Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAAGGTTTTAAGCTTTTTCACACCTTGTTGTTAGTGTTTGCTTGGCATTGTTGTGTGAAGGTTGATGCCACTTTCAATGATGTCACCGGCATATTCGGTCGCGGCTTCAACCATCGTTGCTTTTCCTTCCGTCATACATTTGGATCAAGTGGTATCACTATGCATTCCAACACCCGTGGTAGCAGCGCGTCGAGTGCCATAGACATCGAGAGTCGTGCACCAACCCCAACACCAACACCTAAGATTGTCCCTGTTGGACTCGAAACTGATTCGATAATAAACATGCGTGAGATGGATGCTTTTGTTTCTAAAGATCATGATATTCATTGGAAGAGTGGTGGTGATATTGCTCTTTCTCATGGTGGAATAATTAGTCGAAAGGTCAAAAGTGGTAATATTGGTGTAAAGAGCAATAACAATATTGTTGTTTCTCATGGTCTTCAAACTACAATGAGTAGACATAACAAAGCTTTGTCTTTTGGTGTAGAAATAAGGAAGCACCAAAAGTCGGTGGTTTGA
mRNA sequence
ATGGATAAAGGTTTTAAGCTTTTTCACACCTTGTTGTTAGTGTTTGCTTGGCATTGTTGTGTGAAGGTTGATGCCACTTTCAATGATGTCACCGGCATATTCGGTCGCGGCTTCAACCATCGTTGCTTTTCCTTCCGTCATACATTTGGATCAAGTGGTATCACTATGCATTCCAACACCCGTGGTAGCAGCGCGTCGAGTGCCATAGACATCGAGAGTCGTGCACCAACCCCAACACCAACACCTAAGATTGTCCCTGTTGGACTCGAAACTGATTCGATAATAAACATGCGTGAGATGGATGCTTTTGTTTCTAAAGATCATGATATTCATTGGAAGAGTGGTGGTGATATTGCTCTTTCTCATGGTGGAATAATTAGTCGAAAGGTCAAAAGTGGTAATATTGGTGTAAAGAGCAATAACAATATTGTTGTTTCTCATGGTCTTCAAACTACAATGAGTAGACATAACAAAGCTTTGTCTTTTGGTGTAGAAATAAGGAAGCACCAAAAGTCGGTGGTTTGA
Coding sequence (CDS)
ATGGATAAAGGTTTTAAGCTTTTTCACACCTTGTTGTTAGTGTTTGCTTGGCATTGTTGTGTGAAGGTTGATGCCACTTTCAATGATGTCACCGGCATATTCGGTCGCGGCTTCAACCATCGTTGCTTTTCCTTCCGTCATACATTTGGATCAAGTGGTATCACTATGCATTCCAACACCCGTGGTAGCAGCGCGTCGAGTGCCATAGACATCGAGAGTCGTGCACCAACCCCAACACCAACACCTAAGATTGTCCCTGTTGGACTCGAAACTGATTCGATAATAAACATGCGTGAGATGGATGCTTTTGTTTCTAAAGATCATGATATTCATTGGAAGAGTGGTGGTGATATTGCTCTTTCTCATGGTGGAATAATTAGTCGAAAGGTCAAAAGTGGTAATATTGGTGTAAAGAGCAATAACAATATTGTTGTTTCTCATGGTCTTCAAACTACAATGAGTAGACATAACAAAGCTTTGTCTTTTGGTGTAGAAATAAGGAAGCACCAAAAGTCGGTGGTTTGA
Protein sequence
MDKGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRGSSASSAIDIESRAPTPTPTPKIVPVGLETDSIINMREMDAFVSKDHDIHWKSGGDIALSHGGIISRKVKSGNIGVKSNNNIVVSHGLQTTMSRHNKALSFGVEIRKHQKSVV
Homology
BLAST of Lsi02G024290 vs. ExPASy TrEMBL
Match:
A0A5A7U0F0 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001080 PE=4 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 1.4e-45
Identity = 107/169 (63.31%), Postives = 127/169 (75.15%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
+GFKLFH L LV A CCVKV ATF+DVTGI G G +HR +SFR+T GSSG+ M SNT G
Sbjct: 5 QGFKLFHILFLVLACLCCVKVGATFHDVTGILGLGISHR-YSFRNTIGSSGVGMFSNTGG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S+ SS +D ES PT PTP I P GLET+ +I N + AFVSKDHDIHWKSG +IALS
Sbjct: 65 STTSSVVDTES--PTQAPTPDIAPAGLETNPAIKNSHDFMAFVSKDHDIHWKSGRNIALS 124
Query: 123 HGGIISRKVKSGNIGVKSNN-NIVVSHGLQTTMSRHNKALSFGVEIRKH 170
GGI++ G IGVKSNN N VSHGL+T++SR+NKALSFG+EI K+
Sbjct: 125 RGGIVT---NGGKIGVKSNNSNFAVSHGLETSLSRNNKALSFGIEIEKN 167
BLAST of Lsi02G024290 vs. ExPASy TrEMBL
Match:
A0A5D3D2N3 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001220 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 2.0e-44
Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
+GFKLFHTL L+F+W CCVKV ATF+DVTGI G G NHR +SF H FGSSG+ M SNT G
Sbjct: 5 QGFKLFHTLFLLFSWQCCVKVGATFHDVTGILGLGINHR-YSF-HAFGSSGVGMFSNTVG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S ASS +DIES P PT +IVP G E D + N + +AF+SKDHDIHWKSG IA
Sbjct: 65 SRASSVVDIES--PAQAPTSEIVPAGPEIDLATKNSHDFEAFISKDHDIHWKSGSSIA-P 124
Query: 123 HGGIISRKVKSGNIGVKSNNNIVVSHGLQTTMSRHNKALSFGVEIRKH 170
HGG++S G IGVKSN+N VSHGL+T+ SR+NKALSFG+EI K+
Sbjct: 125 HGGVVS---SGGKIGVKSNSNFAVSHGLETS-SRNNKALSFGIEIEKN 163
BLAST of Lsi02G024290 vs. ExPASy TrEMBL
Match:
A0A5D3D3W7 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001240 PE=4 SV=1)
HSP 1 Score: 187.6 bits (475), Expect = 4.5e-44
Identity = 106/168 (63.10%), Postives = 124/168 (73.81%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
KG KLFHTLLLV CCVKV ATF+DVTGI G G N R +SF +T GSSG+ M SNT G
Sbjct: 5 KGIKLFHTLLLVLVCLCCVKVGATFHDVTGILGLGIN-RHYSFHNTIGSSGVGMFSNTGG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S+ SS +DIES PT PT +I P GLET+ +I N AFVSKDHDIHWKSG +IALS
Sbjct: 65 STTSSVVDIES--PTQAPTAEIAPAGLETNPAIKNSHHFVAFVSKDHDIHWKSGSNIALS 124
Query: 123 HGGIISRKVKSGNIGVKSNNNIVVSHGLQTTMSRHNKALSFGVEIRKH 170
GG++S G IGVKSN+N VSHGL+T+ SR+NKALSFG+EI K+
Sbjct: 125 RGGVVS---SGGEIGVKSNSNFAVSHGLETS-SRNNKALSFGIEIEKN 165
BLAST of Lsi02G024290 vs. ExPASy TrEMBL
Match:
A0A5A7TZJ9 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold427G00120 PE=4 SV=1)
HSP 1 Score: 187.6 bits (475), Expect = 4.5e-44
Identity = 104/168 (61.90%), Postives = 125/168 (74.40%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
+GFKLFHTL L+F+W CCVKV ATF+DVTGI G G NHR +SF H FGSSG+ M SNT G
Sbjct: 5 QGFKLFHTLFLLFSWQCCVKVGATFHDVTGILGLGINHR-YSF-HAFGSSGVGMFSNTVG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S ASS +DIE+ P PT +IVP G E D + N + +AF+SKDHDIHWKSG IA
Sbjct: 65 SRASSVVDIET--PAQAPTSEIVPAGPEIDLATKNSHDFEAFISKDHDIHWKSGSSIA-P 124
Query: 123 HGGIISRKVKSGNIGVKSNNNIVVSHGLQTTMSRHNKALSFGVEIRKH 170
HGG++S G IGVKSN+N VSHGL+T+ SR+NKALSFG+EI K+
Sbjct: 125 HGGVVS---SGGKIGVKSNSNFAVSHGLETS-SRNNKALSFGIEIEKN 163
BLAST of Lsi02G024290 vs. ExPASy TrEMBL
Match:
A0A0A0KB06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404790 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 6.5e-43
Identity = 102/168 (60.71%), Postives = 122/168 (72.62%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
+GF LFHTL LV A CCV V ATF+DVTGI G G +HR +SF +T GS G+ + SNT G
Sbjct: 5 QGFNLFHTLFLVLACLCCVNVGATFHDVTGILGLGIHHR-YSFHNTIGSGGVGLFSNTGG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S+ASS +DIES P PT +I P GLETD +I N + + F+SKDHDIHWKSG +IALS
Sbjct: 65 STASSVVDIES--PAQAPTSEIAPAGLETDPAINNSHDFEGFISKDHDIHWKSGSNIALS 124
Query: 123 HGGIISRKVKSGNIGVKSNNNIVVSHGLQT-TMSRHNKALSFGVEIRK 169
HGG+IS G IGVKS +N VSHGLQT + SR+NKALS G+EI K
Sbjct: 125 HGGVIS---TGGKIGVKSYSNFAVSHGLQTSSSSRNNKALSSGIEIEK 166
BLAST of Lsi02G024290 vs. NCBI nr
Match:
KAA0048678.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18176.1 Ankyrin repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 192.6 bits (488), Expect = 2.9e-45
Identity = 107/169 (63.31%), Postives = 127/169 (75.15%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
+GFKLFH L LV A CCVKV ATF+DVTGI G G +HR +SFR+T GSSG+ M SNT G
Sbjct: 5 QGFKLFHILFLVLACLCCVKVGATFHDVTGILGLGISHR-YSFRNTIGSSGVGMFSNTGG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S+ SS +D ES PT PTP I P GLET+ +I N + AFVSKDHDIHWKSG +IALS
Sbjct: 65 STTSSVVDTES--PTQAPTPDIAPAGLETNPAIKNSHDFMAFVSKDHDIHWKSGRNIALS 124
Query: 123 HGGIISRKVKSGNIGVKSNN-NIVVSHGLQTTMSRHNKALSFGVEIRKH 170
GGI++ G IGVKSNN N VSHGL+T++SR+NKALSFG+EI K+
Sbjct: 125 RGGIVT---NGGKIGVKSNNSNFAVSHGLETSLSRNNKALSFGIEIEKN 167
BLAST of Lsi02G024290 vs. NCBI nr
Match:
TYK18187.1 (Ankyrin repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 188.7 bits (478), Expect = 4.1e-44
Identity = 105/168 (62.50%), Postives = 125/168 (74.40%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
+GFKLFHTL L+F+W CCVKV ATF+DVTGI G G NHR +SF H FGSSG+ M SNT G
Sbjct: 5 QGFKLFHTLFLLFSWQCCVKVGATFHDVTGILGLGINHR-YSF-HAFGSSGVGMFSNTVG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S ASS +DIES P PT +IVP G E D + N + +AF+SKDHDIHWKSG IA
Sbjct: 65 SRASSVVDIES--PAQAPTSEIVPAGPEIDLATKNSHDFEAFISKDHDIHWKSGSSIA-P 124
Query: 123 HGGIISRKVKSGNIGVKSNNNIVVSHGLQTTMSRHNKALSFGVEIRKH 170
HGG++S G IGVKSN+N VSHGL+T+ SR+NKALSFG+EI K+
Sbjct: 125 HGGVVS---SGGKIGVKSNSNFAVSHGLETS-SRNNKALSFGIEIEKN 163
BLAST of Lsi02G024290 vs. NCBI nr
Match:
KAA0046649.1 (Ankyrin repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 187.6 bits (475), Expect = 9.2e-44
Identity = 104/168 (61.90%), Postives = 125/168 (74.40%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
+GFKLFHTL L+F+W CCVKV ATF+DVTGI G G NHR +SF H FGSSG+ M SNT G
Sbjct: 5 QGFKLFHTLFLLFSWQCCVKVGATFHDVTGILGLGINHR-YSF-HAFGSSGVGMFSNTVG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S ASS +DIE+ P PT +IVP G E D + N + +AF+SKDHDIHWKSG IA
Sbjct: 65 SRASSVVDIET--PAQAPTSEIVPAGPEIDLATKNSHDFEAFISKDHDIHWKSGSSIA-P 124
Query: 123 HGGIISRKVKSGNIGVKSNNNIVVSHGLQTTMSRHNKALSFGVEIRKH 170
HGG++S G IGVKSN+N VSHGL+T+ SR+NKALSFG+EI K+
Sbjct: 125 HGGVVS---SGGKIGVKSNSNFAVSHGLETS-SRNNKALSFGIEIEKN 163
BLAST of Lsi02G024290 vs. NCBI nr
Match:
TYK18189.1 (Ankyrin repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 187.6 bits (475), Expect = 9.2e-44
Identity = 106/168 (63.10%), Postives = 124/168 (73.81%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
KG KLFHTLLLV CCVKV ATF+DVTGI G G N R +SF +T GSSG+ M SNT G
Sbjct: 5 KGIKLFHTLLLVLVCLCCVKVGATFHDVTGILGLGIN-RHYSFHNTIGSSGVGMFSNTGG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S+ SS +DIES PT PT +I P GLET+ +I N AFVSKDHDIHWKSG +IALS
Sbjct: 65 STTSSVVDIES--PTQAPTAEIAPAGLETNPAIKNSHHFVAFVSKDHDIHWKSGSNIALS 124
Query: 123 HGGIISRKVKSGNIGVKSNNNIVVSHGLQTTMSRHNKALSFGVEIRKH 170
GG++S G IGVKSN+N VSHGL+T+ SR+NKALSFG+EI K+
Sbjct: 125 RGGVVS---SGGEIGVKSNSNFAVSHGLETS-SRNNKALSFGIEIEKN 165
BLAST of Lsi02G024290 vs. NCBI nr
Match:
KAA0046651.1 (Ankyrin repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 183.0 bits (463), Expect = 2.3e-42
Identity = 104/168 (61.90%), Postives = 122/168 (72.62%), Query Frame = 0
Query: 3 KGFKLFHTLLLVFAWHCCVKVDATFNDVTGIFGRGFNHRCFSFRHTFGSSGITMHSNTRG 62
KG KLFHTLLLV CCVKV ATF+DVTGI G G N R +SF +T GSSG+ M SNT G
Sbjct: 5 KGIKLFHTLLLVLVCLCCVKVGATFHDVTGILGLGIN-RHYSFHNTIGSSGVGMFSNTGG 64
Query: 63 SSASSAIDIESRAPTPTPTPKIVPVGLETD-SIINMREMDAFVSKDHDIHWKSGGDIALS 122
S+ SS +DIES PT PT +I P GLET+ +I N AFVSKDHDIHWKSG +I LS
Sbjct: 65 STTSSVVDIES--PTQAPTAEIAPAGLETNPAIKNSHHFVAFVSKDHDIHWKSGSNIVLS 124
Query: 123 HGGIISRKVKSGNIGVKSNNNIVVSHGLQTTMSRHNKALSFGVEIRKH 170
GG++S G IGVKSN+N VS GL+T+ SR+NKALSFG+EI K+
Sbjct: 125 RGGVVS---SGGEIGVKSNSNFAVSRGLETS-SRNNKALSFGIEIEKN 165
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7U0F0 | 1.4e-45 | 63.31 | Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4... | [more] |
| A0A5D3D2N3 | 2.0e-44 | 62.50 | Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4... | [more] |
| A0A5D3D3W7 | 4.5e-44 | 63.10 | Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4... | [more] |
| A0A5A7TZJ9 | 4.5e-44 | 61.90 | Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4... | [more] |
| A0A0A0KB06 | 6.5e-43 | 60.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404790 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0048678.1 | 2.9e-45 | 63.31 | Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18176.1 Ankyrin repeat pro... | [more] |
| TYK18187.1 | 4.1e-44 | 62.50 | Ankyrin repeat protein [Cucumis melo var. makuwa] | [more] |
| KAA0046649.1 | 9.2e-44 | 61.90 | Ankyrin repeat protein [Cucumis melo var. makuwa] | [more] |
| TYK18189.1 | 9.2e-44 | 63.10 | Ankyrin repeat protein [Cucumis melo var. makuwa] | [more] |
| KAA0046651.1 | 2.3e-42 | 61.90 | Ankyrin repeat protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
