Lsi02G024460 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGCGTTTCAGTGAGCGTTTACAATGGCCTGAAGCGCTATTTGAGGAAAAAAAGCTACCGGAAACTGGCTGGGTCGGTGGGCCGTAGGACGGACACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGCCTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGAGATTCGTATGTTAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCACTACCGGCGGCGGCGGCGATGGGATCTGGGGCAGCGCCGGAAGAAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAATCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA ATGGAAGGCGTTTCAGTGAGCGTTTACAATGGCCTGAAGCGCTATTTGAGGAAAAAAAGCTACCGGAAACTGGCTGGGTCGGTGGGCCGTAGGACGGACACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGCCTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGAGATTCGTATGTTAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCACTACCGGCGGCGGCGGCGATGGGATCTGGGGCAGCGCCGGAAGAAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAATCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA ATGGAAGGCGTTTCAGTGAGCGTTTACAATGGCCTGAAGCGCTATTTGAGGAAAAAAAGCTACCGGAAACTGGCTGGGTCGGTGGGCCGTAGGACGGACACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGCCTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGAGATTCGTATGTTAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCACTACCGGCGGCGGCGGCGATGGGATCTGGGGCAGCGCCGGAAGAAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAATCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRLFRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMITEIYKSLVVAQGRLPPPESVRPSWVGGRLPTVAE Homology
BLAST of Lsi02G024460 vs. ExPASy TrEMBL
Match: A0A0A0K7Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405950 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70 Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Lsi02G024460 vs. ExPASy TrEMBL
Match: A0A5A7TZB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001450 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69 Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of Lsi02G024460 vs. ExPASy TrEMBL
Match: A0A1S4DZ96 (uncharacterized protein LOC103492779 OS=Cucumis melo OX=3656 GN=LOC103492779 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 7.9e-69 Identity = 138/154 (89.61%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of Lsi02G024460 vs. ExPASy TrEMBL
Match: A0A6J1GPC4 (uncharacterized protein LOC111456226 OS=Cucurbita moschata OX=3662 GN=LOC111456226 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62 Identity = 135/155 (87.10%), Postives = 139/155 (89.68%), Query Frame = 0
BLAST of Lsi02G024460 vs. ExPASy TrEMBL
Match: A0A6J1JLB7 (uncharacterized protein LOC111487968 OS=Cucurbita maxima OX=3661 GN=LOC111487968 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 4.2e-62 Identity = 134/155 (86.45%), Postives = 139/155 (89.68%), Query Frame = 0
BLAST of Lsi02G024460 vs. NCBI nr
Match: XP_038897064.1 (uncharacterized protein LOC120085238 isoform X1 [Benincasa hispida]) HSP 1 Score: 282.0 bits (720), Expect = 3.2e-72 Identity = 142/153 (92.81%), Postives = 148/153 (96.73%), Query Frame = 0
BLAST of Lsi02G024460 vs. NCBI nr
Match: XP_038897065.1 (uncharacterized protein LOC120085238 isoform X2 [Benincasa hispida]) HSP 1 Score: 282.0 bits (720), Expect = 3.2e-72 Identity = 142/153 (92.81%), Postives = 148/153 (96.73%), Query Frame = 0
BLAST of Lsi02G024460 vs. NCBI nr
Match: XP_031744261.1 (uncharacterized protein LOC101203703 [Cucumis sativus] >KGN44989.1 hypothetical protein Csa_016672 [Cucumis sativus]) HSP 1 Score: 275.4 bits (703), Expect = 3.0e-70 Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Lsi02G024460 vs. NCBI nr
Match: KAA0046671.1 (uncharacterized protein E6C27_scaffold427G00380 [Cucumis melo var. makuwa] >TYK18206.1 uncharacterized protein E5676_scaffold411G001450 [Cucumis melo var. makuwa]) HSP 1 Score: 271.6 bits (693), Expect = 4.3e-69 Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of Lsi02G024460 vs. NCBI nr
Match: XP_016901040.1 (PREDICTED: uncharacterized protein LOC103492779 [Cucumis melo]) HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68 Identity = 138/154 (89.61%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of Lsi02G024460 vs. TAIR 10
Match: AT3G62650.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 94.7 bits (234), Expect = 6.7e-20 Identity = 62/126 (49.21%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of Lsi02G024460 vs. TAIR 10
Match: AT3G62650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.7 bits (234), Expect = 6.7e-20 Identity = 62/126 (49.21%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of Lsi02G024460 vs. TAIR 10
Match: AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 94.4 bits (233), Expect = 8.7e-20 Identity = 59/130 (45.38%), Postives = 76/130 (58.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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