Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTTTCTCTCTCTCTCTCTCAATTCTCAAACCCTCTCTCCTCTTTCCTTAAGCTCTCTTATTATCAAATCCTTTTTACCTCGTTTCAGGCCCTAATTTATCCTTCGTTTTGAGGTTTTAATGCTTATTTTTTGTTCAATTTCGATTCAGAAATTCGAGATTTCTGGTCGACAATGGAGGTATTGAAGGATGATTCCTCCAATTTGGAGATTGGGACTTCGGTCGACTCGTTTCAGAAGTTTTTGGATTCCCAAAAGGATCTCTTTCGCTCCCAGGTCGATCAGCTCCAGACAATTGTCGTCACGCAGTGCAAACTCACTGGCGTCAACCCGCTCTCTCAAGAGATGGTGCGTTTTTCTTTATATTCAATTTACCCTTCAAATTCGTTCTTCAAATCGAGGTCTTAAATGGGCGCCGAACGGTTTTCATTTTAGGGATAATGGTTATGTACTCTTGTACAGTTCTCTTTATATAATCATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTGCAATCGTATAGAAGGTGATGGCGGGAAGAATTTGGATTTCAACTTAAGATTTTATTGCCCCTTTGTTTATTGTCATTGTGCTTTCTTTCTTTCTGGGGTATGCAAAATTGACCTCGTTCGCTCTTGCCAGTAATGGCATGTATGTTTATGGTTTCTGAACTAACTGTTATCAGATGATGATAACAATATCTAGTGGCATGATGGATGAGAGGTCTTGTTGGCTCGTTGCTCGGAATATTAGTCTACTAGTTGAGTGTGGAAGACACTACTTATTGAATTTATTTGAAATATTTTATGAGTATCATGTGTGGCTGTATTATGTATGAAAGGTGGAAATTTTGAAGTGCTTTCCTGTTGGTGTTTGAAAGGAGAAGCTAAATTTCCTTTGGAAGTGTGCCATTAAAGTTTTTTTGTGGCCTCTTTGGTTAGAAAAGTGTCTTTGAAGACAATGGGAATTCTTTTGATAGTTTTTGTGGTCTCTTTGGAGTGTTCTATACAAATTTATGTTTTTTGTGAAAATCATACCCTTTTTTTGATTGACCTAGATTGGAAGTTGCTCTATTAATAGTTGCTTTTGGTGAAGGTTCCCTCGACCAGTGACCTTTAAGTTGTTCTACTTTATTAATTTTCTGAATGTTTAGTCTCTTATTAAAAAAACCTTGGCCCGTTGGCTCAATTTATCTTTTACTTTTCCCACAATGCAATTTCACATGGTTATGATTCTTTAAAACTTAAAACATGGGTTTCATGATCACCTTTTAGGTGCATGATAATTTTAATTGATTACTGACTTTCATGCCTTTTTTTTTTTCTTTTTGGTTGTTGTTGTATTTGTTGTCTAAATACAGGCTGCTGGGGCTTTGTCAATTACAATTGGTAAGTCCGGACGCTGAACTGTTTGATCACTTTGCAAAGATGTTTTCTTTTACTCACTCACATAATAAGAATCATGTTTTCCATTTTCAGGAAAAAGACCCCGAGACCTGCTCAACCCCAAGGCTGTAAAGTATATGCAAACTGTTTTTTCTATTAAAGATGCACTTAGTAAGAAAGAATCTCGAGAAATCAGTGCCTTATTTGGTGTCAAAGTTACACAGGTTTGATATGCTGCTTGTTTTTAAATTGCCAATAATTTAATCCGATAGTTTTGTTTGATTGGGTTTATACAGTTTCCTTTATTTATTTATTTATTTTATTTTATTATAATAAGAGACAACTAAGAACGAGAGAAAATTACAGCAGGTGATTCAACCCAAAAGAGCCAAAGATTTTAGAAGTTTCATTAATTGGCCAATAAAAAAAAGTAACAAACTATAGTTACAGAAGAAATATTAGATAGCTCCAATGAGAGAGTTAAAAATAAACTATAACCATCCTTCTCTATTATGTCTAAAGATGTTCATTGAAAGTTTTTGGTTATTTATATTCTATGTCTGCTGGTTGTTAGGTCCGTGATTTTTTTAATAGCCAACGTTCAAGGGTGAGGAAACTAGTTCGTGTGTCACGGGAAAAATCCATCCAATCTAATTCTTGCAAACAACTTGAAGTTGGAGGGATTGCAACAAACAATGACCCCAGTATGCCAATTGATGCAGTTCCATTGAACTCTGATGCAGTGGTTCCTTTGAACTCTGTTGCACCAATTCCGTTGAACTCTGAAGCTCCAGTTCCTTTGAATTTTGATACACCAGTTCCCTTAAACACTATCGAACCCAGTAATGTTGATAATGGACCATCCTGTTCAACACAGGATAGTGAACTATCTGGCTTAGATGGTGTAGATAAACATTTTGTTCAAACTATATTCAGTATGATGCAGAAAGAAGAAACATTTTCTGGTCAGGTTAAATTGATGGAATGGATCTTGCAGATACAAAATTCTTCAGTTCTATGTTGGTATTATTCAAATTACTCATTTGATTGGGCGTCTGTTTTTTGTTTGTCTGTTTTATTTTTCTCTTCTTGTTTTGATATCCAGTTTCCTCATCCTGCTCTCTGTTTGGATTGTGTTAGGTTTTTGACTAAAGGTGGTGCTATTATTTTAGCAACTTGGTTAAGTCAAGCTGCTGCTGAAGAACAAACAAGTCTCCTTCATGTTATCCTTGAGGTAAGTGGAGCTCATTTGTACGTCTCCTATTTGGAAACAACTTTGTCTTAGAGCTTTTTAGCCATTCGATGCACAAATGAAAGTTTTTGGCTGACTTGCTTATGTCATATTCATTTAGCTTATGCATTATTATTATTGTGTTTCTGGTTGTGTATAGAGCTAACTTTTGAATTGCACATAACCTTAACGTTGCTTGTTTATTCATAAGTAATATCATTCTTCAAGTTCCCAACAATTTTGTTTTCCCAAGTTGAAGAAGTGATACCTGTAAATATTTTTTGATGGCTCTTGGTTCTTGACTCCATTTAAATTCCCCTCCCCCTGGATTAGAAAGTAGTTTGTAGCTTCCAACCAAGTGACCATGAAGACATTAAAGGAATTTTGTATTTAAATAAAGAAGCTCTGCATTACAAAGAATTGATTTTTATTATTATTTGCAGGTTTTTTGTCATTTGCCTTTACACAAGGCTCTTCCTGTACATATTTCAGCAATACTTCAAAGTGTTAATTACTTGCGATTTTACAGAACTTCAGGTACGATTTTGTTGTCTGGTGTTTCTTTTGTGCTATCTTTTCTGTTCTTTGTTGGGCAGTATCATTTATTGAACTACAAGTAGATATGTTCTTACATTAAACGCTCCAATTGGCAGCTTTTATGTGCATGTTAATTGCTTATTTCTCATCAAGGCAGATATGTTTTTTTGCTCACGTACATCTTAAATTACTTTATGTGGCCATTTGCTCACTTATCGAGTTTGTAGCCTTTTTACTTTTTATTGTAGGAGATAGAGGAGTTCCTTTGGGAATATTTGTTGCTATATTGCAATTCTTTTTTTGGTGGTTAATGAACTGATAATTTTGCTTCATATGGAAAATTTCCAACATCTGTGAGCTTCGGAATTTCTTTATTTGTTGCTATATTCTGCTCCTGTGAAATTTTTGAGTCTCATTTTCTGACTTGAAGATCAGACATATCAAACAGGGCAAGGTTTTTATTGTCAAGATGGAGCAAATTGTTGGCAAGATCTCAAGCATTAAAGAAACCCAATGGCATGAAACTTTTGACCAATTCACAAACAAATATGATTCTGAAACAGAGGCAAGTGCATATCTTTAACTTATCTATATGTTTGAGGAAATTAGTAACATTTGTCTCATCATGTAGTCATATTCTTTGCAGTATTGGAGACATCATGTCTGATGAATCATGGAAATCGAATATTGACATGCCTGTAAGTTATTTGGGCTATCTAGATTTAATTTTAGAAAAACTTTATAATGTTTTGGAATTTCAACAACTTTTTCTGCTGTACAGGAAAATTTTGTCACTTCAAACGTAAATGTAGATAACATGAGGTATGAATTTGATTAAATAGCCTCTAAATCCTCCAAAGTTATTGTTTCCTGCTGGCTACCGATTGTGTTTTCTTCTTTAGGAAACCAGAATCTCATCAAGCATTGAAACTTTTGCCGGCCTCTTCGGATGATTTGAATCGGAAGAATGTCCTAGGTTTATCTTCATCCAGTATCCTTGGAATAGGCTGTGTGACTTTTTATTTTTTTGTTTATTTTTTATTTCTAATGATTTACGTTGGCCAATCTGAGTATAGTTGAAGTGTATTTTTCCTTGCTAATGATGGAACCTTTCCATTTTGATTAAAAGGTCAAATACAGTAATTCGAAAGAAGAAACAAACTCAGAAATCTTGAATCAAACTATGGATACAAAGGGGATCATCTCCACAACAAACTAAACCAATTTGAATTACTAGAGCCCTTACAGAGCCAAAAGTCACCAAAAAGCTCTCCAGTTAGATTGGTAACAAAAGGAGTATAATTAGATAAACATTTAGTAAGAGAACAGAATGAAACTTTAGCCAACTTAAAGTATTCTTCCCATCCCAACTCTCCAATCACCAAGTTGGATAGTGTTGTCCACTAATTCTTTGTCTTTCCCAGAACCTTTGACCATACAATAGCTGTTAAATATGGCCTTCAGCCTCCTCACCAAAGACCCAGGATACCTGAAATTGTTGTCATTACTGTAGCAAAAGAAAGGTTCAAATGAAAGAACAGAAAAATAAAAGGGTTGTTTGGATGTATTTATTACAAACTATTTTGTAGGCTAATATTTTTAATTTTTTTAAAATTTTTTTCTTCTAGGTCCAATTTGAAGATCACCTTTTTCCAAGAGTAATGATACTATTCCCCAACTCCATAGATTGTTTGAATAAAACCTTTGGAATGTTTCTTATAAGAAGACCCAAAAAAAAAAAAACCCCATTCCCCAACTAACTAGACTGGTAATATATATTTTTTTCTTTTTCTTCTTCCTAAATATGGTCTCTTAACTTTCTTTTAAAGTTCAACACTATCGTCCTTGGGATACAAAAAAGGGACATCTCATGAGTTGGCCAGTTGGGAAACTAGAAAGTACTGGACAAGCCAAAGCCAAGCGTCTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTGAAATATTGAAAATTTTCAGTTCTCCAATTTCCTCAAAACTTTTTGTTCAATTCATTTCTACTTTCCGGAAATCAACCCGCTTCTGGGTCATGGATTTGTATACGCATGGAGGATATAATGTTTTCCTCTTGTGAGTCATTTAATTGGTTTTTGGTAAACCTGTTTTAGGGTTTTTATTCATTGTACTTGCCATTAGTTCAATACAAAATCTTGGGACTTTCATTTTATCATGTTGGGCATGAATTTTCTTATTAACGCTGTTGCTGTTTGATTGTTCCAAAGTAATTCTGAGTATATCGAAAAGATAAGATTTTCTTTGTTGGACTGTGGACATTATTGAATTATTTCTGACATCAATAATTAAAGGTTCACCTAACTAATAACGTTTTTGCATTGATCAGTCCATTTTGGTAAATGGAGAGTTTAAAGTTAATTTCCTTAGCTGGTTAATAGGATTCAGAGAACGCAGAAAAGTTCAGATGGTAGAACAGCCCGACCAGAAAATTGCTGGCAGGAATTCTCAGGCTCCAAGAACTTCTCCTGCGAGTCAAGGTCGGCCAATGTCTACTGATGATATTCAGAAAGCAAAAATGCGAGCACAATTCATGCAGAGCAAGTATGGGAAGACCGGTTCAACTAATGGACGTACGAATGTGAAGTCTGAGAATGTATATAAACCATTACATTTAGTTTCCGGTGCCTCGACCCCAGCATCTAAAGTCTCTCTTCTTCCCAAATTTGAGGACCAGAAAAAAGCTGTGCCGCTCTTTCCAAAGTGCAGTAATAAGGTCGAAACCCCACTTCATTCAAAGATTGAAATGGACTTCAAGGATTCGGTTGGGGAGAAATGTAAGAGGGTCCAGATCCAATGGCGGATGCCACCAGGTTCATTTTCTTCAACACTATGCTTCCTTTAATAGTATATATTTAATTTTAAAACGATATCATAGACATGGACCATGATTGAATGGGTTAAAAACTTGGAGATGCCACTTAGTTAGAAGCAATTATGTTGACTCGGTATATAAACACCACATTTAATGTCGACGCTCTGTTTTCCAGCAAACTAGACACAATACGGATATGTTGGTTACAAAATATATATATGTGTGTATATATATTAAACATTTCAATTTTGTCACATTACAAGTCGTCATATATGTAAGAGACAAGGAGTAAAAGATAAAAAAGATCATTGTTGACCCAGTGATCTTCCCAAAGATGAATAAAGTCCTACACCGAATTTTATGAAGTTGAGAAAGAGTCGGACTTCGGGAAACAGAATTTTATGGGCTACTGTAGTAAATATAATTGAAAACCATATTGGAACCCAGCTTTTGAAACGATGTCCAAACTTTTTCACAATAATCTTATGCCACAGAACACCACGCCGGACTCTAATGGAAAACATCACAAGGACAACCTTCTTTCAATCTATATTTCCAACCCCGTTACCTCCCTTTCCACAGTCGAGAAATATGAGCTTCTACAGTTGGCTCCAATTGGTTTTACAGTTGGCCATAGAGGAAGGGATTTTGTGAAGGGAGAGGAAATTGGTCAGGGTCATGGTCAGCAGACATTTCTTAATAATGATGACATTGCAAAATTTAAATGTCCTACAAAATAAATGAAGCTACCCAAGCAGAAAAGTCCTGTCATTCATAAAAGTTAGAGCCTCCTTTCCTCTCACTTAAGGATAAATTAGCTACTTCCAACGACCTCAAACATTCAAGCAAATTAAAGGTCTTTTTTTAACCGTGTTGTGGCTTCTCGTAAAAGAGATAAAAAGTGTATCTTAGTGCCTGGGTATCAACGAAAACTTCAAGATTATTTCAGACAAATACTGAGTCCTCTCTACGTTGTGCAGTTCTCTTGGTGTTCCCTCGTAGATTAGATTTACAAACAAGTAGGTTGTGTATTTTTCCTCGCAATTGGTTTCAAAGCCAATGCTGGGGGTATGGATAACCCCCCAACTTAAGGTTCATATGATCGATCATAGATAGAGATGCTCTGCCAAAGTCTAGGCCCTTATGGAGAAATTACCCTGCCCCGAATTAGTTTCTGTGCAACCTTCGTTTGTCTGAAAATTTGTTTTGAGACATTTTTCAAAACTTCTTTTTTTTGGTAGAGGTAACTGTTCTTGTTCTTGTTTTTGTTGTTCTTCTTTTTTTTATTATTTTTTTAAAAATTATTATTAGTAGTTTATTTAGACTTTTAGTAGTTTTTTTCATTAAAAATATTTGTATTTTAATAAACATTAGTCAGCATATTTATAGAAAATAAATTTCATATGTGATTATGATTTTTATTTTTTCTTATCGCTAAGGTGTTGTATAGAATGTTAAATTTGAAGTTATAATAATGAATAAGTGGAGTAATATTCTTGTTTCAATTAATAGGATTTTGGCGAAGCATAGCATGTGCTGGTGTCATTTCTGTGTCCATCAACACAATATGATATGGAACATGATGACATATCATTTTTAGATAAGGATATAGTTGGAAAACAATTCTTGAAATGTCATTTTTTAAATATGTACAAATAATTTTCTAGATAATATTTATACTTGATCTCATTGAAAGAGAATAGGTCTCCCCCACCACCCTTAGGTTATACTAGTAGACTCAATTAACGAACTTCACAGTTTTCCTTAAAAAAAAAAAAGGAGAAATAGATCCTGTATTATGAACGATTTTTGTACGTTAATTATATTCTTAGATGCACGTACTGCGGACATTTCTTTTTACTGTCAATCTGTTCTTAATTTTCCTTGAATCAAACAAAATTTGCGTCTGATAACCCGTCCAGGTGGGTATCCACATTCAAAACACGTATGAATGGAACTATAAGACATGTGACATCCAATTTCTTCATTCCATCAGATTTAGATGACAGCTGCAAGCTAATGGTATAAAAAAGAAACACAAAACTAATTCTAATGCATGGAGATTTTTATTTTGGCTTCTTTGTTTTCTCCCTCACTGAAATTATAAAAGGGTCTTTTTCACTAGTCACTCTACCCTCACTCGGCATACTTGCACTTGCACATTTCCTTGCAAATGGGCAGACCAGATTTCCAACCTTGCAAACGACCATGGAGAAAAAAAATACGGGGGTCGAAATCCTTAAAAATTAAATTGGAACGTTAACTGGAGCCATTTCTGTACTTACGTTTCTCCCTTTATTTATATTTCTCCCTTTATTTATATTTTTTAAGCTGGTGGCATTGGTTTCTGAAGAACTGTTTTTGTTAGTGGTCCAATACAAATGTTTATGTAGCATTTTGGACATATCTTCGTTATTTGGTGTTTGAGAACATTGCAAAAGCTTGTAGTTATCTGCAGGGAGTTGTATCAAGGTTTTTCTGTGATGGAATTTTTAGTTGTTTATTTATTTTTGAGAGTGTACAACTTTTATTCTTTCAAAGGACAACCCAAAAGAGATGGCAGATGTGATTCGTTTAGAAGCAAAAAATGGAAGAAATACTGCTTTATTCTATTGATCGTAGTGTATCAAAAAAAATATACACGTACTTTACTTTTATCAAGCAACTCATGATCTCATTTTATGCAGGAGGGTTGTCTTTGAGTTTTTCTCTTAGCTGTCCAAATTATTTAAAGACATCGAGTACAGGGGTCACTTGTCTGTAATAGTCATAGGGGGTGTTGTTTGGTGTGTGCATGGAAGGCATGTTATAAGCCAAATTTGCTGTGATGGAGGAGTAGAATTTTGTTACACTCGGGAATGGAAGTCTTAACGGTATCCCTAGATCTTGGCTGTGGCATCTTCAACAACCAGCTGATTAATCTCAACCCCTCCCTTGTAAAAAGGAAGACAACAACAATAAAAAAATCAGTCACGTTTTCTTAGTACAATGGACTGTGGTTATAATAATCTAGTTCCCTGCCGTAATTTTGAATATTTAGTGTGATTGAAACATATCTTGTACTTAAGTTTGAACTGGCTTATTTTCAATGTAGTACCATTTCGAATGAATAGAGCAGTGAAAGAAGCAAGAGAATCCCAAAATAGAGTTTTACTTTGGCAAAAACTGAAAATACAGGGAAATATGTGAAGTGGCCTCAACGTCTACGCAACAATATTAATTATGTTGCTCGCAGTTGAACTTCAATGACAGTGTATTGACAATAATAAATCTGATGAGTTACGGCTGTTTTGTTTGCTCTTGTGAACGTGTATATGCGAAGAACGTTCTGTCTATTAACAGACCGTCAAATGAAATGAACCACAGGTTTTTCTGTTTAGTAAAAGAAGTTAAAAACCGACTCAATTGTACTTTGAAGCGTTATTTCAATTCACCTGTTCTGTGCGATCAATAGTGTTATTTCAATTCACCTGTTCTGTGCGATCAATAGTTCAATCTACTTTCTTCATTATGTATCACGTATAACCACAATTCTCCTCAGTTTGGTGACAGTCTACTTAAATTTTTACTTTTGTCAATTCTCTGGTTTTACTTTGGTTTTATATGTTGTGTCCTGCTTATAATTTCACAGATAGCCTCAATTTTATTTCTATATATGCAGAAATGAAACTCAATGATCTCTGGAGAGTAGGTGGAGGAGAGAATAGTAAAGAAGCTGGATTCCAAAAAAATAGGAACTCTAGAGAGAAGGAGACTTTCTACCAGACCATCCTTGACATACCATCAAATCCCAAGGAGCCATGGGACCTTGAAATGGACTATGATGACTCTTTGACTCCTGAAATTCTGACTGAGCAATTGCCTGACAATGAAAATTCAGAAGCTGAGGTTCGTAACCATGTGGTGGATGCTGCTGTTCCGTCAGAGGTGATCTCATCTCAAGATCTCAAGCCAAATGCAGCTGAGCCAGATCTTGAATTGCTTGCTGTACTTTTGAAAAATCCAGAATTAGTTTATGCTCTCACTTCTAGCCAAGCTGGTAATTTGCCTACAGAGGAAACTGTAAAACTGTTGGATATGATTAAAGCAGGTGGGGCTAGTAATTTGGGCGGCGTTAACACGATGGAAAAGACTGTGGAGCAAGTTGAAGTCTCTCTTCCATCTCCAACTCCTTCAAGTAATGCTGGAACGGTGCGTGACTTAGGCTCATTTTGCTGCTGTTGCAAAAGTACATGCAAGAATGTTGCTTATATTTTGTGCCTGACAAGATTATTGTCCACTTCATCAAGTCAAACTTGGGGAGCAAATAGCACCTCTTTTTGTTTGTTTATTTGTTTCTGGCCCAATATTAATTTCAACCTCACCCCTATCCTACGTTTATGTGGTTGCGAGTCACATCAATGATTGTTGGGTCTTCCTTCACCTCTTATTTTCATGATGAATTGATATCGCTTGATCAAACTTATTAGTAGATTCTTATTTCTGAGTTTCCCACTCCATAGCGTCTTAGCTCTTGACAGGGATTCTGCTTTCTGAGCTTCTTCCCTCCCTCCATGAACCTTAATGCTTGCCTTGAATGCAAGTTTTTGGAACAAATTTTATTCATCAAACATTGAGACTGCAAACTTACTAAAAGTTATTTGAAAATTTAGTATTTGCTGATGATGGTTTTTTCCCCTTAAACTTACAGAGTGGATGGAAACCAGCAGTCTTGAGGAATCCTTTTTCACAGCGAGATTCCATTGCAGAAAGCAGAGTTGCACACTCTTCCCCACCAGTTGATACGTCAACCATTGCAGTGTCGCGTATTCCAGCCAACATTGTTACACCGAACCAACAACACGCAGCTATGCCACCAGTGTCCCACCAGCTTCCTGCATCAGTTTCTCAATTTTCACTTCCACAAACTATGATCAACGGGCGCCAATCCCATCACGTAGTTCACTCTCACCAACACCAACAGGGCGTCGTAAGTTCTAGTACTCCGAATGTTCAATTACCGAACTCGGAAATAGCCCTGGGATTAAGGAGTTTTCCTATCACCAATCAACCCGTAGTTAATCATTTAACTGCAGCTGCCTCGTCAGTGAGGATTGAAGGTCGGAATATTGTAAAACCTGTTTCTTTTACATCAAACACACCAGAAAGAATACCAATGTCATTCCAATCACCTCCATCCCCAACCCCTACACAAATGCCTCCAATTCAGCAGCAAAGGCAAGAGCCACAATTACAACCATTTCGGTCGGAGCATCCTCATCATCAAACTCGTGTAAATATCTCTTTACCACCCGCTGAGAAATCAGCCCCTAGTTTAGGTTCTTGGAGACCAAGGCAGCAGGATATTGGTTCTCATTATAACTCTGGAGCTAACCAAAATAATGACAGTAAATTTGTTGGAGGATCCATGGCGGCAGTAAGAGGAGGCCCTTCATGGGGGAGAAATGAATTTGAATCTTGGAGTCCTGAGAACAGTCCAGTAAGAACTCAGGAATACAACAGGCCTGACAAAAGCTTCACAGAGCCCAGAATCAATTCTGGACGAAGCTATGGGCCTGCTGACAACCAGCAGCAGAGACAAAGGAGTCCTTATGGATATAGAGATCAAAACAGACATGGAAACAGCAACAGAAGATGGCGTGATAGACAATATTGAAACTGTGAATTGTTGTTTGAGTAAGATGAGATTTCCTACTCACAAATGCTTGGTTTTGGCTGTTAAAATGGGCTTAAAAAACATTGAAAAGGAGGAGCCTCTTCCTATGAGAATTTGGGTTGAGATTGGTGTTCTTCTGTATTTTGCAAGTTTTTTATACTTTCAAGGCCCCCTCAAGAATGAAAAAAAATAACACAAATTCACGACGGCTGACTGTTACCAGGAGCATCCTTCTTCTTCTTCTTTTTCTTTTTTCTTTTTTTTTTCTTTTTTTTATTTTATTGGGGGGCTTTGGCTTTTGACCTGTAAAATTTAGTTTGAGGAGCTTGGGTTTGTAGGGGGGAAGGATTTCATTTTTCATATCAATTATTATTAGTGTTATTCTCTTGTCTTTGAACTATTTTCAATCCAACTTTGAAAGAGGCTTCGCCATTAGCTTGGCTTCAGCTAATTCTTAACTTC
mRNA sequence
CTCTTTCTCTCTCTCTCTCTCAATTCTCAAACCCTCTCTCCTCTTTCCTTAAGCTCTCTTATTATCAAATCCTTTTTACCTCGTTTCAGGCCCTAATTTATCCTTCGTTTTGAGGTTTTAATGCTTATTTTTTGTTCAATTTCGATTCAGAAATTCGAGATTTCTGGTCGACAATGGAGGTATTGAAGGATGATTCCTCCAATTTGGAGATTGGGACTTCGGTCGACTCGTTTCAGAAGTTTTTGGATTCCCAAAAGGATCTCTTTCGCTCCCAGGTCGATCAGCTCCAGACAATTGTCGTCACGCAGTGCAAACTCACTGGCGTCAACCCGCTCTCTCAAGAGATGGCTGCTGGGGCTTTGTCAATTACAATTGGAAAAAGACCCCGAGACCTGCTCAACCCCAAGGCTGTAAAGTATATGCAAACTGTTTTTTCTATTAAAGATGCACTTAGTAAGAAAGAATCTCGAGAAATCAGTGCCTTATTTGGTGTCAAAGTTACACAGGTCCGTGATTTTTTTAATAGCCAACGTTCAAGGGTGAGGAAACTAGTTCGTGTGTCACGGGAAAAATCCATCCAATCTAATTCTTGCAAACAACTTGAAGTTGGAGGGATTGCAACAAACAATGACCCCAGTATGCCAATTGATGCAGTTCCATTGAACTCTGATGCAGTGGTTCCTTTGAACTCTGTTGCACCAATTCCGTTGAACTCTGAAGCTCCAGTTCCTTTGAATTTTGATACACCAGTTCCCTTAAACACTATCGAACCCAGTAATGTTGATAATGGACCATCCTGTTCAACACAGGATAGTGAACTATCTGGCTTAGATGGTGTAGATAAACATTTTGTTCAAACTATATTCAGTATGATGCAGAAAGAAGAAACATTTTCTGGTCAGGTTAAATTGATGGAATGGATCTTGCAGATACAAAATTCTTCAGTTCTATGTTGGTATTATTCAAATTACTCATTTGATTGGGCGTCTGTTTTTTGTTTGTCTGTTTTATTTTTCTCTTCTTGTTTTGATATCCAGTTTCCTCATCCTGCTCTCTGTTTGGATTGTGTTAGGTTTTTGACTAAAGGTGGTGCTATTATTTTAGCAACTTGGTTAAGTCAAGCTGCTGCTGAAGAACAAACAAGTCTCCTTCATGTTATCCTTGAGAGCTTTTTAGCCATTCGATGCACAAATGAAAGTTTTTGGCTGACTTGCTTATGTCATATTCATTTAGCTTATGCATTATTATTATTGTGTTTCTGGTTGTGTATAGAGCTAACTTTTGAATTGCACATAACCTTAACGTTTTTTGTCATTTGCCTTTACACAAGGCTCTTCCTGTACATATTTCAGCAATACTTCAAAGTGTTAATTACTTGCGATTTTACAGAACTTCAGGAAAATTTTGTCACTTCAAACGTAAATGTAGATAACATGAGGAAACCAGAATCTCATCAAGCATTGAAACTTTTGCCGGCCTCTTCGGATGATTTGAATCGGAAGAATGTCCTAGGATTCAGAGAACGCAGAAAAGTTCAGATGGTAGAACAGCCCGACCAGAAAATTGCTGGCAGGAATTCTCAGGCTCCAAGAACTTCTCCTGCGAGTCAAGGTCGGCCAATGTCTACTGATGATATTCAGAAAGCAAAAATGCGAGCACAATTCATGCAGAGCAAGTATGGGAAGACCGGTTCAACTAATGGACGTACGAATGTGAAGTCTGAGAATGTATATAAACCATTACATTTAGTTTCCGGTGCCTCGACCCCAGCATCTAAAGTCTCTCTTCTTCCCAAATTTGAGGACCAGAAAAAAGCTGTGCCGCTCTTTCCAAAGTGCAGTAATAAGGTCGAAACCCCACTTCATTCAAAGATTGAAATGGACTTCAAGGATTCGGTTGGGGAGAAATGTAAGAGGGTCCAGATCCAATGGCGGATGCCACCAGCTTTTGAAACGATGTCCAAACTTTTTCACAATAATCTTATGCCACAGAACACCACGCCGGACTCTAATGGAAAACATCACAAGGACAACCTTCTTTCAATCTATATTTCCAACCCCGTTACCTCCCTTTCCACAGTCGAGAAATATGAGCTTCTACAGTTGGCTCCAATTGGTTTTACAGTTGGCCATAGAGGAAGGGATTTTGTGAAGGGAGAGGAAATTGGTCAGGGTCATGAAATGAAACTCAATGATCTCTGGAGAGTAGGTGGAGGAGAGAATAGTAAAGAAGCTGGATTCCAAAAAAATAGGAACTCTAGAGAGAAGGAGACTTTCTACCAGACCATCCTTGACATACCATCAAATCCCAAGGAGCCATGGGACCTTGAAATGGACTATGATGACTCTTTGACTCCTGAAATTCTGACTGAGCAATTGCCTGACAATGAAAATTCAGAAGCTGAGGTTCGTAACCATGTGGTGGATGCTGCTGTTCCGTCAGAGGTGATCTCATCTCAAGATCTCAAGCCAAATGCAGCTGAGCCAGATCTTGAATTGCTTGCTGTACTTTTGAAAAATCCAGAATTAGTTTATGCTCTCACTTCTAGCCAAGCTGGTAATTTGCCTACAGAGGAAACTGTAAAACTGTTGGATATGATTAAAGCAGGTGGGGCTAGTAATTTGGGCGGCGTTAACACGATGGAAAAGACTGTGGAGCAAGTTGAAGTCTCTCTTCCATCTCCAACTCCTTCAAGTAATGCTGGAACGAGTGGATGGAAACCAGCAGTCTTGAGGAATCCTTTTTCACAGCGAGATTCCATTGCAGAAAGCAGAGTTGCACACTCTTCCCCACCAGTTGATACGTCAACCATTGCAGTGTCGCGTATTCCAGCCAACATTGTTACACCGAACCAACAACACGCAGCTATGCCACCAGTGTCCCACCAGCTTCCTGCATCAGTTTCTCAATTTTCACTTCCACAAACTATGATCAACGGGCGCCAATCCCATCACGTAGTTCACTCTCACCAACACCAACAGGGCGTCGTAAGTTCTAGTACTCCGAATGTTCAATTACCGAACTCGGAAATAGCCCTGGGATTAAGGAGTTTTCCTATCACCAATCAACCCGTAGTTAATCATTTAACTGCAGCTGCCTCGTCAGTGAGGATTGAAGGTCGGAATATTGTAAAACCTGTTTCTTTTACATCAAACACACCAGAAAGAATACCAATGTCATTCCAATCACCTCCATCCCCAACCCCTACACAAATGCCTCCAATTCAGCAGCAAAGGCAAGAGCCACAATTACAACCATTTCGGTCGGAGCATCCTCATCATCAAACTCGTGTAAATATCTCTTTACCACCCGCTGAGAAATCAGCCCCTAGTTTAGGTTCTTGGAGACCAAGGCAGCAGGATATTGGTTCTCATTATAACTCTGGAGCTAACCAAAATAATGACAGTAAATTTGTTGGAGGATCCATGGCGGCAGTAAGAGGAGGCCCTTCATGGGGGAGAAATGAATTTGAATCTTGGAGTCCTGAGAACAGTCCAGTAAGAACTCAGGAATACAACAGGCCTGACAAAAGCTTCACAGAGCCCAGAATCAATTCTGGACGAAGCTATGGGCCTGCTGACAACCAGCAGCAGAGACAAAGGAGTCCTTATGGATATAGAGATCAAAACAGACATGGAAACAGCAACAGAAGATGGCGTGATAGACAATATTGAAACTGTGAATTGTTGTTTGAGTAAGATGAGATTTCCTACTCACAAATGCTTGGTTTTGGCTGTTAAAATGGGCTTAAAAAACATTGAAAAGGAGGAGCCTCTTCCTATGAGAATTTGGGTTGAGATTGGTGTTCTTCTGTATTTTGCAAGTTTTTTATACTTTCAAGGCCCCCTCAAGAATGAAAAAAAATAACACAAATTCACGACGGCTGACTGTTACCAGGAGCATCCTTCTTCTTCTTCTTTTTCTTTTTTCTTTTTTTTTTCTTTTTTTTATTTTATTGGGGGGCTTTGGCTTTTGACCTGTAAAATTTAGTTTGAGGAGCTTGGGTTTGTAGGGGGGAAGGATTTCATTTTTCATATCAATTATTATTAGTGTTATTCTCTTGTCTTTGAACTATTTTCAATCCAACTTTGAAAGAGGCTTCGCCATTAGCTTGGCTTCAGCTAATTCTTAACTTC
Coding sequence (CDS)
ATGGAGGTATTGAAGGATGATTCCTCCAATTTGGAGATTGGGACTTCGGTCGACTCGTTTCAGAAGTTTTTGGATTCCCAAAAGGATCTCTTTCGCTCCCAGGTCGATCAGCTCCAGACAATTGTCGTCACGCAGTGCAAACTCACTGGCGTCAACCCGCTCTCTCAAGAGATGGCTGCTGGGGCTTTGTCAATTACAATTGGAAAAAGACCCCGAGACCTGCTCAACCCCAAGGCTGTAAAGTATATGCAAACTGTTTTTTCTATTAAAGATGCACTTAGTAAGAAAGAATCTCGAGAAATCAGTGCCTTATTTGGTGTCAAAGTTACACAGGTCCGTGATTTTTTTAATAGCCAACGTTCAAGGGTGAGGAAACTAGTTCGTGTGTCACGGGAAAAATCCATCCAATCTAATTCTTGCAAACAACTTGAAGTTGGAGGGATTGCAACAAACAATGACCCCAGTATGCCAATTGATGCAGTTCCATTGAACTCTGATGCAGTGGTTCCTTTGAACTCTGTTGCACCAATTCCGTTGAACTCTGAAGCTCCAGTTCCTTTGAATTTTGATACACCAGTTCCCTTAAACACTATCGAACCCAGTAATGTTGATAATGGACCATCCTGTTCAACACAGGATAGTGAACTATCTGGCTTAGATGGTGTAGATAAACATTTTGTTCAAACTATATTCAGTATGATGCAGAAAGAAGAAACATTTTCTGGTCAGGTTAAATTGATGGAATGGATCTTGCAGATACAAAATTCTTCAGTTCTATGTTGGTATTATTCAAATTACTCATTTGATTGGGCGTCTGTTTTTTGTTTGTCTGTTTTATTTTTCTCTTCTTGTTTTGATATCCAGTTTCCTCATCCTGCTCTCTGTTTGGATTGTGTTAGGTTTTTGACTAAAGGTGGTGCTATTATTTTAGCAACTTGGTTAAGTCAAGCTGCTGCTGAAGAACAAACAAGTCTCCTTCATGTTATCCTTGAGAGCTTTTTAGCCATTCGATGCACAAATGAAAGTTTTTGGCTGACTTGCTTATGTCATATTCATTTAGCTTATGCATTATTATTATTGTGTTTCTGGTTGTGTATAGAGCTAACTTTTGAATTGCACATAACCTTAACGTTTTTTGTCATTTGCCTTTACACAAGGCTCTTCCTGTACATATTTCAGCAATACTTCAAAGTGTTAATTACTTGCGATTTTACAGAACTTCAGGAAAATTTTGTCACTTCAAACGTAAATGTAGATAACATGAGGAAACCAGAATCTCATCAAGCATTGAAACTTTTGCCGGCCTCTTCGGATGATTTGAATCGGAAGAATGTCCTAGGATTCAGAGAACGCAGAAAAGTTCAGATGGTAGAACAGCCCGACCAGAAAATTGCTGGCAGGAATTCTCAGGCTCCAAGAACTTCTCCTGCGAGTCAAGGTCGGCCAATGTCTACTGATGATATTCAGAAAGCAAAAATGCGAGCACAATTCATGCAGAGCAAGTATGGGAAGACCGGTTCAACTAATGGACGTACGAATGTGAAGTCTGAGAATGTATATAAACCATTACATTTAGTTTCCGGTGCCTCGACCCCAGCATCTAAAGTCTCTCTTCTTCCCAAATTTGAGGACCAGAAAAAAGCTGTGCCGCTCTTTCCAAAGTGCAGTAATAAGGTCGAAACCCCACTTCATTCAAAGATTGAAATGGACTTCAAGGATTCGGTTGGGGAGAAATGTAAGAGGGTCCAGATCCAATGGCGGATGCCACCAGCTTTTGAAACGATGTCCAAACTTTTTCACAATAATCTTATGCCACAGAACACCACGCCGGACTCTAATGGAAAACATCACAAGGACAACCTTCTTTCAATCTATATTTCCAACCCCGTTACCTCCCTTTCCACAGTCGAGAAATATGAGCTTCTACAGTTGGCTCCAATTGGTTTTACAGTTGGCCATAGAGGAAGGGATTTTGTGAAGGGAGAGGAAATTGGTCAGGGTCATGAAATGAAACTCAATGATCTCTGGAGAGTAGGTGGAGGAGAGAATAGTAAAGAAGCTGGATTCCAAAAAAATAGGAACTCTAGAGAGAAGGAGACTTTCTACCAGACCATCCTTGACATACCATCAAATCCCAAGGAGCCATGGGACCTTGAAATGGACTATGATGACTCTTTGACTCCTGAAATTCTGACTGAGCAATTGCCTGACAATGAAAATTCAGAAGCTGAGGTTCGTAACCATGTGGTGGATGCTGCTGTTCCGTCAGAGGTGATCTCATCTCAAGATCTCAAGCCAAATGCAGCTGAGCCAGATCTTGAATTGCTTGCTGTACTTTTGAAAAATCCAGAATTAGTTTATGCTCTCACTTCTAGCCAAGCTGGTAATTTGCCTACAGAGGAAACTGTAAAACTGTTGGATATGATTAAAGCAGGTGGGGCTAGTAATTTGGGCGGCGTTAACACGATGGAAAAGACTGTGGAGCAAGTTGAAGTCTCTCTTCCATCTCCAACTCCTTCAAGTAATGCTGGAACGAGTGGATGGAAACCAGCAGTCTTGAGGAATCCTTTTTCACAGCGAGATTCCATTGCAGAAAGCAGAGTTGCACACTCTTCCCCACCAGTTGATACGTCAACCATTGCAGTGTCGCGTATTCCAGCCAACATTGTTACACCGAACCAACAACACGCAGCTATGCCACCAGTGTCCCACCAGCTTCCTGCATCAGTTTCTCAATTTTCACTTCCACAAACTATGATCAACGGGCGCCAATCCCATCACGTAGTTCACTCTCACCAACACCAACAGGGCGTCGTAAGTTCTAGTACTCCGAATGTTCAATTACCGAACTCGGAAATAGCCCTGGGATTAAGGAGTTTTCCTATCACCAATCAACCCGTAGTTAATCATTTAACTGCAGCTGCCTCGTCAGTGAGGATTGAAGGTCGGAATATTGTAAAACCTGTTTCTTTTACATCAAACACACCAGAAAGAATACCAATGTCATTCCAATCACCTCCATCCCCAACCCCTACACAAATGCCTCCAATTCAGCAGCAAAGGCAAGAGCCACAATTACAACCATTTCGGTCGGAGCATCCTCATCATCAAACTCGTGTAAATATCTCTTTACCACCCGCTGAGAAATCAGCCCCTAGTTTAGGTTCTTGGAGACCAAGGCAGCAGGATATTGGTTCTCATTATAACTCTGGAGCTAACCAAAATAATGACAGTAAATTTGTTGGAGGATCCATGGCGGCAGTAAGAGGAGGCCCTTCATGGGGGAGAAATGAATTTGAATCTTGGAGTCCTGAGAACAGTCCAGTAAGAACTCAGGAATACAACAGGCCTGACAAAAGCTTCACAGAGCCCAGAATCAATTCTGGACGAAGCTATGGGCCTGCTGACAACCAGCAGCAGAGACAAAGGAGTCCTTATGGATATAGAGATCAAAACAGACATGGAAACAGCAACAGAAGATGGCGTGATAGACAATATTGA
Protein sequence
MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAAGALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQRSRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLNSEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETFSGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVRFLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLLLCFWLCIELTFELHITLTFFVICLYTRLFLYIFQQYFKVLITCDFTELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLGFRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYGKTGSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVETPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDNLLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGGGENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNENSEAEVRNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTEETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQRDSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTMINGRQSHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVRIEGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSEHPHHQTRVNISLPPAEKSAPSLGSWRPRQQDIGSHYNSGANQNNDSKFVGGSMAAVRGGPSWGRNEFESWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADNQQQRQRSPYGYRDQNRHGNSNRRWRDRQY
Homology
BLAST of Lsi02G023700 vs. ExPASy Swiss-Prot
Match:
Q38796 (Homeobox protein LUMINIDEPENDENS OS=Arabidopsis thaliana OX=3702 GN=LD PE=1 SV=2)
HSP 1 Score: 460.7 bits (1184), Expect = 5.0e-128
Identity = 391/1086 (36.00%), Postives = 548/1086 (50.46%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
M+ K++ +EIG+SV+S + LDSQK LF SQ+DQLQ +VV QCKLTGVNPL+QEMAA
Sbjct: 1 MDAFKEE---IEIGSSVESLMELLDSQKVLFHSQIDQLQDVVVAQCKLTGVNPLAQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSI IGKRPRDLLNPKAVKY+Q VF+IKDA+SK+ESREISALFG+ V QVR+FF +Q+
Sbjct: 61 GALSIKIGKRPRDLLNPKAVKYLQAVFAIKDAISKRESREISALFGITVAQVREFFVTQK 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
+RVRK VR+SREK + SN+ ++ D VP N++A N V P+PLN
Sbjct: 121 TRVRKQVRLSREKVVMSNT--------------HALQDDGVPENNNAT---NHVEPVPLN 180
Query: 181 SEAP--VPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEE 240
S P +++ + I P ++ S S DK+FV+ IFS+++KEE
Sbjct: 181 SIHPEACSISWGEGETVALIPPEDIPPDISDS------------DKYFVENIFSLLRKEE 240
Query: 241 TFSGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDC 300
TFSGQVKLMEWI+QIQ++SVL W
Sbjct: 241 TFSGQVKLMEWIMQIQDASVLIW------------------------------------- 300
Query: 301 VRFLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYA-- 360
FL+KGG +IL TWLSQAA+EEQTS+L +IL+ LCH+ L A
Sbjct: 301 --FLSKGGVLILTTWLSQAASEEQTSVLLLILK---------------VLCHLPLHKASP 360
Query: 361 ---------LLLLCFWLCIELTFELHITLTFFVICLYTRLFLYI------------FQQY 420
+ L F+ +++ L+ +T+LF I
Sbjct: 361 ENMSAILQSVNGLRFYRISDISNRAKGLLS-----RWTKLFAKIQAMKKQNRNSSQIDSQ 420
Query: 421 FKVLITCDFTEL-------QENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLGF 480
++L+ E+ ++ SN +N+R+ ES Q KLL S+DD +K++LG
Sbjct: 421 SQLLLKQSIAEIMGDSSNPEDILSLSNGKSENVRRIESSQGPKLLLTSADDSTKKHMLGS 480
Query: 481 -----RERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYG 540
+ERRKVQMVEQP QK AG++ Q R + + RPMS DDIQKAKMRA +MQSK
Sbjct: 481 NPSYNKERRKVQMVEQPGQKAAGKSPQTVRIGTSGRSRPMSADDIQKAKMRALYMQSKNS 540
Query: 541 KTG---STNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVE 600
K S G + + + KPL L S +P P+ + +
Sbjct: 541 KKDPLPSAIGDSKIVAPE--KPLALHSAKDSP-----------------PIQNNEAKTED 600
Query: 601 TPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDN 660
TP+ S ++ S + + + L P N D
Sbjct: 601 TPVLSTVQPVNGFSTIQPVNGPSAVQPVNGPLAVQPVNGPSALQPVNGPSAVIVPVQADE 660
Query: 661 LLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGG 720
I P T ++ + + T+ + + G M+L++LWRV
Sbjct: 661 -----IKKPSTPPKSISSKVGVMMKMSSQTILKNCKRKQIDWHVPPG--MELDELWRVAA 720
Query: 721 GENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNEN 780
G NSKEA Q+NRN RE+ET YQ++ IP NPKEPWD EMDYDDSLTPEI ++Q P+
Sbjct: 721 GGNSKEADVQRNRNRRERETTYQSLQTIPLNPKEPWDREMDYDDSLTPEIPSQQPPEESL 780
Query: 781 SE----AEVRNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGN 840
+E + R AA S +SS EPDLELLA LLKNP+LVYALTS + N
Sbjct: 781 TEPQDSLDERRIAAGAATTSSSLSS-------PEPDLELLAALLKNPDLVYALTSGKPSN 840
Query: 841 LPTEETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNP 900
L ++ VKLLD+IK G ++ N ++ E+VEVSLPSPTPS+N G SGW +RNP
Sbjct: 841 LAGQDMVKLLDVIKTGAPNSSSSSN--KQVEERVEVSLPSPTPSTNPGMSGWGQEGIRNP 900
Query: 901 FSQRDSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLP 960
FS+++ + + VA S + ++ + T Q P ++ +++
Sbjct: 901 FSRQNQVG-TAVARSGTQLRVGSMQWHQ------TNEQSIPRHAPSAYSNSITLAHTERE 945
Query: 961 QTMINGRQSHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQP-------VVN 1020
Q + HH +H Q QQ +S+++ V+ P ++ G S + Q N
Sbjct: 961 QQQYMQPKLHHNLHFQQQQQQPISTTSYAVREPVGQMGTGTSSSWRSQQSQNSYYSHQEN 945
Query: 1021 HLTAAASSVRIEGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPF 1036
+ +A+ +G + + S+ P S + PS M + Q+Q+ +
Sbjct: 1021 EIASASQVTSYQGNS-----QYMSSNPGYESWSPDNSPSRNQLNM---RGQQQQASRKHD 945
BLAST of Lsi02G023700 vs. ExPASy TrEMBL
Match:
A0A0A0K948 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G394710 PE=4 SV=1)
HSP 1 Score: 1583.2 bits (4098), Expect = 0.0e+00
Identity = 902/1212 (74.42%), Postives = 952/1212 (78.55%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIG+S DSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDFSNLEIGSSFDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVR+FFNSQR
Sbjct: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVREFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVRVSRE+SIQSNSCKQLEVGGIATNNDPS+PIDAVPLNSDAVVPLNS AP+PLN
Sbjct: 121 SRVRKLVRVSRERSIQSNSCKQLEVGGIATNNDPSIPIDAVPLNSDAVVPLNSDAPMPLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPL FDTPVPLNTIEPSNVDNGPSCSTQDSELSG+DGVDKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLYFDTPVPLNTIEPSNVDNGPSCSTQDSELSGIDGVDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLL- 360
FLTKGGAIILATWLSQAAAEEQTSLL+VILE F CH+ L AL +
Sbjct: 301 FLTKGGAIILATWLSQAAAEEQTSLLYVILEVF---------------CHLPLHKALPVH 360
Query: 361 ----------LCFWLCIELTFELHITLTFFVICLYTRLFL---------------YIFQQ 420
L F+ +++ I L+ + L L I +Q
Sbjct: 361 ISAILQSVNYLRFYRTSDISNRARILLSRWSKLLARSQALKKPNGVKLLTNVQTDMILKQ 420
Query: 421 YFKVLITCDF----TELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLG--- 480
+++ + ++ ENFVTSNVN DNMRKPESHQ LKLLPASSDDLNRKNVLG
Sbjct: 421 SIGDIMSDESWRSNMDMPENFVTSNVNADNMRKPESHQTLKLLPASSDDLNRKNVLGLSS 480
Query: 481 --FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYGKT 540
FRERRKVQMVEQPDQKIAGRNSQA R+SPASQGRPMSTDDIQKAKMRAQFMQ+KYGKT
Sbjct: 481 SRFRERRKVQMVEQPDQKIAGRNSQAQRSSPASQGRPMSTDDIQKAKMRAQFMQNKYGKT 540
Query: 541 GSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVETPLHS 600
G++NGRT VKS NV KPLH+VSGAS+PASKVSLLPKFEDQKKAV LFPK +NKVETPLHS
Sbjct: 541 GASNGRTVVKSVNVNKPLHIVSGASSPASKVSLLPKFEDQKKAVALFPKFNNKVETPLHS 600
Query: 601 KIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDNLLSIY 660
KIEMDFKDS+GEKCKRVQIQWRMPP
Sbjct: 601 KIEMDFKDSLGEKCKRVQIQWRMPP----------------------------------- 660
Query: 661 ISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGGGENSK 720
EMKLNDLWRVG GENSK
Sbjct: 661 -------------------------------------------EMKLNDLWRVGDGENSK 720
Query: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNENSEAEV 780
EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNE+SEAEV
Sbjct: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNESSEAEV 780
Query: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTEETVKL 840
RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAG+LPTEETV+L
Sbjct: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGSLPTEETVQL 840
Query: 841 LDMIK-AGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQRDSIA 900
LDMIK AGGASNLGGV MEKTVE+VEVSLPSPTPSSNAGTSGWKPA LRNPFSQRDSIA
Sbjct: 841 LDMIKAAGGASNLGGVTRMEKTVEKVEVSLPSPTPSSNAGTSGWKPAALRNPFSQRDSIA 900
Query: 901 ESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTMINGRQ 960
ESRVA SSPPVDTS+IAVSR IVTPNQQH AMPPVSHQLPASVSQFS QTMING Q
Sbjct: 901 ESRVALSSPPVDTSSIAVSR----IVTPNQQHTAMPPVSHQLPASVSQFSHSQTMINGCQ 960
Query: 961 SHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVRIEGRN 1020
SHHV+HSHQHQQ +V+S PNVQ N E AL LR FPI NQP+VNHLT AASS RIEGR+
Sbjct: 961 SHHVIHSHQHQQSIVNS--PNVQ--NPETALPLRGFPINNQPLVNHLTPAASSARIEGRS 1020
Query: 1021 IVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSE----HPHHQTRV 1080
IVKP SFTSN PERIP+SFQSPPSPTPTQMPPIQQQRQ+PQLQPFRSE HPHHQTRV
Sbjct: 1021 IVKP-SFTSNIPERIPISFQSPPSPTPTQMPPIQQQRQQPQLQPFRSEHPHLHPHHQTRV 1071
Query: 1081 NISLPPAEKSAPSLGSWRPRQQDIGSHYN---SGANQNNDSKFVGGSMAAVRGGPSWGRN 1140
NISLPPAEKSAPSLGSWRPRQQDI S YN + ANQNNDSKFVGGSM RGGPSWGR+
Sbjct: 1081 NISLPPAEKSAPSLGSWRPRQQDISSQYNNSGASANQNNDSKFVGGSMGVGRGGPSWGRS 1071
Query: 1141 EFESWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADN---QQQRQRSPYGYRDQNRH 1167
+FESWSPENSPVR QEYNRPDK F+EPRINSGRSYGP DN QQQRQRSPYGY +QNR+
Sbjct: 1141 DFESWSPENSPVRNQEYNRPDKGFSEPRINSGRSYGPIDNNQQQQQRQRSPYGYGEQNRY 1071
BLAST of Lsi02G023700 vs. ExPASy TrEMBL
Match:
A0A1S3BRZ1 (homeobox protein LUMINIDEPENDENS OS=Cucumis melo OX=3656 GN=LOC103492850 PE=4 SV=1)
HSP 1 Score: 1578.1 bits (4085), Expect = 0.0e+00
Identity = 903/1214 (74.38%), Postives = 950/1214 (78.25%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIGTS DSFQKFLDSQKDLFRSQVDQLQ+IVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDFSNLEIGTSFDSFQKFLDSQKDLFRSQVDQLQSIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSI IGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR
Sbjct: 61 GALSIAIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVRVSREKSIQSNSCKQLEVGGI TNNDPS+PIDAVPLN+DAVVPLN+ AP+PLN
Sbjct: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIVTNNDPSIPIDAVPLNTDAVVPLNADAPMPLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSG+DGVDKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGIDGVDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLL- 360
FLTKGGAIILATWLSQAAAEEQTSLL+VILE F CH+ L AL +
Sbjct: 301 FLTKGGAIILATWLSQAAAEEQTSLLYVILEVF---------------CHLPLHKALPVH 360
Query: 361 ----------LCFWLCIELTFELHITLTFFVICLYTRLFL---------------YIFQQ 420
L F+ +++ I L+ + L L I +Q
Sbjct: 361 ISAILQSVNYLRFYRTSDISNRARILLSRWSKLLARSQALKKPNGVKLLTNAQTDMILKQ 420
Query: 421 YFKVLITCDF----TELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLG--- 480
+++ + ++ ENFVTS+VN DNMRKPESHQALKLLPASSDDLNRKNVLG
Sbjct: 421 SIGDIMSDESWRSNIDMPENFVTSDVNADNMRKPESHQALKLLPASSDDLNRKNVLGLSS 480
Query: 481 --FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYGKT 540
FRERRKVQMVEQPDQKIAGRNSQA R SPASQGRPMSTDDIQKAKMRAQFMQ+KYGKT
Sbjct: 481 SRFRERRKVQMVEQPDQKIAGRNSQAQRPSPASQGRPMSTDDIQKAKMRAQFMQNKYGKT 540
Query: 541 GSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVETPLHS 600
G++NGRT VKS NV KPLH+VSGAS+PASKVSLLPKFEDQKKAV LFPK +NKVETPLHS
Sbjct: 541 GASNGRTVVKSVNVNKPLHIVSGASSPASKVSLLPKFEDQKKAVALFPKITNKVETPLHS 600
Query: 601 KIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDNLLSIY 660
KIEMDFKDS+GEKCK+VQIQWRMPP
Sbjct: 601 KIEMDFKDSLGEKCKKVQIQWRMPP----------------------------------- 660
Query: 661 ISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGGGENSK 720
EMKLNDLWRVG GENSK
Sbjct: 661 -------------------------------------------EMKLNDLWRVGDGENSK 720
Query: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNENSEAEV 780
EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNE+SEAEV
Sbjct: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNESSEAEV 780
Query: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTEETVKL 840
RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAG+LPTEETV+L
Sbjct: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGSLPTEETVQL 840
Query: 841 LDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQRDSIAE 900
LDMIKAGGA NLGGV MEKTVE+VEVSLPSPTPSSNAGTSGWKPA LRNPFSQRDSIAE
Sbjct: 841 LDMIKAGGAGNLGGVTRMEKTVEKVEVSLPSPTPSSNAGTSGWKPAALRNPFSQRDSIAE 900
Query: 901 SRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTMINGRQS 960
SRVA SSPPVDTS+IA SR IVTPNQQH A PPVSHQLPASVSQ+S QTMING QS
Sbjct: 901 SRVALSSPPVDTSSIAASR----IVTPNQQHTA-PPVSHQLPASVSQYSHSQTMINGCQS 960
Query: 961 HHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVRIEGRNI 1020
HHV+HSHQHQQGVV+S PNVQ N E AL LR FPI NQP+VNHLT+AASS RIEGRNI
Sbjct: 961 HHVIHSHQHQQGVVNS--PNVQ--NPETALPLRGFPINNQPLVNHLTSAASSARIEGRNI 1020
Query: 1021 VKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSE----HPHHQTRVN 1080
VKP SFTSN PERIPMSFQSPPSPTPTQMPPIQQQRQ+PQLQPFRSE HPHHQTRVN
Sbjct: 1021 VKP-SFTSNIPERIPMSFQSPPSPTPTQMPPIQQQRQQPQLQPFRSEHPLLHPHHQTRVN 1072
Query: 1081 ISLPPAEKSAPSLGSWRPRQQDIGSHYNS---GANQNNDSKFVGGSMAAV--RGGPSWGR 1140
ISLPPAEKSAPSLGSWRPRQQDI SHYN+ ANQNNDSKFVGG V GGPSWGR
Sbjct: 1081 ISLPPAEKSAPSLGSWRPRQQDISSHYNNSGVSANQNNDSKFVGGGSMGVGRGGGPSWGR 1072
Query: 1141 NEFESWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADN---QQQRQRSPYGY-RDQN 1167
NEFESWSPENSPVR QEYNRPDK F+EPRINSGRSYGP DN QQQRQRSPYGY R+QN
Sbjct: 1141 NEFESWSPENSPVRNQEYNRPDKGFSEPRINSGRSYGPIDNNQQQQQRQRSPYGYNREQN 1072
BLAST of Lsi02G023700 vs. ExPASy TrEMBL
Match:
A0A6J1GNX5 (homeobox protein LUMINIDEPENDENS-like OS=Cucurbita moschata OX=3662 GN=LOC111456139 PE=4 SV=1)
HSP 1 Score: 1515.0 bits (3921), Expect = 0.0e+00
Identity = 863/1207 (71.50%), Postives = 923/1207 (76.47%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIG S +SFQKFLDSQKDLFRSQVDQLQ IVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDLSNLEIGNSAESFQKFLDSQKDLFRSQVDQLQRIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKV QVRDFFNSQR
Sbjct: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVR+SREKSIQS+SCKQLE G IA +NDPSMPIDAVPLNS AVVP NS API LN
Sbjct: 121 SRVRKLVRLSREKSIQSSSCKQLEAGRIAIDNDPSMPIDAVPLNSAAVVPFNSDAPIQLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPLN DTPVPLNTI+PSNVDNGPSCSTQDSELSG+DG+DKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLNIDTPVPLNTIKPSNVDNGPSCSTQDSELSGIDGIDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLLL 360
FLTKGGAIILATWLSQAAAEEQTSLLHVILE F CH+ L AL
Sbjct: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILEVF---------------CHLPLHKALP-- 360
Query: 361 CFWLCIELTFELHITLTFFVICLYTRLFLYIFQQYFKV--------------LITCDFTE 420
+ I + L F+ + ++ ++ K+ L+T T+
Sbjct: 361 ---VHISAILQSVNNLRFYRTSDISNRARFLLSRWSKLLTRSQALKKPNGMKLLTNSQTD 420
Query: 421 L---------------------QENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNV 480
+ ENF +S VNVDN RK E QALKLLPASSDDL+RKNV
Sbjct: 421 MILKQSIGDIMYDESWKSNIDVPENFSSSIVNVDNTRKLEPRQALKLLPASSDDLHRKNV 480
Query: 481 LG-----FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQS 540
LG FRERRK+QMVEQP+QK RNSQAPRTSP S+GRPMSTDDIQKAKMRAQFMQS
Sbjct: 481 LGLSSSRFRERRKIQMVEQPEQKSTARNSQAPRTSPVSRGRPMSTDDIQKAKMRAQFMQS 540
Query: 541 KYGKTGSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVE 600
KYGKTGS+NGR +KSENV KPL LVSGA +PA K SL PKFEDQKKA+ L PK SNKVE
Sbjct: 541 KYGKTGSSNGR--MKSENVNKPLPLVSGALSPAPKTSLHPKFEDQKKAMVLSPKISNKVE 600
Query: 601 TPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDN 660
TPLHSKIE+ FKDS+GEKCKRVQIQWRMPP
Sbjct: 601 TPLHSKIEVGFKDSLGEKCKRVQIQWRMPP------------------------------ 660
Query: 661 LLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGG 720
EMK NDLWRVGG
Sbjct: 661 ------------------------------------------------EMKHNDLWRVGG 720
Query: 721 GENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNEN 780
GENSKEAGFQ RNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPE+LTEQLPDNE+
Sbjct: 721 GENSKEAGFQNIRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEVLTEQLPDNES 780
Query: 781 SEAEVRNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTE 840
SE EVRNHVVDAAVPSEVISSQD K NA EPDLELLAVLLKNPELVYALTSSQAGNLP E
Sbjct: 781 SETEVRNHVVDAAVPSEVISSQDPKSNADEPDLELLAVLLKNPELVYALTSSQAGNLPAE 840
Query: 841 ETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQR 900
ETVKLLDMIKA GA+NLG VN MEK VE+VEVSLPSPTPSSNAGTSGWKPA LRNPFSQR
Sbjct: 841 ETVKLLDMIKASGANNLGSVNRMEKAVEKVEVSLPSPTPSSNAGTSGWKPAALRNPFSQR 900
Query: 901 DSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTMI 960
DSIAESRVA +SPPVD S+IAVSR+ PNQQHAAMP VSHQLPASVSQFSLPQTMI
Sbjct: 901 DSIAESRVALASPPVDASSIAVSRV------PNQQHAAMPSVSHQLPASVSQFSLPQTMI 960
Query: 961 NGRQSHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVRI 1020
NGRQSHHV+HSHQHQQG+V+S PNVQLPNSEIAL LRSFPITN+P+VN LTAA SSVR+
Sbjct: 961 NGRQSHHVLHSHQHQQGIVNS--PNVQLPNSEIALALRSFPITNEPLVNQLTAAVSSVRV 1020
Query: 1021 EGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSEHPHHQTRV 1080
EG N+VKPV+F SN PER+P+SF SPPSPTPT+MP IQQQRQ+ Q+QPFRSEHP HQTRV
Sbjct: 1021 EGGNVVKPVTFASNIPERVPISFHSPPSPTPTRMPLIQQQRQQSQIQPFRSEHP-HQTRV 1057
Query: 1081 NISLPPAEKSAPSLGSWRPRQQDIGSHYNSGANQNNDSKFVGGSMAAVRGGPSWGRNEFE 1140
NISLPP+EKSAPSLGSW+PRQQDIGSHYNSG NQ +DSKFVGGSMAA RGGPSWGRNEFE
Sbjct: 1081 NISLPPSEKSAPSLGSWKPRQQDIGSHYNSGTNQRSDSKFVGGSMAA-RGGPSWGRNEFE 1057
Query: 1141 SWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADNQQQRQRSPYGYRDQNRHG-NSNR 1167
SWSPENSPVRTQEY+RPDKS +EPR NSGRSYGPAD QQQRQRSPYGY++QNRHG N+NR
Sbjct: 1141 SWSPENSPVRTQEYSRPDKSISEPRTNSGRSYGPAD-QQQRQRSPYGYQEQNRHGTNNNR 1057
BLAST of Lsi02G023700 vs. ExPASy TrEMBL
Match:
A0A6J1JT12 (homeobox protein LUMINIDEPENDENS-like OS=Cucurbita maxima OX=3661 GN=LOC111488078 PE=4 SV=1)
HSP 1 Score: 1513.0 bits (3916), Expect = 0.0e+00
Identity = 861/1207 (71.33%), Postives = 920/1207 (76.22%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIG S +SFQKFLDSQKDLFRSQVDQLQ IVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDLSNLEIGNSAESFQKFLDSQKDLFRSQVDQLQRIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKV QVRDFFNSQR
Sbjct: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVR+SREKSIQS+SCKQLE GGIA +NDPSMPIDAVPLNS AVVP NS API LN
Sbjct: 121 SRVRKLVRLSREKSIQSSSCKQLEAGGIAIDNDPSMPIDAVPLNSAAVVPFNSDAPIQLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPLN DTPVPLNTI+PSNVDNGPSCSTQDSELSG+DG+DKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLNIDTPVPLNTIKPSNVDNGPSCSTQDSELSGIDGIDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLLL 360
FLTKGGAIILATWLSQAAAEEQTSLLHVILE F CH+ L AL
Sbjct: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILEVF---------------CHLPLHKALP-- 360
Query: 361 CFWLCIELTFELHITLTFFVICLYTRLFLYIFQQYFKVL--------------------- 420
+ I T + L F+ + ++ ++ K+L
Sbjct: 361 ---VHISATLQSVNNLRFYRTSDISNRARFLLSRWSKLLTRSQALKKPNGMKLLTNSQTD 420
Query: 421 ---------ITCDFT-----ELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNV 480
I CD + ++ ENF +S VNVDN RK ESHQALKLLPAS+DDL+RKNV
Sbjct: 421 TILKQSIGDIICDESWKLNIDVPENFSSSIVNVDNTRKLESHQALKLLPASADDLHRKNV 480
Query: 481 LG-----FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQS 540
LG FRERRK+QMVEQP+QK RN QAPRTSP S+GRPMSTDDIQKAKMRAQFMQS
Sbjct: 481 LGLSSSRFRERRKIQMVEQPEQKSTARNLQAPRTSPVSRGRPMSTDDIQKAKMRAQFMQS 540
Query: 541 KYGKTGSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVE 600
KYGKTGS+NGR +KSENV KPL LVSGA +PA K SL PKFEDQKKA+ L PK SNKVE
Sbjct: 541 KYGKTGSSNGR--MKSENVNKPLPLVSGALSPAPKTSLHPKFEDQKKAMVLSPKISNKVE 600
Query: 601 TPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDN 660
TPLHSKIE+ FKDS+GEKCKRVQIQWRMPP
Sbjct: 601 TPLHSKIEVGFKDSLGEKCKRVQIQWRMPP------------------------------ 660
Query: 661 LLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGG 720
EMK NDLWRVGG
Sbjct: 661 ------------------------------------------------EMKHNDLWRVGG 720
Query: 721 GENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNEN 780
GENSKEAGFQ RNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPE+LTEQLPDNE+
Sbjct: 721 GENSKEAGFQNIRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEVLTEQLPDNES 780
Query: 781 SEAEVRNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTE 840
SE EVRNHVVDAAVPSEVISSQD KPNA EPDLELLAVLLKNPELVYALTSSQAGNLP E
Sbjct: 781 SETEVRNHVVDAAVPSEVISSQDPKPNADEPDLELLAVLLKNPELVYALTSSQAGNLPAE 840
Query: 841 ETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQR 900
ETVKLLDMIKA GASNLG VN MEK VE+VEVSLPSPTPSSNAGTSGWKPA LRNPFSQR
Sbjct: 841 ETVKLLDMIKASGASNLGSVNRMEKAVEKVEVSLPSPTPSSNAGTSGWKPAALRNPFSQR 900
Query: 901 DSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTMI 960
DSIAESRVA +SPPVD S+IAVSR+ PNQQHAAMP VSHQLPASVSQFSLPQTMI
Sbjct: 901 DSIAESRVALASPPVDASSIAVSRV------PNQQHAAMPSVSHQLPASVSQFSLPQTMI 960
Query: 961 NGRQSHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVRI 1020
NGRQSHH+VHSHQHQQ +V + PNVQLPN EI L LRSFPITN+P+VN LTAA SSVR+
Sbjct: 961 NGRQSHHIVHSHQHQQVIV--NPPNVQLPNPEIGLALRSFPITNEPLVNQLTAAVSSVRV 1020
Query: 1021 EGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSEHPHHQTRV 1080
EG N+VKPV+F SN PER+P+SF SPPSPTPT+MP IQQQRQ+ Q+QPFRSEHP HQTRV
Sbjct: 1021 EGGNVVKPVTFASNIPERVPISFHSPPSPTPTRMPLIQQQRQQSQIQPFRSEHP-HQTRV 1057
Query: 1081 NISLPPAEKSAPSLGSWRPRQQDIGSHYNSGANQNNDSKFVGGSMAAVRGGPSWGRNEFE 1140
NISLPP+EKSAPSLGSW+PRQQDIGSHYNSG NQ ND KFVG SM A RGGPSWGRNEFE
Sbjct: 1081 NISLPPSEKSAPSLGSWKPRQQDIGSHYNSGTNQRNDRKFVGESMTA-RGGPSWGRNEFE 1057
Query: 1141 SWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADNQQQRQRSPYGYRDQNRHG-NSNR 1167
SWSPENSPVRTQEY+R DKS +EPR NSGRSYGPAD QQQRQRSPYGY++QNRHG N+NR
Sbjct: 1141 SWSPENSPVRTQEYSRLDKSISEPRTNSGRSYGPAD-QQQRQRSPYGYQEQNRHGTNNNR 1057
BLAST of Lsi02G023700 vs. ExPASy TrEMBL
Match:
A0A6J1H884 (homeobox protein LUMINIDEPENDENS-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460969 PE=4 SV=1)
HSP 1 Score: 1422.1 bits (3680), Expect = 0.0e+00
Identity = 826/1210 (68.26%), Postives = 894/1210 (73.88%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEV+KDD SNLEIGTSV+SFQKFLDSQ DLFRSQVDQLQ +VVTQCKLTG NPLSQEMAA
Sbjct: 1 MEVVKDDFSNLEIGTSVESFQKFLDSQNDLFRSQVDQLQRVVVTQCKLTGANPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKV QVRDFFNSQR
Sbjct: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVR+SRE+SIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDA+VPLNS APIPLN
Sbjct: 121 SRVRKLVRLSRERSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDALVPLNSDAPIPLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPLNF TPVPLNTIEPSNVDNGPSCSTQDS+LS +DG+DKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLNFATPVPLNTIEPSNVDNGPSCSTQDSKLSDIDGIDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLLL 360
FLTK GAIILATWLSQAAAEEQTSLLHVILE F CH+ L AL
Sbjct: 301 FLTKDGAIILATWLSQAAAEEQTSLLHVILEVF---------------CHLPLHKALP-- 360
Query: 361 CFWLCIELTFELHITLTFFVICLYTRLFLYIFQQYFKVL--------------------- 420
+ I + L F+ + ++ ++ K+L
Sbjct: 361 ---MHISAILQSVNNLRFYRTSDISNRARFLISRWSKLLIRSQALKKPNGMKLLTNSQTD 420
Query: 421 ---------ITCDFT-----ELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNV 480
IT D + ++ ENF +VNVDNMRK E+HQALKLLPASSDD NRKNV
Sbjct: 421 MILKQSIGGITSDESWKSNIDIPENFGNPSVNVDNMRKSETHQALKLLPASSDDSNRKNV 480
Query: 481 LG-----FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQS 540
LG FRERRKVQMVEQP+QK+AGRN QAPRT PASQGRPMSTDDIQKAKMRAQFMQS
Sbjct: 481 LGLSSSRFRERRKVQMVEQPEQKVAGRNLQAPRT-PASQGRPMSTDDIQKAKMRAQFMQS 540
Query: 541 KYGKTGSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVE 600
KYGKTG +NGRT+ KSENV KPLH S AS+PASK+SL PKFEDQKKA+ L PK SNKVE
Sbjct: 541 KYGKTGLSNGRTHTKSENVNKPLH--SSASSPASKISLRPKFEDQKKAMVLLPKNSNKVE 600
Query: 601 TPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDN 660
TPLHSKIE++FKDS+GEKCKRVQIQWRMPP
Sbjct: 601 TPLHSKIEVEFKDSLGEKCKRVQIQWRMPP------------------------------ 660
Query: 661 LLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGG 720
EMK NDLWRVGG
Sbjct: 661 ------------------------------------------------EMKFNDLWRVGG 720
Query: 721 GENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNEN 780
G+NSKEAGFQKNRNSREKETFY+TIL+IP NPKEPWDLEMDYDDSLTPEILTEQLPDNE+
Sbjct: 721 GDNSKEAGFQKNRNSREKETFYKTILEIPPNPKEPWDLEMDYDDSLTPEILTEQLPDNES 780
Query: 781 SEAEVRNHVVDAAVPSEVISSQDLKPNAA--EPDLELLAVLLKNPELVYALTSSQAGNLP 840
SE E+RN VVD AVPSEVISSQDLKPNAA EPDLELLAVLLKNPELVYALTSSQAGNLP
Sbjct: 781 SEPEIRNCVVDGAVPSEVISSQDLKPNAAADEPDLELLAVLLKNPELVYALTSSQAGNLP 840
Query: 841 TEETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFS 900
+ETVKLLDMIKAG A+ GVN ME T+E+VEVSLPSPTPSS+AGTSGWKPAV +NPFS
Sbjct: 841 AQETVKLLDMIKAGVAN---GVNGMETTLEKVEVSLPSPTPSSDAGTSGWKPAVFKNPFS 900
Query: 901 QRDSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQT 960
QRDSIAESRVA SPPVDTS+IAVSR+ PPVS QLPASVSQFSLPQT
Sbjct: 901 QRDSIAESRVALPSPPVDTSSIAVSRV--------------PPVSQQLPASVSQFSLPQT 960
Query: 961 MINGRQSHHVVHS--HQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAAS 1020
MIN Q HVVHS HQHQQGV++ PNV+LPNSE+AL RSFPIT P+VN TAAAS
Sbjct: 961 MINRLQHDHVVHSHQHQHQQGVLN---PNVRLPNSEVALASRSFPITKLPLVNQSTAAAS 1020
Query: 1021 SVRIEGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSEHPHH 1080
SVRI+G N KPVSF S+T ER+P+SFQSPPSPTPT+MPPIQQQRQ+PQLQP+RSEHP H
Sbjct: 1021 SVRIDGGNDTKPVSFASSTLERVPISFQSPPSPTPTRMPPIQQQRQQPQLQPYRSEHP-H 1037
Query: 1081 QTRVNISLPPAEKSAPSLGSWRPRQQDIGSHYNSGANQNNDSKFVGGSMAAVRGGPSWGR 1140
QTRVNIS AEKSAP LGSWRPR QDIGSHYNSG NN+SK+VGG MA GGPSWGR
Sbjct: 1081 QTRVNISSSSAEKSAPGLGSWRPRLQDIGSHYNSGGKHNNESKYVGGPMAGRGGGPSWGR 1037
Query: 1141 NEFESWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADNQQQRQRSPYGYRDQNRHGN 1167
NEFESWSPENSPVRTQEY+RP RSYG A+ QQ++ SPYGY +QNRHGN
Sbjct: 1141 NEFESWSPENSPVRTQEYSRP-----------ARSYGAAE-QQRQSSSPYGYGEQNRHGN 1037
BLAST of Lsi02G023700 vs. NCBI nr
Match:
XP_038876754.1 (homeobox protein LUMINIDEPENDENS [Benincasa hispida])
HSP 1 Score: 1638.6 bits (4242), Expect = 0.0e+00
Identity = 920/1206 (76.29%), Postives = 960/1206 (79.60%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIGTSVDSF +FLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDFSNLEIGTSVDSFHRFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR
Sbjct: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVRVSREK+IQSNSCKQLEVGG+ATNNDPSMPIDAVPLNSDAV PLNS PIPLN
Sbjct: 121 SRVRKLVRVSREKAIQSNSCKQLEVGGVATNNDPSMPIDAVPLNSDAVFPLNSDVPIPLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPLNFD PVPLNTI+PSNVDNGPSCSTQDSELSG+DGVDK FVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLNFDAPVPLNTIDPSNVDNGPSCSTQDSELSGIDGVDKDFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLL- 360
FLTKGGAIILATWLSQAAAEEQTSLLHVILE F CH+ L AL +
Sbjct: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILEVF---------------CHLPLHKALPVH 360
Query: 361 ----------LCFWLCIELTFELHITLTFFVICLYTRLFL---------------YIFQQ 420
L F+ +++ L+ + L L I +Q
Sbjct: 361 ISPILQSVNYLRFYRTSDISNRARFLLSRWSKLLARSQALKKPNGVKLLTNSHTDMILKQ 420
Query: 421 YFKVLITCDF----TELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLG--- 480
+++ + ++ ENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLG
Sbjct: 421 SIGDIMSDESWKSNIDMPENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLGLSS 480
Query: 481 --FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYGKT 540
FRERRKVQMVEQPDQKIAGRNSQ PRTSPASQGRPMSTDDIQKAKMRAQFMQSKYGKT
Sbjct: 481 SRFRERRKVQMVEQPDQKIAGRNSQVPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYGKT 540
Query: 541 GSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVETPLHS 600
GS+NGR NVKS NV KPLHLVS A PASKVSLLP FEDQKKAV LFPK SNKVETPL S
Sbjct: 541 GSSNGRPNVKSANVNKPLHLVSAALPPASKVSLLPNFEDQKKAVALFPKFSNKVETPLRS 600
Query: 601 KIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDNLLSIY 660
KIE +FKDS+GEKCKRVQIQWRMPP
Sbjct: 601 KIETEFKDSLGEKCKRVQIQWRMPP----------------------------------- 660
Query: 661 ISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGGGENSK 720
EMKLNDLWRVGGGENSK
Sbjct: 661 -------------------------------------------EMKLNDLWRVGGGENSK 720
Query: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNENSEAEV 780
EAGFQKNRNSREKETFYQTILDIPSNPKEPWD+EMDYDDSLTPEILTEQLPDNE+SEAEV
Sbjct: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDVEMDYDDSLTPEILTEQLPDNESSEAEV 780
Query: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTEETVKL 840
RNHVVDAAVPSEVISSQD+KPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTEETVKL
Sbjct: 781 RNHVVDAAVPSEVISSQDVKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTEETVKL 840
Query: 841 LDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQRDSIAE 900
LDMIKAGGASNLGG N M KTVE+VEVSLPSPTPSSNAGTSGWKPAVLRNPFSQRDS+AE
Sbjct: 841 LDMIKAGGASNLGGANRMGKTVEKVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQRDSVAE 900
Query: 901 SRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTMINGRQS 960
SRVA SSPPVDTS+IAVSR IVTPNQQH AMPPVSHQ+PASVSQFSLPQTMING QS
Sbjct: 901 SRVALSSPPVDTSSIAVSR----IVTPNQQHGAMPPVSHQIPASVSQFSLPQTMINGCQS 960
Query: 961 HHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVRIEGRNI 1020
HHVVHS HQQG+ ++PNVQLPNSEIAL RSFPITNQP++NH+TAAASS RIEGRNI
Sbjct: 961 HHVVHS--HQQGI---NSPNVQLPNSEIALASRSFPITNQPLINHITAAASSARIEGRNI 1020
Query: 1021 VKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSEHPH-HQTRVNISL 1080
VKPVSFTSNTPERIP+SFQSPPSPTPTQMPPIQQQRQ+PQLQPFRSEHPH HQTRVNISL
Sbjct: 1021 VKPVSFTSNTPERIPISFQSPPSPTPTQMPPIQQQRQQPQLQPFRSEHPHLHQTRVNISL 1065
Query: 1081 PPAEKSAPSLGSWRPRQQDIG----SHYNSGANQNNDSKFVGGSMAAVRGGPSWGRNEFE 1140
PPAEKSAPSLGSWRPRQQDIG SHYNSGANQNNDSKFVGGSMAAVRGGPSWGRNEFE
Sbjct: 1081 PPAEKSAPSLGSWRPRQQDIGSQTSSHYNSGANQNNDSKFVGGSMAAVRGGPSWGRNEFE 1065
Query: 1141 SWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADNQQQRQRSPYGYRDQNRHGNSNRR 1167
SWSPENSPVRTQEYNRPDKSF EPRINSGRSYGP D QQQRQRSPYGYR+QNRHGN+NRR
Sbjct: 1141 SWSPENSPVRTQEYNRPDKSFIEPRINSGRSYGPVDQQQQRQRSPYGYREQNRHGNNNRR 1065
BLAST of Lsi02G023700 vs. NCBI nr
Match:
XP_011659347.1 (homeobox protein LUMINIDEPENDENS isoform X1 [Cucumis sativus] >KGN44902.1 hypothetical protein Csa_016414 [Cucumis sativus])
HSP 1 Score: 1583.2 bits (4098), Expect = 0.0e+00
Identity = 902/1212 (74.42%), Postives = 952/1212 (78.55%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIG+S DSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDFSNLEIGSSFDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVR+FFNSQR
Sbjct: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVREFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVRVSRE+SIQSNSCKQLEVGGIATNNDPS+PIDAVPLNSDAVVPLNS AP+PLN
Sbjct: 121 SRVRKLVRVSRERSIQSNSCKQLEVGGIATNNDPSIPIDAVPLNSDAVVPLNSDAPMPLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPL FDTPVPLNTIEPSNVDNGPSCSTQDSELSG+DGVDKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLYFDTPVPLNTIEPSNVDNGPSCSTQDSELSGIDGVDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLL- 360
FLTKGGAIILATWLSQAAAEEQTSLL+VILE F CH+ L AL +
Sbjct: 301 FLTKGGAIILATWLSQAAAEEQTSLLYVILEVF---------------CHLPLHKALPVH 360
Query: 361 ----------LCFWLCIELTFELHITLTFFVICLYTRLFL---------------YIFQQ 420
L F+ +++ I L+ + L L I +Q
Sbjct: 361 ISAILQSVNYLRFYRTSDISNRARILLSRWSKLLARSQALKKPNGVKLLTNVQTDMILKQ 420
Query: 421 YFKVLITCDF----TELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLG--- 480
+++ + ++ ENFVTSNVN DNMRKPESHQ LKLLPASSDDLNRKNVLG
Sbjct: 421 SIGDIMSDESWRSNMDMPENFVTSNVNADNMRKPESHQTLKLLPASSDDLNRKNVLGLSS 480
Query: 481 --FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYGKT 540
FRERRKVQMVEQPDQKIAGRNSQA R+SPASQGRPMSTDDIQKAKMRAQFMQ+KYGKT
Sbjct: 481 SRFRERRKVQMVEQPDQKIAGRNSQAQRSSPASQGRPMSTDDIQKAKMRAQFMQNKYGKT 540
Query: 541 GSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVETPLHS 600
G++NGRT VKS NV KPLH+VSGAS+PASKVSLLPKFEDQKKAV LFPK +NKVETPLHS
Sbjct: 541 GASNGRTVVKSVNVNKPLHIVSGASSPASKVSLLPKFEDQKKAVALFPKFNNKVETPLHS 600
Query: 601 KIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDNLLSIY 660
KIEMDFKDS+GEKCKRVQIQWRMPP
Sbjct: 601 KIEMDFKDSLGEKCKRVQIQWRMPP----------------------------------- 660
Query: 661 ISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGGGENSK 720
EMKLNDLWRVG GENSK
Sbjct: 661 -------------------------------------------EMKLNDLWRVGDGENSK 720
Query: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNENSEAEV 780
EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNE+SEAEV
Sbjct: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNESSEAEV 780
Query: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTEETVKL 840
RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAG+LPTEETV+L
Sbjct: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGSLPTEETVQL 840
Query: 841 LDMIK-AGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQRDSIA 900
LDMIK AGGASNLGGV MEKTVE+VEVSLPSPTPSSNAGTSGWKPA LRNPFSQRDSIA
Sbjct: 841 LDMIKAAGGASNLGGVTRMEKTVEKVEVSLPSPTPSSNAGTSGWKPAALRNPFSQRDSIA 900
Query: 901 ESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTMINGRQ 960
ESRVA SSPPVDTS+IAVSR IVTPNQQH AMPPVSHQLPASVSQFS QTMING Q
Sbjct: 901 ESRVALSSPPVDTSSIAVSR----IVTPNQQHTAMPPVSHQLPASVSQFSHSQTMINGCQ 960
Query: 961 SHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVRIEGRN 1020
SHHV+HSHQHQQ +V+S PNVQ N E AL LR FPI NQP+VNHLT AASS RIEGR+
Sbjct: 961 SHHVIHSHQHQQSIVNS--PNVQ--NPETALPLRGFPINNQPLVNHLTPAASSARIEGRS 1020
Query: 1021 IVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSE----HPHHQTRV 1080
IVKP SFTSN PERIP+SFQSPPSPTPTQMPPIQQQRQ+PQLQPFRSE HPHHQTRV
Sbjct: 1021 IVKP-SFTSNIPERIPISFQSPPSPTPTQMPPIQQQRQQPQLQPFRSEHPHLHPHHQTRV 1071
Query: 1081 NISLPPAEKSAPSLGSWRPRQQDIGSHYN---SGANQNNDSKFVGGSMAAVRGGPSWGRN 1140
NISLPPAEKSAPSLGSWRPRQQDI S YN + ANQNNDSKFVGGSM RGGPSWGR+
Sbjct: 1081 NISLPPAEKSAPSLGSWRPRQQDISSQYNNSGASANQNNDSKFVGGSMGVGRGGPSWGRS 1071
Query: 1141 EFESWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADN---QQQRQRSPYGYRDQNRH 1167
+FESWSPENSPVR QEYNRPDK F+EPRINSGRSYGP DN QQQRQRSPYGY +QNR+
Sbjct: 1141 DFESWSPENSPVRNQEYNRPDKGFSEPRINSGRSYGPIDNNQQQQQRQRSPYGYGEQNRY 1071
BLAST of Lsi02G023700 vs. NCBI nr
Match:
XP_008451616.1 (PREDICTED: homeobox protein LUMINIDEPENDENS [Cucumis melo])
HSP 1 Score: 1578.1 bits (4085), Expect = 0.0e+00
Identity = 903/1214 (74.38%), Postives = 950/1214 (78.25%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIGTS DSFQKFLDSQKDLFRSQVDQLQ+IVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDFSNLEIGTSFDSFQKFLDSQKDLFRSQVDQLQSIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSI IGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR
Sbjct: 61 GALSIAIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVRVSREKSIQSNSCKQLEVGGI TNNDPS+PIDAVPLN+DAVVPLN+ AP+PLN
Sbjct: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIVTNNDPSIPIDAVPLNTDAVVPLNADAPMPLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSG+DGVDKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGIDGVDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLL- 360
FLTKGGAIILATWLSQAAAEEQTSLL+VILE F CH+ L AL +
Sbjct: 301 FLTKGGAIILATWLSQAAAEEQTSLLYVILEVF---------------CHLPLHKALPVH 360
Query: 361 ----------LCFWLCIELTFELHITLTFFVICLYTRLFL---------------YIFQQ 420
L F+ +++ I L+ + L L I +Q
Sbjct: 361 ISAILQSVNYLRFYRTSDISNRARILLSRWSKLLARSQALKKPNGVKLLTNAQTDMILKQ 420
Query: 421 YFKVLITCDF----TELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLG--- 480
+++ + ++ ENFVTS+VN DNMRKPESHQALKLLPASSDDLNRKNVLG
Sbjct: 421 SIGDIMSDESWRSNIDMPENFVTSDVNADNMRKPESHQALKLLPASSDDLNRKNVLGLSS 480
Query: 481 --FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYGKT 540
FRERRKVQMVEQPDQKIAGRNSQA R SPASQGRPMSTDDIQKAKMRAQFMQ+KYGKT
Sbjct: 481 SRFRERRKVQMVEQPDQKIAGRNSQAQRPSPASQGRPMSTDDIQKAKMRAQFMQNKYGKT 540
Query: 541 GSTNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVETPLHS 600
G++NGRT VKS NV KPLH+VSGAS+PASKVSLLPKFEDQKKAV LFPK +NKVETPLHS
Sbjct: 541 GASNGRTVVKSVNVNKPLHIVSGASSPASKVSLLPKFEDQKKAVALFPKITNKVETPLHS 600
Query: 601 KIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDNLLSIY 660
KIEMDFKDS+GEKCK+VQIQWRMPP
Sbjct: 601 KIEMDFKDSLGEKCKKVQIQWRMPP----------------------------------- 660
Query: 661 ISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGGGENSK 720
EMKLNDLWRVG GENSK
Sbjct: 661 -------------------------------------------EMKLNDLWRVGDGENSK 720
Query: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNENSEAEV 780
EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNE+SEAEV
Sbjct: 721 EAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNESSEAEV 780
Query: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPTEETVKL 840
RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAG+LPTEETV+L
Sbjct: 781 RNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGSLPTEETVQL 840
Query: 841 LDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQRDSIAE 900
LDMIKAGGA NLGGV MEKTVE+VEVSLPSPTPSSNAGTSGWKPA LRNPFSQRDSIAE
Sbjct: 841 LDMIKAGGAGNLGGVTRMEKTVEKVEVSLPSPTPSSNAGTSGWKPAALRNPFSQRDSIAE 900
Query: 901 SRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTMINGRQS 960
SRVA SSPPVDTS+IA SR IVTPNQQH A PPVSHQLPASVSQ+S QTMING QS
Sbjct: 901 SRVALSSPPVDTSSIAASR----IVTPNQQHTA-PPVSHQLPASVSQYSHSQTMINGCQS 960
Query: 961 HHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVRIEGRNI 1020
HHV+HSHQHQQGVV+S PNVQ N E AL LR FPI NQP+VNHLT+AASS RIEGRNI
Sbjct: 961 HHVIHSHQHQQGVVNS--PNVQ--NPETALPLRGFPINNQPLVNHLTSAASSARIEGRNI 1020
Query: 1021 VKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSE----HPHHQTRVN 1080
VKP SFTSN PERIPMSFQSPPSPTPTQMPPIQQQRQ+PQLQPFRSE HPHHQTRVN
Sbjct: 1021 VKP-SFTSNIPERIPMSFQSPPSPTPTQMPPIQQQRQQPQLQPFRSEHPLLHPHHQTRVN 1072
Query: 1081 ISLPPAEKSAPSLGSWRPRQQDIGSHYNS---GANQNNDSKFVGGSMAAV--RGGPSWGR 1140
ISLPPAEKSAPSLGSWRPRQQDI SHYN+ ANQNNDSKFVGG V GGPSWGR
Sbjct: 1081 ISLPPAEKSAPSLGSWRPRQQDISSHYNNSGVSANQNNDSKFVGGGSMGVGRGGGPSWGR 1072
Query: 1141 NEFESWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADN---QQQRQRSPYGY-RDQN 1167
NEFESWSPENSPVR QEYNRPDK F+EPRINSGRSYGP DN QQQRQRSPYGY R+QN
Sbjct: 1141 NEFESWSPENSPVRNQEYNRPDKGFSEPRINSGRSYGPIDNNQQQQQRQRSPYGYNREQN 1072
BLAST of Lsi02G023700 vs. NCBI nr
Match:
KAG7014383.1 (Homeobox protein LUMINIDEPENDENS [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1530.8 bits (3962), Expect = 0.0e+00
Identity = 864/1170 (73.85%), Postives = 919/1170 (78.55%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIG S +SFQKFLDSQKDLFRSQVDQLQ IVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDLSNLEIGNSAESFQKFLDSQKDLFRSQVDQLQRIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKV QVRDFFNSQR
Sbjct: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVR+SREKSIQS+SCKQLE GGIA +NDPSMPIDAVPLNS AVVP NS API LN
Sbjct: 121 SRVRKLVRLSREKSIQSSSCKQLEAGGIAIDNDPSMPIDAVPLNSAAVVPFNSDAPIQLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPLN DTPVPLNTI+PSNVDNGPSCSTQDSELSG+DG+DKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLNIDTPVPLNTIKPSNVDNGPSCSTQDSELSGIDGIDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLLL 360
FLTKGGAIILATWLSQAAAEEQTSLLHVILE F CH+ L AL
Sbjct: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILEVF---------------CHLPLHKALP-- 360
Query: 361 CFWLCIELTFELHITLTFF---VICLYTRLFLYIFQQYFKVLITCDFTELQENFVTSNVN 420
+ I + L F+ I + ++ + +K I ++ ENF +S VN
Sbjct: 361 ---VHISAILQSVNNLRFYRTSDISNRASIGDIMYDESWKSNI-----DVPENFSSSIVN 420
Query: 421 VDNMRKPESHQALKLLPASSDDLNRKNVLGFRERRKVQMVEQPDQKIAGRNSQAPRTSPA 480
VDN RK E HQALKLLPASSDDL+RKNVLGFRERRK+QMVEQP+QK RNSQAPRTSP
Sbjct: 421 VDNTRKLEPHQALKLLPASSDDLHRKNVLGFRERRKIQMVEQPEQKSTARNSQAPRTSPV 480
Query: 481 SQGRPMSTDDIQKAKMRAQFMQSKYGKTGSTNGRTNVKSENVYKPLHLVSGASTPASKVS 540
S+GRPMSTDDIQKAKMRAQFMQSKYGKTGS+NGR +KSENV KPL LVSGAS+PA K S
Sbjct: 481 SRGRPMSTDDIQKAKMRAQFMQSKYGKTGSSNGR--MKSENVNKPLPLVSGASSPAPKTS 540
Query: 541 LLPKFEDQKKAVPLFPKCSNKVETPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSK 600
L PKFEDQKKA+ L PK SNKVETPLHSKIE+ FKDS+GEKCKRVQIQWRMPP
Sbjct: 541 LHPKFEDQKKAMVLSPKISNKVETPLHSKIEVGFKDSLGEKCKRVQIQWRMPP------- 600
Query: 601 LFHNNLMPQNTTPDSNGKHHKDNLLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRD 660
Sbjct: 601 ------------------------------------------------------------ 660
Query: 661 FVKGEEIGQGHEMKLNDLWRVGGGENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWD 720
EMK NDLWRVGGGENSKEAGFQ RNSREKETFYQTILDIPSNPKEPWD
Sbjct: 661 -----------EMKHNDLWRVGGGENSKEAGFQNIRNSREKETFYQTILDIPSNPKEPWD 720
Query: 721 LEMDYDDSLTPEILTEQLPDNENSEAEVRNHVVDAAVPSEVISSQDLKPNAAEPDLELLA 780
LEMDYDDSLTPE+LTEQLPDNE+SE EVRNHVVDAAVPSEVISSQD K NA EPDLELLA
Sbjct: 721 LEMDYDDSLTPEVLTEQLPDNESSETEVRNHVVDAAVPSEVISSQDPKSNADEPDLELLA 780
Query: 781 VLLKNPELVYALTSSQAGNLPTEETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSP 840
VLLKNPELVYALTSSQAGNLP EETVKLLDMIKA GASNLG VN MEK VE+VEVSLPSP
Sbjct: 781 VLLKNPELVYALTSSQAGNLPAEETVKLLDMIKASGASNLGSVNRMEKAVEKVEVSLPSP 840
Query: 841 TPSSNAGTSGWKPAVLRNPFSQRDSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHA 900
TPSSNAGTSGWKPA LRNPFSQRDSIAE RVA +S PVD S+IAVSR PNQQHA
Sbjct: 841 TPSSNAGTSGWKPAALRNPFSQRDSIAEGRVALASLPVDASSIAVSRF------PNQQHA 900
Query: 901 AMPPVSHQLPASVSQFSLPQTMINGRQSHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGL 960
AMP SHQLPASVSQFSLPQTMINGRQSHHV+HSHQHQQG+V+S PNVQLPNSEIAL L
Sbjct: 901 AMPSASHQLPASVSQFSLPQTMINGRQSHHVLHSHQHQQGIVNS--PNVQLPNSEIALAL 960
Query: 961 RSFPITNQPVVNHLTAAASSVRIEGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPI 1020
RSFPITN+P+VN LTAA SSVR+EG N+VKPV+F SN PER+P+SF SPPSPTPT+MP I
Sbjct: 961 RSFPITNEPLVNQLTAAVSSVRVEGGNVVKPVTFASNIPERVPISFHSPPSPTPTRMPLI 1015
Query: 1021 QQQRQEPQLQPFRSEHPHHQTRVNISLPPAEKSAPSLGSWRPRQQDIGSHYNSGANQNND 1080
QQQRQ+ Q+QPFRSEHP HQTRVNISLPP+EKSAPSLGSW+PRQQDIGSHYNSG NQ ND
Sbjct: 1021 QQQRQQSQIQPFRSEHP-HQTRVNISLPPSEKSAPSLGSWKPRQQDIGSHYNSGTNQRND 1015
Query: 1081 SKFVGGSMAAVRGGPSWGRNEFESWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADN 1140
SKFVGGSMAA RGGPSWGRNEFESWSPENSPVRTQEY+RPDKS +EPR NSGRSYGPAD
Sbjct: 1081 SKFVGGSMAA-RGGPSWGRNEFESWSPENSPVRTQEYSRPDKSISEPRTNSGRSYGPAD- 1015
Query: 1141 QQQRQRSPYGYRDQNRHG-NSNRRWRDRQY 1167
QQQRQRSPYGY++QNRHG N+NRRWRDRQ+
Sbjct: 1141 QQQRQRSPYGYQEQNRHGTNNNRRWRDRQF 1015
BLAST of Lsi02G023700 vs. NCBI nr
Match:
XP_023548067.1 (homeobox protein LUMINIDEPENDENS-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 867/1208 (71.77%), Postives = 926/1208 (76.66%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
MEVLKDD SNLEIG S +SFQKFLDSQKDLFRSQVDQLQ IVVTQCKLTGVNPLSQEMAA
Sbjct: 1 MEVLKDDLSNLEIGNSAESFQKFLDSQKDLFRSQVDQLQRIVVTQCKLTGVNPLSQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKV QVRDFFNSQR
Sbjct: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVAQVRDFFNSQR 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
SRVRKLVR+SREKSIQS+SCKQLE GGIA +NDPSMPIDAVPLNS AVVP NS API LN
Sbjct: 121 SRVRKLVRLSREKSIQSSSCKQLEAGGIAIDNDPSMPIDAVPLNSAAVVPFNSDAPIQLN 180
Query: 181 SEAPVPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEETF 240
SEAPVPLN DTPVPLNTI+PSNVDNGPSCSTQDSELSG+DG+DKHFVQTIFSMMQKEETF
Sbjct: 181 SEAPVPLNIDTPVPLNTIKPSNVDNGPSCSTQDSELSGIDGIDKHFVQTIFSMMQKEETF 240
Query: 241 SGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDCVR 300
SGQVKLMEWILQIQNSSVLCW
Sbjct: 241 SGQVKLMEWILQIQNSSVLCW--------------------------------------- 300
Query: 301 FLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYALLLL 360
FLTKGGAIILATWLSQAA EEQTSLLHVILE F CH+ L AL
Sbjct: 301 FLTKGGAIILATWLSQAAVEEQTSLLHVILEVF---------------CHLPLHKALP-- 360
Query: 361 CFWLCIELTFELHITLTFFVICLYTRLFLYIFQQYFKV--------------LITCDFT- 420
+ I + L F+ + ++ ++ K+ L+T T
Sbjct: 361 ---VHISAILQSVNNLRFYRTSDISNRARFLLSRWSKLLTRSQALKKPNGMKLLTNSQTD 420
Query: 421 --------------------ELQENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNV 480
++ ENF +S VNVDN RK ESHQALKLLPASSDDL+RKNV
Sbjct: 421 TILKQSIGDIMYDESWKSNIDVPENFSSSIVNVDNTRKLESHQALKLLPASSDDLHRKNV 480
Query: 481 LG-----FRERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQS 540
LG FRERRK+QMVEQP+QK RNSQAPRTSP S+GRPMSTDDIQKAKMRAQFMQS
Sbjct: 481 LGLSSSRFRERRKIQMVEQPEQKSTARNSQAPRTSPVSRGRPMSTDDIQKAKMRAQFMQS 540
Query: 541 KYGKTGSTNGRTNVKSENVYKPLHLVSGASTPASKVSLL-PKFEDQKKAVPLFPKCSNKV 600
KYGKTGS+NGR +KSENV KPL LVSGAS+ A K + L PKFEDQKKA+ L PK SNKV
Sbjct: 541 KYGKTGSSNGR--MKSENVNKPLPLVSGASSAAPKTTFLHPKFEDQKKAMVLSPKISNKV 600
Query: 601 ETPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKD 660
ETPLHSKIE+ FKDS+GEKCKRVQIQWRMPP
Sbjct: 601 ETPLHSKIEVGFKDSLGEKCKRVQIQWRMPP----------------------------- 660
Query: 661 NLLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVG 720
EMK NDLWRVG
Sbjct: 661 -------------------------------------------------EMKHNDLWRVG 720
Query: 721 GGENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNE 780
GGENSKEAGFQ RNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPE+LTEQLPDNE
Sbjct: 721 GGENSKEAGFQNIRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEVLTEQLPDNE 780
Query: 781 NSEAEVRNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGNLPT 840
+SE EVRNHVVDAAVPSEVISSQD KPNA EPDLELLAVLLKNPELVYALTSSQAGNLP
Sbjct: 781 SSETEVRNHVVDAAVPSEVISSQDPKPNADEPDLELLAVLLKNPELVYALTSSQAGNLPA 840
Query: 841 EETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNPFSQ 900
EETVKLLDMIKA GASNLG VN MEK VE+VEVSLPSPTPSSNAGTSGWKPA LRNPFSQ
Sbjct: 841 EETVKLLDMIKASGASNLGSVNRMEKAVEKVEVSLPSPTPSSNAGTSGWKPAALRNPFSQ 900
Query: 901 RDSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLPQTM 960
RDSIAESRVA +SPPVD S+IAVSR+ PNQQHAAMP VSHQLPASVSQFSLPQTM
Sbjct: 901 RDSIAESRVALASPPVDASSIAVSRV------PNQQHAAMPSVSHQLPASVSQFSLPQTM 960
Query: 961 INGRQSHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQPVVNHLTAAASSVR 1020
INGRQSHHV+HSHQHQQG+V+S PNVQLPNSEIAL LRSFPITN+P+VN LTAA SSVR
Sbjct: 961 INGRQSHHVLHSHQHQQGIVNS--PNVQLPNSEIALALRSFPITNEPLVNQLTAAVSSVR 1020
Query: 1021 IEGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPFRSEHPHHQTR 1080
+EG N+VKPV+F SN PER+P+SF SPPSPTPT+MP IQQQRQ+ Q+QPFRSEHP HQTR
Sbjct: 1021 VEGGNVVKPVTFASNIPERVPISFHSPPSPTPTRMPLIQQQRQQSQIQPFRSEHP-HQTR 1058
Query: 1081 VNISLPPAEKSAPSLGSWRPRQQDIGSHYNSGANQNNDSKFVGGSMAAVRGGPSWGRNEF 1140
VNISLPP+EKSAPSLGSW+PRQQDIGSHYNSG NQ NDSKFVGGSMAA RGGPSWGRNEF
Sbjct: 1081 VNISLPPSEKSAPSLGSWKPRQQDIGSHYNSGTNQRNDSKFVGGSMAA-RGGPSWGRNEF 1058
Query: 1141 ESWSPENSPVRTQEYNRPDKSFTEPRINSGRSYGPADNQQQRQRSPYGYRDQNRHG-NSN 1167
ESWSPENSPVRTQEY+RPDKS +EPR NSGRSYGPAD QQQRQRSPYGY++QNRHG N+N
Sbjct: 1141 ESWSPENSPVRTQEYSRPDKSISEPRTNSGRSYGPAD-QQQRQRSPYGYQEQNRHGTNNN 1058
BLAST of Lsi02G023700 vs. TAIR 10
Match:
AT4G02560.1 (Homeodomain-like superfamily protein )
HSP 1 Score: 460.7 bits (1184), Expect = 3.5e-129
Identity = 391/1086 (36.00%), Postives = 548/1086 (50.46%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
M+ K++ +EIG+SV+S + LDSQK LF SQ+DQLQ +VV QCKLTGVNPL+QEMAA
Sbjct: 1 MDAFKEE---IEIGSSVESLMELLDSQKVLFHSQIDQLQDVVVAQCKLTGVNPLAQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSI IGKRPRDLLNPKAVKY+Q VF+IKDA+SK+ESREISALFG+ V QVR+FF +Q+
Sbjct: 61 GALSIKIGKRPRDLLNPKAVKYLQAVFAIKDAISKRESREISALFGITVAQVREFFVTQK 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
+RVRK VR+SREK + SN+ ++ D VP N++A N V P+PLN
Sbjct: 121 TRVRKQVRLSREKVVMSNT--------------HALQDDGVPENNNAT---NHVEPVPLN 180
Query: 181 SEAP--VPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEE 240
S P +++ + I P ++ S S DK+FV+ IFS+++KEE
Sbjct: 181 SIHPEACSISWGEGETVALIPPEDIPPDISDS------------DKYFVENIFSLLRKEE 240
Query: 241 TFSGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDC 300
TFSGQVKLMEWI+QIQ++SVL W
Sbjct: 241 TFSGQVKLMEWIMQIQDASVLIW------------------------------------- 300
Query: 301 VRFLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYA-- 360
FL+KGG +IL TWLSQAA+EEQTS+L +IL+ LCH+ L A
Sbjct: 301 --FLSKGGVLILTTWLSQAASEEQTSVLLLILK---------------VLCHLPLHKASP 360
Query: 361 ---------LLLLCFWLCIELTFELHITLTFFVICLYTRLFLYI------------FQQY 420
+ L F+ +++ L+ +T+LF I
Sbjct: 361 ENMSAILQSVNGLRFYRISDISNRAKGLLS-----RWTKLFAKIQAMKKQNRNSSQIDSQ 420
Query: 421 FKVLITCDFTEL-------QENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLGF 480
++L+ E+ ++ SN +N+R+ ES Q KLL S+DD +K++LG
Sbjct: 421 SQLLLKQSIAEIMGDSSNPEDILSLSNGKSENVRRIESSQGPKLLLTSADDSTKKHMLGS 480
Query: 481 -----RERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYG 540
+ERRKVQMVEQP QK AG++ Q R + + RPMS DDIQKAKMRA +MQSK
Sbjct: 481 NPSYNKERRKVQMVEQPGQKAAGKSPQTVRIGTSGRSRPMSADDIQKAKMRALYMQSKNS 540
Query: 541 KTG---STNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVE 600
K S G + + + KPL L S +P P+ + +
Sbjct: 541 KKDPLPSAIGDSKIVAPE--KPLALHSAKDSP-----------------PIQNNEAKTED 600
Query: 601 TPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDN 660
TP+ S ++ S + + + L P N D
Sbjct: 601 TPVLSTVQPVNGFSTIQPVNGPSAVQPVNGPLAVQPVNGPSALQPVNGPSAVIVPVQADE 660
Query: 661 LLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGG 720
I P T ++ + + T+ + + G M+L++LWRV
Sbjct: 661 -----IKKPSTPPKSISSKVGVMMKMSSQTILKNCKRKQIDWHVPPG--MELDELWRVAA 720
Query: 721 GENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNEN 780
G NSKEA Q+NRN RE+ET YQ++ IP NPKEPWD EMDYDDSLTPEI ++Q P+
Sbjct: 721 GGNSKEADVQRNRNRRERETTYQSLQTIPLNPKEPWDREMDYDDSLTPEIPSQQPPEESL 780
Query: 781 SE----AEVRNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGN 840
+E + R AA S +SS EPDLELLA LLKNP+LVYALTS + N
Sbjct: 781 TEPQDSLDERRIAAGAATTSSSLSS-------PEPDLELLAALLKNPDLVYALTSGKPSN 840
Query: 841 LPTEETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNP 900
L ++ VKLLD+IK G ++ N ++ E+VEVSLPSPTPS+N G SGW +RNP
Sbjct: 841 LAGQDMVKLLDVIKTGAPNSSSSSN--KQVEERVEVSLPSPTPSTNPGMSGWGQEGIRNP 900
Query: 901 FSQRDSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLP 960
FS+++ + + VA S + ++ + T Q P ++ +++
Sbjct: 901 FSRQNQVG-TAVARSGTQLRVGSMQWHQ------TNEQSIPRHAPSAYSNSITLAHTERE 945
Query: 961 QTMINGRQSHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQP-------VVN 1020
Q + HH +H Q QQ +S+++ V+ P ++ G S + Q N
Sbjct: 961 QQQYMQPKLHHNLHFQQQQQQPISTTSYAVREPVGQMGTGTSSSWRSQQSQNSYYSHQEN 945
Query: 1021 HLTAAASSVRIEGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPF 1036
+ +A+ +G + + S+ P S + PS M + Q+Q+ +
Sbjct: 1021 EIASASQVTSYQGNS-----QYMSSNPGYESWSPDNSPSRNQLNM---RGQQQQASRKHD 945
BLAST of Lsi02G023700 vs. TAIR 10
Match:
AT4G02560.2 (Homeodomain-like superfamily protein )
HSP 1 Score: 460.7 bits (1184), Expect = 3.5e-129
Identity = 391/1086 (36.00%), Postives = 548/1086 (50.46%), Query Frame = 0
Query: 1 MEVLKDDSSNLEIGTSVDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLSQEMAA 60
M+ K++ +EIG+SV+S + LDSQK LF SQ+DQLQ +VV QCKLTGVNPL+QEMAA
Sbjct: 1 MDAFKEE---IEIGSSVESLMELLDSQKVLFHSQIDQLQDVVVAQCKLTGVNPLAQEMAA 60
Query: 61 GALSITIGKRPRDLLNPKAVKYMQTVFSIKDALSKKESREISALFGVKVTQVRDFFNSQR 120
GALSI IGKRPRDLLNPKAVKY+Q VF+IKDA+SK+ESREISALFG+ V QVR+FF +Q+
Sbjct: 61 GALSIKIGKRPRDLLNPKAVKYLQAVFAIKDAISKRESREISALFGITVAQVREFFVTQK 120
Query: 121 SRVRKLVRVSREKSIQSNSCKQLEVGGIATNNDPSMPIDAVPLNSDAVVPLNSVAPIPLN 180
+RVRK VR+SREK + SN+ ++ D VP N++A N V P+PLN
Sbjct: 121 TRVRKQVRLSREKVVMSNT--------------HALQDDGVPENNNAT---NHVEPVPLN 180
Query: 181 SEAP--VPLNFDTPVPLNTIEPSNVDNGPSCSTQDSELSGLDGVDKHFVQTIFSMMQKEE 240
S P +++ + I P ++ S S DK+FV+ IFS+++KEE
Sbjct: 181 SIHPEACSISWGEGETVALIPPEDIPPDISDS------------DKYFVENIFSLLRKEE 240
Query: 241 TFSGQVKLMEWILQIQNSSVLCWYYSNYSFDWASVFCLSVLFFSSCFDIQFPHPALCLDC 300
TFSGQVKLMEWI+QIQ++SVL W
Sbjct: 241 TFSGQVKLMEWIMQIQDASVLIW------------------------------------- 300
Query: 301 VRFLTKGGAIILATWLSQAAAEEQTSLLHVILESFLAIRCTNESFWLTCLCHIHLAYA-- 360
FL+KGG +IL TWLSQAA+EEQTS+L +IL+ LCH+ L A
Sbjct: 301 --FLSKGGVLILTTWLSQAASEEQTSVLLLILK---------------VLCHLPLHKASP 360
Query: 361 ---------LLLLCFWLCIELTFELHITLTFFVICLYTRLFLYI------------FQQY 420
+ L F+ +++ L+ +T+LF I
Sbjct: 361 ENMSAILQSVNGLRFYRISDISNRAKGLLS-----RWTKLFAKIQAMKKQNRNSSQIDSQ 420
Query: 421 FKVLITCDFTEL-------QENFVTSNVNVDNMRKPESHQALKLLPASSDDLNRKNVLGF 480
++L+ E+ ++ SN +N+R+ ES Q KLL S+DD +K++LG
Sbjct: 421 SQLLLKQSIAEIMGDSSNPEDILSLSNGKSENVRRIESSQGPKLLLTSADDSTKKHMLGS 480
Query: 481 -----RERRKVQMVEQPDQKIAGRNSQAPRTSPASQGRPMSTDDIQKAKMRAQFMQSKYG 540
+ERRKVQMVEQP QK AG++ Q R + + RPMS DDIQKAKMRA +MQSK
Sbjct: 481 NPSYNKERRKVQMVEQPGQKAAGKSPQTVRIGTSGRSRPMSADDIQKAKMRALYMQSKNS 540
Query: 541 KTG---STNGRTNVKSENVYKPLHLVSGASTPASKVSLLPKFEDQKKAVPLFPKCSNKVE 600
K S G + + + KPL L S +P P+ + +
Sbjct: 541 KKDPLPSAIGDSKIVAPE--KPLALHSAKDSP-----------------PIQNNEAKTED 600
Query: 601 TPLHSKIEMDFKDSVGEKCKRVQIQWRMPPAFETMSKLFHNNLMPQNTTPDSNGKHHKDN 660
TP+ S ++ S + + + L P N D
Sbjct: 601 TPVLSTVQPVNGFSTIQPVNGPSAVQPVNGPLAVQPVNGPSALQPVNGPSAVIVPVQADE 660
Query: 661 LLSIYISNPVTSLSTVEKYELLQLAPIGFTVGHRGRDFVKGEEIGQGHEMKLNDLWRVGG 720
I P T ++ + + T+ + + G M+L++LWRV
Sbjct: 661 -----IKKPSTPPKSISSKVGVMMKMSSQTILKNCKRKQIDWHVPPG--MELDELWRVAA 720
Query: 721 GENSKEAGFQKNRNSREKETFYQTILDIPSNPKEPWDLEMDYDDSLTPEILTEQLPDNEN 780
G NSKEA Q+NRN RE+ET YQ++ IP NPKEPWD EMDYDDSLTPEI ++Q P+
Sbjct: 721 GGNSKEADVQRNRNRRERETTYQSLQTIPLNPKEPWDREMDYDDSLTPEIPSQQPPEESL 780
Query: 781 SE----AEVRNHVVDAAVPSEVISSQDLKPNAAEPDLELLAVLLKNPELVYALTSSQAGN 840
+E + R AA S +SS EPDLELLA LLKNP+LVYALTS + N
Sbjct: 781 TEPQDSLDERRIAAGAATTSSSLSS-------PEPDLELLAALLKNPDLVYALTSGKPSN 840
Query: 841 LPTEETVKLLDMIKAGGASNLGGVNTMEKTVEQVEVSLPSPTPSSNAGTSGWKPAVLRNP 900
L ++ VKLLD+IK G ++ N ++ E+VEVSLPSPTPS+N G SGW +RNP
Sbjct: 841 LAGQDMVKLLDVIKTGAPNSSSSSN--KQVEERVEVSLPSPTPSTNPGMSGWGQEGIRNP 900
Query: 901 FSQRDSIAESRVAHSSPPVDTSTIAVSRIPANIVTPNQQHAAMPPVSHQLPASVSQFSLP 960
FS+++ + + VA S + ++ + T Q P ++ +++
Sbjct: 901 FSRQNQVG-TAVARSGTQLRVGSMQWHQ------TNEQSIPRHAPSAYSNSITLAHTERE 945
Query: 961 QTMINGRQSHHVVHSHQHQQGVVSSSTPNVQLPNSEIALGLRSFPITNQP-------VVN 1020
Q + HH +H Q QQ +S+++ V+ P ++ G S + Q N
Sbjct: 961 QQQYMQPKLHHNLHFQQQQQQPISTTSYAVREPVGQMGTGTSSSWRSQQSQNSYYSHQEN 945
Query: 1021 HLTAAASSVRIEGRNIVKPVSFTSNTPERIPMSFQSPPSPTPTQMPPIQQQRQEPQLQPF 1036
+ +A+ +G + + S+ P S + PS M + Q+Q+ +
Sbjct: 1021 EIASASQVTSYQGNS-----QYMSSNPGYESWSPDNSPSRNQLNM---RGQQQQASRKHD 945
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q38796 | 5.0e-128 | 36.00 | Homeobox protein LUMINIDEPENDENS OS=Arabidopsis thaliana OX=3702 GN=LD PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0K948 | 0.0e+00 | 74.42 | Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G394710 PE... | [more] |
A0A1S3BRZ1 | 0.0e+00 | 74.38 | homeobox protein LUMINIDEPENDENS OS=Cucumis melo OX=3656 GN=LOC103492850 PE=4 SV... | [more] |
A0A6J1GNX5 | 0.0e+00 | 71.50 | homeobox protein LUMINIDEPENDENS-like OS=Cucurbita moschata OX=3662 GN=LOC111456... | [more] |
A0A6J1JT12 | 0.0e+00 | 71.33 | homeobox protein LUMINIDEPENDENS-like OS=Cucurbita maxima OX=3661 GN=LOC11148807... | [more] |
A0A6J1H884 | 0.0e+00 | 68.26 | homeobox protein LUMINIDEPENDENS-like isoform X1 OS=Cucurbita moschata OX=3662 G... | [more] |
Match Name | E-value | Identity | Description | |
XP_038876754.1 | 0.0e+00 | 76.29 | homeobox protein LUMINIDEPENDENS [Benincasa hispida] | [more] |
XP_011659347.1 | 0.0e+00 | 74.42 | homeobox protein LUMINIDEPENDENS isoform X1 [Cucumis sativus] >KGN44902.1 hypoth... | [more] |
XP_008451616.1 | 0.0e+00 | 74.38 | PREDICTED: homeobox protein LUMINIDEPENDENS [Cucumis melo] | [more] |
KAG7014383.1 | 0.0e+00 | 73.85 | Homeobox protein LUMINIDEPENDENS [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_023548067.1 | 0.0e+00 | 71.77 | homeobox protein LUMINIDEPENDENS-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT4G02560.1 | 3.5e-129 | 36.00 | Homeodomain-like superfamily protein | [more] |
AT4G02560.2 | 3.5e-129 | 36.00 | Homeodomain-like superfamily protein | [more] |