Lsi02G023420 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G023420
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Mitochondrial substrate carrier family protein
Location	chr02: 30073188 .. 30074861 (-)
RNA-Seq Expression	Lsi02G023420
Synteny	Lsi02G023420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAGAACTTGACTCGCAATGGAAGAGGAAAGGCAAAGAAATGAAGGAGGGTTCAATGAGAAAAATTAGCGGGTGCAAATAGCAGTAACCTGTCCACTATATAAATAGAATGTCGGGGAAACTGGGGAAAGCAGAAAGGGAAATGGTTAACGAATCTTCTTCCCAAGAATCCTCCATTTCAGGTTCTCTTTCTTTCTTCATTTTTTATTATTACGCTTCCAATTCGATCAATTTTGGGGGTTCACCTTCTGTTTGGTTGAATTCCGATCAATTTCCGACTGATTTTTCTTTCTCCAATTGTATTCAGGAGTTTTGGCGCGCAATGAGAGGCGGAATTGGGCGGCTTCTCCGTCTGATGTTCTTTATCATTTTGGAACCAGCGGGCTCTCCGTCGCGGTCGCCACTGCCGTTACTCACCCTTTAGGTTTTCTCTCTTTTTTTCTTTTAACTTTTGAATTATGCCTTTTCGGTTCTTATTTTTGTGGTTTCGAAATCTATATGCCACATGTCAGTGATGGGTATTTTGTGGTTCGTTGGGCTATTAAATGCATGTCATTCTTGTAAGATGCTAGGTTTTGGTGGACCTCGAATTGAATCTGATGCAACCGTTTTGGTTCCTCATTGTTACGCTCGTGGTGAATACGACTGTGGAACTATATAACGAACTTTTTTTTTGGTAACTGTTTTACTCATAGCAATCATTTCTTGATGTGTGGCATTTCATTTGCATTATCTCGTGTTGTCACTGTTTTAGTTTTCTCCACGTATTATTTCATATAATAATGCTTAGTACATGCTACAATCGATATATGTATGATGAATGGAGAACTTGGAAGGAATGAATAAGAGAATTCCTGAACTAGAACGAATTGGTTGTTTTTTGGCAGATTTTGCTGGCTTAACCCCGTCGTACTCCGAACCACGTAGAAATAACATGAATGATTCTTAATTTTCAGAAGAGAGAGAGAGAGAGAGAGAAGAAATTGATCCTATAGCCAACAAACAGTGATCTTAATTTGTGTCCAGCTTGAATGCAGATGTACTTAAAGTTAGGTTGCAAATGCAACTTGTGGGGCAAAGGGGGCCTCTGATTGGAATGGTATTCACGTTTTTCCTATAAGGATTTCATTTTTTTTTCTTGAACTTTCTTGTTGTATAATATATTAATTGAGGACATGCATAGGGACAACTATTTGTGCAACTGTTGAATAATGAAGGGCCAAGGTCTTTGTATTTGGGGTTATCACCAGCTCTGACAAGATCAGTTCTCTATGGAGGTCTCCGTTTAGGTTTATATGAACCGTCAAAGCATGCTTCTGATTTGCTTTTCGGGTCTACTAATATCTTTGTTAAGATTGGAGCTGGAGCAATTTCTGGTGCAGTTGCAACCGCTCTGACCAATCCAGTTGAAGTTCTCAAGGTGATAATTAGGTTGCCTCTCATTACTTAACTTTTGAATTATAGTTTGATCTTAAAGTTATTTATTATTGCCAGGTGCGATTACAAATGAATCCAAACTCAACCAAAGGACCAATAAAAGAAATGTCCAGAATTGTTTCTGAGGAGGGACTAAAAGCTCTTTGGAAGGGCGTTGGCCCTGCTATGGCCAGAGCAGGTGCTTTGACAGCATCTCAGCTGGCAACATATGATGAATCTAAGCGGGTCTATTTCTAA

mRNA sequence

TTGAGAACTTGACTCGCAATGGAAGAGGAAAGGCAAAGAAATGAAGGAGGGTTCAATGAGAAAAATTAGCGGGTGCAAATAGCAGTAACCTGTCCACTATATAAATAGAATGTCGGGGAAACTGGGGAAAGCAGAAAGGGAAATGGTTAACGAATCTTCTTCCCAAGAATCCTCCATTTCAGGAGTTTTGGCGCGCAATGAGAGGCGGAATTGGGCGGCTTCTCCGTCTGATGTTCTTTATCATTTTGGAACCAGCGGGCTCTCCGTCGCGGTCGCCACTGCCGTTACTCACCCTTTAGGTTTTGGTGGACCTCGAATTGAATCTGATGCAACCGTTTTGGTTCCTCATTGTTACGCTCGTGGGCCAAGGTCTTTGTATTTGGGGTTATCACCAGCTCTGACAAGATCAGTTCTCTATGGAGGTCTCCGTTTAGGTTTATATGAACCGTCAAAGCATGCTTCTGATTTGCTTTTCGGGTCTACTAATATCTTTGTTAAGATTGGAGCTGGAGCAATTTCTGGTGCAGTTGCAACCGCTCTGACCAATCCAGTTGAAGTTCTCAAGGTGCGATTACAAATGAATCCAAACTCAACCAAAGGACCAATAAAAGAAATGTCCAGAATTGTTTCTGAGGAGGGACTAAAAGCTCTTTGGAAGGGCGTTGGCCCTGCTATGGCCAGAGCAGGTGCTTTGACAGCATCTCAGCTGGCAACATATGATGAATCTAAGCGGGTCTATTTCTAA

Coding sequence (CDS)

ATGTCGGGGAAACTGGGGAAAGCAGAAAGGGAAATGGTTAACGAATCTTCTTCCCAAGAATCCTCCATTTCAGGAGTTTTGGCGCGCAATGAGAGGCGGAATTGGGCGGCTTCTCCGTCTGATGTTCTTTATCATTTTGGAACCAGCGGGCTCTCCGTCGCGGTCGCCACTGCCGTTACTCACCCTTTAGGTTTTGGTGGACCTCGAATTGAATCTGATGCAACCGTTTTGGTTCCTCATTGTTACGCTCGTGGGCCAAGGTCTTTGTATTTGGGGTTATCACCAGCTCTGACAAGATCAGTTCTCTATGGAGGTCTCCGTTTAGGTTTATATGAACCGTCAAAGCATGCTTCTGATTTGCTTTTCGGGTCTACTAATATCTTTGTTAAGATTGGAGCTGGAGCAATTTCTGGTGCAGTTGCAACCGCTCTGACCAATCCAGTTGAAGTTCTCAAGGTGCGATTACAAATGAATCCAAACTCAACCAAAGGACCAATAAAAGAAATGTCCAGAATTGTTTCTGAGGAGGGACTAAAAGCTCTTTGGAAGGGCGTTGGCCCTGCTATGGCCAGAGCAGGTGCTTTGACAGCATCTCAGCTGGCAACATATGATGAATCTAAGCGGGTCTATTTCTAA

Protein sequence

MSGKLGKAEREMVNESSSQESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPLGFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHASDLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGLKALWKGVGPAMARAGALTASQLATYDESKRVYF

Homology

[Close]

BLAST of Lsi02G023420 vs. ExPASy Swiss-Prot
Match: B0G143 (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum OX=44689 GN=ucpB PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.4e-19
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 0


Query: 50  GLSVAVATAVTHPLG-------FGGPRIESDATVLVPHCYA----RGPRSLYLGLSPALT 109
           GLS   A  V++P+          G  I+S +  LV          G  ++Y GL+P+L 
Sbjct: 15  GLSCMGAAVVSNPVDVLKTRFQIHGEGIDSKSLGLVNGTIKIIKNEGISAMYKGLTPSLL 74

Query: 110 RSVLYGGLRLGLYEPSKHASDLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMN 169
           R   Y  LR+G Y+  K+      G TN+  K+ +GA+SGA+   +T+P +++KVR+Q +
Sbjct: 75  REATYSTLRMGGYDVIKNYFIDSNGKTNLLSKVTSGALSGALGACITSPTDLIKVRMQAS 134

Query: 170 PNSTK--GPIKEMSRIVSEEGLKALWKGVGPAMARAGALTASQLATYDESKRV 210
               K          I+++EG+K LWKGVGP   RA  LTASQ+ +YD  K +
Sbjct: 135 SKGVKYDSISSAFKEIIAKEGIKGLWKGVGPTTQRAALLTASQIPSYDHIKHM 187

[Close]

BLAST of Lsi02G023420 vs. ExPASy Swiss-Prot
Match: O81845 (Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana OX=3702 GN=PUMP1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-18
Identity = 53/132 (40.15%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 85  GPRSLYLGLSPALTRSVLYGGLRLGLYEPSK--HASDLLFGSTNIFVKIGAGAISGAVAT 144
           G RSL+ G+ P L R  L+GGLR+G+YEP K  +      G   +  KI AG  +GA+  
Sbjct: 70  GLRSLWKGVVPGLHRQCLFGGLRIGMYEPVKNLYVGKDFVGDVPLSKKILAGLTTGALGI 129

Query: 145 ALTNPVEVLKVRLQMN-------PNSTKGPIKEMSRIVSEEGLKALWKGVGPAMARAGAL 204
            + NP +++KVRLQ         P    G +   S IV +EG++ALW G+GP +AR   +
Sbjct: 130 MVANPTDLVKVRLQAEGKLAAGAPRRYSGALNAYSTIVRQEGVRALWTGLGPNVARNAII 189

Query: 205 TASQLATYDESK 208
            A++LA+YD+ K
Sbjct: 190 NAAELASYDQVK 201

[Close]

BLAST of Lsi02G023420 vs. ExPASy Swiss-Prot
Match: Q9ZWG1 (Mitochondrial uncoupling protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUMP2 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.3e-17
Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 68  PRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKH---ASDLLFGS 127
           P+       L       G   L+ G+   L R  +YGGLR+GLYEP K     SD + G 
Sbjct: 55  PKYRGSIGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFI-GD 114

Query: 128 TNIFVKIGAGAISGAVATALTNPVEVLKVRLQMN-------PNSTKGPIKEMSRIVSEEG 187
             ++ KI A  ++GA+A  + NP +++KVRLQ         P    G +     IV  EG
Sbjct: 115 IPLYQKILAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEG 174

Query: 188 LKALWKGVGPAMARAGALTASQLATYDESK 208
           + ALW G+GP +AR   + A++LA+YD+ K
Sbjct: 175 VSALWTGLGPNIARNAIVNAAELASYDQIK 203

[Close]

BLAST of Lsi02G023420 vs. ExPASy Swiss-Prot
Match: Q9FY68 (Mitochondrial uncoupling protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUMP6 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 85  GPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHA-SDLLFGSTNIFVKIGAGAISGAVATA 144
           GP +L+ G+S  + R +LY   R+G+Y+  K   +D L G+  +  KI AG I+GAV + 
Sbjct: 104 GPAALFSGVSATILRQMLYSATRMGIYDFLKRRWTDQLTGNFPLVTKITAGLIAGAVGSV 163

Query: 145 LTNPVEVLKVRLQMNPN-------STKGPIKEMSRIVSEEGLKALWKGVGPAMARAGALT 204
           + NP +V  VR+Q + +       + K  +  + RI  +EG+ +LW+G    + RA  +T
Sbjct: 164 VGNPADVAMVRMQADGSLPLNRRRNYKSVVDAIDRIARQEGVSSLWRGSWLTVNRAMIVT 223

Query: 205 ASQLATYDESKRV 210
           ASQLATYD  K +
Sbjct: 224 ASQLATYDHVKEI 236

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BLAST of Lsi02G023420 vs. ExPASy Swiss-Prot
Match: O97562 (Mitochondrial uncoupling protein 2 OS=Sus scrofa OX=9823 GN=UCP2 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-14
Identity = 46/125 (36.80%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 85  GPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHASDLLFGSTNIFVKIGAGAISGAVATAL 144
           GPRSLY GL   L R + +  +R+GLY+  KH          I  ++ AG+ +GA+A A+
Sbjct: 74  GPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTKGSEHAGIGSRLLAGSTTGALAVAV 133

Query: 145 TNPVEVLKVRLQMNPNSTKG-----PIKEMSRIVSEEGLKALWKGVGPAMARAGALTASQ 204
             P +V+KVR Q    +  G      +     I  EEGL+ LWKG  P +AR   +  ++
Sbjct: 134 AQPTDVVKVRFQAQARAGGGRRYRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVNCAE 193

[Close]

BLAST of Lsi02G023420 vs. ExPASy TrEMBL
Match: A0A5A7UNT4 (Mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00140 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.5e-83
Identity = 177/213 (83.10%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 12  MVNESSS-QESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL------- 71
           MVN+SSS QESSISGVL RNERRNWAASPSDVL+HFGTSGLSVA+ATAVTHPL       
Sbjct: 3   MVNKSSSPQESSISGVLPRNERRNWAASPSDVLHHFGTSGLSVAIATAVTHPLDVLKVRL 62

Query: 72  -----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 131
                G  GP I     V V      GPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS
Sbjct: 63  QMQLVGQRGPLI-GMGQVFVQLLNNEGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 122

Query: 132 DLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGL 191
           DLLFGSTNIFVKIGAGAI+GAVATALTNPVEVLKVRLQMNPNST G +KEMSRIVSEEGL
Sbjct: 123 DLLFGSTNIFVKIGAGAIAGAVATALTNPVEVLKVRLQMNPNSTNGSMKEMSRIVSEEGL 182

Query: 192 KALWKGVGPAMARAGALTASQLATYDESKRVYF 212
           KALWKGVGPAMARAGALTASQLATYDESKRVYF
Sbjct: 183 KALWKGVGPAMARAGALTASQLATYDESKRVYF 214

[Close]

BLAST of Lsi02G023420 vs. ExPASy TrEMBL
Match: A0A1S3BSK0 (mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492725 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.5e-81
Identity = 175/211 (82.94%), Postives = 180/211 (85.31%), Query Frame = 0


Query: 12  MVNESSS-QESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL------- 71
           MVN+SSS QESSISGVL RNERRNWAASPSDVL+HFGTSGLSVA+ATAVTHPL       
Sbjct: 1   MVNKSSSPQESSISGVLPRNERRNWAASPSDVLHHFGTSGLSVAIATAVTHPLDVLKVRL 60

Query: 72  -----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 131
                G  GP I     V V      GPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS
Sbjct: 61  QMQLVGQRGPLI-GMGQVFVQLLNNEGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 120

Query: 132 DLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGL 191
           DLLFGSTNIFVKIGAGAI+GAVATALTNPVEVLKVRLQMNPNST G +KEMSRIVSEEGL
Sbjct: 121 DLLFGSTNIFVKIGAGAIAGAVATALTNPVEVLKVRLQMNPNSTNGSMKEMSRIVSEEGL 180

Query: 192 KALWKGVGPAMARAGALTASQLATYDESKRV 210
           KALWKGVGPAMARAGALTASQLATYDESKRV
Sbjct: 181 KALWKGVGPAMARAGALTASQLATYDESKRV 210

[Close]

BLAST of Lsi02G023420 vs. ExPASy TrEMBL
Match: A0A6J1KWR8 (mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497854 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.6e-80
Identity = 169/210 (80.48%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 12  MVNESSSQESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL-------- 71
           MV+ESSSQES+ISGVLARNE+RNWA SPSDV YHFGTSG SVAVATAVTHPL        
Sbjct: 1   MVDESSSQESAISGVLARNEKRNWAVSPSDVGYHFGTSGFSVAVATAVTHPLDVLKVRLQ 60

Query: 72  ----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHASD 131
               G  GP I     + V      GPRSLYLGLSPALTRSVLYGGLRLGLYEPSK+ASD
Sbjct: 61  MQLVGQRGPLI-GMGQLFVQLLNNEGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKYASD 120

Query: 132 LLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGLK 191
           L+FGSTNIFVKIG+GAISGAVATALTNPVEVLKVRLQMNPNST+GPIKEMS+IVSEEGLK
Sbjct: 121 LVFGSTNIFVKIGSGAISGAVATALTNPVEVLKVRLQMNPNSTRGPIKEMSKIVSEEGLK 180

Query: 192 ALWKGVGPAMARAGALTASQLATYDESKRV 210
           ALWKGVGPAMARAGALTASQLATYDE+K+V
Sbjct: 181 ALWKGVGPAMARAGALTASQLATYDEAKQV 209

[Close]

BLAST of Lsi02G023420 vs. ExPASy TrEMBL
Match: A0A6J1H690 (mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460838 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.8e-80
Identity = 167/210 (79.52%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 12  MVNESSSQESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL-------- 71
           MV+ESSSQES+ISGVLARNE+RNWA SPSDV YHFGTSG SVA+ATAVTHPL        
Sbjct: 1   MVDESSSQESAISGVLARNEKRNWAVSPSDVGYHFGTSGFSVAIATAVTHPLDVLKVRLQ 60

Query: 72  ----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHASD 131
               G  GP I     + V      GPRSLYLGLSPALTRSVLYGGLRLGLYEPSK+ASD
Sbjct: 61  MQLVGQRGPLI-GMGQLFVQLLNNEGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKYASD 120

Query: 132 LLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGLK 191
           L+FGSTNIFVKIG+GAISGAVATALTNPVEVLKVRLQMNPNST+GPIKEMS+I+SEEGLK
Sbjct: 121 LVFGSTNIFVKIGSGAISGAVATALTNPVEVLKVRLQMNPNSTRGPIKEMSKIISEEGLK 180

Query: 192 ALWKGVGPAMARAGALTASQLATYDESKRV 210
           ALWKGVGPAMARAGALTASQLATYDE+K+V
Sbjct: 181 ALWKGVGPAMARAGALTASQLATYDEAKQV 209

[Close]

BLAST of Lsi02G023420 vs. ExPASy TrEMBL
Match: A0A5D3D3Z5 (Mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002070 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.4e-79
Identity = 177/244 (72.54%), Postives = 182/244 (74.59%), Query Frame = 0


Query: 12  MVNESSS-QESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPLGF----- 71
           MVN+SSS QESSISGVL RNERRNWAASPSDVL+HFGTSGLSVA+ATAVTHPLG      
Sbjct: 3   MVNKSSSPQESSISGVLPRNERRNWAASPSDVLHHFGTSGLSVAIATAVTHPLGSLSLSL 62

Query: 72  --------------------------------------GGPRIESDATVLVPHCYARGPR 131
                                                  GP I     V V      GPR
Sbjct: 63  YIYIFIFSFKILKNAFPVLVFLNADVLKVRLQMQLVGQRGPLI-GMGQVFVQLLNNEGPR 122

Query: 132 SLYLGLSPALTRSVLYGGLRLGLYEPSKHASDLLFGSTNIFVKIGAGAISGAVATALTNP 191
           SLYLGLSPALTRSVLYGGLRLGLYEPSKHASDLLFGSTNIFVKIGAGAI+GAVATALTNP
Sbjct: 123 SLYLGLSPALTRSVLYGGLRLGLYEPSKHASDLLFGSTNIFVKIGAGAIAGAVATALTNP 182

Query: 192 VEVLKVRLQMNPNSTKGPIKEMSRIVSEEGLKALWKGVGPAMARAGALTASQLATYDESK 212
           VEVLKVRLQMNPNST G +KEMSRIVSEEGLKALWKGVGPAMARAGALTASQLATYDESK
Sbjct: 183 VEVLKVRLQMNPNSTNGSMKEMSRIVSEEGLKALWKGVGPAMARAGALTASQLATYDESK 242

[Close]

BLAST of Lsi02G023420 vs. NCBI nr
Match: XP_038896316.1 (mitochondrial substrate carrier family protein ucpB isoform X1 [Benincasa hispida] >XP_038896317.1 mitochondrial substrate carrier family protein ucpB isoform X1 [Benincasa hispida] >XP_038896318.1 mitochondrial substrate carrier family protein ucpB isoform X1 [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 179/210 (85.24%), Postives = 181/210 (86.19%), Query Frame = 0


Query: 12  MVNESSSQESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL-------- 71
           MVN SSSQESSISGVLARNERR WAASPSDVLYHFGTSGLSVAVATAVTHPL        
Sbjct: 1   MVNGSSSQESSISGVLARNERRIWAASPSDVLYHFGTSGLSVAVATAVTHPLDVLKVRLQ 60

Query: 72  ----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHASD 131
               G  GP I     V +      GPRSLYLGLSPALTRSVLYGGLRLGLYEPSK+ASD
Sbjct: 61  MQLVGRRGPLI-GMGQVFLQLLNNEGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKYASD 120

Query: 132 LLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGLK 191
           LLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGLK
Sbjct: 121 LLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGLK 180

Query: 192 ALWKGVGPAMARAGALTASQLATYDESKRV 210
           ALWKGVGPAMARAGALTASQLATYDESKRV
Sbjct: 181 ALWKGVGPAMARAGALTASQLATYDESKRV 209

[Close]

BLAST of Lsi02G023420 vs. NCBI nr
Match: KAA0057543.1 (mitochondrial substrate carrier family protein ucpB isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 317.4 bits (812), Expect = 9.4e-83
Identity = 177/213 (83.10%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 12  MVNESSS-QESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL------- 71
           MVN+SSS QESSISGVL RNERRNWAASPSDVL+HFGTSGLSVA+ATAVTHPL       
Sbjct: 3   MVNKSSSPQESSISGVLPRNERRNWAASPSDVLHHFGTSGLSVAIATAVTHPLDVLKVRL 62

Query: 72  -----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 131
                G  GP I     V V      GPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS
Sbjct: 63  QMQLVGQRGPLI-GMGQVFVQLLNNEGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 122

Query: 132 DLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGL 191
           DLLFGSTNIFVKIGAGAI+GAVATALTNPVEVLKVRLQMNPNST G +KEMSRIVSEEGL
Sbjct: 123 DLLFGSTNIFVKIGAGAIAGAVATALTNPVEVLKVRLQMNPNSTNGSMKEMSRIVSEEGL 182

Query: 192 KALWKGVGPAMARAGALTASQLATYDESKRVYF 212
           KALWKGVGPAMARAGALTASQLATYDESKRVYF
Sbjct: 183 KALWKGVGPAMARAGALTASQLATYDESKRVYF 214

[Close]

BLAST of Lsi02G023420 vs. NCBI nr
Match: XP_008451426.1 (PREDICTED: mitochondrial substrate carrier family protein ucpB isoform X1 [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 3.0e-81
Identity = 175/211 (82.94%), Postives = 180/211 (85.31%), Query Frame = 0


Query: 12  MVNESSS-QESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL------- 71
           MVN+SSS QESSISGVL RNERRNWAASPSDVL+HFGTSGLSVA+ATAVTHPL       
Sbjct: 1   MVNKSSSPQESSISGVLPRNERRNWAASPSDVLHHFGTSGLSVAIATAVTHPLDVLKVRL 60

Query: 72  -----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 131
                G  GP I     V V      GPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS
Sbjct: 61  QMQLVGQRGPLI-GMGQVFVQLLNNEGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 120

Query: 132 DLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGL 191
           DLLFGSTNIFVKIGAGAI+GAVATALTNPVEVLKVRLQMNPNST G +KEMSRIVSEEGL
Sbjct: 121 DLLFGSTNIFVKIGAGAIAGAVATALTNPVEVLKVRLQMNPNSTNGSMKEMSRIVSEEGL 180

Query: 192 KALWKGVGPAMARAGALTASQLATYDESKRV 210
           KALWKGVGPAMARAGALTASQLATYDESKRV
Sbjct: 181 KALWKGVGPAMARAGALTASQLATYDESKRV 210

[Close]

BLAST of Lsi02G023420 vs. NCBI nr
Match: XP_004148885.2 (mitochondrial substrate carrier family protein ucpB isoform X1 [Cucumis sativus] >KAE8646319.1 hypothetical protein Csa_015750 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 3.9e-81
Identity = 174/211 (82.46%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 12  MVNESSS-QESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL------- 71
           MVN+SSS QESSISGVL RNERRNWAASPSDVL HFGTSGLSVA+ATAVTHPL       
Sbjct: 1   MVNKSSSPQESSISGVLPRNERRNWAASPSDVLNHFGTSGLSVAIATAVTHPLDVLKVRL 60

Query: 72  -----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 131
                G  GP I     V V      GP+SLYLGLSPALTRSVLYGGLRLGLYEPSKHAS
Sbjct: 61  QMQLVGQRGPLI-GMGQVFVQLLNNEGPKSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 120

Query: 132 DLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGL 191
           DLLFGSTNIFVKIGAGAI+GAVATALTNPVEVLKVRLQMNPNSTKGP+KEMSRIVSEEGL
Sbjct: 121 DLLFGSTNIFVKIGAGAIAGAVATALTNPVEVLKVRLQMNPNSTKGPMKEMSRIVSEEGL 180

Query: 192 KALWKGVGPAMARAGALTASQLATYDESKRV 210
           KALWKGVGPAMARAGALTASQLATYDESK++
Sbjct: 181 KALWKGVGPAMARAGALTASQLATYDESKQL 210

[Close]

BLAST of Lsi02G023420 vs. NCBI nr
Match: XP_031744485.1 (mitochondrial substrate carrier family protein ucpB isoform X5 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 3.9e-81
Identity = 174/211 (82.46%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 12  MVNESSS-QESSISGVLARNERRNWAASPSDVLYHFGTSGLSVAVATAVTHPL------- 71
           MVN+SSS QESSISGVL RNERRNWAASPSDVL HFGTSGLSVA+ATAVTHPL       
Sbjct: 1   MVNKSSSPQESSISGVLPRNERRNWAASPSDVLNHFGTSGLSVAIATAVTHPLDVLKVRL 60

Query: 72  -----GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 131
                G  GP I     V V      GP+SLYLGLSPALTRSVLYGGLRLGLYEPSKHAS
Sbjct: 61  QMQLVGQRGPLI-GMGQVFVQLLNNEGPKSLYLGLSPALTRSVLYGGLRLGLYEPSKHAS 120

Query: 132 DLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEEGL 191
           DLLFGSTNIFVKIGAGAI+GAVATALTNPVEVLKVRLQMNPNSTKGP+KEMSRIVSEEGL
Sbjct: 121 DLLFGSTNIFVKIGAGAIAGAVATALTNPVEVLKVRLQMNPNSTKGPMKEMSRIVSEEGL 180

Query: 192 KALWKGVGPAMARAGALTASQLATYDESKRV 210
           KALWKGVGPAMARAGALTASQLATYDESK++
Sbjct: 181 KALWKGVGPAMARAGALTASQLATYDESKQL 210

[Close]

BLAST of Lsi02G023420 vs. TAIR 10
Match: AT4G03115.1 (Mitochondrial substrate carrier family protein )

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-52
Identity = 122/213 (57.28%), Postives = 144/213 (67.61%), Query Frame = 0


Query: 12  MVNESSSQESSISGVLARNERR---NWAASPSDVLYHFGTSGLSVAVATAVTHPL----- 71
           M+ + S   +SI  V    E R   N     S V+ HFG SG+SVA+AT VTHPL     
Sbjct: 1   MIGDISPPVTSIPVVEGNEELRKPQNLIPPFSKVVSHFGISGISVALATGVTHPLDVVKV 60

Query: 72  -------GFGGPRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKH 131
                  G  GP I     + +      G RSLYLGL+PALTRSVLYGGLRLGLYEP+K 
Sbjct: 61  RLQMQHVGQRGPLIGMTG-IFLQLMKNEGRRSLYLGLTPALTRSVLYGGLRLGLYEPTKV 120

Query: 132 ASDLLFGSTNIFVKIGAGAISGAVATALTNPVEVLKVRLQMNPNSTKGPIKEMSRIVSEE 191
           + D  FGSTN+ VKI +GA +GA +TALTNPVEV+KVRLQMNPN+   PI E+  IVS+E
Sbjct: 121 SFDWAFGSTNVLVKIASGAFAGAFSTALTNPVEVVKVRLQMNPNAV--PIAEVREIVSKE 180

Query: 192 GLKALWKGVGPAMARAGALTASQLATYDESKRV 210
           G+ ALWKGVGPAM RA ALTASQLATYDE+KR+
Sbjct: 181 GIGALWKGVGPAMVRAAALTASQLATYDEAKRI 210

[Close]

BLAST of Lsi02G023420 vs. TAIR 10
Match: AT3G54110.1 (plant uncoupling mitochondrial protein 1 )

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 53/132 (40.15%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 85  GPRSLYLGLSPALTRSVLYGGLRLGLYEPSK--HASDLLFGSTNIFVKIGAGAISGAVAT 144
           G RSL+ G+ P L R  L+GGLR+G+YEP K  +      G   +  KI AG  +GA+  
Sbjct: 70  GLRSLWKGVVPGLHRQCLFGGLRIGMYEPVKNLYVGKDFVGDVPLSKKILAGLTTGALGI 129

Query: 145 ALTNPVEVLKVRLQMN-------PNSTKGPIKEMSRIVSEEGLKALWKGVGPAMARAGAL 204
            + NP +++KVRLQ         P    G +   S IV +EG++ALW G+GP +AR   +
Sbjct: 130 MVANPTDLVKVRLQAEGKLAAGAPRRYSGALNAYSTIVRQEGVRALWTGLGPNVARNAII 189

Query: 205 TASQLATYDESK 208
            A++LA+YD+ K
Sbjct: 190 NAAELASYDQVK 201

[Close]

BLAST of Lsi02G023420 vs. TAIR 10
Match: AT5G58970.1 (uncoupling protein 2 )

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-18
Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 68  PRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKH---ASDLLFGS 127
           P+       L       G   L+ G+   L R  +YGGLR+GLYEP K     SD + G 
Sbjct: 55  PKYRGSIGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFI-GD 114

Query: 128 TNIFVKIGAGAISGAVATALTNPVEVLKVRLQMN-------PNSTKGPIKEMSRIVSEEG 187
             ++ KI A  ++GA+A  + NP +++KVRLQ         P    G +     IV  EG
Sbjct: 115 IPLYQKILAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEG 174

Query: 188 LKALWKGVGPAMARAGALTASQLATYDESK 208
           + ALW G+GP +AR   + A++LA+YD+ K
Sbjct: 175 VSALWTGLGPNIARNAIVNAAELASYDQIK 203

[Close]

BLAST of Lsi02G023420 vs. TAIR 10
Match: AT5G58970.2 (uncoupling protein 2 )

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-18
Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 68  PRIESDATVLVPHCYARGPRSLYLGLSPALTRSVLYGGLRLGLYEPSKH---ASDLLFGS 127
           P+       L       G   L+ G+   L R  +YGGLR+GLYEP K     SD + G 
Sbjct: 55  PKYRGSIGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFI-GD 114

Query: 128 TNIFVKIGAGAISGAVATALTNPVEVLKVRLQMN-------PNSTKGPIKEMSRIVSEEG 187
             ++ KI A  ++GA+A  + NP +++KVRLQ         P    G +     IV  EG
Sbjct: 115 IPLYQKILAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEG 174

Query: 188 LKALWKGVGPAMARAGALTASQLATYDESK 208
           + ALW G+GP +AR   + A++LA+YD+ K
Sbjct: 175 VSALWTGLGPNIARNAIVNAAELASYDQIK 203

[Close]

BLAST of Lsi02G023420 vs. TAIR 10
Match: AT5G09470.1 (dicarboxylate carrier 3 )

HSP 1 Score: 84.7 bits (208), Expect = 9.5e-17
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 85  GPRSLYLGLSPALTRSVLYGGLRLGLYEPSKHA-SDLLFGSTNIFVKIGAGAISGAVATA 144
           GP +L+ G+S  + R +LY   R+G+Y+  K   +D L G+  +  KI AG I+GAV + 
Sbjct: 104 GPAALFSGVSATILRQMLYSATRMGIYDFLKRRWTDQLTGNFPLVTKITAGLIAGAVGSV 163

Query: 145 LTNPVEVLKVRLQMNPN-------STKGPIKEMSRIVSEEGLKALWKGVGPAMARAGALT 204
           + NP +V  VR+Q + +       + K  +  + RI  +EG+ +LW+G    + RA  +T
Sbjct: 164 VGNPADVAMVRMQADGSLPLNRRRNYKSVVDAIDRIARQEGVSSLWRGSWLTVNRAMIVT 223

Query: 205 ASQLATYDESKRV 210
           ASQLATYD  K +
Sbjct: 224 ASQLATYDHVKEI 236

The following BLAST results are available for this feature:

BLAST of Lsi02G023420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0G143	3.4e-19	35.26	Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum ...	[more]
O81845	1.7e-18	40.15	Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana OX=3702 GN=PUMP1 PE=1...	[more]
Q9ZWG1	9.3e-17	36.00	Mitochondrial uncoupling protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUMP2 PE=2...	[more]
Q9FY68	1.3e-15	36.84	Mitochondrial uncoupling protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUMP6 PE=2...	[more]
O97562	1.9e-14	36.80	Mitochondrial uncoupling protein 2 OS=Sus scrofa OX=9823 GN=UCP2 PE=2 SV=1	[more]

BLAST of Lsi02G023420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNT4	4.5e-83	83.10	Mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucumis melo v...	[more]
A0A1S3BSK0	1.5e-81	82.94	mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucumis melo O...	[more]
A0A6J1KWR8	1.6e-80	80.48	mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1H690	2.8e-80	79.52	mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucurbita mosc...	[more]
A0A5D3D3Z5	1.4e-79	72.54	Mitochondrial substrate carrier family protein ucpB isoform X1 OS=Cucumis melo v...	[more]

BLAST of Lsi02G023420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896316.1	1.1e-83	85.24	mitochondrial substrate carrier family protein ucpB isoform X1 [Benincasa hispid...	[more]
KAA0057543.1	9.4e-83	83.10	mitochondrial substrate carrier family protein ucpB isoform X1 [Cucumis melo var...	[more]
XP_008451426.1	3.0e-81	82.94	PREDICTED: mitochondrial substrate carrier family protein ucpB isoform X1 [Cucum...	[more]
XP_004148885.2	3.9e-81	82.46	mitochondrial substrate carrier family protein ucpB isoform X1 [Cucumis sativus]...	[more]
XP_031744485.1	3.9e-81	82.46	mitochondrial substrate carrier family protein ucpB isoform X5 [Cucumis sativus]	[more]

BLAST of Lsi02G023420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03115.1	1.8e-52	57.28	Mitochondrial substrate carrier family protein	[more]
AT3G54110.1	1.2e-19	40.15	plant uncoupling mitochondrial protein 1	[more]
AT5G58970.1	6.6e-18	36.00	uncoupling protein 2	[more]
AT5G58970.2	6.6e-18	36.00	uncoupling protein 2	[more]
AT5G09470.1	9.5e-17	36.84	dicarboxylate carrier 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 125..210 e-value: 1.3E-19 score: 69.9
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 40..117 score: 11.464664
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 125..209 score: 24.572508
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	1.50.40.10	Mitochondrial carrier domain	coord: 45..211 e-value: 3.8E-32 score: 113.2
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	103506	Mitochondrial carrier	coord: 40..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR45618	MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED	coord: 41..209
None	No IPR available	PANTHER	PTHR45618:SF21	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN UCPB	coord: 41..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G023420.1	Lsi02G023420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane