Lsi02G024190 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G024190
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Exopolygalacturonase-like
Location	chr02: 30798602 .. 30801115 (-)
RNA-Seq Expression	Lsi02G024190
Synteny	Lsi02G024190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTGCTTGGCAATGCTGTGCAAAGGTTGCTGCCATTTTCAACGACGTCACCGGCGCTGAAAATCTCGTCGATGGGATCATATCAATGGTAAATGATCAGCAGCTTCTTCGTCCTGCAGCAGCACCACGACCTCTTGGTATCGGAACTCTTCCGGACATCGGCAGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGAAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGTGATGGAAAGACTGATGATGCACAGGTGAGAGAAATATCAATCCAAAACTTCAAATTTTTAATTTGAGTAAATTATCTTTAAACTTGTCAAATTATTTAAATTTGAGCCATTATTCTCTAACTACAGCCTGCCTAATAATTAGCTTGTTGTAGCTCTATCAGCAATTGGGGTTTAATTATTTACAATCATTTTAAAATAATATTTAGATGTATTTTAGATTGTAACTATCTTTTTTTTTGTTTTATCTCGATTATTTAAAAATATTTAAGAAAAAATTTATCCCATGACAAACTATGATTGTGGTTCGACCGCTGAGTTGGTAAAAAAAATTAGCTAAGCATGCAAGTTTTTTTTTCATCATTTTGTAAGGTTGTTCATCATTTTGTAAGGTTGCGAACCAATAAAATTGCAGCAATTTTAAGGGTCTCATTTTAACCATATCTGTGTTTTTCAAAGATTTTAATTAGTATCAACTTCAGAAATGGTTTGTGCATTAATAACAAACAATAATTTTTTTTTCTTTTAAGATTCGAAGAGGAAAGTACTAATTATGAATATTTTAGAATGTAGATTGTTAAGATTGCATTATTGAACTTTTGATTTGAATAATTACACCAATCACAAAGTCATTTTTAGATATTAAATTCTACCATTATATAAATCTGAATCAAACACAAAAATAATAATAATTATTATTATTATTGAATATGGTATAACTGTTTAATACATTTTTCCACCTTCTCTGACCAAAAATAATAATATATTGATTTTCCACGTGGCAGGCATTCATGACAACATGGATTGCAGCCTGTCGGAACACAGTAGGTCCAGCGAAGTTTTTGATCCCACAAGGCACATTTTTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCAATCACCTTGGAAAATCAAGGAACTGTAAAGGCCACAACCGATATCTCTGAATATTCTTCTCCAGAATGGTTTTCCATTGAATCTATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGATGGCCAAGGCTTTGCCGCTTGGCCTTACAATGACTGCAAGAAAAACAAATTCTGCCAGATTCTTCCTATCGTAATTATAATTCTCTATTTCTCAATCAATTTCTATTTAATTATATAAACTTCGTGTTAAAAAAAAAAGAAAAAAAAAGACTTGAAACTACTAGAATTGTGTCTAATACACACCTGAACTTAAAAATAAATAGTGTAGGGACTAAACTTAATTGTAGTTCAACTTAATATTGTAATTGTGATTGATTAATTGTTCTCTTTTTTTTTTTTGTAGTCAATTAAATTCTCAAAATTGAACCACACGATTGTTGATGGGCTCACTTCACTGAATAGCAAGGGTTTTCACACGTCTGTATTCTATTGCCACAATTTCACTGCTACTAACATGAACATTATAGCTCCAGGAAATAGTCCCAACACTGATGGAATGCACCTTAGCACCTCAAAATTGATCACCATTACTAACAGCGTCATCGGCACCGGTGATGACTGTGTCTCCATTGGCCATACTTGTGAGAAAGTCACTGTCACCAATGTCACTTGCGGCCCAGGACATGGCCTCAGGTAATTATAGTATGCATTTTTAAAAAAGTTTAAATTAAAGATTAAATAGACACAATAAAAAAAAAATGATCTCAAAGCTCTTTATTCTCCTTCAGCGTGGGTAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCTCTGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCTACCAATGGTGCTAGAATCAAGACATGGGCTAGCCCTGTGGCGGGGTTAGCTTCGGGAATAATCTTCGAAGACATTGTAATGTACAACGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAAGGGAACAAGAAGGTAACAATAACAACAACGACAAAAACAAATTAACCATTATTAATACTTATGAGTTTAAGCTTTTGAGTTAAGTAGTGGTTTTAAAAATGCTACAACGACTAATACTCCATGCAGGCTTCAAAGTGGAAGATCAGTGACGTTCACTTCAAGAACATTCGTGGGACATCCACGACGAACGTGGCGGTGTTGTTGGAGTGCAGCGAGTTGCTTCCATGTGAGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGGGGCACCGACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGATTACTACTTTTGGGGTGCAGAATCCGCCAGCTTGTGTTGTA

mRNA sequence

TATTTGCTTGGCAATGCTGTGCAAAGGTTGCTGCCATTTTCAACGACGTCACCGGCGCTGAAAATCTCGTCGATGGGATCATATCAATGGTAAATGATCAGCAGCTTCTTCGTCCTGCAGCAGCACCACGACCTCTTGGTATCGGAACTCTTCCGGACATCGGCAGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGAAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGTGATGGAAAGACTGATGATGCACAGGCATTCATGACAACATGGATTGCAGCCTGTCGGAACACAGTAGGTCCAGCGAAGTTTTTGATCCCACAAGGCACATTTTTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCAATCACCTTGGAAAATCAAGGAACTGTAAAGGCCACAACCGATATCTCTGAATATTCTTCTCCAGAATGGTTTTCCATTGAATCTATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGATGGCCAAGGCTTTGCCGCTTGGCCTTACAATGACTGCAAGAAAAACAAATTCTGCCAGATTCTTCCTATCTCAATTAAATTCTCAAAATTGAACCACACGATTGTTGATGGGCTCACTTCACTGAATAGCAAGGGTTTTCACACGTCTGTATTCTATTGCCACAATTTCACTGCTACTAACATGAACATTATAGCTCCAGGAAATAGTCCCAACACTGATGGAATGCACCTTAGCACCTCAAAATTGATCACCATTACTAACAGCGTCATCGGCACCGGTGATGACTGTGTCTCCATTGGCCATACTTGTGAGAAAGTCACTGTCACCAATGTCACTTGCGGCCCAGGACATGGCCTCAGCGTGGGTAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCTCTGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCTACCAATGGTGCTAGAATCAAGACATGGGCTAGCCCTGTGGCGGGGTTAGCTTCGGGAATAATCTTCGAAGACATTGTAATGTACAACGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAAGGGAACAAGAAGGCTTCAAAGTGGAAGATCAGTGACGTTCACTTCAAGAACATTCGTGGGACATCCACGACGAACGTGGCGGTGTTGTTGGAGTGCAGCGAGTTGCTTCCATGTGAGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGGGGCACCGACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGATTACTACTTTTGGGGTGCAGAATCCGCCAGCTTGTGTTGTA

Coding sequence (CDS)

ATGGTAAATGATCAGCAGCTTCTTCGTCCTGCAGCAGCACCACGACCTCTTGGTATCGGAACTCTTCCGGACATCGGCAGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGAAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGTGATGGAAAGACTGATGATGCACAGGCATTCATGACAACATGGATTGCAGCCTGTCGGAACACAGTAGGTCCAGCGAAGTTTTTGATCCCACAAGGCACATTTTTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCAATCACCTTGGAAAATCAAGGAACTGTAAAGGCCACAACCGATATCTCTGAATATTCTTCTCCAGAATGGTTTTCCATTGAATCTATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGATGGCCAAGGCTTTGCCGCTTGGCCTTACAATGACTGCAAGAAAAACAAATTCTGCCAGATTCTTCCTATCTCAATTAAATTCTCAAAATTGAACCACACGATTGTTGATGGGCTCACTTCACTGAATAGCAAGGGTTTTCACACGTCTGTATTCTATTGCCACAATTTCACTGCTACTAACATGAACATTATAGCTCCAGGAAATAGTCCCAACACTGATGGAATGCACCTTAGCACCTCAAAATTGATCACCATTACTAACAGCGTCATCGGCACCGGTGATGACTGTGTCTCCATTGGCCATACTTGTGAGAAAGTCACTGTCACCAATGTCACTTGCGGCCCAGGACATGGCCTCAGCGTGGGTAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCTCTGACGTTCTAGTAAAGAACTGCACCATTTTCAATGCTACCAATGGTGCTAGAATCAAGACATGGGCTAGCCCTGTGGCGGGGTTAGCTTCGGGAATAATCTTCGAAGACATTGTAATGTACAACGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAAGGGAACAAGAAGGCTTCAAAGTGGAAGATCAGTGACGTTCACTTCAAGAACATTCGTGGGACATCCACGACGAACGTGGCGGTGTTGTTGGAGTGCAGCGAGTTGCTTCCATGTGAGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGGGGCACCGACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGATTACTACTTTTGGGGTGCAGAATCCGCCAGCTTGTGTTGTA

Protein sequence

MVNDQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASPVAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV

Homology

[Close]

BLAST of Lsi02G024190 vs. ExPASy Swiss-Prot
Match: P49062 (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.5e-92
Identity = 177/382 (46.34%), Postives = 237/382 (62.04%), Query Frame = 0


Query: 39  NGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAG 98
           N     V+D+TK GA GDG T+  +AF+ TWI  C + V PA  L+P+GTFL GPV FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAG 104

Query: 99  PCKSFPITLENQGTVKATTDISEYSSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCK 158
           PCKS  +T+   GT+ ATT  S Y++PEWF  E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKS-KVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 159 KNKFCQILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTD 218
           K   C + P S+KF  + +  ++G++S+N+K FH  +    N    N+ + AP  SPNTD
Sbjct: 165 KKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTD 224

Query: 219 GMHLSTSKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGV 278
           G+HLS +  ++I +S I TGDDCVS+G     VTV  V CGPGHGLSVGSLGKY  E+ V
Sbjct: 225 GIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDV 284

Query: 279 SDVLVKNCTIFNATNGARIKTWASPVAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKK 338
           S + V NCT+    NG RIKTW       A  I FE+I+M +VKNPIIIDQ YG++G   
Sbjct: 285 SGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGD- 344

Query: 339 ASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTY----GGTDLRNT-- 398
            S+  ISD+ FKNIRGT+ T   V + CS+ +PC+GV + D+NL Y    GG    ++  
Sbjct: 345 -SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGKTGGEKKSSSGG 404

Query: 399 TILSSCMNAKITTFGVQNPPAC 415
            + + C NA +   G  + P C
Sbjct: 405 LVGALCDNANVIFGGKLSFPMC 420

[Close]

BLAST of Lsi02G024190 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 2.1e-89
Identity = 168/374 (44.92%), Postives = 232/374 (62.03%), Query Frame = 0


Query: 41  NGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPC 100
           + G+VF+V  +GAKG G  D +QA M  W AAC +  GP+  LIP+G + +G V   GPC
Sbjct: 5   SSGSVFNVNDYGAKGAG--DISQAVMKAWKAACASQ-GPSTVLIPKGNYNMGEVAMQGPC 64

Query: 101 KSFPITLENQGTVKATTDISEYSSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKN 160
           K   I  +  G VKA  D S++ S  W S   I G  ++G+G  DGQG  AW  N+C KN
Sbjct: 65  KGSKIGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKN 124

Query: 161 KFCQILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGM 220
             C+   ++++F  L H +V  +TSLNSK FH +V  C + T  ++ + APG S NTDG+
Sbjct: 125 PNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGI 184

Query: 221 HLSTSKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSD 280
           H+  SK +TITN+ I TGDDC+SIG   + VT+T V CGPGHG+S+GSLG+Y  EK V  
Sbjct: 185 HVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRG 244

Query: 281 VLVKNCTIFNATNGARIKTWASPVAGLASGIIFEDIVMYNVKNPIIIDQ---TYGTKGNK 340
           + VK CT     NG R+KTW +   G A+ + F+D+ M NV+NP+I+DQ    YG    +
Sbjct: 245 ITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQ 304

Query: 341 KASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTDLRNTTILSS 400
             S+ K+S+++F NIRGTST  VAV++ CS  +PC  +++ +INL+Y G     T   S+
Sbjct: 305 APSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPAT---ST 364

Query: 401 CMNAKITTFGVQNP 412
           C N K T  G Q P
Sbjct: 365 CSNVKPTFSGKQVP 372

[Close]

BLAST of Lsi02G024190 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.1e-88
Identity = 170/373 (45.58%), Postives = 238/373 (63.81%), Query Frame = 0


Query: 45  VFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFP 104
           VFD+TK+GA  +   D ++A +  +  AC++T  P+  +IP+GTF +  V   GPCKS P
Sbjct: 26  VFDITKYGA--NSNADISEALLNAFKEACQST-SPSTIVIPKGTFTMNQVKLEGPCKS-P 85

Query: 105 ITLENQGTVKATTDISEYSSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQ 164
           + L+ Q T+KA +D S+    EW ++  +  F ++G G+ DGQ  AAW   +CK++K C 
Sbjct: 86  LELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAW---ECKQSKKCN 145

Query: 165 ILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLST 224
            LP ++ F+ L ++ +  +T+L+SK FH +V  C N T    N+ AP NSPNTDG+H+S 
Sbjct: 146 KLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSR 205

Query: 225 SKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVK 284
           S  + IT+S   TGDDC+S+G   E++ +T VTCGPGHG+SVGSLG  P EK V  V V+
Sbjct: 206 SSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVR 265

Query: 285 NCTIFNATNGARIKTWASPVAGLASGIIFEDIVMYNVKNPIIIDQTY--GTKGNKK-ASK 344
           NCT  N  NG RIKTW +   G+ + + FEDI++ NV NP++IDQ Y    K NK   S+
Sbjct: 266 NCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQ 325

Query: 345 WKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNA 404
            KIS V F+NI+GTS T  AV L  S+ +PCEG+E+ DI++TY G   +     SSC N 
Sbjct: 326 VKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSG---KEGPAKSSCENI 385

Query: 405 KITTFGVQNPPAC 415
           K +  G QNPP C
Sbjct: 386 KPSLKGKQNPPVC 388

[Close]

BLAST of Lsi02G024190 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.3e-88
Identity = 179/390 (45.90%), Postives = 237/390 (60.77%), Query Frame = 0


Query: 30  NDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTF 89
           ND KA    +G GG+ FD+TK GA G+GKTD  +A    W +AC  T G    LIP+G F
Sbjct: 30  NDAKA----SGPGGS-FDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDF 89

Query: 90  LVGPVTFAGPCKSFPITLENQGTVKATTDISEYSS-PEWFSIESITGFILTGSGVFDGQG 149
           LVGP+ F GPCK   +T++  G + ATTD+S+Y     W  I  +   ++TG G  DGQG
Sbjct: 90  LVGPLNFTGPCKG-DVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQG 149

Query: 150 FAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNI 209
            A W  N C K   C+ILP S+    +N+  V G+T LNSK FH +++ C +    ++N+
Sbjct: 150 PAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNV 209

Query: 210 IAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGS 269
            APG+SPNTDG+H+  S  +TITN+VIG GDDC+SIG    KV +T VTCGPGHG+S+GS
Sbjct: 210 TAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGS 269

Query: 270 LGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASPVAGL-ASGIIFEDIVMYNVKNPIII 329
           LG+Y  EK V+D+ VK+CT+    NG RIK +    + L AS I +E+I M +   PIII
Sbjct: 270 LGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIII 329

Query: 330 DQTYGTK---GNKKASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTY 389
           D  Y          ASK  + DV FKNI GTS+T  AV L C+  +PC GV + D+N+ Y
Sbjct: 330 DMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKY 389

Query: 390 GGTDLRNTTILSSCMNAKITTFGVQNPPAC 415
            GT   N   ++ C NAK +  G     AC
Sbjct: 390 SGT---NNKTMAVCKNAKGSAKGCLKELAC 409

[Close]

BLAST of Lsi02G024190 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 3.7e-86
Identity = 165/371 (44.47%), Postives = 225/371 (60.65%), Query Frame = 0


Query: 48  VTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITL 107
           V K GAK DGKTD ++ F+  W  AC  +V P+  +IP+GT+L+  V   GPCK+ PI +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACA-SVTPSTVVIPKGTYLLSKVNLEGPCKA-PIEI 91

Query: 108 ENQGTVKATTDISEYSSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILP 167
             QGT++A  D S +  P W    S+  F + G G+FDGQG  A+  N C+  +F   LP
Sbjct: 92  NVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLP 151

Query: 168 ISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKL 227
           ++I+F  L + ++  +TS +SK FH +VF C N T   + I AP  SPNTDG+H+  S+ 
Sbjct: 152 VNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 211

Query: 228 ITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCT 287
           + I  S I TGDDC+SIG   + + +  +TCGPGHG+S+GSLGK+  E+ V  + + NCT
Sbjct: 212 VNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCT 271

Query: 288 IFNATNGARIKTWASPVAGLASGIIFEDIVMYNVKNPIIIDQTY----GTKGNKKASKWK 347
           I N +NGARIKTW     G  S I FEDI M NV +PI+IDQ Y      K N++ SK K
Sbjct: 272 ITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEE-SKVK 331

Query: 348 ISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKI 407
           +S++ FKNIRGTS    A+   CS   PC+ VEL DI++ + G +       S C+N K 
Sbjct: 332 LSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAE----PATSQCLNVKP 391

Query: 408 TTFGVQNPPAC 415
            T G  NP  C
Sbjct: 392 ITSGKLNPIPC 395

[Close]

BLAST of Lsi02G024190 vs. ExPASy TrEMBL
Match: A0A5A7U4W1 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00950 PE=3 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 2.6e-215
Identity = 366/413 (88.62%), Postives = 386/413 (93.46%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQ 63
           ++Q LRPA APR LGIGTLPDIGSTVNDI+AN+ LN NGG+VFDVTKHGAK DG+TDDAQ
Sbjct: 46  NEQFLRPAGAPRRLGIGTLPDIGSTVNDIRANIVLNENGGSVFDVTKHGAKADGETDDAQ 105

Query: 64  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 123
           AFMTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDISEYS
Sbjct: 106 AFMTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 165

Query: 124 SPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGL 183
           SPEWFSIE ITGFILTGSGVFDGQG   WPYNDCKKN+FCQ+LPISIKFS+LNHTIVDGL
Sbjct: 166 SPEWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGL 225

Query: 184 TSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVS 243
           TS+NS GFHTSVFYC+NFTATNM IIAP NSPNTDGMHLSTSKL+TITNSVIGTGDDCVS
Sbjct: 226 TSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVS 285

Query: 244 IGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASP 303
           IGH+ E + VTNVTCGPGHGLSVGSLGKY KEK V +VLVKNCTIFNATNGARIKTWAS 
Sbjct: 286 IGHSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASR 345

Query: 304 VAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVL 363
           ++GLASGIIFEDIVMYNVKNPIIIDQTYGTK  KK S WKISDVHFKNIRGTSTTNVAVL
Sbjct: 346 ISGLASGIIFEDIVMYNVKNPIIIDQTYGTK-KKKVSNWKISDVHFKNIRGTSTTNVAVL 405

Query: 364 LECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LECSELLPCEGVELRDINLTYGGT+LRNTTI+SSC NAKI TFGVQNPP CVV
Sbjct: 406 LECSELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of Lsi02G024190 vs. ExPASy TrEMBL
Match: A0A5A7TQ89 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36913G00010 PE=3 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 2.6e-215
Identity = 366/413 (88.62%), Postives = 386/413 (93.46%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQ 63
           ++Q LRPA APR LGIGTLPDIGSTVNDI+AN+ LN NGG+VFDVTKHGAK DG+TDDAQ
Sbjct: 46  NEQFLRPAGAPRRLGIGTLPDIGSTVNDIRANIVLNENGGSVFDVTKHGAKADGETDDAQ 105

Query: 64  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 123
           AFMTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDISEYS
Sbjct: 106 AFMTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 165

Query: 124 SPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGL 183
           SPEWFSIE ITGFILTGSGVFDGQG   WPYNDCKKN+FCQ+LPISIKFS+LNHTIVDGL
Sbjct: 166 SPEWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGL 225

Query: 184 TSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVS 243
           TS+NS GFHTSVFYC+NFTATNM IIAP NSPNTDGMHLSTSKL+TITNSVIGTGDDCVS
Sbjct: 226 TSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVS 285

Query: 244 IGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASP 303
           IGH+ E + VTNVTCGPGHGLSVGSLGKY KEK V +VLVKNCTIFNATNGARIKTWAS 
Sbjct: 286 IGHSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASR 345

Query: 304 VAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVL 363
           ++GLASGIIFEDIVMYNVKNPIIIDQTYGTK  KK S WKISDVHFKNIRGTSTTNVAVL
Sbjct: 346 ISGLASGIIFEDIVMYNVKNPIIIDQTYGTK-KKKVSNWKISDVHFKNIRGTSTTNVAVL 405

Query: 364 LECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LECSELLPCEGVELRDINLTYGGT+LRNTTI+SSC NAKI TFGVQNPP CVV
Sbjct: 406 LECSELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of Lsi02G024190 vs. ExPASy TrEMBL
Match: A0A0A0KMA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 2.0e-207
Identity = 354/413 (85.71%), Postives = 376/413 (91.04%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQ 63
           ++Q LRPA APR LG  TLPDIG TVNDI ANVDLN NGG+VFDVTKHGAK DGKTDDAQ
Sbjct: 14  NKQFLRPAEAPRHLGFNTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKADGKTDDAQ 73

Query: 64  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 123
           AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKS+PITLENQGTVKATTDIS YS
Sbjct: 74  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYS 133

Query: 124 SPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGL 183
           SPEWFS+E ITGFILTGSGVFDGQG + WPYNDCKKN  CQ+LPISIKF++LNHTIVDGL
Sbjct: 134 SPEWFSLEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGL 193

Query: 184 TSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVS 243
           TS+NS GFHTSVFYC+NFTATNM IIAP NSPNTDGMHLSTSKL+TI NS+IGTGDDCVS
Sbjct: 194 TSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGTGDDCVS 253

Query: 244 IGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASP 303
           IGH+ E +TVTNVTCGPGHGL   SLGKY KEKGV DVLVKNCTIFNATNGARIKTWASP
Sbjct: 254 IGHSTENITVTNVTCGPGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASP 313

Query: 304 VAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVL 363
           V+GLAS IIFEDIVMYNVKNPIIIDQTYGTK  KK S WK+S+V FKNIRGTSTTNVAVL
Sbjct: 314 VSGLASRIIFEDIVMYNVKNPIIIDQTYGTK-KKKESNWKVSNVQFKNIRGTSTTNVAVL 373

Query: 364 LECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LECS+L PCEGVELRDINL+YGGT+LRNTTI+SSC NAKI TFGVQ PP CVV
Sbjct: 374 LECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 422

[Close]

BLAST of Lsi02G024190 vs. ExPASy TrEMBL
Match: A0A1S3BRD3 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103492867 PE=3 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 2.6e-199
Identity = 343/414 (82.85%), Postives = 373/414 (90.10%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVN-DIKANVDLNGNGGAVFDVTKHGAKGDGKTDDA 63
           +QQL  P AAP PLGI TLPD+ + VN DI  N DLNGNGG+VF VTKHGAK DGKTDDA
Sbjct: 44  NQQLPSPVAAPGPLGIETLPDLDNMVNDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDA 103

Query: 64  QAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEY 123
           QAF+TTWI ACRNTVGPAK LIP+GT+LVGPVT AGPCKSFPITLENQGTVKATTDIS+Y
Sbjct: 104 QAFVTTWIEACRNTVGPAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQY 163

Query: 124 SSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDG 183
           SSPEWFSIE ITGFILTGSGVFDGQG AAWPYNDCK N  CQ+LPISIKFS+LN TIVD 
Sbjct: 164 SSPEWFSIEDITGFILTGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDR 223

Query: 184 LTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCV 243
           LTSLNSKGFH S+F C+NFTATN+NIIAP +SPNTDG+HLSTSKL+ I NS+IGTGDDCV
Sbjct: 224 LTSLNSKGFHMSLFSCYNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCV 283

Query: 244 SIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWAS 303
           SIGH+ EK+TVTNVTCGPGHGLSVGSLGKYP+EK V DVLVKNCTIFNATNGARIKT+AS
Sbjct: 284 SIGHSTEKITVTNVTCGPGHGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFAS 343

Query: 304 PVAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAV 363
           P++G ASGIIFEDIVMYNVK PIIIDQTY T  NK+ SKWK+SDVHFKNIRGTS TNVAV
Sbjct: 344 PISGSASGIIFEDIVMYNVKYPIIIDQTYDTNENKE-SKWKVSDVHFKNIRGTSATNVAV 403

Query: 364 LLECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LL+CS+LLPCEGVELRDI+LTYGGTDL+NTTI+SSC NAKITTFGVQNPP C V
Sbjct: 404 LLDCSKLLPCEGVELRDIDLTYGGTDLKNTTIVSSCSNAKITTFGVQNPPPCDV 456

[Close]

BLAST of Lsi02G024190 vs. ExPASy TrEMBL
Match: A0A5D3C9J8 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00530 PE=3 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 7.6e-199
Identity = 342/414 (82.61%), Postives = 372/414 (89.86%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVN-DIKANVDLNGNGGAVFDVTKHGAKGDGKTDDA 63
           +QQL  P AAP P GI TLPD+ + VN DI  N DLNGNGG+VF VTKHGAK DGKTDDA
Sbjct: 44  NQQLPSPVAAPGPFGIETLPDLDNMVNDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDA 103

Query: 64  QAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEY 123
           QAF+TTWI ACRNTVGPAK LIP+GT+LVGPVT AGPCKSFPITLENQGTVKATTDIS+Y
Sbjct: 104 QAFVTTWIEACRNTVGPAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQY 163

Query: 124 SSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDG 183
           SSPEWFSIE ITGFILTGSGVFDGQG AAWPYNDCK N  CQ+LPISIKFS+LN TIVD 
Sbjct: 164 SSPEWFSIEDITGFILTGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDR 223

Query: 184 LTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCV 243
           LTSLNSKGFH S+F C+NFTATN+NIIAP +SPNTDG+HLSTSKL+ I NS+IGTGDDCV
Sbjct: 224 LTSLNSKGFHMSLFSCYNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCV 283

Query: 244 SIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWAS 303
           SIGH+ EK+TVTNVTCGPGHGLSVGSLGKYP+EK V DVLVKNCTIFNATNGARIKT+AS
Sbjct: 284 SIGHSTEKITVTNVTCGPGHGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFAS 343

Query: 304 PVAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAV 363
           P++G ASGIIFEDIVMYNVK PIIIDQTY T  NK+ SKWK+SDVHFKNIRGTS TNVAV
Sbjct: 344 PISGSASGIIFEDIVMYNVKYPIIIDQTYDTNENKE-SKWKVSDVHFKNIRGTSATNVAV 403

Query: 364 LLECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LL+CS+LLPCEGVELRDI+LTYGGTDL+NTTI+SSC NAKITTFGVQNPP C V
Sbjct: 404 LLDCSKLLPCEGVELRDIDLTYGGTDLKNTTIVSSCSNAKITTFGVQNPPPCDV 456

[Close]

BLAST of Lsi02G024190 vs. NCBI nr
Match: XP_038896336.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 761.9 bits (1966), Expect = 2.8e-216
Identity = 367/413 (88.86%), Postives = 387/413 (93.70%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQ 63
           +Q LL PAAAP PLGIGTLPD+G TVNDIKANVDLNGNGG+VFDVTKHGAKGDGKTDDAQ
Sbjct: 46  NQPLLHPAAAPLPLGIGTLPDLGGTVNDIKANVDLNGNGGSVFDVTKHGAKGDGKTDDAQ 105

Query: 64  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 123
           AFMTTWI ACRN  GPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDI++YS
Sbjct: 106 AFMTTWIEACRNAEGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDITQYS 165

Query: 124 SPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGL 183
           SPEWFSIE ITGFILTGSGVFDGQG A+WPYNDCKKN  CQILPISIKF+KLNHTIVDGL
Sbjct: 166 SPEWFSIEEITGFILTGSGVFDGQGAASWPYNDCKKNTKCQILPISIKFTKLNHTIVDGL 225

Query: 184 TSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVS 243
            SLNSKGFHTS+FYC+NFTATNMNIIAPGNSPNTDGMH+STSKL+TITNSVIGTGDDCVS
Sbjct: 226 ASLNSKGFHTSIFYCYNFTATNMNIIAPGNSPNTDGMHISTSKLVTITNSVIGTGDDCVS 285

Query: 244 IGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASP 303
           IGH+ EK+ VTNVTCGPGHGLSVGSLGKY KEK V DVLVKNCTIFNATNGARIKTWASP
Sbjct: 286 IGHSTEKIVVTNVTCGPGHGLSVGSLGKYSKEKSVYDVLVKNCTIFNATNGARIKTWASP 345

Query: 304 VAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVL 363
           ++GLASGI FEDI+MYNVKNPIIIDQTYGTK  KKAS WKISDVHFKNIRGTSTTNVAV 
Sbjct: 346 ISGLASGITFEDIIMYNVKNPIIIDQTYGTK-QKKASNWKISDVHFKNIRGTSTTNVAVS 405

Query: 364 LECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LECSELLPCE VELRDINLTYGG +LRNTTILSSC NAKI ++G+QNPPACVV
Sbjct: 406 LECSELLPCEEVELRDINLTYGGPNLRNTTILSSCSNAKIDSYGMQNPPACVV 457

[Close]

BLAST of Lsi02G024190 vs. NCBI nr
Match: KAA0048661.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK18163.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 757.7 bits (1955), Expect = 5.3e-215
Identity = 366/413 (88.62%), Postives = 386/413 (93.46%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQ 63
           ++Q LRPA APR LGIGTLPDIGSTVNDI+AN+ LN NGG+VFDVTKHGAK DG+TDDAQ
Sbjct: 46  NEQFLRPAGAPRRLGIGTLPDIGSTVNDIRANIVLNENGGSVFDVTKHGAKADGETDDAQ 105

Query: 64  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 123
           AFMTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDISEYS
Sbjct: 106 AFMTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 165

Query: 124 SPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGL 183
           SPEWFSIE ITGFILTGSGVFDGQG   WPYNDCKKN+FCQ+LPISIKFS+LNHTIVDGL
Sbjct: 166 SPEWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGL 225

Query: 184 TSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVS 243
           TS+NS GFHTSVFYC+NFTATNM IIAP NSPNTDGMHLSTSKL+TITNSVIGTGDDCVS
Sbjct: 226 TSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVS 285

Query: 244 IGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASP 303
           IGH+ E + VTNVTCGPGHGLSVGSLGKY KEK V +VLVKNCTIFNATNGARIKTWAS 
Sbjct: 286 IGHSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASR 345

Query: 304 VAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVL 363
           ++GLASGIIFEDIVMYNVKNPIIIDQTYGTK  KK S WKISDVHFKNIRGTSTTNVAVL
Sbjct: 346 ISGLASGIIFEDIVMYNVKNPIIIDQTYGTK-KKKVSNWKISDVHFKNIRGTSTTNVAVL 405

Query: 364 LECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LECSELLPCEGVELRDINLTYGGT+LRNTTI+SSC NAKI TFGVQNPP CVV
Sbjct: 406 LECSELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of Lsi02G024190 vs. NCBI nr
Match: KAA0043575.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 757.7 bits (1955), Expect = 5.3e-215
Identity = 366/413 (88.62%), Postives = 386/413 (93.46%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQ 63
           ++Q LRPA APR LGIGTLPDIGSTVNDI+AN+ LN NGG+VFDVTKHGAK DG+TDDAQ
Sbjct: 46  NEQFLRPAGAPRRLGIGTLPDIGSTVNDIRANIVLNENGGSVFDVTKHGAKADGETDDAQ 105

Query: 64  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 123
           AFMTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDISEYS
Sbjct: 106 AFMTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 165

Query: 124 SPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGL 183
           SPEWFSIE ITGFILTGSGVFDGQG   WPYNDCKKN+FCQ+LPISIKFS+LNHTIVDGL
Sbjct: 166 SPEWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGL 225

Query: 184 TSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVS 243
           TS+NS GFHTSVFYC+NFTATNM IIAP NSPNTDGMHLSTSKL+TITNSVIGTGDDCVS
Sbjct: 226 TSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVS 285

Query: 244 IGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASP 303
           IGH+ E + VTNVTCGPGHGLSVGSLGKY KEK V +VLVKNCTIFNATNGARIKTWAS 
Sbjct: 286 IGHSTENIVVTNVTCGPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASR 345

Query: 304 VAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVL 363
           ++GLASGIIFEDIVMYNVKNPIIIDQTYGTK  KK S WKISDVHFKNIRGTSTTNVAVL
Sbjct: 346 ISGLASGIIFEDIVMYNVKNPIIIDQTYGTK-KKKVSNWKISDVHFKNIRGTSTTNVAVL 405

Query: 364 LECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LECSELLPCEGVELRDINLTYGGT+LRNTTI+SSC NAKI TFGVQNPP CVV
Sbjct: 406 LECSELLPCEGVELRDINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 457

[Close]

BLAST of Lsi02G024190 vs. NCBI nr
Match: XP_031745094.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 744.6 bits (1921), Expect = 4.7e-211
Identity = 360/413 (87.17%), Postives = 381/413 (92.25%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQ 63
           ++Q LRPA APR LG  TLP+IG TVNDIKANVDLN NGG+VFDVTKHGAK +GKTDDAQ
Sbjct: 42  NEQFLRPAEAPRRLGFSTLPNIGGTVNDIKANVDLNQNGGSVFDVTKHGAKANGKTDDAQ 101

Query: 64  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 123
           AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDIS YS
Sbjct: 102 AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYS 161

Query: 124 SPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGL 183
           SPEWFSIE ITGFILTGSGVFDGQG + WPYNDCKKN  CQ+LPISIKF++LNHTIVDGL
Sbjct: 162 SPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGL 221

Query: 184 TSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVS 243
           TS+NS GFHTSVFYC+NFTATNM IIAP NSPNTDGMHLSTSKL+TI NSVIGTGDDCVS
Sbjct: 222 TSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVS 281

Query: 244 IGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASP 303
           IGH+ E +TVTNVTCGPGHGLSVGSLGKY KEKGV DVLVKNCTIFNATNGARIKTWASP
Sbjct: 282 IGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASP 341

Query: 304 VAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVL 363
           V+GLAS IIFEDIVMYNVKNPIIIDQTYGTK  KK S WK+S+V FKNIRGTSTTNVAVL
Sbjct: 342 VSGLASRIIFEDIVMYNVKNPIIIDQTYGTK-KKKESNWKVSNVQFKNIRGTSTTNVAVL 401

Query: 364 LECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LECS+L PCEGVELRDINL+YGGT+LRNTTI+SSC NAKI TFGVQNPP CVV
Sbjct: 402 LECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCVV 453

[Close]

BLAST of Lsi02G024190 vs. NCBI nr
Match: XP_031741281.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 734.6 bits (1895), Expect = 4.8e-208
Identity = 355/413 (85.96%), Postives = 376/413 (91.04%), Query Frame = 0


Query: 4   DQQLLRPAAAPRPLGIGTLPDIGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQ 63
           ++Q LRPA APR LG  TLPDIG TVNDI ANVDLN NGG+VFDVTKHGAK DGKTDDAQ
Sbjct: 42  NKQFLRPAEAPRHLGFNTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKADGKTDDAQ 101

Query: 64  AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYS 123
           AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKS+PITLENQGTVKATTDIS YS
Sbjct: 102 AFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYS 161

Query: 124 SPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGL 183
           SPEWFSIE ITGFILTGSGVFDGQG + WPYNDCKKN  CQ+LPISIKF++LNHTIVDGL
Sbjct: 162 SPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGL 221

Query: 184 TSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVS 243
           TS+NS GFHTSVFYC+NFTATNM IIAP NSPNTDG HLSTSKL+TI NSVIGTGDDCVS
Sbjct: 222 TSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGTHLSTSKLVTIANSVIGTGDDCVS 281

Query: 244 IGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASP 303
           IGH+ E +TVTNVTCGPGHGLSVGSLGKY KEKGV DVLVKNCTIFNATNGARIKTWAS 
Sbjct: 282 IGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASR 341

Query: 304 VAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKKASKWKISDVHFKNIRGTSTTNVAVL 363
           ++GLAS IIFEDIVMYNVKNPIIIDQTY TK  KK S WK+S+V FKNIRGTSTTNVAVL
Sbjct: 342 ISGLASRIIFEDIVMYNVKNPIIIDQTYSTK-KKKESNWKVSNVQFKNIRGTSTTNVAVL 401

Query: 364 LECSELLPCEGVELRDINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPACVV 417
           LECS+L PCEGVELRDINL+YGGT+LRNTTI+SSC NAKI TFGVQ PP CVV
Sbjct: 402 LECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 453

[Close]

BLAST of Lsi02G024190 vs. TAIR 10
Match: AT1G02790.1 (polygalacturonase 4 )

HSP 1 Score: 340.1 bits (871), Expect = 2.5e-93
Identity = 177/382 (46.34%), Postives = 237/382 (62.04%), Query Frame = 0


Query: 39  NGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAG 98
           N     V+D+TK GA GDG T+  +AF+ TWI  C + V PA  L+P+GTFL GPV FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAG 104

Query: 99  PCKSFPITLENQGTVKATTDISEYSSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCK 158
           PCKS  +T+   GT+ ATT  S Y++PEWF  E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKS-KVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 159 KNKFCQILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTD 218
           K   C + P S+KF  + +  ++G++S+N+K FH  +    N    N+ + AP  SPNTD
Sbjct: 165 KKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTD 224

Query: 219 GMHLSTSKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGV 278
           G+HLS +  ++I +S I TGDDCVS+G     VTV  V CGPGHGLSVGSLGKY  E+ V
Sbjct: 225 GIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDV 284

Query: 279 SDVLVKNCTIFNATNGARIKTWASPVAGLASGIIFEDIVMYNVKNPIIIDQTYGTKGNKK 338
           S + V NCT+    NG RIKTW       A  I FE+I+M +VKNPIIIDQ YG++G   
Sbjct: 285 SGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGD- 344

Query: 339 ASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTY----GGTDLRNT-- 398
            S+  ISD+ FKNIRGT+ T   V + CS+ +PC+GV + D+NL Y    GG    ++  
Sbjct: 345 -SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVGKTGGEKKSSSGG 404

Query: 399 TILSSCMNAKITTFGVQNPPAC 415
            + + C NA +   G  + P C
Sbjct: 405 LVGALCDNANVIFGGKLSFPMC 420

[Close]

BLAST of Lsi02G024190 vs. TAIR 10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-90
Identity = 169/382 (44.24%), Postives = 239/382 (62.57%), Query Frame = 0


Query: 47  DVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFP-I 106
           DV   GA+ +   D  +AF+  W  AC+++      +IP+G F VG + F+GPC +   +
Sbjct: 36  DVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNL 95

Query: 107 TLENQGTVKATTDISEY-SSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQ 166
           T+     VKA+TD+S+Y S   W     I G  LTG G FDGQG  AWP+N+C  +  C+
Sbjct: 96  TVR----VKASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCK 155

Query: 167 ILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLST 226
           +LP S+KF  +N T+V  ++S+NSK FH ++  C +F  T +NI AP +SPNTDG+H+  
Sbjct: 156 LLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIER 215

Query: 227 SKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVK 286
           S  +  + S I TGDDCVSIG    ++T+T++ CGPGHG+SVGSLG+YP EK V+ ++VK
Sbjct: 216 SSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVK 275

Query: 287 NCTIFNATNGARIKTWA-SPVAGLASGIIFEDIVMYNVKNPIIIDQTY---GTKGNKKAS 346
           +C I   TNG RIKTWA SP    A+ + FE+I+M NV NPIIIDQ+Y    +  +   S
Sbjct: 276 DCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPS 335

Query: 347 KWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTD--------LRNT 406
           K ++S+++FKNIRGTS++ VAV L CS  +PC+ V L +++L    +D          N 
Sbjct: 336 KVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNE 395

Query: 407 TILSSCMNAKITTFGVQNPPAC 415
            + SSC N +    G Q PP C
Sbjct: 396 AVSSSCRNVRANYIGTQIPPPC 413

[Close]

BLAST of Lsi02G024190 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 327.0 bits (837), Expect = 2.2e-89
Identity = 179/396 (45.20%), Postives = 232/396 (58.59%), Query Frame = 0


Query: 25  IGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLI 84
           +G     + A V     GGA  DV   GAKGDGKTDD+ AF   W  AC      +   +
Sbjct: 50  VGGAAASVGAKVTGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEAC---AAGSTITV 109

Query: 85  PQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPE--WFSIESITGFILTGS- 144
           P+G +LV  + F GPCK  P+TLE  G  KA   + + + P   W   E++  F L G+ 
Sbjct: 110 PKGEYLVESLEFKGPCKG-PVTLELNGNFKAPATV-KTTKPHAGWIDFENLADFTLNGNK 169

Query: 145 GVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNF 204
            +FDGQG  AW  NDC K   C  LPI+I+F+ L ++ ++ +TS NSK FH ++  C N 
Sbjct: 170 AIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNI 229

Query: 205 TATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPG 264
           T T++ I AP  S NTDG+H+  S  + +  + I TGDDCVSIG   E + V NV CGPG
Sbjct: 230 TLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPG 289

Query: 265 HGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASPVAGLASGIIFEDIVMYNV 324
           HG+S+GSLG+YP E+ V  V V+ C I N  NG RIKTW     G+AS I+FEDI M NV
Sbjct: 290 HGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNV 349

Query: 325 KNPIIIDQTYGTKGNKKA---SKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 384
             P++IDQ Y   G+ KA   SK K+SDV  KNI+GTS T VAV L CS+ +PC  + L 
Sbjct: 350 SLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALS 409

Query: 385 DINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPAC 415
           DINL + G   +    +S+C N K    G   P AC
Sbjct: 410 DINLVHNG---KEGPAVSACSNIKPILSGKLVPAAC 437

[Close]

BLAST of Lsi02G024190 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 315.8 bits (808), Expect = 5.0e-86
Identity = 174/396 (43.94%), Postives = 229/396 (57.83%), Query Frame = 0


Query: 25  IGSTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLI 84
           +G     + A V      GA  DV   GAKGD KTDD+ AF   W  AC      +   +
Sbjct: 50  VGGAAASVGAKVS-GAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEAC---AAGSTITV 109

Query: 85  PQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPE--WFSIESITGFILTGS- 144
           P+G ++V  + F GPCK  P+TLE  G  KA   + + + P   W   E+I  F L G+ 
Sbjct: 110 PKGEYMVESLEFKGPCKG-PVTLELNGNFKAPATV-KTTKPHAGWIDFENIADFTLNGNK 169

Query: 145 GVFDGQGFAAWPYNDCKKNKFCQILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNF 204
            +FDGQG  AW  NDC K   C  LPI+I+F+ L ++ ++ +TS NSK FH ++  C N 
Sbjct: 170 AIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNI 229

Query: 205 TATNMNIIAPGNSPNTDGMHLSTSKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPG 264
           T +++ I AP  S NTDG+H+  S  + +  + I TGDDCVSIG   E + V NV CGPG
Sbjct: 230 TLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPG 289

Query: 265 HGLSVGSLGKYPKEKGVSDVLVKNCTIFNATNGARIKTWASPVAGLASGIIFEDIVMYNV 324
           HG+S+GSLG+YP E+ V  V V+ C I N  NG RIKTW     G+AS I+FEDI M NV
Sbjct: 290 HGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNV 349

Query: 325 KNPIIIDQTYGTKGNKKA---SKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 384
             P++IDQ Y   G+ KA   S+ K+SDV  K I+GTS T VAV L CS+ +PC  + L 
Sbjct: 350 SLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALS 409

Query: 385 DINLTYGGTDLRNTTILSSCMNAKITTFGVQNPPAC 415
           DINL + G   +    +S+C N K    G   P AC
Sbjct: 410 DINLVHNG---KEGPAVSACSNIKPILSGKLVPAAC 436

[Close]

BLAST of Lsi02G024190 vs. TAIR 10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-80
Identity = 160/376 (42.55%), Postives = 226/376 (60.11%), Query Frame = 0


Query: 45  VFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFP 104
           VF+V +HG+K DGKTD+  AF + W  AC+   G +K  +P+GTF +G V F GPCK+ P
Sbjct: 30  VFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKN-P 89

Query: 105 ITLENQGTVKATTDISEYSSPEWFSIESITGFILTGSGVFDGQGFAAWPYNDCKKNKFCQ 164
           I     GT+ A  + ++     W +   I    ++GSG  DGQG  +WP NDC KN  C 
Sbjct: 90  IEFIIDGTLLAPANPNDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNPNCP 149

Query: 165 ILPISIKFSKLNHTIVDGLTSLNSKGFHTSVFYCHNFTATNMNIIAPGNSPNTDGMHLST 224
            L IS+ F+ +N++ +  +TSLNSK  H + F+ H+F  T + I AP +SPNTDG+ + +
Sbjct: 150 KLAISMGFAFVNNSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGS 209

Query: 225 SKLITITNSVIGTGDDCVSIGHTCEKVTVTNVTCGPGHGLSVGSLGKYPKEKGVSDVLVK 284
              I I+N+ IGTGDDC++I     K+ ++N+ CGPGHG+SVGSLGK   EK V D+ V+
Sbjct: 210 CSNIQISNTNIGTGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVR 269

Query: 285 NCTIFNAT-NGARIKTWASPVAG-LASGIIFEDIVMYNVKNPIIIDQTYGTK---GNKKA 344
           +  IFN T +G RIKTW S  +  L S  ++E+I M +V  PI IDQ Y       +++ 
Sbjct: 270 D-VIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERK 329

Query: 345 SKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTDLRNTTILSSCM 404
           S  +I D+  KNI GTS   VAV L+CS+  PC+ VEL DIN+   G  L + + ++ C 
Sbjct: 330 SHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNG--LEDGSSITVCE 389

Query: 405 NAKITTFGVQNPPACV 416
           N      G   P  C+
Sbjct: 390 NVDGFARGKMFPQHCL 401

The following BLAST results are available for this feature:

BLAST of Lsi02G024190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49062	3.5e-92	46.34	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 ...	[more]
Q6H9K0	2.1e-89	44.92	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
Q05967	1.1e-88	45.58	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
P35339	2.3e-88	45.90	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
Q39786	3.7e-86	44.47	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]

BLAST of Lsi02G024190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4W1	2.6e-215	88.62	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TQ89	2.6e-215	88.62	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0KMA6	2.0e-207	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1	[more]
A0A1S3BRD3	2.6e-199	82.85	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103492867 PE=3 SV=1	[more]
A0A5D3C9J8	7.6e-199	82.61	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Lsi02G024190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896336.1	2.8e-216	88.86	exopolygalacturonase-like [Benincasa hispida]	[more]
KAA0048661.1	5.3e-215	88.62	exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalact...	[more]
KAA0043575.1	5.3e-215	88.62	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_031745094.1	4.7e-211	87.17	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_031741281.1	4.8e-208	85.96	exopolygalacturonase [Cucumis sativus]	[more]

BLAST of Lsi02G024190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02790.1	2.5e-93	46.34	polygalacturonase 4	[more]
AT4G18180.1	1.2e-90	44.24	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	2.2e-89	45.20	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	5.0e-86	43.94	Pectin lyase-like superfamily protein	[more]
AT2G26620.1	1.4e-80	42.55	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 308..329 e-value: 2000.0 score: 5.1 coord: 225..246 e-value: 850.0 score: 7.7 coord: 248..268 e-value: 6200.0 score: 1.6 coord: 198..224 e-value: 4400.0 score: 2.7 coord: 278..299 e-value: 6.4 score: 15.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 38..414 e-value: 1.2E-109 score: 369.1
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 77..391 e-value: 3.8E-91 score: 305.5
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 255..268
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 42..411
None	No IPR available	PANTHER	PTHR31375:SF158	POLYGALACTURONASE	coord: 42..411
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 44..415

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G024190.1	Lsi02G024190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity