Lsi02G021670 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATGGCTCGGAAGGTGGCGGTGATGGCGGTGGCGATATTGCTTGGCTTAGCGGAAATATCGGTGGCAATGGACGTGTGCGGCGTCAGTGAGGACGGTCTCACGGCGTGCAAGCCGTGGGTGACGAAACCGTGCCCTACCGAAGTACCGCCAGCCGTCTGTTGTGACAACCTCTCCAAGGCTGACTTTGATTGCTTTTGCAAATATAAGCACTCAATGTTGCTATCCTCATTTGGGATTGATCCTGATCTTGCTCTTGCTTTGCCAGCCAAGTGCAACCTCCCTAACACTACCCCTTGCTCTTAA ATGGAGATGGCTCGGAAGGTGGCGGTGATGGCGGTGGCGATATTGCTTGGCTTAGCGGAAATATCGGTGGCAATGGACGTGTGCGGCGTCAGTGAGGACGGTCTCACGGCGTGCAAGCCGTGGGTGACGAAACCGTGCCCTACCGAAGTACCGCCAGCCGTCTGTTGTGACAACCTCTCCAAGGCTGACTTTGATTGCTTTTGCAAATATAAGCACTCAATGTTGCTATCCTCATTTGGGATTGATCCTGATCTTGCTCTTGCTTTGCCAGCCAAGTGCAACCTCCCTAACACTACCCCTTGCTCTTAA ATGGAGATGGCTCGGAAGGTGGCGGTGATGGCGGTGGCGATATTGCTTGGCTTAGCGGAAATATCGGTGGCAATGGACGTGTGCGGCGTCAGTGAGGACGGTCTCACGGCGTGCAAGCCGTGGGTGACGAAACCGTGCCCTACCGAAGTACCGCCAGCCGTCTGTTGTGACAACCTCTCCAAGGCTGACTTTGATTGCTTTTGCAAATATAAGCACTCAATGTTGCTATCCTCATTTGGGATTGATCCTGATCTTGCTCTTGCTTTGCCAGCCAAGTGCAACCTCCCTAACACTACCCCTTGCTCTTAA MEMARKVAVMAVAILLGLAEISVAMDVCGVSEDGLTACKPWVTKPCPTEVPPAVCCDNLSKADFDCFCKYKHSMLLSSFGIDPDLALALPAKCNLPNTTPCS Homology
BLAST of Lsi02G021670 vs. ExPASy Swiss-Prot
Match: Q8W453 (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.0e-17 Identity = 50/103 (48.54%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of Lsi02G021670 vs. ExPASy TrEMBL
Match: A0A0A0K4Q7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 8.7e-40 Identity = 81/102 (79.41%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Lsi02G021670 vs. ExPASy TrEMBL
Match: A0A5D3D158 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002300 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38 Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Lsi02G021670 vs. ExPASy TrEMBL
Match: A0A1S3BHS9 (putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103489717 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38 Identity = 77/102 (75.49%), Postives = 88/102 (86.27%), Query Frame = 0
BLAST of Lsi02G021670 vs. ExPASy TrEMBL
Match: A0A6J1JMR4 (putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111488290 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.0e-32 Identity = 71/100 (71.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of Lsi02G021670 vs. ExPASy TrEMBL
Match: A0A6J1GPI5 (putative lipid-transfer protein DIR1 OS=Cucurbita moschata OX=3662 GN=LOC111456291 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.3e-32 Identity = 70/99 (70.71%), Postives = 80/99 (80.81%), Query Frame = 0
BLAST of Lsi02G021670 vs. NCBI nr
Match: KAE8646276.1 (hypothetical protein Csa_016013 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39 Identity = 81/102 (79.41%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Lsi02G021670 vs. NCBI nr
Match: KAA0041998.1 (putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa] >TYK17933.1 putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa]) HSP 1 Score: 168.7 bits (426), Expect = 2.6e-38 Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Lsi02G021670 vs. NCBI nr
Match: XP_008447223.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo]) HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37 Identity = 77/102 (75.49%), Postives = 88/102 (86.27%), Query Frame = 0
BLAST of Lsi02G021670 vs. NCBI nr
Match: XP_022991757.1 (putative lipid-transfer protein DIR1 [Cucurbita maxima]) HSP 1 Score: 149.1 bits (375), Expect = 2.1e-32 Identity = 71/100 (71.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of Lsi02G021670 vs. NCBI nr
Match: KAG6593049.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 148.7 bits (374), Expect = 2.8e-32 Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of Lsi02G021670 vs. TAIR 10
Match: AT5G48485.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 1.4e-18 Identity = 50/103 (48.54%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of Lsi02G021670 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 84.3 bits (207), Expect = 6.0e-17 Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Lsi02G021670 vs. TAIR 10
Match: AT5G55410.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 6.9e-05 Identity = 33/104 (31.73%), Postives = 54/104 (51.92%), Query Frame = 0
BLAST of Lsi02G021670 vs. TAIR 10
Match: AT5G55410.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 6.9e-05 Identity = 33/104 (31.73%), Postives = 54/104 (51.92%), Query Frame = 0
BLAST of Lsi02G021670 vs. TAIR 10
Match: AT2G37870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 3.4e-04 Identity = 34/105 (32.38%), Postives = 53/105 (50.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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