2 [Benincasa hispida]	[more]
XP_038899669.1	0.0e+00	83.07	DNA mismatch repair protein MSH6 isoform X1 [Benincasa hispida]	[more]
XP_008451484.1	0.0e+00	81.41	PREDICTED: DNA mismatch repair protein MSH6 [Cucumis melo]	[more]
KAA0046691.1	0.0e+00	81.27	DNA mismatch repair protein MSH6 [Cucumis melo var. makuwa]	[more]
XP_004136154.1	0.0e+00	81.11	DNA mismatch repair protein MSH6 [Cucumis sativus] >KGN45011.1 hypothetical prot...	[more]

BLAST of Lsi02G024720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02070.1	0.0e+00	54.75	MUTS homolog 6	[more]
AT4G02070.2	0.0e+00	54.61	MUTS homolog 6	[more]
AT3G24495.1	4.0e-93	29.16	MUTS homolog 7	[more]
AT4G25540.1	8.1e-54	25.43	homolog of DNA mismatch repair protein MSH3	[more]
AT3G18524.1	1.3e-35	23.73	MUTS homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002999	Tudor domain	SMART	SM00333	TUDOR_7	coord: 95..153 e-value: 5.7E-4 score: 29.2
IPR007696	DNA mismatch repair protein MutS, core	SMART	SM00533	DNAend	coord: 747..1124 e-value: 5.7E-51 score: 185.3
IPR007696	DNA mismatch repair protein MutS, core	PFAM	PF05192	MutS_III	coord: 733..1050 e-value: 2.0E-30 score: 113.1
IPR000432	DNA mismatch repair protein MutS, C-terminal	SMART	SM00534	mutATP5	coord: 1143..1425 e-value: 7.9E-84 score: 294.5
IPR000432	DNA mismatch repair protein MutS, C-terminal	PFAM	PF00488	MutS_V	coord: 1147..1217 e-value: 1.3E-26 score: 93.8 coord: 1283..1380 e-value: 4.5E-25 score: 88.8
IPR000432	DNA mismatch repair protein MutS, C-terminal	PROSITE	PS00486	DNA_MISMATCH_REPAIR_2	coord: 1289..1305
IPR007695	DNA mismatch repair protein MutS-like, N-terminal	PFAM	PF01624	MutS_I	coord: 386..519 e-value: 3.3E-17 score: 62.8
IPR036678	MutS, connector domain superfamily	GENE3D	3.30.420.110	MutS, connector domain	coord: 528..724 e-value: 1.5E-49 score: 170.4
IPR036678	MutS, connector domain superfamily	SUPERFAMILY	53150	DNA repair protein MutS, domain II	coord: 526..742
None	No IPR available	GENE3D	1.10.1420.10		coord: 727..1050 e-value: 1.6E-89 score: 302.6
None	No IPR available	GENE3D	2.30.30.140		coord: 90..144 e-value: 3.1E-9 score: 38.3
None	No IPR available	GENE3D	1.10.1420.10		coord: 889..1035 e-value: 1.6E-89 score: 302.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..218
None	No IPR available	PANTHER	PTHR11361:SF34	DNA MISMATCH REPAIR PROTEIN MSH6	coord: 1066..1217 coord: 254..362
None	No IPR available	PANTHER	PTHR11361:SF34	DNA MISMATCH REPAIR PROTEIN MSH6	coord: 1282..1379 coord: 389..1050
None	No IPR available	SUPERFAMILY	63748	Tudor/PWWP/MBT	coord: 97..140
IPR007861	DNA mismatch repair protein MutS, clamp	PFAM	PF05190	MutS_IV	coord: 917..1017 e-value: 6.5E-10 score: 39.2
IPR007860	DNA mismatch repair protein MutS, connector domain	PFAM	PF05188	MutS_II	coord: 529..615 e-value: 6.4E-8 score: 33.0
IPR016151	DNA mismatch repair protein MutS, N-terminal	GENE3D	3.40.1170.10	DNA repair protein MutS, domain I	coord: 298..522 e-value: 3.1E-44 score: 152.8
IPR016151	DNA mismatch repair protein MutS, N-terminal	SUPERFAMILY	55271	DNA repair protein MutS, domain I	coord: 377..515
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1095..1453 e-value: 2.7E-77 score: 261.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1279..1380
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1109..1235
IPR017261	DNA mismatch repair protein MutS/MSH	PIRSF	PIRSF037677	Msh6	coord: 1059..1223 e-value: 7.1E-60 score: 200.9 coord: 1405..1477 e-value: 1.1 score: 4.9 coord: 1274..1381 e-value: 9.2E-47 score: 157.5 coord: 383..1051 e-value: 1.6E-168 score: 560.9 coord: 1..364 e-value: 3.8E-33 score: 112.4
IPR045076	DNA mismatch repair MutS family	PANTHER	PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	coord: 254..362
IPR045076	DNA mismatch repair MutS family	PANTHER	PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	coord: 1282..1379 coord: 389..1050
IPR045076	DNA mismatch repair MutS family	PANTHER	PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	coord: 1066..1217
IPR036187	DNA mismatch repair protein MutS, core domain superfamily	SUPERFAMILY	48334	DNA repair protein MutS, domain III	coord: 730..1050

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G024720.1	Lsi02G024720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0036297	interstrand cross-link repair
biological_process	GO:0043570	maintenance of DNA repeat elements
biological_process	GO:0000710	meiotic mismatch repair
biological_process	GO:0045910	negative regulation of DNA recombination
biological_process	GO:0006290	pyrimidine dimer repair
biological_process	GO:0006298	mismatch repair
cellular_component	GO:0032301	MutSalpha complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0032405	MutLalpha complex binding
molecular_function	GO:0032357	oxidized purine DNA binding
molecular_function	GO:0032143	single thymine insertion binding
molecular_function	GO:0030983	mismatched DNA binding