Lsi02G023990 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G023990
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Adenine nucleotide alpha hydrolases-like superfamily protein
Location	chr02: 30655968 .. 30657977 (+)
RNA-Seq Expression	Lsi02G023990
Synteny	Lsi02G023990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACAGCGGAGAAGCCAGTTATAGTGATCGGAGTCGATGACAGCGAATACGCAACCTACGCTTTGGAGTGGACACTCGACCACTTCTTCTCTTCAACGCCAAATCCTCCGTTCAAGCTCGTCGTTGTCTACGCCAAACCGTTTCCCGACGTCTTCATCGGCGTCGGCGGACCTGGAAGTAAGATCGATATTGCTTCTCTCTGATAAAATTAGTTTCAAATCGCTGATCGTTGATGTATGCTTGCTTTAGCTTTAGCAATGCGGTAGTGAATCCAGAAATTGTAATCAGTGGTTGTAGGATCTGCTGGTAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCTGCGTTGGTTATCGCAACTGCGAGAGGAATCTGCGAATCCAGATCGGTACGTAACAGGATGGAGTTTAATTGGTTGATTATGATATAAATTGTTGGAGTTTGGATTTGGATATCATTTTGTTGGTTCTTATGAGGAAAATTGAAATGGATTAGAAGAGTTTGGGAATCCGTAGGGAGAGTGAAGAGAAGGATGAGAATGGAATTCGATTTTTTTTTTTTTTTTTTTTTTTTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTTTTTTTTTTTTTTTTTTTTTGGTTCTCTGGAATTCTGTCAGTAATTGATCAATTTCTTGAGTTGATGGACTGGAAAATGCAGGTGAATGATGCGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTTTGTCAGGCGGTGGATAAGCACAAGGCTTCAATGCTGGTGGTGGGAAGCCATGGCTATGGAGCTGTCAAGAGGTACTTTGTTTAACACGCATTTTAATAGGGATTGTGGAATATAGCTAACAGGCAGTGATTTTCATTTTTGTTAGGTTCAAAATCAATCGTTACATAAAATTAATTTCATATTTAACTTCACACCTTTAAATGCAATTTTGATTAAACATGAATTAAGCATGCTTTATATGCTTGTTAAAAGGTTTTTTTAAACAACTTTTTAGTCCACACTGTCAGATTTGGTCCCTAAAAATTTACAATAGGTTTCTGAATTTTGGCTTGTTATCTAACAAGTGTTTTAACTTTTTTTAAAAAATGTCAAATTTAGATTAGTTCGATAACTATTTGATTTTTTAAAAACACTCTGTGAATTGTTTTGTTTTTACTTTTTAGGAGTCCTTCAAAATACCAAGCAACATATATATATATATATATAGGTAAGGATAGACAAACTTAATTTAAAAATTAAATGGTTCATTAATGTACTTATTTTACTACATTTATAAAGTTTTTGGGCCAAAATGAGATATATTTCTTAAGGATGTTTTCAAATATAATAAAATGAGTCAAAATGGTGGTATATATTCTTCACAAGTCCTTGGTTTATATTTTTAAGAAGACATACCCTTAATAATAAATGAAGAAATAAAATGTAGTGAATGGGGTTGAATTTGAAAATTGAAATGGATGATGCAGGGCGTTTTTGGGGAGTGTGAGTGATTATTGTGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAGCTCAAAACCAAGGAAGGTTGA

mRNA sequence

ATGGCGACAGCGGAGAAGCCAGTTATAGTGATCGGAGTCGATGACAGCGAATACGCAACCTACGCTTTGGAGTGGACACTCGACCACTTCTTCTCTTCAACGCCAAATCCTCCGTTCAAGCTCGTCGTTGTCTACGCCAAACCGTTTCCCGACGTCTTCATCGGCGTCGGCGGACCTGGAAGATCTGCTGGTAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCTGCGTTGGTTATCGCAACTGCGAGAGGAATCTGCGAATCCAGATCGGTGAATGATGCGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTTTGTCAGGCGGTGGATAAGCACAAGGCTTCAATGCTGGTGGTGGGAAGCCATGGCTATGGAGCTGTCAAGAGGGCGTTTTTGGGGAGTGTGAGTGATTATTGTGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAGCTCAAAACCAAGGAAGGTTGA

Coding sequence (CDS)

ATGGCGACAGCGGAGAAGCCAGTTATAGTGATCGGAGTCGATGACAGCGAATACGCAACCTACGCTTTGGAGTGGACACTCGACCACTTCTTCTCTTCAACGCCAAATCCTCCGTTCAAGCTCGTCGTTGTCTACGCCAAACCGTTTCCCGACGTCTTCATCGGCGTCGGCGGACCTGGAAGATCTGCTGGTAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCTGCGTTGGTTATCGCAACTGCGAGAGGAATCTGCGAATCCAGATCGGTGAATGATGCGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTTTGTCAGGCGGTGGATAAGCACAAGGCTTCAATGCTGGTGGTGGGAAGCCATGGCTATGGAGCTGTCAAGAGGGCGTTTTTGGGGAGTGTGAGTGATTATTGTGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAGCTCAAAACCAAGGAAGGTTGA

Protein sequence

MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPGRSAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHKASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG

Homology

[Close]

BLAST of Lsi02G023990 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-09
Identity = 39/136 (28.68%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 22  ALEWTLDHFFSSTPNPPFKLVVVYAKPF-PDVFIGVGGPGRSAGSYQFLNEDLKKKAALV 81
           A EWTL+    S  +  FK+++++ +    D F  V     S   ++ + +  K K   +
Sbjct: 30  AFEWTLEKIVRSNTS-DFKILLLHVQVVDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHL 89

Query: 82  IATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHKASMLVVGSHGYGAVKRAFLGSVS 141
           +      C    V    + +  GD + V+CQ V + +   LVVGS G G  ++ F+G+VS
Sbjct: 90  LEFFVNKCHEIGVGCEAW-IKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVS 149

Query: 142 DYCAHQASCTVMIVKK 157
            +C   A C VM +K+
Sbjct: 150 AFCVKHAECPVMTIKR 163

[Close]

BLAST of Lsi02G023990 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-09
Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 0


Query: 9   IVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPGRSAGSYQF 68
           I + VD SE +++A+ W +DH+      P   +V+++  P   +F    GP       + 
Sbjct: 50  IGVAVDLSEESSFAVRWAVDHYI----RPGDAVVLLHVSPTSVLFGADWGPLPLKTQIED 109

Query: 69  LN-------EDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHKASML 128
            N       ED     +  +A      +        + V + D R  LC  +++   S +
Sbjct: 110 PNAQPQPSQEDFDAFTSTKVADLAKPLKELGFPYKIHIVKDHDMRERLCLEIERLGLSAV 169

Query: 129 VVGSHGYGAVKR----AFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           ++GS G+GA K+      LGSVSDYC H   C V++V+    ++G
Sbjct: 170 IMGSRGFGAEKKRGSDGKLGSVSDYCVHHCVCPVVVVRYPDDRDG 210

[Close]

BLAST of Lsi02G023990 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-09
Identity = 45/169 (26.63%), Postives = 74/169 (43.79%), Query Frame = 0


Query: 9   IVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGP--------- 68
           I + VD SE + +A+ W +DH+      P   +V+++  P   +F    GP         
Sbjct: 47  IGVAVDLSEESAFAVRWAVDHYI----RPGDAVVILHVSPTSVLFGADWGPLPLQTPPPP 106

Query: 69  --GRSAGSY-QFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKH 128
                 G+  +   ED     +  +A      +        + V + D R  LC   ++ 
Sbjct: 107 SAATDPGAQPKPSQEDFDAFTSSKVADLAKPLKEAGFPHKIHIVKDHDMRERLCLETERL 166

Query: 129 KASMLVVGSHGYGAVKRAF---LGSVSDYCAHQASCTVMIVKKLKTKEG 163
             S +++GS G+GA KR     LGSVSDYC H   C V++V+    ++G
Sbjct: 167 NLSAVIMGSRGFGAEKRGSDGKLGSVSDYCVHHCVCPVVVVRYPDDRDG 211

[Close]

BLAST of Lsi02G023990 vs. ExPASy Swiss-Prot
Match: Q57951 (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0531 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 36/115 (31.30%), Postives = 60/115 (52.17%), Query Frame = 0


Query: 44  VYAKPFPDVFIGVGGPGRSAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEG 103
           VYA    DV   VG P  + GS++ ++E LK++    +   + + E   V     E+ EG
Sbjct: 57  VYAIYVVDVSPFVGLP--AEGSWELISELLKEEGQEALKKVKKMAEEWGVK-IHTEMLEG 116

Query: 104 DARYVLCQAVDKHKASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLK 159
                + +  +K KA ++V+G+ G   ++R  LGSV++     A C V++VKK K
Sbjct: 117 VPANEIVEFAEKKKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVKKPK 168

[Close]

BLAST of Lsi02G023990 vs. ExPASy TrEMBL
Match: A0A0A0K987 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G397010 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.3e-81
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MAT EK VIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVF+GVGGPG
Sbjct: 1   MATEEKQVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLNEDLKKKAALVIATARGICES+SVND KYEVDEGDARYVLCQAV+KH 
Sbjct: 61  MIVGSAGSYQFLNEDLKKKAALVIATARGICESKSVNDVKYEVDEGDARYVLCQAVEKHN 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           ASMLVVGSHGYGA+KRAFLGSVSDYCAHQASCTVMIVKKLKTKEG
Sbjct: 121 ASMLVVGSHGYGALKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 165

[Close]

BLAST of Lsi02G023990 vs. ExPASy TrEMBL
Match: A0A5D3D1K7 (APO protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00610 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.6e-80
Identity = 152/165 (92.12%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MAT EK VIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVF+GVGGPG
Sbjct: 1   MATEEKQVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLNEDLKKKAAL+IATARGICES+SVND KYEVDEGDAR VLCQAVDKH 
Sbjct: 61  MIVGSAGSYQFLNEDLKKKAALIIATARGICESKSVNDVKYEVDEGDARNVLCQAVDKHN 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           ASMLVVGSHGYGA+KRAFLGSVSDYCAHQASCTVMIVKKLKTKEG
Sbjct: 121 ASMLVVGSHGYGALKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 165

[Close]

BLAST of Lsi02G023990 vs. ExPASy TrEMBL
Match: A0A1S3BRV2 (universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103492817 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 151/165 (91.52%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MAT EK VIVIGVDDSEYATYALEWTLDHFFSSTPN PFKLVVVYAKPFPDVF+GVGGPG
Sbjct: 1   MATEEKQVIVIGVDDSEYATYALEWTLDHFFSSTPNSPFKLVVVYAKPFPDVFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLNEDLKKKAAL+IATARGICES+SVND KYEVDEGDAR VLCQAVDKH 
Sbjct: 61  MIVGSAGSYQFLNEDLKKKAALIIATARGICESKSVNDVKYEVDEGDARNVLCQAVDKHN 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           ASMLVVGSHGYGA+KRAFLGSVSDYCAHQASCTVMIVKKLKTKEG
Sbjct: 121 ASMLVVGSHGYGALKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 165

[Close]

BLAST of Lsi02G023990 vs. ExPASy TrEMBL
Match: A0A6J1JQ78 (universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487960 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 149/163 (91.41%), Postives = 155/163 (95.09%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MATAEKPV+VIGVDDSEYATYALEWTLDHFFSST NPPFKLVVVYAKPFPDVFIGVGGPG
Sbjct: 1   MATAEKPVMVIGVDDSEYATYALEWTLDHFFSSTVNPPFKLVVVYAKPFPDVFIGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLN+DLKKKAAL+IATARGICES+ VNDAK+EVDEGDARYVLCQAVDKH+
Sbjct: 61  MIVGSAGSYQFLNDDLKKKAALIIATARGICESKLVNDAKFEVDEGDARYVLCQAVDKHR 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTK 161
           ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKL  K
Sbjct: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLNPK 163

[Close]

BLAST of Lsi02G023990 vs. ExPASy TrEMBL
Match: A0A6J1GP13 (universal stress protein A-like protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456168 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.5e-78
Identity = 148/163 (90.80%), Postives = 155/163 (95.09%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MATAEKPV+VIGVDDSEYATYALEWTLDHFFSST NPPFKLVVVYAKPFPDVF+GVGGPG
Sbjct: 1   MATAEKPVMVIGVDDSEYATYALEWTLDHFFSSTVNPPFKLVVVYAKPFPDVFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLN+DLKKKAAL+IATARGICES+ VNDAK+EVDEGDARYVLCQAVDKH+
Sbjct: 61  MIVGSAGSYQFLNDDLKKKAALIIATARGICESKLVNDAKFEVDEGDARYVLCQAVDKHR 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTK 161
           ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKL  K
Sbjct: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLNPK 163

[Close]

BLAST of Lsi02G023990 vs. NCBI nr
Match: KGN44937.1 (hypothetical protein Csa_016142 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 6.7e-81
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MAT EK VIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVF+GVGGPG
Sbjct: 1   MATEEKQVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLNEDLKKKAALVIATARGICES+SVND KYEVDEGDARYVLCQAV+KH 
Sbjct: 61  MIVGSAGSYQFLNEDLKKKAALVIATARGICESKSVNDVKYEVDEGDARYVLCQAVEKHN 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           ASMLVVGSHGYGA+KRAFLGSVSDYCAHQASCTVMIVKKLKTKEG
Sbjct: 121 ASMLVVGSHGYGALKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 165

[Close]

BLAST of Lsi02G023990 vs. NCBI nr
Match: XP_031745099.1 (universal stress protein PHOS34 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 6.7e-81
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MAT EK VIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVF+GVGGPG
Sbjct: 1   MATEEKQVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLNEDLKKKAALVIATARGICES+SVND KYEVDEGDARYVLCQAV+KH 
Sbjct: 61  MIVGSAGSYQFLNEDLKKKAALVIATARGICESKSVNDVKYEVDEGDARYVLCQAVEKHN 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           ASMLVVGSHGYGA+KRAFLGSVSDYCAHQASCTVMIVKKLKTKEG
Sbjct: 121 ASMLVVGSHGYGALKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 165

[Close]

BLAST of Lsi02G023990 vs. NCBI nr
Match: KAA0067996.1 (APO protein 3 [Cucumis melo var. makuwa] >TYK18131.1 APO protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 308.5 bits (789), Expect = 3.3e-80
Identity = 152/165 (92.12%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MAT EK VIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVF+GVGGPG
Sbjct: 1   MATEEKQVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLNEDLKKKAAL+IATARGICES+SVND KYEVDEGDAR VLCQAVDKH 
Sbjct: 61  MIVGSAGSYQFLNEDLKKKAALIIATARGICESKSVNDVKYEVDEGDARNVLCQAVDKHN 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           ASMLVVGSHGYGA+KRAFLGSVSDYCAHQASCTVMIVKKLKTKEG
Sbjct: 121 ASMLVVGSHGYGALKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 165

[Close]

BLAST of Lsi02G023990 vs. NCBI nr
Match: XP_008451579.1 (PREDICTED: universal stress protein A-like protein [Cucumis melo])

HSP 1 Score: 305.4 bits (781), Expect = 2.8e-79
Identity = 151/165 (91.52%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MAT EK VIVIGVDDSEYATYALEWTLDHFFSSTPN PFKLVVVYAKPFPDVF+GVGGPG
Sbjct: 1   MATEEKQVIVIGVDDSEYATYALEWTLDHFFSSTPNSPFKLVVVYAKPFPDVFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHK 120
               SAGSYQFLNEDLKKKAAL+IATARGICES+SVND KYEVDEGDAR VLCQAVDKH 
Sbjct: 61  MIVGSAGSYQFLNEDLKKKAALIIATARGICESKSVNDVKYEVDEGDARNVLCQAVDKHN 120

Query: 121 ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           ASMLVVGSHGYGA+KRAFLGSVSDYCAHQASCTVMIVKKLKTKEG
Sbjct: 121 ASMLVVGSHGYGALKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 165

[Close]

BLAST of Lsi02G023990 vs. NCBI nr
Match: XP_038899523.1 (universal stress protein PHOS32-like [Benincasa hispida])

HSP 1 Score: 304.7 bits (779), Expect = 4.8e-79
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MATAEKPVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGVGGPG 60
           MAT EKPVIVIGVDDSEYATYALEWTLDHFF+STPNPPFKLVVVYAKPFPD+F+GVGGPG
Sbjct: 1   MATEEKPVIVIGVDDSEYATYALEWTLDHFFASTPNPPFKLVVVYAKPFPDIFVGVGGPG 60

Query: 61  R---SAGSYQFLNEDLKKKAALVIATARGICESRSVN-DAKYEVDEGDARYVLCQAVDKH 120
               SAGSYQFLNEDLKKKAALVIATARGICES+S+N + KYEVDEGDARYVLCQAV+KH
Sbjct: 61  MIVGSAGSYQFLNEDLKKKAALVIATARGICESKSLNIEVKYEVDEGDARYVLCQAVEKH 120

Query: 121 KASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG 163
           +ASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVK LKTKEG
Sbjct: 121 RASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKMLKTKEG 166

[Close]

BLAST of Lsi02G023990 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 189.5 bits (480), Expect = 2.1e-48
Identity = 99/162 (61.11%), Postives = 121/162 (74.69%), Query Frame = 0


Query: 1   MATAE-KPVIVIGVDDSEYATYALEWTLDHFFSS-TPNPPFKLVVVYAKPFPDVFIGVGG 60
           MAT + K V+V+GVDDSE +TYALEWTLD FF+   PN PFKL +V+AKP     +G+ G
Sbjct: 1   MATGDGKSVMVVGVDDSEQSTYALEWTLDRFFAPYAPNYPFKLFIVHAKPNAVSAVGLAG 60

Query: 61  PGRSAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHKA 120
           PG +A    +++ DLK  AA V+  A+ IC+SRSV+ A  EV EGDAR +LC+ VDKH A
Sbjct: 61  PG-TAEVVPYVDADLKHTAAKVVEKAKAICQSRSVHGAVIEVFEGDARNILCEVVDKHHA 120

Query: 121 SMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLKTK 161
           S+LVVGSHGYGA+KRA LGS SDYCAH A C+VMIVKK K K
Sbjct: 121 SILVVGSHGYGAIKRAVLGSTSDYCAHHAHCSVMIVKKPKIK 161

[Close]

BLAST of Lsi02G023990 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 60/156 (38.46%), Postives = 88/156 (56.41%), Query Frame = 0


Query: 9   IVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFIGV-------GGP-G 68
           +V+ VD SE +  AL W LD+   S+ +     VV++ +P P V  GV       GGP G
Sbjct: 10  VVVAVDGSEVSMEALRWALDNLKLSSSSSDSSFVVLHVQPSPSVAAGVSPGTIPFGGPSG 69

Query: 69  RSAGSYQFLNEDLKKKAA-LVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKHKAS 128
               ++    E  +K+    ++  A  IC  +SVN  K +V  GD +Y +C+AV+   A 
Sbjct: 70  LEVPAFTAAIEQHQKRITDTILEHASQICAEKSVN-VKTQVVIGDPKYKICEAVENLHAD 129

Query: 129 MLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVK 156
           +LV+GS  YG +KR FLGSVS+YC + A C V+I+K
Sbjct: 130 LLVMGSRAYGRIKRMFLGSVSNYCTNHAHCPVVIIK 164

[Close]

BLAST of Lsi02G023990 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 58/163 (35.58%), Postives = 92/163 (56.44%), Query Frame = 0


Query: 9   IVIGVDDSEYATYALEWTLDHF-------FSSTPNPPFKLVVVYAKPFPDVFIGVGGPGR 68
           +V+ +D+S+ + YAL+W +DHF        ++        V+    PF        GPG 
Sbjct: 35  MVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNHFAAFPAGPGG 94

Query: 69  SAGSY--QFLNEDLKK----KAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDK 128
           +   Y    + E +KK     +A +++ A  +C ++ +   +  V EG+A+ ++C+AV+K
Sbjct: 95  ATAVYASSSMIESVKKAQQETSAALLSRALQMCRAKQIR-TETLVLEGEAKEMICEAVEK 154

Query: 129 HKASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLK 159
               +LVVGS G G +KRAFLGSVSDYCAH A+C ++IVK  K
Sbjct: 155 MHVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKPPK 196

[Close]

BLAST of Lsi02G023990 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.4e-22
Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 9   IVIGVDDSEYATYALEWTLDHF-------FSSTPNPPFKLVVVYAKPFPDVFIGVGGPG- 68
           +V+ +D+S+ + YAL+W +DHF        ++        V+    PF        GPG 
Sbjct: 35  MVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNHFAAFPAGPGG 94

Query: 69  ----RSAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVDKH 128
                S+   + + +  ++ +A +++ A  +C ++ +   +  V EG+A+ ++C+AV+K 
Sbjct: 95  ATVYASSSMIESVKKAQQETSAALLSRALQMCRAKQIR-TETLVLEGEAKEMICEAVEKM 154

Query: 129 KASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLK 159
              +LVVGS G G +KRAFLGSVSDYCAH A+C ++IVK  K
Sbjct: 155 HVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKPPK 195

[Close]

BLAST of Lsi02G023990 vs. TAIR 10
Match: AT3G11930.4 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 7.6e-22
Identity = 55/164 (33.54%), Postives = 92/164 (56.10%), Query Frame = 0


Query: 9   IVIGVDDSEYATYALEWTLDHF-------FSSTPNPPFKLVVVYAKPFPDVFIGVGGPG- 68
           +V+ +D+S+ + YAL+W +DHF        ++        V+    PF        GPG 
Sbjct: 35  MVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGMLTVIHVQSPFNHFAAFPAGPGG 94

Query: 69  ------RSAGSYQFLNEDLKKKAALVIATARGICESRSVNDAKYEVDEGDARYVLCQAVD 128
                  S+   + + +  ++ +A +++ A  +C ++ +   +  V EG+A+ ++C+AV+
Sbjct: 95  ATAAVYASSSMIESVKKAQQETSAALLSRALQMCRAKQIR-TETLVLEGEAKEMICEAVE 154

Query: 129 KHKASMLVVGSHGYGAVKRAFLGSVSDYCAHQASCTVMIVKKLK 159
           K    +LVVGS G G +KRAFLGSVSDYCAH A+C ++IVK  K
Sbjct: 155 KMHVDLLVVGSRGLGKIKRAFLGSVSDYCAHHANCPILIVKPPK 197

The following BLAST results are available for this feature:

BLAST of Lsi02G023990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGG8	4.2e-09	28.68	Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g0...	[more]
Q8VYN9	9.3e-09	26.67	Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 S...	[more]
Q8L4N1	9.3e-09	26.63	Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 S...	[more]
Q57951	1.3e-05	31.30	Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43...	[more]

BLAST of Lsi02G023990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K987	3.3e-81	92.73	Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G397010 PE=4 SV...	[more]
A0A5D3D1K7	1.6e-80	92.12	APO protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00610 ...	[more]
A0A1S3BRV2	1.4e-79	91.52	universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103492817 ...	[more]
A0A6J1JQ78	1.2e-78	91.41	universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487...	[more]
A0A6J1GP13	1.5e-78	90.80	universal stress protein A-like protein isoform X1 OS=Cucurbita moschata OX=3662...	[more]

BLAST of Lsi02G023990 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44937.1	6.7e-81	92.73	hypothetical protein Csa_016142 [Cucumis sativus]	[more]
XP_031745099.1	6.7e-81	92.73	universal stress protein PHOS34 [Cucumis sativus]	[more]
KAA0067996.1	3.3e-80	92.12	APO protein 3 [Cucumis melo var. makuwa] >TYK18131.1 APO protein 3 [Cucumis melo...	[more]
XP_008451579.1	2.8e-79	91.52	PREDICTED: universal stress protein A-like protein [Cucumis melo]	[more]
XP_038899523.1	4.8e-79	90.36	universal stress protein PHOS32-like [Benincasa hispida]	[more]

BLAST of Lsi02G023990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47710.1	2.1e-48	61.11	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT1G09740.1	1.5e-22	38.46	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.2	2.0e-22	35.58	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.1	4.4e-22	33.95	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G11930.4	7.6e-22	33.54	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006015	Universal stress protein A family	PRINTS	PR01438	UNVRSLSTRESS	coord: 115..127 score: 38.15 coord: 133..155 score: 36.0 coord: 6..24 score: 27.37
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 1..161 e-value: 5.3E-37 score: 129.8
IPR006016	UspA	PFAM	PF00582	Usp	coord: 9..155 e-value: 4.9E-24 score: 85.4
None	No IPR available	PANTHER	PTHR46553:SF3	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN	coord: 1..160
None	No IPR available	PANTHER	PTHR46553	FAMILY NOT NAMED	coord: 1..160
None	No IPR available	CDD	cd00293	USP_Like	coord: 9..154 e-value: 1.8614E-24 score: 90.1218
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 9..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G023990.1	Lsi02G023990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding