Lsi02G022880 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATCCTCTCTTGTGAAGAAGAAAGAGAGTCAAAACAGAGCATACAAAGACAGAGTGAGAGAAAAAGTTATGACGACGTTGCGCAGATTTTGCTGCAATGATCTGCTTCGTTTCACTTCCGTCAATCTCGATCATCTCACAGAAACCGTAAATTTCTCTGTTTCAATTTCAGTTCCTCTGCTTTGAAAATGGTTTTCCGGTTTTTAAATGCGCTCTGAATGTTGTAGATGTCGATTCGGTGTTGATTCAATCTTCTTCGGCTTTTTTTTTTTTGCAGTTCAACATGTCCTTCTATATGACCTACTTAGCAAGATGGCCTGATTACTTCCATGTCGCGGAGGCCCCTGGGAGCCGCATAATGGGTTACAGTGAGTTTCGCCATTAGTTTGTTTTGCCAATAATTCTTTTCTCGTATTGTCCTTTCTTCTTGCTCGGATAGTTTCATCGTGTGCAACTTGGTTTTTGAGTTGTGGGTGTGGAATTTATTTATTGAATGGTTGGAGACACGCACATACACAGCTACTTCTTATTTGTATGGGATTGTTGATTCTGTTGAACTTTAGAGCCAAAGAATTGTAACTGTCAATTCATCCTCTGATTAGAACAACGAGCTGGGTCTTTTGTAGTAGGAACCAAATTATTAGATAACTAAAGTGAGTTCATTCAAAATATTGCGATCTTATTGACCTTTATTCCATGCTGTTTAAAATTTTTTGGTTTTTGTATGATTTGCCATTGCAGTCATGGGAAAAGTTGAGGGGCAAGGCGAGTCATGGCACGGTCATGTAACTGCTGTTACTGTTGCTCCAGAATATCGCAGGCAACAATTAGCTAAGAAGCTAATGAACTTGCTTGAGGATATTAGCGATAAAGTGTAAGATGAACATGATTATAATTATATATCTGAGAAACATTATTGTATGCATAACTAGATGTAAGATGGTAATATAACAAGACCTTGAAAAAAAATTTATTTCTGGTTCAAGGTTTAATGTTTAATTTAGTTTTTCTCTTCGCCTTGAACCTTATATTTAACGAGAGGCTTTTTTTTGCTTTCTGGCAGCGATAAAGCTTATTTTGTTGATCTCTTTGTGAGGGCATCGAACACCCCTGCAATCAAGATGTATGAAAAGGTAGATTTCCTCTTCTAGGACAGCCAACCATCAAGTCTTCTAAATTTTTAATTTGAAGTGTAGTTCTATCTTTGATGCTTCTTTTTTAAAGAAATGTGCCAGTGGAGTTGCATGCTACTCATATTATGATAGTTTAGTTTCTTAAGTCCTTATTAATACTTCAGTTCTATCAAAGTTGTATGCTGTCGAAGACTCAAAGTAATGAAATGTTCAGGAATACAAAACCTCCAGGTGGCANAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGTTCATAACTGAAGTAGGGTGAGAAAATCAGTAAGCTTGGAAACATAATATCTCTTTCCTCCCACTGGATCCAAATGTCATGTACAATCACTCTACTACTGTTCACCCAAATGGTTTTAGCCTTCCTTTCCAGGACACAGGAGACAAACACAAAGCATCAAAGAAATAAAGTTGACAAGCAACATAGGAGATATCATATTTAGGCTGAAAATGGTTAAAAGGTAGATCAGGCTCCGAAAGACCAAAGGATCAATAGTCTCATCTGCCTTCATATGCAGGCTACACCAATTTGGGAAAAGGAAGTTTACATTTTTTTTTGTTTGAACTTTGTTCTAAGAACCAATGGCTGTTAGTGCTAACAAAATACTCCATGTCAAGACCTTGGCCTTCTTTAGGTGATTATGCTTCCAACTAATATAATGTGACATAGTTCTGAAGGAAGACCAGCCTTGGTTTTCACTGAATAGAGTCAATGATCTTGATAGGTGAAAATAAGGCTGAGGAATCACTTCCAAACTTTGATGTCTTGTTGGTTAGTAATCCAACAATTTTCCAATTTTTACCTCCCTTTCCAATGGGAACCCTGCAGCCATTTAACAAAGTTGGTTCACATTTCTTTTCTTCAATTTCCAATGTCTAGCCCCATACTCTTTTGGTAAGTAGCAACATCCCTCCTGACCAAGTGGGAATCTCTATTGAAGTTAAGACCTTAAAAGTGTATGTAAACCTTTTTCCAAAATTAGGATACCATAGTGATTTCTGACATTAAAAAGATAAGGGGACGATATTCTTTGGGCCAAATAGCTAAACATTCCACCTGTCCAAGTGAGAATCTGTATCCAAGTTTGCTACTTCCTTAAAAAGATTTATAAACGTTTTACAAGATCTACATCATAATGGTTGCAACACTAGAAATATAATAAATCAGGAGACTGGGAGAAAATCTCGTAGAAGACTATGCTAGCAGCTAACCTACCACGTTAAAACAAAGGAGTTATTTATTTGGATTGTTTGTTTAAGACTCTATCTAACAATGAATTCCAAAAACTTTTAAGGCTTGTTCGGGAGGCTGGGATGTAATTAGGATTACTGGGAATCAAGTTTGCGATAGAATGTTAAAACCGGTGTCAGAATGGGATCATGAAGCGTGAAAATGGTGGAAAGAGAGTTAGGTTGAAAATGGTGGGAAGAGAATGTAATTATGATTACAAACTGGGCCCAAAGCCCTCAATCCAAACATGGGCTTGAGATTACAACCCATTACAAACCCATTACATTCCAGCCTCTCAAACATGTCCTTAGAGTCTTGGTTACCATGATGGGGAAGCCTAAGACAAAGTAGTGGTCAATCTTAAATACTCTAGCCAAACAAACCTGCCACCAATAGAACTTCTTAGAACAGTTCCTACCCACCATGGAAGATTCAGATAGATATACTTTAACCCACAAGCTTCATTTCATACATCAATGAATATTGAGAGATAAAGTTTCAATATGGAGAGACAATGAAATATGTTTCTTTTTTCAAAAAAAAAAAAAAATTTAACCCACAAACTTGTTCAAAAACCTTAATTTTATCGAACAATTTTTGTTCTGTTGGTGGCCAAAAGAGGAGAATGTTAGCAACAATAGTAAGATGGATGAAAGGAGGGGTAAGGATGGGAAAATTATCTAGTTCTAGTAGTAAGAAGAGAGATCATTAATTTCACTTCACAGGTCAATGTTGGAGAGAGGAAAAGTTACTCTTTGGACAATTATTAGCTTGGGGAGAAGTGGGTCCTTTCTTGCCTAGCCCCTGAAGCAATAATCTAACCTCTTAATTGGTGCTTGAAACGCAACCGAGAAACCCTTTCTCCCATTTATTTCCAAAACTTTTAACTTTTAGGATAGCAACCAAAAAGCTCCAGTTGACCTTATCATAAGCCCTCCTCTTGTCAAGCTTGAAGACAAATTTTCTCTTTCTTCTTTTATAACCATCAACAATGAAAGCCACAAGGATGCATTATTTGATTTGCTTCTACTAATGACAGCTGATTGGAAGTTAGAAATACTGCACTTATGCTTGATGCACGTTTTTATGTTGTTTGGCAAGGGCTTTCAGTGTCAAAATAAGCAGAGTAGTAAATTCAGAAATTTAATATTTACCATTTTAATTGTCCTCGCTCTATCTTCTAGTATGTATTCATTCAAAGCTAAACTGCTGTTCATTTTCAACTTTCTGCAAATGGTATCAGGTTTATTCCAGTTTTACAATGACCTCTTTGTGGAGTTCTTCTGAATGTTATGTAGTTTCTAAGACCCCAATTCCTCATGGTATAATAAGTAGTTTTAAAAAATATATATTTTTCCTGTTCATTGTAAGACTTTCATAATCCCTCCTGGGATCAAGTGTAGATTTTTCAGCCATTTTTGAGATATTTCTCCCGGTCCAAGTTTTTGGCTTTTCTGCAAATGGATTATATGGTCATGCTTTAGTAGCTTCTCTACATAGAAATTCATTACTATCTCGCCTAGTAGCTTCTCTACATAGAAATTCATTACTATCTCGCCTAGTTGTTATTTGTTCTGTGGAGATGGTTGAGAATGGATGGAAAAATATTGAAGATTGCGACAATACTTCATAGATGAGGAGGCGATTATAAATGAATCAATGATGCTTGTGTCTGCCAGACAGGTTGCAGTGTTATGGCTTTTTCATCATATACCTGTAACTGTGTATTGTCTTACGATAGAGTTAGACCCCAATACTGCATATGTATGCTAGGAGGGGTAGAAGGGGTAATTCGCCCACCTAGGGAGGGGTGATTAGACTATAAATATGTTTCTGTGTATCTTTTGGGGGGTTATCGCATTTTGTTATATTCTGGAGTGACCAGAAAGGGAGAGTCCTGCCCTTTTCAATAGTGGAGATCTTGTAACACAGTTGTTTGATAAATAATATATTGTCCAGTTAGTTTACAGATAGATAGTTATTATAGGTGTCCATTTAATTATTGGAATCTTAACCTAATAATTATTCATTAGGTTTATATATTTGTAATAAAATACCCAACATTAAATATAGTTCAACTGGATTAGGCACCTTAAACCAGAGGTTAGAGATTTGAATCCCCCACCCCAAATGATGTTACATTTATAGAGCACAGTTGTGTTTTTATAGGTTTCCCTGTTGGAATGAATTTTTGATCCTCATATCGAGGAAGGTGATATTTACCTTGGACATTTTCTTATTGTTTATTTCTTTCCCTCAACCAGCTTGACTATGTTATTTATCGGCGCGTGCTGCGTTATTATTCGGGGGAGGAAGATGGATTAGGTAAGTCGACCCTACCCCATAGAACTAAAGATATTTACCCCCCTCTGTTAGTCTCTTAATTTACTTTATTATGGTTCATATTCAGATATGAGGAAAGCATTATCGCGGGATGTCGAAAAGAAGTCCATCATCCCGCTAAAAAGGCCAGTGACTCCCGACGAACTAGAATATGATTAACTTAAGAGAAATGGAGTTTGATCATTGATGGAGAAGAAATATCATATGTACTCATTGAGTTGAGGATAGCAAGGTTAGCTATCGTCATCTTGAAAACATGTTGTACGTGTATCCCAAATATGTTTATTTAACTTATATTATCCTAATGAAAAATCAAGCTAAACCTTTTACTTCAACCATTTCATAGCTTGTAGTTAAACTTGGAACTGTTATTTCATTTAATTCCTTTTCAATGATCACCTGATGTTTTTGGATTACTCTTTTTCTGGACCTTTTGTTTTTAAGGTGAAGGATTCTTCACAAGATAGAAGAACCTCAATATCCTCAGAAGCTGTGCTGCCCTTGTATACCTTAATATGCTCTCAAGGATTTGCAATTGTTGAAGTAATAGTTGAAAGTTGTGAAGTAATTAATGGTCAATTGTTTGGTATTTTTTTAGTTATGCATACATTCAACTCATAAGACCAAGAATCAAGCTTTTAGCTTAAACGCTTCACTGAGACTTAAATTATTTTGGAGGGGTCTTTCCCTTTTTCAATTATAGGCTAAATTCATTCATATTCAATTGGTTAAGTGTTTATTTTTTCCCCTTCTTCTTAATCTCTTTGAATGAGTTTTCTCCTTTAAATCGGAATTGCTTTCTAATAATTGCAAAAATT CAAAATCCTCTCTTGTGAAGAAGAAAGAGAGTCAAAACAGAGCATACAAAGACAGAGTGAGAGAAAAAGTTATGACGACGTTGCGCAGATTTTGCTGCAATGATCTGCTTCGTTTCACTTCCGTCAATCTCGATCATCTCACAGAAACCTTCAACATGTCCTTCTATATGACCTACTTAGCAAGATGGCCTGATTACTTCCATGTCGCGGAGGCCCCTGGGAGCCGCATAATGGGTTACATCATGGGAAAAGTTGAGGGGCAAGGCGAGTCATGGCACGGTCATGTAACTGCTGTTACTGTTGCTCCAGAATATCGCAGGCAACAATTAGCTAAGAAGCTAATGAACTTGCTTGAGGATATTAGCGATAAAGTCGATAAAGCTTATTTTGTTGATCTCTTTGTGAGGGCATCGAACACCCCTGCAATCAAGATGTATGAAAAGCTTGACTATGTTATTTATCGGCGCGTGCTGCGTTATTATTCGGGGGAGGAAGATGGATTAGATATGAGGAAAGCATTATCGCGGGATGTCGAAAAGAAGTCCATCATCCCGCTAAAAAGGCCAGTGACTCCCGACGAACTAGAATATGATTAACTTAAGAGAAATGGAGTTTGATCATTGATGGAGAAGAAATATCATATGTACTCATTGAGTTGAGGATAGCAAGGTGAAGGATTCTTCACAAGATAGAAGAACCTCAATATCCTCAGAAGCTGTGCTGCCCTTGTATACCTTAATATGCTCTCAAGGATTTGCAATTGTTGAAGTAATAGTTGAAAGTTGTGAAGTAATTAATGGTCAATTGTTTGGTATTTTTTTAGTTATGCATACATTCAACTCATAAGACCAAGAATCAAGCTTTTAGCTTAAACGCTTCACTGAGACTTAAATTATTTTGGAGGGGTCTTTCCCTTTTTCAATTATAGGCTAAATTCATTCATATTCAATTGGTTAAGTGTTTATTTTTTCCCCTTCTTCTTAATCTCTTTGAATGAGTTTTCTCCTTTAAATCGGAATTGCTTTCTAATAATTGCAAAAATT ATGACGACGTTGCGCAGATTTTGCTGCAATGATCTGCTTCGTTTCACTTCCGTCAATCTCGATCATCTCACAGAAACCTTCAACATGTCCTTCTATATGACCTACTTAGCAAGATGGCCTGATTACTTCCATGTCGCGGAGGCCCCTGGGAGCCGCATAATGGGTTACATCATGGGAAAAGTTGAGGGGCAAGGCGAGTCATGGCACGGTCATGTAACTGCTGTTACTGTTGCTCCAGAATATCGCAGGCAACAATTAGCTAAGAAGCTAATGAACTTGCTTGAGGATATTAGCGATAAAGTCGATAAAGCTTATTTTGTTGATCTCTTTGTGAGGGCATCGAACACCCCTGCAATCAAGATGTATGAAAAGCTTGACTATGTTATTTATCGGCGCGTGCTGCGTTATTATTCGGGGGAGGAAGATGGATTAGATATGAGGAAAGCATTATCGCGGGATGTCGAAAAGAAGTCCATCATCCCGCTAAAAAGGCCAGTGACTCCCGACGAACTAGAATATGATTAA MTTLRRFCCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEAPGSRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDKVDKAYFVDLFVRASNTPAIKMYEKLDYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELEYD Homology
BLAST of Lsi02G022880 vs. ExPASy Swiss-Prot
Match: Q8LGI8 (N-terminal acetyltransferase B complex catalytic subunit NAA20 OS=Arabidopsis thaliana OX=3702 GN=NAA20 PE=1 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 1.3e-93 Identity = 163/174 (93.68%), Postives = 171/174 (98.28%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy Swiss-Prot
Match: Q8SSN5 (N-alpha-acetyltransferase 20 OS=Dictyostelium discoideum OX=44689 GN=nat5 PE=3 SV=2) HSP 1 Score: 219.2 bits (557), Expect = 3.8e-56 Identity = 103/172 (59.88%), Postives = 133/172 (77.33%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy Swiss-Prot
Match: P61599 (N-alpha-acetyltransferase 20 OS=Homo sapiens OX=9606 GN=NAA20 PE=1 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-55 Identity = 109/179 (60.89%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy Swiss-Prot
Match: Q2PFM2 (N-alpha-acetyltransferase 20 OS=Macaca fascicularis OX=9541 GN=NAA20 PE=2 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-55 Identity = 109/179 (60.89%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy Swiss-Prot
Match: P61600 (N-alpha-acetyltransferase 20 OS=Mus musculus OX=10090 GN=Naa20 PE=1 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-55 Identity = 109/179 (60.89%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy TrEMBL
Match: A0A6J1DAM6 (N-terminal acetyltransferase B complex catalytic subunit NAA20 OS=Momordica charantia OX=3673 GN=LOC111018408 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 7.3e-95 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy TrEMBL
Match: A0A6J1JXV7 (N-terminal acetyltransferase B complex catalytic subunit NAA20 OS=Cucurbita maxima OX=3661 GN=LOC111488846 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 2.8e-94 Identity = 172/174 (98.85%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy TrEMBL
Match: A0A6J1GMD9 (N-terminal acetyltransferase B complex catalytic subunit NAA20 OS=Cucurbita moschata OX=3662 GN=LOC111455828 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 6.2e-94 Identity = 171/174 (98.28%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy TrEMBL
Match: A0A6J1H568 (N-terminal acetyltransferase B complex catalytic subunit NAA20-like OS=Cucurbita moschata OX=3662 GN=LOC111460592 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 8.0e-94 Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of Lsi02G022880 vs. ExPASy TrEMBL
Match: A0A6J1KRE9 (N-terminal acetyltransferase B complex catalytic subunit NAA20-like OS=Cucurbita maxima OX=3661 GN=LOC111497993 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.0e-93 Identity = 171/174 (98.28%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of Lsi02G022880 vs. NCBI nr
Match: XP_022150161.1 (N-terminal acetyltransferase B complex catalytic subunit NAA20 [Momordica charantia]) HSP 1 Score: 356.3 bits (913), Expect = 1.5e-94 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Lsi02G022880 vs. NCBI nr
Match: XP_022992559.1 (N-terminal acetyltransferase B complex catalytic subunit NAA20 [Cucurbita maxima]) HSP 1 Score: 354.4 bits (908), Expect = 5.7e-94 Identity = 172/174 (98.85%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Lsi02G022880 vs. NCBI nr
Match: XP_022953216.1 (N-terminal acetyltransferase B complex catalytic subunit NAA20 [Cucurbita moschata]) HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93 Identity = 171/174 (98.28%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Lsi02G022880 vs. NCBI nr
Match: XP_023547653.1 (N-terminal acetyltransferase B complex catalytic subunit NAA20 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93 Identity = 171/174 (98.28%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Lsi02G022880 vs. NCBI nr
Match: XP_022959556.1 (N-terminal acetyltransferase B complex catalytic subunit NAA20-like [Cucurbita moschata]) HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93 Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of Lsi02G022880 vs. TAIR 10
Match: AT1G03150.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein ) HSP 1 Score: 343.6 bits (880), Expect = 9.4e-95 Identity = 163/174 (93.68%), Postives = 171/174 (98.28%), Query Frame = 0
BLAST of Lsi02G022880 vs. TAIR 10
Match: AT5G13780.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein ) HSP 1 Score: 104.8 bits (260), Expect = 7.3e-23 Identity = 57/151 (37.75%), Postives = 84/151 (55.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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