Homology
BLAST of Lsi02G023370 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 480.7 bits (1236), Expect = 2.4e-134
Identity = 241/582 (41.41%), Postives = 360/582 (61.86%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
M GLI F +SRL+AFCALS+S + Y+ + IE+PN F WN I+G+ ++ P
Sbjct: 76 MIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPK 135
Query: 61 MGFSFFRQMIRN---RVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQN 120
F ++QM+R+ D ++ K CA LG + + KL + V N
Sbjct: 136 ESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHN 195
Query: 121 GLIQNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEP 180
I + + AR+VFDE V+D+V+W +INGY + ++AI ++ M S V+P
Sbjct: 196 ASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKP 255
Query: 181 NEVTMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIF 240
++VTMI L+S+CS GD G+ +E+++ G+ ++ L+N ++DM+ KCG + AR IF
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 241 NNMERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE 300
+N+E+R + SWT++++GYA+ G L+ +RKLFD+M E+++V WNAMI G Q + +AL
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 301 IFHNMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDM 360
+F M P E T++ LSAC QLG L++G IH ++ K + +++ L +++DM
Sbjct: 376 LFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHR-YIEKYSLSLNVALGTSLVDM 435
Query: 361 YAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITF 420
YAKCG+I A +FH + +N +++ ++I A HG A A++ F++M +G PD ITF
Sbjct: 436 YAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 495
Query: 421 IGVLSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMP 480
IG+LSAC +G + G+ +F M+ F + P+ +HY+ MVDLL R GLL+EA L+ MP
Sbjct: 496 IGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP 555
Query: 481 MEASEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRM 540
MEA WGALL CR HGNVE+ + AA+KLLELDP DSGIY LL + + W D +
Sbjct: 556 MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKR 615
Query: 541 VRRMMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVY 580
RRMM ERGV+K+PG S IE+ G EF+V D S P S ++Y
Sbjct: 616 ARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIY 655
BLAST of Lsi02G023370 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 459.1 bits (1180), Expect = 7.4e-128
Identity = 230/598 (38.46%), Postives = 364/598 (60.87%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
M RTG + + AS+L A ALS + YA +F +I PN F WNT+I+ Y P
Sbjct: 53 MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPV 112
Query: 61 MGFSFFRQMI-RNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGL 120
+ F M+ ++ + +F F +KA A+ + LG ++H + K S++ V N L
Sbjct: 113 LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSL 172
Query: 121 IQNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNE 180
I Y L A +VF KDVV+W +MING+ + D+A+ LF M S DV+ +
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232
Query: 181 VTMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNN 240
VTM+ +LSAC++ + GR + +I + ++ L N MLDMY KCG + A+ +F+
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 241 MERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIF 300
ME +D +WT++L+GYA S D E+AR++ + MP+++IV+WNA+I+ Y QN +P EAL +F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 301 HNMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYA 360
H + + + TLV LSAC Q+G LE+G+ IH+ ++ K G++++ + +A++ MY+
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS-YIKKHGIRMNFHVTSALIHMYS 412
Query: 361 KCGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIG 420
KCG ++ + ++F+S+ ++++ W++MI A HG +A+ +F +M+ + KP+ +TF
Sbjct: 413 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 472
Query: 421 VLSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPME 480
V ACS+ V E + F ME +GI P+ +HYAC+VD+L R G L++A + I MP+
Sbjct: 473 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 532
Query: 481 ASEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVR 540
S WGALL AC+ H N+ +A++A +LLEL+P + G + LL+NI A KW +V +R
Sbjct: 533 PSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELR 592
Query: 541 RMMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQ 598
+ MR G+KK PG S IEI G HEFL D +HP S +VY ++E++ +EP+
Sbjct: 593 KHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 649
BLAST of Lsi02G023370 vs. ExPASy Swiss-Prot
Match:
Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)
HSP 1 Score: 442.6 bits (1137), Expect = 7.2e-123
Identity = 228/583 (39.11%), Postives = 343/583 (58.83%), Query Frame = 0
Query: 15 RLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPSMGFSFFRQMIRNRV 74
+L F G + YA+ LF +I P+ +WN MIKG+ + G + M++ V
Sbjct: 71 KLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGV 130
Query: 75 ELDCGSFVFALKACAQFAGKI-LGMAVHSVIWKLGFDSELLVQNGLIQNYVETRCLGFAR 134
D +F F L + G + G +H + K G S L VQN L++ Y + AR
Sbjct: 131 TPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMAR 190
Query: 135 QVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEVTMIALLSACSQKG 194
VFD +DV +W MI+GY R +E+I L M + V P VT++ +LSACS+
Sbjct: 191 GVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVK 250
Query: 195 DSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNMERRDVFSWTSLLN 254
D + + +HE++ S+ L N +++ Y CG + A IF +M+ RDV SWTS++
Sbjct: 251 DKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVK 310
Query: 255 GYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFHNMVDVVGLVPTED 314
GY + G+L+ AR FD+MP R+ +SW MI GY + E+LEIF M G++P E
Sbjct: 311 GYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM-QSAGMIPDEF 370
Query: 315 TLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAKCGSIDAAAKLFHS 374
T+V VL+AC LG LE+G+ I +++K ++ +++ NA++DMY KCG + A K+FH
Sbjct: 371 TMVSVLTACAHLGSLEIGEWI-KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD 430
Query: 375 MPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGVLSACSYGSFVSEG 434
M +++ +W +M+ A++G ++A+ +F QM+ +PD IT++GVLSAC++ V +
Sbjct: 431 MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA 490
Query: 435 QMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEASEGAWGALLDACR 494
+ F M IEP HY CMVD+L R GL+KEAYE++ KMPM + WGALL A R
Sbjct: 491 RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASR 550
Query: 495 KHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRRMMRERGVKKVPGH 554
H + MA+LAA+K+LEL+P++ +Y+LL NI A K+W D+R VRR + + +KK PG
Sbjct: 551 LHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGF 610
Query: 555 SLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEP 597
SLIE+ G HEF+ D SH S ++Y + EL S+F + P
Sbjct: 611 SLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLP 651
BLAST of Lsi02G023370 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 427.9 bits (1099), Expect = 1.8e-118
Identity = 217/566 (38.34%), Postives = 338/566 (59.72%), Query Frame = 0
Query: 23 SDSGDIHYAHLLFAQI-EHPNCFIWNTMIKGYCRTKYPSMGFSFFRQMIRNRVELDCGSF 82
S S ++ YA +F+ I P ++N ++ R+ P F++++ LD SF
Sbjct: 55 SSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSF 114
Query: 83 VFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLIQNYVETRCLGFARQVFDECSV 142
+ LKA ++ + GM +H V +K+ + V+ G + Y + +AR VFDE S
Sbjct: 115 LPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH 174
Query: 143 KDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEVTMIALLSACSQKGDSVMGRTL 202
+DVVTW TMI Y R +DEA LF M S+V P+E+ + ++SAC + G+ R +
Sbjct: 175 RDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI 234
Query: 203 HEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNMERRDVFSWTSLLNGYAKSGDL 262
+E + + +LL ++ MY GC+ ARE F M R++F T++++GY+K G L
Sbjct: 235 YEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRL 294
Query: 263 ESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFHNMVDVVGLVPTEDTLVCVLSA 322
+ A+ +FD+ ++++V W MI+ Y ++ P EAL +F M G+ P ++ V+SA
Sbjct: 295 DDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC-CSGIKPDVVSMFSVISA 354
Query: 323 CGQLGCLEMGKGIHN-DHVNKMGVQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLV 382
C LG L+ K +H+ HVN G++ L + NA+++MYAKCG +DA +F MP +N+V
Sbjct: 355 CANLGILDKAKWVHSCIHVN--GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 414
Query: 383 SWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGVLSACSYGSFVSEGQMHFESM 442
SW+SMI+A + HG A AL+LF +MK +P+ +TF+GVL CS+ V EG+ F SM
Sbjct: 415 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 474
Query: 443 ERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEASEGAWGALLDACRKHGNVEM 502
+ I PK EHY CMVDL R LL+EA E+I MP+ ++ WG+L+ ACR HG +E+
Sbjct: 475 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELEL 534
Query: 503 AKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRRMMRERGVKKVPGHSLIEIGG 562
K AA+++LEL+P+ G L++NI A ++W DVR +RR+M E+ V K G S I+ G
Sbjct: 535 GKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNG 594
Query: 563 KFHEFLVADTSHPHSSQVYRVVNELL 587
K HEFL+ D H S+++Y ++E++
Sbjct: 595 KSHEFLIGDKRHKQSNEIYAKLDEVV 617
BLAST of Lsi02G023370 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 424.1 bits (1089), Expect = 2.7e-117
Identity = 235/700 (33.57%), Postives = 374/700 (53.43%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLA-FCALSDSGDIHYAHLLFAQIE-HPNCFIWNTMIKGYCRTKY 60
+T+ GL N + ++L+A C L + +A +F E + CF++N++I+GY +
Sbjct: 55 LTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGL 114
Query: 61 PSMGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNG 120
+ F +M+ + + D +F F L ACA+ K G+ +H +I K+G+ +L VQN
Sbjct: 115 CNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNS 174
Query: 121 LIQNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNW------------------- 180
L+ Y E L AR+VFDE S ++VV+WT+MI GY R ++
Sbjct: 175 LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTP 234
Query: 181 ------------------------------------------------------------ 240
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Query: 241 -------LD----------------EAIALFNSMLSSDVEPNEVTMIALLSACSQKGDSV 300
LD EA+ +FN M+ S V P+ ++M++ +S+CSQ + +
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 301 MGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNMERRDVFSWTSLLNGYA 360
G++ H ++ R G N+ N ++DMY+KC TA IF+ M + V +W S++ GY
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 361 KSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFHNMVDVVGLVPTEDTLV 420
++G++++A + F+ MPE+NIVSWN +I+G Q S EA+E+F +M G+ T++
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 421 CVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPE 480
+ SACG LG L++ K I+ ++ K G+Q+ + L ++DM+++CG ++A +F+S+
Sbjct: 475 SIASACGHLGALDLAKWIYY-YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 534
Query: 481 KNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGVLSACSYGSFVSEGQMH 540
+++ +W + I A A G+A++A+ LFD M G KPD + F+G L+ACS+G V +G+
Sbjct: 535 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 594
Query: 541 FESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEASEGAWGALLDACRKHG 597
F SM + G+ P+ HY CMVDLL R GLL+EA +LI MPME ++ W +LL ACR G
Sbjct: 595 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 654
BLAST of Lsi02G023370 vs. ExPASy TrEMBL
Match:
A0A1S3BSJ4 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492719 PE=4 SV=1)
HSP 1 Score: 1122.8 bits (2903), Expect = 0.0e+00
Identity = 545/600 (90.83%), Postives = 567/600 (94.50%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
MT TGL++QIFPASRLLAFCALSDSGDIHYAHL+F Q EHPNCF WNTMIKGYC+ YPS
Sbjct: 75 MTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFWNTMIKGYCQANYPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
+GFSFFRQMIRNR E DCGSFVFALKAC QFA KI+GMAVHSVIWKLGFDSELLV+NGLI
Sbjct: 135 LGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWKLGFDSELLVRNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
QNYVET CLGFARQVFDE S+KDVVTWTTMINGY R+NWLDEAIALFNSMLSSDVEPNEV
Sbjct: 195 QNYVETGCLGFARQVFDESSIKDVVTWTTMINGYARSNWLDEAIALFNSMLSSDVEPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGDSVMG+TLHEHIR KGITCSVNLLN MLDMYVKCGCL TAREIFNNM
Sbjct: 255 TMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLDMYVKCGCLTTAREIFNNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVFSWTSLLNGYAK+GDL SARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE+F+
Sbjct: 315 ERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFN 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTLVCVLSACGQLGC EMG+ IH +HVNK+G+QVSLILKNAVMDMYAK
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSACGQLGCFEMGEEIHRNHVNKIGIQVSLILKNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHSMPEKNLVSWNSMISAYAS+GHAKKALTLFDQMK SG KPDHITFIGV
Sbjct: 435 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMKCSGLKPDHITFIGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVSEGQ HFESME CFG+EPKREHYACMVDLLS VGLLKEAYELIS+MPMEA
Sbjct: 495 LSACSYGGFVSEGQAHFESMESCFGVEPKREHYACMVDLLSGVGLLKEAYELISRMPMEA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEG GALLDACRKHGNVEMAKLA EKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR
Sbjct: 555 SEGVXGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQENG 600
MMRERGVKKVPGHSLIEI GKFHEFLVADTSH HSS++YRVVNELLLLSS IDFEP ENG
Sbjct: 615 MMRERGVKKVPGHSLIEIDGKFHEFLVADTSHTHSSEIYRVVNELLLLSSLIDFEPLENG 674
BLAST of Lsi02G023370 vs. ExPASy TrEMBL
Match:
A0A5A7USA2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002100 PE=4 SV=1)
HSP 1 Score: 1121.3 bits (2899), Expect = 0.0e+00
Identity = 543/600 (90.50%), Postives = 566/600 (94.33%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
MT TGL++QIFPASRLLAFCALSDSGDIHYAHL+F Q EHPNCF WNTMIKGYC+ YPS
Sbjct: 75 MTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFWNTMIKGYCQANYPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
MGFSFFRQMIRNR E DCGSFVFALKAC QFA KI+GMAVHSVIWKLGFDSEL V+NGLI
Sbjct: 135 MGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWKLGFDSELFVRNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
QNYVET CLGFARQVFDE S+KDVVTWTTMINGY ++NWLDEAIALFNSMLSSDVEPNEV
Sbjct: 195 QNYVETGCLGFARQVFDESSIKDVVTWTTMINGYAKSNWLDEAIALFNSMLSSDVEPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGDSVMG+TLHEHIR KGITCSVNLLN MLDMYVKCGCL TAREIFNNM
Sbjct: 255 TMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLDMYVKCGCLTTAREIFNNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVFSWTSLLNGYAK+GDL SARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE+F+
Sbjct: 315 ERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFN 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTLVCVLSACGQLGC EMG+ IH +HVNK+G+QVSLILKNAVMDMYAK
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSACGQLGCFEMGEEIHRNHVNKIGIQVSLILKNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHSMPEKNLVSWNSMISAYAS+GHAKKALTLFDQMK SG KPD ITFIGV
Sbjct: 435 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMKCSGLKPDRITFIGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVSEGQ HFESME CFG+EPKREHYACMVDLLS VGLLKEAYELIS+MPMEA
Sbjct: 495 LSACSYGGFVSEGQAHFESMESCFGVEPKREHYACMVDLLSGVGLLKEAYELISRMPMEA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEG WGALLDACRKHGNVEMAKLA EKLL+LDPEDSGIYSLLANICADGKKWNDVRMVRR
Sbjct: 555 SEGGWGALLDACRKHGNVEMAKLAGEKLLKLDPEDSGIYSLLANICADGKKWNDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQENG 600
MMRERGVKKVPGHSLIEI GKFHEFLVADTSH HSS++YRVVNELLLLSS IDFEP ENG
Sbjct: 615 MMRERGVKKVPGHSLIEIDGKFHEFLVADTSHTHSSEIYRVVNELLLLSSLIDFEPLENG 674
BLAST of Lsi02G023370 vs. ExPASy TrEMBL
Match:
A0A0A0K8Z0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390210 PE=4 SV=1)
HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 539/600 (89.83%), Postives = 561/600 (93.50%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
+T TGL+NQIFPASRLLAFCALSDSGDIHYAHL+F Q E PNCF WNTMIKGYC+ +PS
Sbjct: 75 ITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
MGFSFFRQMIRNR E D GSFVFALKAC QFA KI+GMAVHSVIWK GFDS+L VQNGLI
Sbjct: 135 MGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
QNYVET CLGFARQ+FDE SVKDVVTWTTMINGY RNNWLDEAIALFNSMLSSDV+PNEV
Sbjct: 195 QNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGDS MG+TLHEHIRRK ITCS+NLLN MLDMYVKCGCL TAREIFNNM
Sbjct: 255 TMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVFSWTSLLNGYAK+GDL SARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE+FH
Sbjct: 315 ERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFH 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTLVCVLSA GQLGCLEMG+ IH +HVNK+G+QVSLILKNAVMDMYAK
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHSMPEKNLVSWNSMISAYAS+GHAKKALTLFDQM GSG KPDHITFIGV
Sbjct: 435 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVSEGQ HFESME CFG+EPKREHYACMVDLLSRVGLLKEAYELIS+MPMEA
Sbjct: 495 LSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEG WGALLDACRKHGNVEMAKLA EKLLELDPEDSGIYSLLANICADGKKW DVRMVRR
Sbjct: 555 SEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSS-FIDFEPQEN 600
MMRERGVKKVPGHSLIEI GKFHEFLVADTSH SS++YRVVNELLLLSS IDFEP EN
Sbjct: 615 MMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVVNELLLLSSLIIDFEPLEN 674
BLAST of Lsi02G023370 vs. ExPASy TrEMBL
Match:
A0A6J1HB35 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111461192 PE=4 SV=1)
HSP 1 Score: 1068.9 bits (2763), Expect = 7.6e-309
Identity = 520/599 (86.81%), Postives = 557/599 (92.99%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
MT TGL+NQIFPASR++AFCALSD+GDIHYAHL+FAQIE+PNCF+WNTMIKGYCR K PS
Sbjct: 75 MTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
MGF FFRQMIRNRVELDCGSFV ALK C QFAGK + MAVHSV+WKLGF SELLVQNGLI
Sbjct: 135 MGFLFFRQMIRNRVELDCGSFVSALKVCGQFAGKAVRMAVHSVVWKLGFGSELLVQNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
Q YVE C+GFARQVFDE SVKDVVTWTTMINGYT NN LDEAI LF+ M SS+VEPNEV
Sbjct: 195 QYYVEIGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDLMSSSNVEPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGD VMGR+LHE I+RK I+ SVNL+NTMLDMYVKCGCL TAREIF+NM
Sbjct: 255 TMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDMYVKCGCLVTAREIFDNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVFSWTSLLNG AK+GDLE+ARK+FDEMPERNIVSWNAMIAGYSQNSQPMEAL++FH
Sbjct: 315 ERRDVFSWTSLLNGLAKNGDLEAARKVFDEMPERNIVSWNAMIAGYSQNSQPMEALKLFH 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGK IH++HVNKMG+Q+SLIL NAVMDMYAK
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKWIHDNHVNKMGIQLSLILNNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHS+PEKNLVSWN+MISAYASHGHAK+ALTLFDQMK SG KPDHITFIGV
Sbjct: 435 CGSIDAAAKLFHSIPEKNLVSWNTMISAYASHGHAKRALTLFDQMKHSGLKPDHITFIGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVS+G+ HFESME FGIEPKREHYACMVDL SRVGLLKEAYELISKMP++A
Sbjct: 495 LSACSYGGFVSKGREHFESMENTFGIEPKREHYACMVDLFSRVGLLKEAYELISKMPIKA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEGAWGALLDACRK GNVEMAKLAA KLLELDPEDSGIY+LLANICADGK+WNDVRMVRR
Sbjct: 555 SEGAWGALLDACRKQGNVEMAKLAAGKLLELDPEDSGIYTLLANICADGKRWNDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQEN 600
MMRERGVKKVPGHSLIE+GG FHEFLVAD SHPHS +VYRVVNELLLLSS ID EP EN
Sbjct: 615 MMRERGVKKVPGHSLIEVGGTFHEFLVADNSHPHSLEVYRVVNELLLLSSLIDLEPLEN 673
BLAST of Lsi02G023370 vs. ExPASy TrEMBL
Match:
A0A6J1KS94 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111497776 PE=4 SV=1)
HSP 1 Score: 1060.1 bits (2740), Expect = 3.5e-306
Identity = 513/599 (85.64%), Postives = 557/599 (92.99%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
M TGL+NQIFPASR++AFCALSD+GDIHYAHL+FAQIE+PNCF+WNTMIKGYCR K PS
Sbjct: 75 MICTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
MGF FFRQMIRNRVELDCGSFV ALKAC FAGK + MAVHSV+WKLGF S LLVQNGLI
Sbjct: 135 MGFLFFRQMIRNRVELDCGSFVSALKACGHFAGKAIRMAVHSVVWKLGFGSGLLVQNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
Q YVET C+GFARQVFDE SVKDVVTWTTMINGYT NN+LDEA+ LF+ MLSS+VEPNEV
Sbjct: 195 QFYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNYLDEAVMLFDLMLSSNVEPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGD VMGR+LHE I+RK I+ SVNL+NTMLDMYVKCG L TAREIF+NM
Sbjct: 255 TMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDMYVKCGFLVTAREIFDNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
+RRDVFSWTSLLNG AK+GDLE+ARK+FDEMPERNIVSWNAMIAGYSQNSQPMEAL++FH
Sbjct: 315 DRRDVFSWTSLLNGLAKNGDLEAARKVFDEMPERNIVSWNAMIAGYSQNSQPMEALKLFH 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTLVCVLSACGQLGCLE+GK IH++HVNKMG+QVSLI+ NAVMDMYAK
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSACGQLGCLELGKWIHDNHVNKMGLQVSLIMNNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHS+PEKNLVSWN+MISAYASHGHAK+ALTLFDQMK SG KPDHITF+GV
Sbjct: 435 CGSIDAAAKLFHSIPEKNLVSWNTMISAYASHGHAKRALTLFDQMKRSGLKPDHITFVGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVS+G+ HFESME FG+EPKREHYACMVDL SRVGLLKEAYELISKMPM+A
Sbjct: 495 LSACSYGGFVSKGREHFESMENTFGVEPKREHYACMVDLFSRVGLLKEAYELISKMPMKA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEGAWGALLDACRK GNVEMAKLAA KLLELDPEDSGIY+LLANICADGK+W+DVRMVRR
Sbjct: 555 SEGAWGALLDACRKQGNVEMAKLAAGKLLELDPEDSGIYTLLANICADGKRWDDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQEN 600
MMRERGVKKVPGHSLIE+GG FHEFLVAD SHP S +VYRVVNELLLLSS +DFEP EN
Sbjct: 615 MMRERGVKKVPGHSLIEVGGTFHEFLVADNSHPRSLEVYRVVNELLLLSSLVDFEPLEN 673
BLAST of Lsi02G023370 vs. NCBI nr
Match:
XP_038898970.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 1169.8 bits (3025), Expect = 0.0e+00
Identity = 565/600 (94.17%), Postives = 583/600 (97.17%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
MTRTGL+NQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCF WNTMIKGYCR +PS
Sbjct: 75 MTRTGLMNQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFFWNTMIKGYCRANHPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
MGFSFFRQMIRNRV+LDCGSFVFALKACAQFAGKI+G AVHSVIWKLGFDSELLVQNGLI
Sbjct: 135 MGFSFFRQMIRNRVQLDCGSFVFALKACAQFAGKIVGTAVHSVIWKLGFDSELLVQNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
QNYVE CLGFARQVFDE SVKDVVTWTTMINGYTRNNWLDEAI LFNSMLSSDVEPNEV
Sbjct: 195 QNYVEIGCLGFARQVFDESSVKDVVTWTTMINGYTRNNWLDEAITLFNSMLSSDVEPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSA SQKGDSVMGR LHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM
Sbjct: 255 TMIALLSASSQKGDSVMGRVLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVF+WTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQP+EALE+FH
Sbjct: 315 ERRDVFTWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPIEALELFH 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVD+VGLVPTED+LVCVLSACGQLGCLEMGKGIH +HVNK+G+QVSLILKNAVMDMYAK
Sbjct: 375 NMVDIVGLVPTEDSLVCVLSACGQLGCLEMGKGIHKNHVNKLGIQVSLILKNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAK+FHSMPEKNLVSWNSMIS YASHGHAKKALTLFDQMK SG KPDHITF+GV
Sbjct: 435 CGSIDAAAKIFHSMPEKNLVSWNSMISGYASHGHAKKALTLFDQMKRSGPKPDHITFVGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVSEGQ HFESMERCFG+EPKREHYACMVDLLSRVGLLKEAYELISKMPMEA
Sbjct: 495 LSACSYGGFVSEGQAHFESMERCFGVEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEGAWGALLDACRK+GNVEMAKLAAEKLLELDPEDSGIYSLLAN+CADGKKW DVRMVRR
Sbjct: 555 SEGAWGALLDACRKYGNVEMAKLAAEKLLELDPEDSGIYSLLANVCADGKKWKDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQENG 600
MMRERGVKKVPGHSLIEIGG+FHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQENG
Sbjct: 615 MMRERGVKKVPGHSLIEIGGEFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQENG 674
BLAST of Lsi02G023370 vs. NCBI nr
Match:
XP_008451419.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucumis melo])
HSP 1 Score: 1122.8 bits (2903), Expect = 0.0e+00
Identity = 545/600 (90.83%), Postives = 567/600 (94.50%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
MT TGL++QIFPASRLLAFCALSDSGDIHYAHL+F Q EHPNCF WNTMIKGYC+ YPS
Sbjct: 75 MTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFWNTMIKGYCQANYPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
+GFSFFRQMIRNR E DCGSFVFALKAC QFA KI+GMAVHSVIWKLGFDSELLV+NGLI
Sbjct: 135 LGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWKLGFDSELLVRNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
QNYVET CLGFARQVFDE S+KDVVTWTTMINGY R+NWLDEAIALFNSMLSSDVEPNEV
Sbjct: 195 QNYVETGCLGFARQVFDESSIKDVVTWTTMINGYARSNWLDEAIALFNSMLSSDVEPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGDSVMG+TLHEHIR KGITCSVNLLN MLDMYVKCGCL TAREIFNNM
Sbjct: 255 TMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLDMYVKCGCLTTAREIFNNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVFSWTSLLNGYAK+GDL SARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE+F+
Sbjct: 315 ERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFN 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTLVCVLSACGQLGC EMG+ IH +HVNK+G+QVSLILKNAVMDMYAK
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSACGQLGCFEMGEEIHRNHVNKIGIQVSLILKNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHSMPEKNLVSWNSMISAYAS+GHAKKALTLFDQMK SG KPDHITFIGV
Sbjct: 435 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMKCSGLKPDHITFIGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVSEGQ HFESME CFG+EPKREHYACMVDLLS VGLLKEAYELIS+MPMEA
Sbjct: 495 LSACSYGGFVSEGQAHFESMESCFGVEPKREHYACMVDLLSGVGLLKEAYELISRMPMEA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEG GALLDACRKHGNVEMAKLA EKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR
Sbjct: 555 SEGVXGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQENG 600
MMRERGVKKVPGHSLIEI GKFHEFLVADTSH HSS++YRVVNELLLLSS IDFEP ENG
Sbjct: 615 MMRERGVKKVPGHSLIEIDGKFHEFLVADTSHTHSSEIYRVVNELLLLSSLIDFEPLENG 674
BLAST of Lsi02G023370 vs. NCBI nr
Match:
KAA0057547.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18268.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1121.3 bits (2899), Expect = 0.0e+00
Identity = 543/600 (90.50%), Postives = 566/600 (94.33%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
MT TGL++QIFPASRLLAFCALSDSGDIHYAHL+F Q EHPNCF WNTMIKGYC+ YPS
Sbjct: 75 MTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFWNTMIKGYCQANYPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
MGFSFFRQMIRNR E DCGSFVFALKAC QFA KI+GMAVHSVIWKLGFDSEL V+NGLI
Sbjct: 135 MGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWKLGFDSELFVRNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
QNYVET CLGFARQVFDE S+KDVVTWTTMINGY ++NWLDEAIALFNSMLSSDVEPNEV
Sbjct: 195 QNYVETGCLGFARQVFDESSIKDVVTWTTMINGYAKSNWLDEAIALFNSMLSSDVEPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGDSVMG+TLHEHIR KGITCSVNLLN MLDMYVKCGCL TAREIFNNM
Sbjct: 255 TMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLDMYVKCGCLTTAREIFNNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVFSWTSLLNGYAK+GDL SARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE+F+
Sbjct: 315 ERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFN 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTLVCVLSACGQLGC EMG+ IH +HVNK+G+QVSLILKNAVMDMYAK
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSACGQLGCFEMGEEIHRNHVNKIGIQVSLILKNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHSMPEKNLVSWNSMISAYAS+GHAKKALTLFDQMK SG KPD ITFIGV
Sbjct: 435 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMKCSGLKPDRITFIGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVSEGQ HFESME CFG+EPKREHYACMVDLLS VGLLKEAYELIS+MPMEA
Sbjct: 495 LSACSYGGFVSEGQAHFESMESCFGVEPKREHYACMVDLLSGVGLLKEAYELISRMPMEA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEG WGALLDACRKHGNVEMAKLA EKLL+LDPEDSGIYSLLANICADGKKWNDVRMVRR
Sbjct: 555 SEGGWGALLDACRKHGNVEMAKLAGEKLLKLDPEDSGIYSLLANICADGKKWNDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQENG 600
MMRERGVKKVPGHSLIEI GKFHEFLVADTSH HSS++YRVVNELLLLSS IDFEP ENG
Sbjct: 615 MMRERGVKKVPGHSLIEIDGKFHEFLVADTSHTHSSEIYRVVNELLLLSSLIDFEPLENG 674
BLAST of Lsi02G023370 vs. NCBI nr
Match:
XP_004148898.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sativus])
HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 539/600 (89.83%), Postives = 561/600 (93.50%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
+T TGL+NQIFPASRLLAFCALSDSGDIHYAHL+F Q E PNCF WNTMIKGYC+ +PS
Sbjct: 75 ITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPS 134
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
MGFSFFRQMIRNR E D GSFVFALKAC QFA KI+GMAVHSVIWK GFDS+L VQNGLI
Sbjct: 135 MGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLI 194
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
QNYVET CLGFARQ+FDE SVKDVVTWTTMINGY RNNWLDEAIALFNSMLSSDV+PNEV
Sbjct: 195 QNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEV 254
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGDS MG+TLHEHIRRK ITCS+NLLN MLDMYVKCGCL TAREIFNNM
Sbjct: 255 TMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNM 314
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVFSWTSLLNGYAK+GDL SARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE+FH
Sbjct: 315 ERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFH 374
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTLVCVLSA GQLGCLEMG+ IH +HVNK+G+QVSLILKNAVMDMYAK
Sbjct: 375 NMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAK 434
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHSMPEKNLVSWNSMISAYAS+GHAKKALTLFDQM GSG KPDHITFIGV
Sbjct: 435 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGV 494
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVSEGQ HFESME CFG+EPKREHYACMVDLLSRVGLLKEAYELIS+MPMEA
Sbjct: 495 LSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEA 554
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEG WGALLDACRKHGNVEMAKLA EKLLELDPEDSGIYSLLANICADGKKW DVRMVRR
Sbjct: 555 SEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRR 614
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSS-FIDFEPQEN 600
MMRERGVKKVPGHSLIEI GKFHEFLVADTSH SS++YRVVNELLLLSS IDFEP EN
Sbjct: 615 MMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVVNELLLLSSLIIDFEPLEN 674
BLAST of Lsi02G023370 vs. NCBI nr
Match:
KAG6593151.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1070.5 bits (2767), Expect = 5.5e-309
Identity = 520/599 (86.81%), Postives = 557/599 (92.99%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
MT TGL+NQIFPASR++AFCALSD+GDIHYAHL+FAQIE+PNCF+WNTMIKGYCR K PS
Sbjct: 44 MTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLWNTMIKGYCRAKCPS 103
Query: 61 MGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLI 120
MGF FFRQMIRNRVELDCGSFV ALK C QF+GK + MAVHSV+WKLGF SELLVQNGLI
Sbjct: 104 MGFLFFRQMIRNRVELDCGSFVSALKVCGQFSGKAIRMAVHSVVWKLGFGSELLVQNGLI 163
Query: 121 QNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEV 180
Q YVET C+GFARQVFDE SVKDVVTWTTMINGYT NN LDEAI LF+ M SS+VEPNEV
Sbjct: 164 QYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIMLFDMMSSSNVEPNEV 223
Query: 181 TMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNM 240
TMIALLSACSQKGD VMGR+LHE I+RK I+ SVNL+NTMLDMYVKCGCL TAREIF+NM
Sbjct: 224 TMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLDMYVKCGCLVTAREIFDNM 283
Query: 241 ERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFH 300
ERRDVFSWTSLLNG AK+GDLE+ARKLFDEMPERNIVSWNAMIAGYSQNSQPMEAL++FH
Sbjct: 284 ERRDVFSWTSLLNGLAKNGDLEAARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALKLFH 343
Query: 301 NMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAK 360
NMVDVVGLVPTEDTL CVLSACGQLGCLEMGK IH++HVNKMG+Q+SLIL NAVMDMYAK
Sbjct: 344 NMVDVVGLVPTEDTLACVLSACGQLGCLEMGKWIHDNHVNKMGIQLSLILNNAVMDMYAK 403
Query: 361 CGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGV 420
CGSIDAAAKLFHS+PEKNLVSWN+MISAYASHGHAK+ALTLFDQMK SG KPDHITFIGV
Sbjct: 404 CGSIDAAAKLFHSIPEKNLVSWNTMISAYASHGHAKRALTLFDQMKHSGLKPDHITFIGV 463
Query: 421 LSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEA 480
LSACSYG FVS+G+ HFESME FGIEPKREHYACMVDL SRVGLLKEAYELISKMP++A
Sbjct: 464 LSACSYGGFVSKGREHFESMENTFGIEPKREHYACMVDLFSRVGLLKEAYELISKMPIKA 523
Query: 481 SEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRR 540
SEGAWGALLDACRK GNVEMAKLAA KLLELDPEDSGIY+LLANICADGK+WNDVRMVRR
Sbjct: 524 SEGAWGALLDACRKQGNVEMAKLAAGKLLELDPEDSGIYTLLANICADGKRWNDVRMVRR 583
Query: 541 MMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQEN 600
MMRERGVKKVPGHSLIE+GG FHEFLVAD SHPHS +VYRVVNELLLLSS ID EP EN
Sbjct: 584 MMRERGVKKVPGHSLIEVGGTFHEFLVADNSHPHSLEVYRVVNELLLLSSLIDLEPLEN 642
BLAST of Lsi02G023370 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 480.7 bits (1236), Expect = 1.7e-135
Identity = 241/582 (41.41%), Postives = 360/582 (61.86%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
M GLI F +SRL+AFCALS+S + Y+ + IE+PN F WN I+G+ ++ P
Sbjct: 76 MIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPK 135
Query: 61 MGFSFFRQMIRN---RVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQN 120
F ++QM+R+ D ++ K CA LG + + KL + V N
Sbjct: 136 ESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHN 195
Query: 121 GLIQNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEP 180
I + + AR+VFDE V+D+V+W +INGY + ++AI ++ M S V+P
Sbjct: 196 ASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKP 255
Query: 181 NEVTMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIF 240
++VTMI L+S+CS GD G+ +E+++ G+ ++ L+N ++DM+ KCG + AR IF
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 241 NNMERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE 300
+N+E+R + SWT++++GYA+ G L+ +RKLFD+M E+++V WNAMI G Q + +AL
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 301 IFHNMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDM 360
+F M P E T++ LSAC QLG L++G IH ++ K + +++ L +++DM
Sbjct: 376 LFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHR-YIEKYSLSLNVALGTSLVDM 435
Query: 361 YAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITF 420
YAKCG+I A +FH + +N +++ ++I A HG A A++ F++M +G PD ITF
Sbjct: 436 YAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 495
Query: 421 IGVLSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMP 480
IG+LSAC +G + G+ +F M+ F + P+ +HY+ MVDLL R GLL+EA L+ MP
Sbjct: 496 IGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP 555
Query: 481 MEASEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRM 540
MEA WGALL CR HGNVE+ + AA+KLLELDP DSGIY LL + + W D +
Sbjct: 556 MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKR 615
Query: 541 VRRMMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVY 580
RRMM ERGV+K+PG S IE+ G EF+V D S P S ++Y
Sbjct: 616 ARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIY 655
BLAST of Lsi02G023370 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 459.1 bits (1180), Expect = 5.3e-129
Identity = 230/598 (38.46%), Postives = 364/598 (60.87%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPS 60
M RTG + + AS+L A ALS + YA +F +I PN F WNT+I+ Y P
Sbjct: 53 MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPV 112
Query: 61 MGFSFFRQMI-RNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGL 120
+ F M+ ++ + +F F +KA A+ + LG ++H + K S++ V N L
Sbjct: 113 LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSL 172
Query: 121 IQNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNE 180
I Y L A +VF KDVV+W +MING+ + D+A+ LF M S DV+ +
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232
Query: 181 VTMIALLSACSQKGDSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNN 240
VTM+ +LSAC++ + GR + +I + ++ L N MLDMY KCG + A+ +F+
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 241 MERRDVFSWTSLLNGYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIF 300
ME +D +WT++L+GYA S D E+AR++ + MP+++IV+WNA+I+ Y QN +P EAL +F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 301 HNMVDVVGLVPTEDTLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYA 360
H + + + TLV LSAC Q+G LE+G+ IH+ ++ K G++++ + +A++ MY+
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS-YIKKHGIRMNFHVTSALIHMYS 412
Query: 361 KCGSIDAAAKLFHSMPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIG 420
KCG ++ + ++F+S+ ++++ W++MI A HG +A+ +F +M+ + KP+ +TF
Sbjct: 413 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 472
Query: 421 VLSACSYGSFVSEGQMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPME 480
V ACS+ V E + F ME +GI P+ +HYAC+VD+L R G L++A + I MP+
Sbjct: 473 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 532
Query: 481 ASEGAWGALLDACRKHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVR 540
S WGALL AC+ H N+ +A++A +LLEL+P + G + LL+NI A KW +V +R
Sbjct: 533 PSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELR 592
Query: 541 RMMRERGVKKVPGHSLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEPQ 598
+ MR G+KK PG S IEI G HEFL D +HP S +VY ++E++ +EP+
Sbjct: 593 KHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 649
BLAST of Lsi02G023370 vs. TAIR 10
Match:
AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 442.6 bits (1137), Expect = 5.1e-124
Identity = 228/583 (39.11%), Postives = 343/583 (58.83%), Query Frame = 0
Query: 15 RLLAFCALSDSGDIHYAHLLFAQIEHPNCFIWNTMIKGYCRTKYPSMGFSFFRQMIRNRV 74
+L F G + YA+ LF +I P+ +WN MIKG+ + G + M++ V
Sbjct: 71 KLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGV 130
Query: 75 ELDCGSFVFALKACAQFAGKI-LGMAVHSVIWKLGFDSELLVQNGLIQNYVETRCLGFAR 134
D +F F L + G + G +H + K G S L VQN L++ Y + AR
Sbjct: 131 TPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMAR 190
Query: 135 QVFDECSVKDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEVTMIALLSACSQKG 194
VFD +DV +W MI+GY R +E+I L M + V P VT++ +LSACS+
Sbjct: 191 GVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVK 250
Query: 195 DSVMGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNMERRDVFSWTSLLN 254
D + + +HE++ S+ L N +++ Y CG + A IF +M+ RDV SWTS++
Sbjct: 251 DKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVK 310
Query: 255 GYAKSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFHNMVDVVGLVPTED 314
GY + G+L+ AR FD+MP R+ +SW MI GY + E+LEIF M G++P E
Sbjct: 311 GYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM-QSAGMIPDEF 370
Query: 315 TLVCVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAKCGSIDAAAKLFHS 374
T+V VL+AC LG LE+G+ I +++K ++ +++ NA++DMY KCG + A K+FH
Sbjct: 371 TMVSVLTACAHLGSLEIGEWI-KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD 430
Query: 375 MPEKNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGVLSACSYGSFVSEG 434
M +++ +W +M+ A++G ++A+ +F QM+ +PD IT++GVLSAC++ V +
Sbjct: 431 MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA 490
Query: 435 QMHFESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEASEGAWGALLDACR 494
+ F M IEP HY CMVD+L R GL+KEAYE++ KMPM + WGALL A R
Sbjct: 491 RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASR 550
Query: 495 KHGNVEMAKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRRMMRERGVKKVPGH 554
H + MA+LAA+K+LEL+P++ +Y+LL NI A K+W D+R VRR + + +KK PG
Sbjct: 551 LHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGF 610
Query: 555 SLIEIGGKFHEFLVADTSHPHSSQVYRVVNELLLLSSFIDFEP 597
SLIE+ G HEF+ D SH S ++Y + EL S+F + P
Sbjct: 611 SLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLP 651
BLAST of Lsi02G023370 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 427.9 bits (1099), Expect = 1.3e-119
Identity = 217/566 (38.34%), Postives = 338/566 (59.72%), Query Frame = 0
Query: 23 SDSGDIHYAHLLFAQI-EHPNCFIWNTMIKGYCRTKYPSMGFSFFRQMIRNRVELDCGSF 82
S S ++ YA +F+ I P ++N ++ R+ P F++++ LD SF
Sbjct: 55 SSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSF 114
Query: 83 VFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNGLIQNYVETRCLGFARQVFDECSV 142
+ LKA ++ + GM +H V +K+ + V+ G + Y + +AR VFDE S
Sbjct: 115 LPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH 174
Query: 143 KDVVTWTTMINGYTRNNWLDEAIALFNSMLSSDVEPNEVTMIALLSACSQKGDSVMGRTL 202
+DVVTW TMI Y R +DEA LF M S+V P+E+ + ++SAC + G+ R +
Sbjct: 175 RDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI 234
Query: 203 HEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNMERRDVFSWTSLLNGYAKSGDL 262
+E + + +LL ++ MY GC+ ARE F M R++F T++++GY+K G L
Sbjct: 235 YEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRL 294
Query: 263 ESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFHNMVDVVGLVPTEDTLVCVLSA 322
+ A+ +FD+ ++++V W MI+ Y ++ P EAL +F M G+ P ++ V+SA
Sbjct: 295 DDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC-CSGIKPDVVSMFSVISA 354
Query: 323 CGQLGCLEMGKGIHN-DHVNKMGVQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLV 382
C LG L+ K +H+ HVN G++ L + NA+++MYAKCG +DA +F MP +N+V
Sbjct: 355 CANLGILDKAKWVHSCIHVN--GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 414
Query: 383 SWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGVLSACSYGSFVSEGQMHFESM 442
SW+SMI+A + HG A AL+LF +MK +P+ +TF+GVL CS+ V EG+ F SM
Sbjct: 415 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 474
Query: 443 ERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEASEGAWGALLDACRKHGNVEM 502
+ I PK EHY CMVDL R LL+EA E+I MP+ ++ WG+L+ ACR HG +E+
Sbjct: 475 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELEL 534
Query: 503 AKLAAEKLLELDPEDSGIYSLLANICADGKKWNDVRMVRRMMRERGVKKVPGHSLIEIGG 562
K AA+++LEL+P+ G L++NI A ++W DVR +RR+M E+ V K G S I+ G
Sbjct: 535 GKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNG 594
Query: 563 KFHEFLVADTSHPHSSQVYRVVNELL 587
K HEFL+ D H S+++Y ++E++
Sbjct: 595 KSHEFLIGDKRHKQSNEIYAKLDEVV 617
BLAST of Lsi02G023370 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 424.1 bits (1089), Expect = 1.9e-118
Identity = 235/700 (33.57%), Postives = 374/700 (53.43%), Query Frame = 0
Query: 1 MTRTGLINQIFPASRLLA-FCALSDSGDIHYAHLLFAQIE-HPNCFIWNTMIKGYCRTKY 60
+T+ GL N + ++L+A C L + +A +F E + CF++N++I+GY +
Sbjct: 55 LTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGL 114
Query: 61 PSMGFSFFRQMIRNRVELDCGSFVFALKACAQFAGKILGMAVHSVIWKLGFDSELLVQNG 120
+ F +M+ + + D +F F L ACA+ K G+ +H +I K+G+ +L VQN
Sbjct: 115 CNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNS 174
Query: 121 LIQNYVETRCLGFARQVFDECSVKDVVTWTTMINGYTRNNW------------------- 180
L+ Y E L AR+VFDE S ++VV+WT+MI GY R ++
Sbjct: 175 LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTP 234
Query: 181 ------------------------------------------------------------ 240
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Query: 241 -------LD----------------EAIALFNSMLSSDVEPNEVTMIALLSACSQKGDSV 300
LD EA+ +FN M+ S V P+ ++M++ +S+CSQ + +
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 301 MGRTLHEHIRRKGITCSVNLLNTMLDMYVKCGCLATAREIFNNMERRDVFSWTSLLNGYA 360
G++ H ++ R G N+ N ++DMY+KC TA IF+ M + V +W S++ GY
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 361 KSGDLESARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALEIFHNMVDVVGLVPTEDTLV 420
++G++++A + F+ MPE+NIVSWN +I+G Q S EA+E+F +M G+ T++
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 421 CVLSACGQLGCLEMGKGIHNDHVNKMGVQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPE 480
+ SACG LG L++ K I+ ++ K G+Q+ + L ++DM+++CG ++A +F+S+
Sbjct: 475 SIASACGHLGALDLAKWIYY-YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 534
Query: 481 KNLVSWNSMISAYASHGHAKKALTLFDQMKGSGQKPDHITFIGVLSACSYGSFVSEGQMH 540
+++ +W + I A A G+A++A+ LFD M G KPD + F+G L+ACS+G V +G+
Sbjct: 535 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 594
Query: 541 FESMERCFGIEPKREHYACMVDLLSRVGLLKEAYELISKMPMEASEGAWGALLDACRKHG 597
F SM + G+ P+ HY CMVDLL R GLL+EA +LI MPME ++ W +LL ACR G
Sbjct: 595 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 654
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9SJZ3 | 2.4e-134 | 41.41 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
| O82380 | 7.4e-128 | 38.46 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| Q9LSB8 | 7.2e-123 | 39.11 | Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... | [more] |
| O23337 | 1.8e-118 | 38.34 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
| Q9LUJ2 | 2.7e-117 | 33.57 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3BSJ4 | 0.0e+00 | 90.83 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mito... | [more] |
| A0A5A7USA2 | 0.0e+00 | 90.50 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A0A0K8Z0 | 0.0e+00 | 89.83 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390210 PE=4 SV=1 | [more] |
| A0A6J1HB35 | 7.6e-309 | 86.81 | pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cuc... | [more] |
| A0A6J1KS94 | 3.5e-306 | 85.64 | pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cuc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038898970.1 | 0.0e+00 | 94.17 | pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Benin... | [more] |
| XP_008451419.1 | 0.0e+00 | 90.83 | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g... | [more] |
| KAA0057547.1 | 0.0e+00 | 90.50 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18268... | [more] |
| XP_004148898.1 | 0.0e+00 | 89.83 | pentatricopeptide repeat-containing protein At2g22410, mitochondrial [Cucumis sa... | [more] |
| KAG6593151.1 | 5.5e-309 | 86.81 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G22410.1 | 1.7e-135 | 41.41 | SLOW GROWTH 1 | [more] |
| AT2G29760.1 | 5.3e-129 | 38.46 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G15930.1 | 5.1e-124 | 39.11 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G14820.1 | 1.3e-119 | 38.34 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G22690.1 | 1.9e-118 | 33.57 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
