Lsi02G021680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G021680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
Location	chr02: 28138666 .. 28140352 (+)
RNA-Seq Expression	Lsi02G021680
Synteny	Lsi02G021680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGTAAAGGGATGCCTAATTTTTTTAAAAAAGCAACCCATTTCTGTCTGTCTCTCTCTTCCCTTACTCCTCTGTCCATGTCTGTCCCCCTCTCTTCCAATAACCCAAAATCCCCAATTCTTCTTTCTCTCTACCATTTTCATTTCATAATATAAATAACCCTAAAACCCACCCCTCATTTCTTTCAAATCTCAACCCCAACACTCCCAATTCCTTCTCATTTTCTCTCTTCAATTTACTAACCAAAATACCTTCTCCAATGGAGGTACATATCAATCCTAATTTCTTCGTCTTCTTCTTCTTGTTATTTTTAATTTTTAAAAACAGTTTGATATTTATATTATGGTTTGTGTTCCACAGGATTACTACTACCGGAGAAACTACATTCCCAGCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCTCACACTGCTTCGAAGCTTCTAGAATCGCCGGTTTCCCTCACGACACCGATCTCTACGTCGCCGGTGATTTGTACCAAAACGACGTCGTTACTCCTGCCATGATCGTCGTTCCTCGCCCCAGGGTTCGTATCTTCTTTAACTTCAATTTTGCTATTTTATTTTTCTTTTTAGAAAAAGAAAAGTGAAAATAATGAGTGGATCCACATGCTTCCTCTCTTAAGCATGCTCTTTGCTTTTTTACCTTTCTTTCAATGTACAAAAAAGAAAGTAAAACTACGTGATCGCCACGTGACATTGCATTCATTTTATTGTTATTAATAATAATAGAGGGAAAAAGGCTAAAATATATAAAGAAAGTAAATGAGTAGAGTATTGAAAAAGTAATAGTTGATAAAGAAATAATTTATGATGGTGCGGGTGATGCAGAGGAAGCGTGACAGGCAGGGGAAGCAAGGAAAGAAGGAAAATTGGATGAAGGAAACTGAAAGCCCTCCTAATGGAATGATGCATCATTATCCAAAGCCAATTCCTAAGCCAGTTGATGAAGATTTGTATAAAATCTCCCCTGATCTCCTTGCTGCCAAGACCAAAAAGGTCTTTTCACCTTTTTTTTTTTTTTAAAAAAAAAAAATTTTAGATTCCACTTTATTACAGTTTTACCTTAATCAACTTCACTTTTCCTTGGTAAAAACTTGTATGACTATTCTTTTCTTTTTTTTAAAAAAATAATAATAAATAAAAGAGCTTTCAATTTGAGAAAGATGGTATTTTTGGTTTGGATTGTGACATTACTTATTCCTTTGACAAATGTTGGTATAATACTCTTATTTTGTAACATTATAAATTGACTTCATTTTTTTTTTAAAAAAAATTACTAATTATATATATTAAATATTTTTTAAGTTAAAGTTTAAATAGACACAAACTTAAACTAAACTAATTTTGGTTATAGTTTTGAGAGAAAACATATTGGTTTTCTTATTTAATTTTGTAGGGTTGTAAATTAAATTATTTATATTTATATATGGTATTTGATATATTTTTGCAGAAGAGAGGGCTGAGTTACATAACAAATTGCTTTGTGCCAACTTGTTTGATTTGAAGAAGAAGGAAGAGATGATGAAGCTCAAAATTATGTGACAATGAATGTATATTTTTCTCATCAAAAAACAAACAGAGAGGCCAAATAGTACATATCTTTTGGAATGTTTGGTTATTAAATTCATATCATCATATTTATATATATATTATATCC

mRNA sequence

AAAAGGTAAAGGGATGCCTAATTTTTTTAAAAAAGCAACCCATTTCTGTCTGTCTCTCTCTTCCCTTACTCCTCTGTCCATGTCTGTCCCCCTCTCTTCCAATAACCCAAAATCCCCAATTCTTCTTTCTCTCTACCATTTTCATTTCATAATATAAATAACCCTAAAACCCACCCCTCATTTCTTTCAAATCTCAACCCCAACACTCCCAATTCCTTCTCATTTTCTCTCTTCAATTTACTAACCAAAATACCTTCTCCAATGGAGGATTACTACTACCGGAGAAACTACATTCCCAGCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCTCACACTGCTTCGAAGCTTCTAGAATCGCCGGTTTCCCTCACGACACCGATCTCTACGTCGCCGGTGATTTGTACCAAAACGACGTCGTTACTCCTGCCATGATCGTCGTTCCTCGCCCCAGGAGGAAGCGTGACAGGCAGGGGAAGCAAGGAAAGAAGGAAAATTGGATGAAGGAAACTGAAAGCCCTCCTAATGGAATGATGCATCATTATCCAAAGCCAATTCCTAAGCCAGTTGATGAAGATTTGTATAAAATCTCCCCTGATCTCCTTGCTGCCAAGACCAAAAAGAAGAGAGGGCTGAGTTACATAACAAATTGCTTTGTGCCAACTTGTTTGATTTGAAGAAGAAGGAAGAGATGATGAAGCTCAAAATTATGTGACAATGAATGTATATTTTTCTCATCAAAAAACAAACAGAGAGGCCAAATAGTACATATCTTTTGGAATGTTTGGTTATTAAATTCATATCATCATATTTATATATATATTATATCC

Coding sequence (CDS)

ATGGAGGATTACTACTACCGGAGAAACTACATTCCCAGCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCTCACACTGCTTCGAAGCTTCTAGAATCGCCGGTTTCCCTCACGACACCGATCTCTACGTCGCCGGTGATTTGTACCAAAACGACGTCGTTACTCCTGCCATGATCGTCGTTCCTCGCCCCAGGAGGAAGCGTGACAGGCAGGGGAAGCAAGGAAAGAAGGAAAATTGGATGAAGGAAACTGAAAGCCCTCCTAATGGAATGATGCATCATTATCCAAAGCCAATTCCTAAGCCAGTTGATGAAGATTTGTATAAAATCTCCCCTGATCTCCTTGCTGCCAAGACCAAAAAGAAGAGAGGGCTGAGTTACATAACAAATTGCTTTGTGCCAACTTGTTTGATTTGA

Protein sequence

MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHYPKPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVPTCLI

Homology

[Close]

BLAST of Lsi02G021680 vs. ExPASy TrEMBL
Match: A0A0A0KA54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66
Identity = 124/140 (88.57%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDYYYRRNYIPSFGNWEWNDHLPFSHCFE+SRIAGFPHDTDLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKPIPKPVDEDLYKISPDLLAAK 120
           VVPRPRRKRDRQGKQ KKE W     SP NGM H+Y  KP+PKPVDEDLYKISPDLLAAK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKW----GSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAK 120

Query: 121 TKKKRGLSYITNCFVPTCLI 140
           +KKKRGLSYITNCFVPTCLI
Sbjct: 121 SKKKRGLSYITNCFVPTCLI 136

[Close]

BLAST of Lsi02G021680 vs. ExPASy TrEMBL
Match: A0A6J1JQ37 (uncharacterized protein LOC111487931 OS=Cucurbita maxima OX=3661 GN=LOC111487931 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.1e-56
Identity = 107/142 (75.35%), Postives = 124/142 (87.32%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+ND++TPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDIITPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYPKPIPKPVDEDLYKISPDLLA 120
           VVPR RRKR++QGK+GKK NW   MKETESPP+ ++  +P+P PKPVDEDLYKI P+LL 
Sbjct: 61  VVPRHRRKREKQGKKGKKANWMMNMKETESPPHELL-QFPRPKPKPVDEDLYKIPPELL- 120

Query: 121 AKTKKKRGLSYITNCFVPTCLI 140
           AK++KKRGLS+  N FVP CLI
Sbjct: 121 AKSRKKRGLSFFANWFVPNCLI 140

[Close]

BLAST of Lsi02G021680 vs. ExPASy TrEMBL
Match: A0A6J1GPL2 (uncharacterized protein LOC111455979 OS=Cucurbita moschata OX=3662 GN=LOC111455979 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.9e-56
Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+NDVVTPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENW--MKETESPPNGMMHHYPKPIPKPVDEDLYKISPDLLAA 120
           VVPR RRKR++QGKQGKK N+  MKETESPP+ ++  +P+P PKPVDEDLYKI P+LL A
Sbjct: 61  VVPRHRRKREKQGKQGKKANYMNMKETESPPHELL-QFPRPKPKPVDEDLYKIPPELL-A 120

Query: 121 KTKKKRGLSYITNCFVPTCLI 140
           K++KKRGLS+  N FVP CLI
Sbjct: 121 KSRKKRGLSFFANWFVPNCLI 139

[Close]

BLAST of Lsi02G021680 vs. ExPASy TrEMBL
Match: A0A6J1KPV8 (uncharacterized protein LOC111497631 OS=Cucurbita maxima OX=3661 GN=LOC111497631 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.8e-54
Identity = 108/139 (77.70%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFEASRIAG+P   DLYVAGDLYQNDVVTPAMI
Sbjct: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHYPKPIPKPVDEDLYKISPDLLAAKT 120
           VVPRPRRKRDR GKQ K++ W   TESPP   +H  PKP+PKPVDEDLYKISP+   AK 
Sbjct: 61  VVPRPRRKRDRHGKQEKQQKW---TESPPQVTLHP-PKPMPKPVDEDLYKISPN-PCAKP 120

Query: 121 KKKRGLSYITNCFVPTCLI 140
           KKKRGLSYIT+CFVPTCLI
Sbjct: 121 KKKRGLSYITSCFVPTCLI 134

[Close]

BLAST of Lsi02G021680 vs. ExPASy TrEMBL
Match: A0A6J1H7P4 (uncharacterized protein LOC111460910 OS=Cucurbita moschata OX=3662 GN=LOC111460910 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.8e-54
Identity = 108/139 (77.70%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFEASRIAG+P   DLYVAGDLYQNDVVTPAMI
Sbjct: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHYPKPIPKPVDEDLYKISPDLLAAKT 120
           VVPRPRRKRDR GKQ K++ W   TESPP   +H  PKP+PKPVDEDLYKISP+   AK 
Sbjct: 61  VVPRPRRKRDRHGKQEKQQKW---TESPPQVTLHP-PKPMPKPVDEDLYKISPN-PCAKP 120

Query: 121 KKKRGLSYITNCFVPTCLI 140
           KKKRGLSYIT+CFVPTCLI
Sbjct: 121 KKKRGLSYITSCFVPTCLI 134

[Close]

BLAST of Lsi02G021680 vs. NCBI nr
Match: XP_038899118.1 (uncharacterized protein LOC120086508 [Benincasa hispida])

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDYYYRRNYIPSFGNWEWNDHLPFSHCF++SRIAG+PHDTDLYVAGDLYQNDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFDSSRIAGYPHDTDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKPIPKPVDEDLYKISPDLLAAK 120
           VVPRPRRKRDRQGKQG+KENWMKETESPPNGMM+HY  KP+PKPVDEDLYKISPDLLAAK
Sbjct: 61  VVPRPRRKRDRQGKQGRKENWMKETESPPNGMMNHYNTKPMPKPVDEDLYKISPDLLAAK 120

Query: 121 TKKKRGLSYITNCFVPTCLI 140
           TKKKRGLSYITNCFVPTCLI
Sbjct: 121 TKKKRGLSYITNCFVPTCLI 140

[Close]

BLAST of Lsi02G021680 vs. NCBI nr
Match: XP_004150335.2 (uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hypothetical protein Csa_016635 [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 5.3e-66
Identity = 124/140 (88.57%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDYYYRRNYIPSFGNWEWNDHLPFSHCFE+SRIAGFPHDTDLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENWMKETESPPNGMMHHY-PKPIPKPVDEDLYKISPDLLAAK 120
           VVPRPRRKRDRQGKQ KKE W     SP NGM H+Y  KP+PKPVDEDLYKISPDLLAAK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKW----GSPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAK 120

Query: 121 TKKKRGLSYITNCFVPTCLI 140
           +KKKRGLSYITNCFVPTCLI
Sbjct: 121 SKKKRGLSYITNCFVPTCLI 136

[Close]

BLAST of Lsi02G021680 vs. NCBI nr
Match: XP_023548222.1 (uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo] >XP_023548223.1 uncharacterized protein LOC111806926 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.6 bits (584), Expect = 1.7e-56
Identity = 110/142 (77.46%), Postives = 124/142 (87.32%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+NDVVTPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYPKPIPKPVDEDLYKISPDLLA 120
           VVPR RRKR++QGKQGKK NW   MKETESPP+ ++  +P+P PKPVDEDLYKI P+LL 
Sbjct: 61  VVPRHRRKREKQGKQGKKANWMMNMKETESPPHELL-QFPRPKPKPVDEDLYKIPPELL- 120

Query: 121 AKTKKKRGLSYITNCFVPTCLI 140
           AK++KKRGLS+  N FVP CLI
Sbjct: 121 AKSRKKRGLSFFANWFVPNCLI 140

[Close]

BLAST of Lsi02G021680 vs. NCBI nr
Match: XP_022991206.1 (uncharacterized protein LOC111487931 [Cucurbita maxima])

HSP 1 Score: 227.3 bits (578), Expect = 8.4e-56
Identity = 107/142 (75.35%), Postives = 124/142 (87.32%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+ND++TPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDIITPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENW---MKETESPPNGMMHHYPKPIPKPVDEDLYKISPDLLA 120
           VVPR RRKR++QGK+GKK NW   MKETESPP+ ++  +P+P PKPVDEDLYKI P+LL 
Sbjct: 61  VVPRHRRKREKQGKKGKKANWMMNMKETESPPHELL-QFPRPKPKPVDEDLYKIPPELL- 120

Query: 121 AKTKKKRGLSYITNCFVPTCLI 140
           AK++KKRGLS+  N FVP CLI
Sbjct: 121 AKSRKKRGLSFFANWFVPNCLI 140

[Close]

BLAST of Lsi02G021680 vs. NCBI nr
Match: XP_022953419.1 (uncharacterized protein LOC111455979 [Cucurbita moschata] >KAG6576033.1 hypothetical protein SDJN03_26672, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014554.1 hypothetical protein SDJN02_24732 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.5 bits (576), Expect = 1.4e-55
Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGFPHDTDLYVAGDLYQNDVVTPAMI 60
           MEDYY RRNYIPSFGNWEWNDHL FSHCFE+SRIAG+PHDTDLYV GDLY+NDVVTPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRQGKQGKKENW--MKETESPPNGMMHHYPKPIPKPVDEDLYKISPDLLAA 120
           VVPR RRKR++QGKQGKK N+  MKETESPP+ ++  +P+P PKPVDEDLYKI P+LL A
Sbjct: 61  VVPRHRRKREKQGKQGKKANYMNMKETESPPHELL-QFPRPKPKPVDEDLYKIPPELL-A 120

Query: 121 KTKKKRGLSYITNCFVPTCLI 140
           K++KKRGLS+  N FVP CLI
Sbjct: 121 KSRKKRGLSFFANWFVPNCLI 139

[Close]

BLAST of Lsi02G021680 vs. TAIR 10
Match: AT5G48500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-27
Identity = 69/156 (44.23%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 5   YYRRNYIPSFGNWEWNDHLPFSHCFEAS--------RIAGFPHDTDLYVAGDLYQN-DVV 64
           Y RR ++P+FG+W+WND +PF+ CFE +          A +P D DLY+AGDLY N  +V
Sbjct: 10  YCRRGHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGDLYDNHHLV 69

Query: 65  TPAMIVVPRPRRKRDRQGKQGKKENWMKE-----TESPPNGMMHHYPKPI-------PKP 124
            PA+I+VPR RR +  Q    KK N  K+     TE+         P P+       PKP
Sbjct: 70  APAVIIVPR-RRAKVGQEPAEKKRNVSKQQHNYKTEAREFNAPVSCPTPVVKRRMKAPKP 129

Query: 125 VDEDLYKISPDLLAAKTKKKR---GLSYITNCFVPT 137
           VDEDLYK+SP LL+ K+K+KR   G   I+ CF+PT
Sbjct: 130 VDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLPT 164

[Close]

BLAST of Lsi02G021680 vs. TAIR 10
Match: AT5G18310.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04
Identity = 43/162 (26.54%), Postives = 70/162 (43.21%), Query Frame = 0


Query: 2   EDYYYRRNYIPSFGNWEWNDHLPFSHCFEASRIAGF---PHDTDLYVAGDLYQNDVVTPA 61
           + Y  +   IP FG WE  + +P +  FE  R AG     + T    +     +   + +
Sbjct: 7   DTYKKKSGQIPRFGEWEEANEMPITQYFENPRQAGLIRHQYTTTSSASSTTTSSSSSSSS 66

Query: 62  MIVV-------PRPRR---------KRDRQGKQGKKENWMKETES---PPNGMMHHYP-- 121
                      PRPR           ++++G Q +  +   +++      NG+       
Sbjct: 67  SAEALKLASHHPRPRHLHAQRQTAGTKEKRGPQRRVRDVSAQSDKYYIDVNGVKQFKNDV 126

Query: 122 ----KPIPKPVDEDLYKISPDLLAAKTKKKRGLSYITNCFVP 136
               KP PKPVDEDLYKI P+ + + T+K+R  S++  C VP
Sbjct: 127 ALTCKP-PKPVDEDLYKIPPEFIHSSTRKRRP-SFLA-CLVP 165

The following BLAST results are available for this feature:

BLAST of Lsi02G021680 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G021680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA54	2.5e-66	88.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1	[more]
A0A6J1JQ37	4.1e-56	75.35	uncharacterized protein LOC111487931 OS=Cucurbita maxima OX=3661 GN=LOC111487931...	[more]
A0A6J1GPL2	6.9e-56	77.30	uncharacterized protein LOC111455979 OS=Cucurbita moschata OX=3662 GN=LOC1114559...	[more]
A0A6J1KPV8	3.8e-54	77.70	uncharacterized protein LOC111497631 OS=Cucurbita maxima OX=3661 GN=LOC111497631...	[more]
A0A6J1H7P4	3.8e-54	77.70	uncharacterized protein LOC111460910 OS=Cucurbita moschata OX=3662 GN=LOC1114609...	[more]

BLAST of Lsi02G021680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899118.1	1.5e-73	94.29	uncharacterized protein LOC120086508 [Benincasa hispida]	[more]
XP_004150335.2	5.3e-66	88.57	uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hypothetical ...	[more]
XP_023548222.1	1.7e-56	77.46	uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo] >XP_023548223....	[more]
XP_022991206.1	8.4e-56	75.35	uncharacterized protein LOC111487931 [Cucurbita maxima]	[more]
XP_022953419.1	1.4e-55	77.30	uncharacterized protein LOC111455979 [Cucurbita moschata] >KAG6576033.1 hypothet...	[more]

BLAST of Lsi02G021680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48500.1	3.0e-27	44.23	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G18310.2	2.1e-04	26.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..97
None	No IPR available	PANTHER	PTHR33699:SF2	PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED	coord: 1..138
None	No IPR available	PANTHER	PTHR33699	EXPRESSED PROTEIN	coord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G021680.1	Lsi02G021680.1	mRNA