Lsi02G021630 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G021630
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic
Location	chr02: 28049979 .. 28057313 (+)
RNA-Seq Expression	Lsi02G021630
Synteny	Lsi02G021630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGCACGATGGAGTAGCAAGAGAAACCGTAAAATTACTTCAAATCTATAACCAACCAATGATAGAAACAATGTTTCCCAATCTTGTGCACCAGCAGCACTTCAAACTTCACCCAAAAACGGATAAACCTTAAACCCAAAGATCCAAGCTAAAACCCCAGCCATATTTTCAATTGAGCAACCAATTCAAGAAGATGAACAGCAGCCTCCGGCTGTTTCCAACTTGTTCGTGTTCATACCGACTACCCACAAATCCGAAACCAACTTCGCTGTTTTTCATCAACAATCCTGCCCACTTTCTGCATTTGAAGCGAGCCAAGAGGAAGCAGCAATTAGCATTGTGTACCAGTTATGAAGTCGGTGGAGGTTATCCGGAGGAGGAGTTGGATATGCAAGATAGAAGACGACCCAGAAAAGAAGTGAAGCCGAAAATGGACACTTCCGAGTACGAAGCTCTCCTTAAAGGAGGCGACCAAGTCACATCGGTTCTTGAAGAGATGATTGTCCTCGTAAGTTCTTTCTAATTTTCCTTGTTCAGATATTCTCTTTCTGGTTTAATTGAACATACAATAGAGTTTTCTGGATGGTTTCAGACTAAGAATCGAAAGTTTTTATAGTAATGTAGAGCTGAAACCCAGCTGACTGATGGGTTAATAAGAGGGGTGAGGATTGCTTAGCCGGTATACATATTACATGTGTCAACTGTTACATTAGTGTACAGGTGATGAGTAACAGATAAGTGTATTATCAAGTTAGCTGGAGGGGAAATCAAGAATGGTCAGCTAGCTTCGAAACTCAGCTAATGATAGGTAATGTGTTCTGTCATGAAGTGCCTTGAATTTTGAGTGGAATACTGGAGTTAAGGTAAGGGAGGCGGCTCCCAAGTTTTCACACAATTCTATGGGGGTTTGCTTGAGAGAAATGTGCAGCTCTAGTAATATAGAAAGCAGCCAAACAACTTCAGCTTGTACAACAGTTAGGGCTCGATATTCGGGTCTTGATACCTGCCGAAGAGACGGAGGACTGTGTTTTTGAGCTCCATGATACCAAATTCCCATTGAGGACTACCGATTTTCTATCAGATTTGTTGCTGGCCCAGTCTTAATCAACATGTGACAGTATCCCAAATGGAGAGGACAATGAGTGAAACTTGGTGTCCTCTGAGAGAGTGCCTTTGATGTACTGAAGTATTTGTTTTACATGCCTTCCAATGTTACTTGTTGATACTGAAGAATGGTTCAATGGTGAATTATGTATTTTTGGGGAAAAAAGAGAACCAATGCCCTACAAGGCAAAGAACACTGGACATTGTGTTGGTGTCATTACACATACTCCAACGCTCAAGTTAGAATCAAGTTTGTAAAATGGCTCAACGAATAGGAAGGTAGCGTTCAACATACCTTTCATGGTCCATACTCCTTTGCTTATGCAGAACCTCTCTTTCGTAACAAAGTATAGACTCATTACTCTCGTAACGAAAACCTTTTGGAACTCTAGAGCTGTTACAGGTCGCACCATGATTGAAGTGGTTATATAATCATGGCCTCCACAAACTTGGGACTTAACTCAACCTTTAAGGACTTATCCCATCATGCTCACCCCAGGCCATCTTGAATTAGCCTTAGCCCGTTCTTGGACAAACTGTCCAGGATCTCCAGCCAACTACTTGTAGGATCAACTCAGGAATTTAAGCTCGACTCCTAGCTTTGTTAAACAACTTTGGCCGACCCATACATGGGCCACTCAAATTGGGCCTTGGTCGACCCCTACATGGGTAGGCCAAGGCCTAGTTGCTGACCCATACATGGGTAGGCGAGGGCTTGGTTGCTGACCCATACATGGGTAGGCGAGGGCTTTGAGTGGCCAACCATGTAGGGGTTGGCCACTCAAGGCTTTTGCTGAGCCATGTATGGACTGGTCACCTAGGCCTTGGCCTGCCCATATATAGGTCGTCTTCATGGACCTGGATCCTTTTACTATTAGGCCTGGGTCTTGGGTTCAACCTACTTGAGGAAACTCTCCCACAACATTACGCAATGGGAGAGGATGTGCATTGACTCAGTTTGAGTTTGTTAATTGAACTAGAGAGCTGGGTCTTGGGCTCAACCTACTTGAGGAAACTCTCCCACAACATTACGCAATGGGAGAGGATGTGCATTGACTCAGTTTGAGTTTGTTAATTGAACTAGAGAGCTGGGTCTGTAATGGTTGAGTTTGGAAGATCTCTAAAGATACTGCAATATTATAATGTTGGATTAGAAAATAGATTTGAATTCAGTTGATCAAGAGACATGTCAGGTGCTTCTGATATTGGCATGGCTTTGCATCTTCTGTTGCATTTTTAATCTTCATTTGCTTGCATATAGTGTTTTCAAGGTATAGCTAGGGCTCACCTATCACCTACATTGCATGTAGCAGATGCATGGCATCCACATTCAAAGGTGTTCATGCCATGATTGCCATTTAGAAGGTGATGGCATTTGAACATTAAACAACCGGAGCAAAATTCAATAGAAAAGAAAACATCATCAATTAAAATTTCTTTGAGATATCAATGTGCATTATTGTATTCTAATTATTATAATATTTGTGCCACTAACAACTAACATTCTATTCCTTGTCTGGGTTTGTTTCTGTTGTCTCAGTTGGAAGATACGAACACTGATGAAACATCTGAAGAGATAGCTTTGCAGTTGGCTGCACAAGGTGTCATAGGTAAAAGGGTTGATGAGATGGAGTCAGGATTTATGATGGCCTTAGACTACATGATCCAGATTGCTGAAAATGACCAAGATGATAAGGTGAAAGGTCCATCTCCATCTTAAATTCTCTACGTTCCTTAGCTTTGATATGAAGCTTTATTTTTTTTTTGTTGTTTTCTTTTTTGGCATATCAAAACTTAGAAGTTTCTATTAAAATGAAATTGAGGAACAAAAAAGTAGGTAGTGAAATGATAACTAATTGAGCTTGCTTTATTTGTCAAAAAAAAAAAAAAAAAAAGAGCTTGCTTTAAGTTACCTACTTTATAACAAGGACTAAAATATTGATGTTGCTGTCAATATCGAGATTTCAATACTACAGATATATCGATAAAATACCAATATAGAAAGATATGCATATAAATCAAATAATTTAAATGAATAATTAAGTTCTTTTCATCTTCTCAGTAAGTTTTAGATCTTATAATTAGTATTTATATGTACTTTTGAAACAAATACATCTTTTCATTGATATAGCGAAAGGATGCAACAAATGTTCAAAGGAAACGGACTCTTAAAAGGAGTGAAATAAAGCAAAGTGAAGAAATTAGAAAAATAATATGCGGAGCTCAAGCGAGGGGAAATAAAGGCACCCCGAATCATACAAATCTTCCTTGGAGAATAATCTTTTCTGAAAAGGAGATGAGACTTTTTTTTAATATAATAAAAAGAGTCTAATGCTCAAAATACAATAGTTTAGAAATTGAAAATAAAAGTATATTGCTCGGAGAATAATGAATAAACAAATTAGAAAACCATTGTCAAGAATTTGAAGATGGCTAAATCAAAACACTTCATTCAAATTCTAGAACTGTCTTCAATTAACCTTTGATTCCTCTCAAACCAAAATCTTGAAAGTTAATTGCATCATGGATAAAGCAATTAAATTTAGATCCCATTGGACTTAATTTTTGTTTTTTTGCGTTTTAGTTTCCTTGTTGTTTCATAATGTGATCTAAAAGAGTTGTTTTGAACTCATCTGTTTATTTCTTTCTTTCTCATTCATTGAAGTAATGCATTTTATTTTATTGTTTCTATTCAGCGCAAGGCAATACTGGAGGTGGTGAAGGAGACAGTTCTATCTCATCTCACAAAAAAATGCCCGCCCCATGTATGAACGTTATTGTGAAGAAAAATGGTGTTTTGTTCTATTCATGTTTCATCTGTATGTTGTTTTGACCAACATTATGAGCTGAATAGTAAACTGAGCTCTCTCTGATTTATAGGTTCAAGTGGTCGGCCTACTTTGTAGGACTCCATTGAAAGAAAGCAGACATGAACTACTTCGAAGAGTTGCTGCTGGGGGTGGTGTCTTTAAAAGTAAAAATGGCACCAAAGTTCATATCCCAGGAGCAAATCTTAACGACATTGCCAACCAAGCTGATGATTTAGTAGAGGTAATTATTATTATTGTTGTTGTTATTTTGATATGAAGCAAAAACCACGTCATTGATTTATGCAATAGAATACAGAAGGGTAGGGAGTCTTATAGAGAAATAGTTACAAACCCCTCCCACTTTCTGTTTCTATCCATGTCCGTTTCTGTGTCTATAAATATTGAATAATAGTTTTCTAATGTAACTATTCTCATTCACAATTATTTTAAAGACAATGGAAACTCGGCCAATTGTACCTGATCGAAAACTGCTTGCAAGGCTTGTTCTGATTAGAGAAGAGGCTCGGAATATGATGGGAGGTGGACTTCTGGATGAAAGAAATGATCGTGGTCTAAGTACTCTTCCTGAATCAGAGGTAGGCAATATGCATGCTTTTGGTAAACTTCACATCACATCATTTGATCTGACGGTTCCATAAATCTATTCTATCAACTTACTTAAACTCTGTTCCTAAGAAATTTTACAACAATATGGAATATCGTTCATGTCATGTTTTTGTTGCTATTTCTATTCTATTCCTATCATTAATTTGAGAAAGAGAGTCCATATATTGACGAAAAGAAAATGGGTACAAGAAACAGGAGGGAAATTACAAAAACACCCTGGCACTGACATTGATAAAAAGAATAAATGAATATAAATATTCTAATTTTGTGAGCCCCAATTGGAGGCGACAATGTACAAGTTCTACGAAGTCATTCTTTTAATCCATCAAAGGTTTTCTTATTCCTTTTCTGGCAAGATACTCCACACTGTCTATTAAATCCAGCAATATCCTTGTTGGTTGTATATGGCTGCTGTATATATGACCTAGATCATTTAGGAGTGTTATTCAGTCTGTAGTTTGTTAAATTATGGTTACCTGATTTGTCGACATATTCAGTAGCATTTCTAGCGTACAACTACATCTGTATACTATACATGCTTAGGTTCTTTTAGGAAAAAATTGGTTTTGGTTAGTGAGCGCATTTTCCCCCCAATCTTTTCACTCTTGTATTTTCTTGACCTAACTTATAGTTTTCTTTCTCTTCTCACTGGTAAGAAACTGACTTGATTGTAGTGATCAAACGTCCCAAAAGTCTTAGTTCAAAAACAAAATTTCTGGCCATGGGCCTGGGAATATATGCACTACTATGGTAAATATAATTGTACAAGATCTCAAAGTTCAATGAGACATGCTGTATGAAATTCTATTCTGACAGAATATTAGACTATAGATGTTGCATATAACCCCGGGGCAACCAAACACATGGAAATGCATTGACTCTTCATAGAGAAAGTGGTTAAACTGCAATAGTTTCATGGCAACCAGGAACCAATTGGTTGTGCACTAACTAATGGGAAGTTGGGAGGGGATTCCTTTTCAACTGAAAGAATTATCAGGAGGTGACCCTATGATTGATTAATCCCATGGATGCATATCATTATGTAGAGGATGAGGGGTGACAAGATCACTCACTGTGTTGGTGCCAATATAGTAGATGTTGGGAGGCGCCCCTACCCAAATTAACTGTAATTGGGTGCTGAAAAATCCAGCTAGAGAATGTGATTAATGTATTCCAAGAAGACAAAAGAGACGAGTTTGGATTCTCTCTCCCACTCAAAAGTATTCTGTCCGAAGAGTTGATTTACAATGGGAAAGAGTCAAAATAAGAACTGTTGGAGATCTTTCATTTCCAAATATGCTACAAAACTCATTTTTGGAAGAGCTTGATCAGATCATTTATCCATTATTATAGATGGAGGTACAAAGTCATTTTTTTGCAGTCTTAACATTTTTCCTTTGGTTAGCCTGACGAAGGAAATGGAATCATTCCATTAACTTCTAAGTCATGCAGATTACTTCTAAATCCCAAACTACAACTGGCATAAGTGACATCTGAAACAGCCTCGATGCAATTCAATTTGAGAGTTGAAAGACTAAATGTTCTAAGAAGGGTTTCTTATGAGTGGTTTTCCATTGATCCCAACATCTTCCTTAAACTTCATTATTTAACAGTTACCGGCTCATACTTGAGATTGTTATATCATGATGGAGGATGTACTTTCACCCACATTTTTGTGATAAGAGTTGTGTTCTATGGCACCTTTTCTCCCCTGTTCTAGATTATATGGGTTCAGAGGAACAGGAGAACTTTTAGAGCGTCTGAGAGGTTTGTGACAAGTATAATACCTCTCTCCAAGTGTTGGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGAGTTCTCTTTGAATGGTGTAACTAAGGACTTTGGTATTATCCTCTTTGTCTTATTCGTTTGGCTGGGAGTCTTTTTCTGTCTGATTAGGTCAGTTGTTATTTTGATCCTCTTGGTAATTGTTTCTTATTGGTCCTTTTGTTTTCTTTCATTTTTTTTCTCCACGAGAGCTCCATTTCTCTAAAGCAATTCAGTAAGCAGAGAGAAGACACATTCTTCTTTTTATGTTTATCAGCATCTTGGCCTCTATATTTTTTTGGCAAACAAACAACTTTCAATTAATAATGCTTGGCCCTTTATAGGTTCCATATAGCCTCCATAATAAATCTCTTAAAAGTTAAAACCCTCGCCAGCATATTAGCTGCACGGCTGGTGCAAATTTAGATAGGTTTGACGTGTAATTGGGTCAATATATCCCTGGTTTACAGGCAACAACAATTGCTGTTGAGTATTTGTCTTACTCATTTCTAATGCTAGTACAACAATTTGTCGTTGTCCTCACTCATTGCCAATTAGTACATTCATATAATCCTTTTGGTGCAGGTGAACTTCTTGACCAAACTGGTTGCTTTGAAACCAGGGAATGTTGTCCAGGAGATGATACGAAATGTAATGTTAGGTAAAGATGAAGGGGCCGATAACTCAGGTGATGATGAGGAAGATGCTGCAGGTGGTCGGAGGGCTTCAAGGGGAATTTCAGGAAGGGTGGGTCTTAAATCCAGTCCTTGGATGCTTGAACAGAATGTTTACATGTGTTGTGGGATTGTCTGACTTGCTTTATGCTTTCTTTGTCCATGGTTACTAGGAAAGTGTTTCGGGGCGGAAGCCACTTCCAGTTCGTCCAGGCATGTTTCTAGAAACTGTATCCAAGGTAAGATTCTTGCTTGTTTGTAGTCATTTAATGGATTCTGATGGATTGTTATGTGATCGTGACCTGATGATCTAAAGTTT

mRNA sequence

TTTTGCACGATGGAGTAGCAAGAGAAACCGTAAAATTACTTCAAATCTATAACCAACCAATGATAGAAACAATGTTTCCCAATCTTGTGCACCAGCAGCACTTCAAACTTCACCCAAAAACGGATAAACCTTAAACCCAAAGATCCAAGCTAAAACCCCAGCCATATTTTCAATTGAGCAACCAATTCAAGAAGATGAACAGCAGCCTCCGGCTGTTTCCAACTTGTTCGTGTTCATACCGACTACCCACAAATCCGAAACCAACTTCGCTGTTTTTCATCAACAATCCTGCCCACTTTCTGCATTTGAAGCGAGCCAAGAGGAAGCAGCAATTAGCATTGTGTACCAGTTATGAAGTCGGTGGAGGTTATCCGGAGGAGGAGTTGGATATGCAAGATAGAAGACGACCCAGAAAAGAAGTGAAGCCGAAAATGGACACTTCCGAGTACGAAGCTCTCCTTAAAGGAGGCGACCAAGTCACATCGGTTCTTGAAGAGATGATTGTCCTCTTGGAAGATACGAACACTGATGAAACATCTGAAGAGATAGCTTTGCAGTTGGCTGCACAAGGTGTCATAGGTAAAAGGGTTGATGAGATGGAGTCAGGATTTATGATGGCCTTAGACTACATGATCCAGATTGCTGAAAATGACCAAGATGATAAGCGCAAGGCAATACTGGAGGTGGTGAAGGAGACAGTTCTATCTCATCTCACAAAAAAATGCCCGCCCCATGTTCAAGTGGTCGGCCTACTTTGTAGGACTCCATTGAAAGAAAGCAGACATGAACTACTTCGAAGAGTTGCTGCTGGGGGTGGTGTCTTTAAAAGTAAAAATGGCACCAAAGTTCATATCCCAGGAGCAAATCTTAACGACATTGCCAACCAAGCTGATGATTTAGTAGAGACAATGGAAACTCGGCCAATTGTACCTGATCGAAAACTGCTTGCAAGGCTTGTTCTGATTAGAGAAGAGGCTCGGAATATGATGGGAGGTGGACTTCTGGATGAAAGAAATGATCGTGGTCTAAGTACTCTTCCTGAATCAGAGGTGAACTTCTTGACCAAACTGGTTGCTTTGAAACCAGGGAATGTTGTCCAGGAGATGATACGAAATGTAATGTTAGGTAAAGATGAAGGGGCCGATAACTCAGGTGATGATGAGGAAGATGCTGCAGGTGGTCGGAGGGCTTCAAGGGGAATTTCAGGAAGGGAAAGTGTTTCGGGGCGGAAGCCACTTCCAGTTCGTCCAGGCATGTTTCTAGAAACTGTATCCAAGGTAAGATTCTTGCTTGTTTGTAGTCATTTAATGGATTCTGATGGATTGTTATGTGATCGTGACCTGATGATCTAAAGTTT

Coding sequence (CDS)

ATGAACAGCAGCCTCCGGCTGTTTCCAACTTGTTCGTGTTCATACCGACTACCCACAAATCCGAAACCAACTTCGCTGTTTTTCATCAACAATCCTGCCCACTTTCTGCATTTGAAGCGAGCCAAGAGGAAGCAGCAATTAGCATTGTGTACCAGTTATGAAGTCGGTGGAGGTTATCCGGAGGAGGAGTTGGATATGCAAGATAGAAGACGACCCAGAAAAGAAGTGAAGCCGAAAATGGACACTTCCGAGTACGAAGCTCTCCTTAAAGGAGGCGACCAAGTCACATCGGTTCTTGAAGAGATGATTGTCCTCTTGGAAGATACGAACACTGATGAAACATCTGAAGAGATAGCTTTGCAGTTGGCTGCACAAGGTGTCATAGGTAAAAGGGTTGATGAGATGGAGTCAGGATTTATGATGGCCTTAGACTACATGATCCAGATTGCTGAAAATGACCAAGATGATAAGCGCAAGGCAATACTGGAGGTGGTGAAGGAGACAGTTCTATCTCATCTCACAAAAAAATGCCCGCCCCATGTTCAAGTGGTCGGCCTACTTTGTAGGACTCCATTGAAAGAAAGCAGACATGAACTACTTCGAAGAGTTGCTGCTGGGGGTGGTGTCTTTAAAAGTAAAAATGGCACCAAAGTTCATATCCCAGGAGCAAATCTTAACGACATTGCCAACCAAGCTGATGATTTAGTAGAGACAATGGAAACTCGGCCAATTGTACCTGATCGAAAACTGCTTGCAAGGCTTGTTCTGATTAGAGAAGAGGCTCGGAATATGATGGGAGGTGGACTTCTGGATGAAAGAAATGATCGTGGTCTAAGTACTCTTCCTGAATCAGAGGTGAACTTCTTGACCAAACTGGTTGCTTTGAAACCAGGGAATGTTGTCCAGGAGATGATACGAAATGTAATGTTAGGTAAAGATGAAGGGGCCGATAACTCAGGTGATGATGAGGAAGATGCTGCAGGTGGTCGGAGGGCTTCAAGGGGAATTTCAGGAAGGGAAAGTGTTTCGGGGCGGAAGCCACTTCCAGTTCGTCCAGGCATGTTTCTAGAAACTGTATCCAAGGTAAGATTCTTGCTTGTTTGTAGTCATTTAATGGATTCTGATGGATTGTTATGTGATCGTGACCTGATGATCTAA

Protein sequence

MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYPEEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKVRFLLVCSHLMDSDGLLCDRDLMI

Homology

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BLAST of Lsi02G021630 vs. ExPASy Swiss-Prot
Match: Q1H5E9 (Protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRDA1 PE=1 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 6.4e-133
Identity = 243/322 (75.47%), Postives = 281/322 (87.27%), Query Frame = 0


Query: 42  KRKQQLALCTSYEVGGGYPEEEL-DMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE 101
           K K+ +  C  YEVGGGY +EEL +    ++ +  VK K+D +EYEALLKGG+QVTSVLE
Sbjct: 44  KLKRLVQFCAPYEVGGGYTDEELFERYGTQQNQTNVKDKLDPAEYEALLKGGEQVTSVLE 103

Query: 102 EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKA 161
           EMI LLED   +E SE +A++LAAQGVIGKRVDEMESGFMMALDYMIQ+A+ DQD+KRK+
Sbjct: 104 EMITLLEDMKMNEASENVAVELAAQGVIGKRVDEMESGFMMALDYMIQLADKDQDEKRKS 163

Query: 162 ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHI 221
           +LEVVKETVLSHLTKKCPPHVQV+GLLCRTP KESRHELLRRVAAGGG F+S+NGTK+HI
Sbjct: 164 LLEVVKETVLSHLTKKCPPHVQVIGLLCRTPKKESRHELLRRVAAGGGAFESENGTKLHI 223

Query: 222 PGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLST 281
           PGANLNDIANQADDL+ETMETRP +PDRKLLARLVLIREEARNMMGGG+LDERNDRG +T
Sbjct: 224 PGANLNDIANQADDLLETMETRPAIPDRKLLARLVLIREEARNMMGGGILDERNDRGFTT 283

Query: 282 LPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRE 341
           LPESEVNFL KLVALKPG  VQ+MI+NVM GKDEGADN   +++ +  GR+ S G++GR 
Sbjct: 284 LPESEVNFLAKLVALKPGKTVQQMIQNVMQGKDEGADNLSKEDDSSTEGRKPS-GLNGRG 343

Query: 342 SVSGRKPLPVRPGMFLETVSKV 363
           SV+GRKPLPVRPGMFLETV+KV
Sbjct: 344 SVTGRKPLPVRPGMFLETVTKV 364

[Close]

BLAST of Lsi02G021630 vs. ExPASy Swiss-Prot
Match: Q53K52 (Protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0425300 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 2.1e-107
Identity = 201/284 (70.77%), Postives = 237/284 (83.45%), Query Frame = 0


Query: 79  KMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESG 138
           K D +E +ALL+GG+QV SVL+EM+ L+ED   D + E +A++L AQGVIGKRVDEMESG
Sbjct: 66  KWDPAECDALLRGGEQVASVLQEMLKLMEDMEMDGSFESLAVELIAQGVIGKRVDEMESG 125

Query: 139 FMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHE 198
           F+MALDYMIQ+AE D D++RK++LEVVK+TVL HLTKKCPPHVQVVGLLC+T  K+SRHE
Sbjct: 126 FLMALDYMIQLAEKDSDNERKSLLEVVKQTVLDHLTKKCPPHVQVVGLLCQTEKKDSRHE 185

Query: 199 LLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIR 258
           LLRRVAAGGGVFK+  G K  IPGANLNDIANQADDL+E+ME+RP +PDRKLLARLV++R
Sbjct: 186 LLRRVAAGGGVFKNDKGLKCQIPGANLNDIANQADDLLESMESRPTIPDRKLLARLVIVR 245

Query: 259 EEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADN 318
           EEARNMMGGGLLDERNDRG +TLPE+EVNFL+KLVALKPG  ++ MI++VM GK EGADN
Sbjct: 246 EEARNMMGGGLLDERNDRGFTTLPEAEVNFLSKLVALKPGKALERMIKDVMQGKAEGADN 305

Query: 319 SGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVSKV 363
             +             GISGR SV+G KP PVRPGMFLETVSKV
Sbjct: 306 IENANAGPDSKLNHLTGISGRGSVTGLKPRPVRPGMFLETVSKV 349

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BLAST of Lsi02G021630 vs. ExPASy TrEMBL
Match: A0A0A0K6Y5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372300 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 5.6e-188
Identity = 339/362 (93.65%), Postives = 350/362 (96.69%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR  RKQ LA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPNRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIAL 120
           +EE DMQDRRRP KEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTN DETSEEIAL
Sbjct: 61  DEEFDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLK+SRHELLRRVAAGGGVFKSKNGTKVHIP ANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKDSRHELLRRVAAGGGVFKSKNGTKVHIPSANLNDIANQADDLIETME 240

Query: 241 TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV 300
           TRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGL+TLPESEVNFLTKLVALKPGNV
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGLNTLPESEVNFLTKLVALKPGNV 300

Query: 301 VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVS 360
           VQEMIRNVMLGKDEGADNSGD+EED AGGRRAS+GI GRESVSGRKPLPVRPGMFLETVS
Sbjct: 301 VQEMIRNVMLGKDEGADNSGDNEEDTAGGRRASKGIGGRESVSGRKPLPVRPGMFLETVS 360

Query: 361 KV 363
           KV
Sbjct: 361 KV 362

[Close]

BLAST of Lsi02G021630 vs. ExPASy TrEMBL
Match: A0A5D3D3S5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002360 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 7.3e-188
Identity = 341/362 (94.20%), Postives = 348/362 (96.13%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR KRKQ LA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPKRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIAL 120
           EEE DMQD RRP KEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTN DETSEEIAL
Sbjct: 61  EEEFDMQDTRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQ AE DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQTAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLIETME 240

Query: 241 TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV 300
           TRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGLSTLPESEVNFLTKLVALKPGNV 300

Query: 301 VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVS 360
           VQEMIRNVMLGKDEGADNSGD+EE  AGGRR SRGI GRESVSGRKPLPVRPGMFLETVS
Sbjct: 301 VQEMIRNVMLGKDEGADNSGDNEEGTAGGRRDSRGIGGRESVSGRKPLPVRPGMFLETVS 360

Query: 361 KV 363
           KV
Sbjct: 361 KV 362

[Close]

BLAST of Lsi02G021630 vs. ExPASy TrEMBL
Match: A0A1S3BHT4 (uncharacterized protein LOC103489722 OS=Cucumis melo OX=3656 GN=LOC103489722 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 7.3e-188
Identity = 341/362 (94.20%), Postives = 348/362 (96.13%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR KRKQ LA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPKRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIAL 120
           EEE DMQD RRP KEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTN DETSEEIAL
Sbjct: 61  EEEFDMQDTRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQ AE DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQTAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLIETME 240

Query: 241 TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV 300
           TRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGLSTLPESEVNFLTKLVALKPGNV 300

Query: 301 VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVS 360
           VQEMIRNVMLGKDEGADNSGD+EE  AGGRR SRGI GRESVSGRKPLPVRPGMFLETVS
Sbjct: 301 VQEMIRNVMLGKDEGADNSGDNEEGTAGGRRDSRGIGGRESVSGRKPLPVRPGMFLETVS 360

Query: 361 KV 363
           KV
Sbjct: 361 KV 362

[Close]

BLAST of Lsi02G021630 vs. ExPASy TrEMBL
Match: A0A6J1KT24 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497973 PE=4 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 1.9e-183
Identity = 336/379 (88.65%), Postives = 354/379 (93.40%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFPTC CS RLPT PKPTSL FI+NP+HF HLK AKRKQQLA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCPCSARLPTIPKPTSLVFIDNPSHFPHLKPAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIAL 120
           EE+LDMQDRRR RKE  PKMDTSEYEALLKGGDQVTSVLEEMI++LEDTNTDE SEEIAL
Sbjct: 61  EEQLDMQDRRRSRKEGNPKMDTSEYEALLKGGDQVTSVLEEMILILEDTNTDEASEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAERDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRVAAGGG FKSKNGTKVHIPGANLNDIANQADDLVETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGAFKSKNGTKVHIPGANLNDIANQADDLVETME 240

Query: 241 TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV 300
           TRP+VPDRKLLARLVLIREEARNMMGGG+LDERN+RGLSTLPESEVNFLTKLVALKPGNV
Sbjct: 241 TRPVVPDRKLLARLVLIREEARNMMGGGILDERNNRGLSTLPESEVNFLTKLVALKPGNV 300

Query: 301 VQEMIRNVMLGKDEGADNSGDDEEDA--AGGRRASRGISGRESVSGRKPLPVRPGMFLET 360
           V+EMI+NVMLGKDEGAD+ GDDEED   AGG+RASRGI+GRESVSGRKPLPVRPGMFLET
Sbjct: 301 VEEMIKNVMLGKDEGADDLGDDEEDTTRAGGQRASRGIAGRESVSGRKPLPVRPGMFLET 360

Query: 361 VSKVRFLLVCSHLMDSDGL 378
           VSK   L++ S   ++ G+
Sbjct: 361 VSKTTTLIIISSFTNTRGI 379

[Close]

BLAST of Lsi02G021630 vs. ExPASy TrEMBL
Match: A0A6J1H6Q1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460697 PE=4 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 7.0e-183
Identity = 335/379 (88.39%), Postives = 353/379 (93.14%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFPTC CS RLPT PKP+SL FI+NP+HF HLK AKRKQQLA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCPCSARLPTIPKPSSLVFIDNPSHFPHLKPAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIAL 120
           EE+LDMQDRRR RKE  PKMDTSEYEALLKGGDQVTSVLEEMI++LEDTNTDE SEEIAL
Sbjct: 61  EEQLDMQDRRRSRKEGNPKMDTSEYEALLKGGDQVTSVLEEMILILEDTNTDEASEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAERDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRVAAGGG F SKNGTKVHIPGANLNDIANQADDLVETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGAFTSKNGTKVHIPGANLNDIANQADDLVETME 240

Query: 241 TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV 300
           TRP+VPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Sbjct: 241 TRPVVPDRKLLARLVLIREEARNMMGGGILDERNDRGLSTLPESEVNFLTKLVALKPGNV 300

Query: 301 VQEMIRNVMLGKDEGADNSGDDEEDA--AGGRRASRGISGRESVSGRKPLPVRPGMFLET 360
           V+EMI+NVMLGKDEGAD+ GDDEED   AGG+RASRGI+GRESVSGRKPLPVRPGMFLET
Sbjct: 301 VEEMIKNVMLGKDEGADDLGDDEEDTTRAGGQRASRGIAGRESVSGRKPLPVRPGMFLET 360

Query: 361 VSKVRFLLVCSHLMDSDGL 378
           VSK   L++ S   ++ G+
Sbjct: 361 VSKTTTLIIISSFTNTRGI 379

[Close]

BLAST of Lsi02G021630 vs. NCBI nr
Match: XP_038898241.1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X3 [Benincasa hispida])

HSP 1 Score: 678.7 bits (1750), Expect = 2.9e-191
Identity = 348/362 (96.13%), Postives = 354/362 (97.79%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFPTCSCS RLPTNPKPTSLFFINNP HFLHLKRAKRKQQLA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCSCSNRLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIAL 120
           EEELDMQDRRRP KEVKPKMD+SEYEALLKGGDQVTSVLEEMIVLLEDTN DETSEEIAL
Sbjct: 61  EEELDMQDRRRPIKEVKPKMDSSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLIETME 240

Query: 241 TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV 300
           TRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGLSTLPESEVNFLTKLVALKPGNV 300

Query: 301 VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVS 360
           VQEMIRNVMLGKDEGADNSGDD+ED AGGRRASRGI+GR SVSG+KPLPVRPGMFLETVS
Sbjct: 301 VQEMIRNVMLGKDEGADNSGDDKEDTAGGRRASRGIAGRGSVSGQKPLPVRPGMFLETVS 360

Query: 361 KV 363
           KV
Sbjct: 361 KV 362

[Close]

BLAST of Lsi02G021630 vs. NCBI nr
Match: XP_038898240.1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 348/382 (91.10%), Postives = 354/382 (92.67%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFPTCSCS RLPTNPKPTSLFFINNP HFLHLKRAKRKQQLA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCSCSNRLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVL--------------- 120
           EEELDMQDRRRP KEVKPKMD+SEYEALLKGGDQVTSVLEEMIVL               
Sbjct: 61  EEELDMQDRRRPIKEVKPKMDSSEYEALLKGGDQVTSVLEEMIVLTHDVHIQRCSCHDCQ 120

Query: 121 -----LEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKA 180
                LEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKA
Sbjct: 121 FHGEKLEDTNIDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKA 180

Query: 181 ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHI 240
           ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHI
Sbjct: 181 ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHI 240

Query: 241 PGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLST 300
           PGANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLST
Sbjct: 241 PGANLNDIANQADDLIETMETRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGLST 300

Query: 301 LPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRE 360
           LPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDD+ED AGGRRASRGI+GR 
Sbjct: 301 LPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDKEDTAGGRRASRGIAGRG 360

Query: 361 SVSGRKPLPVRPGMFLETVSKV 363
           SVSG+KPLPVRPGMFLETVSKV
Sbjct: 361 SVSGQKPLPVRPGMFLETVSKV 382

[Close]

BLAST of Lsi02G021630 vs. NCBI nr
Match: XP_004150361.1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic [Cucumis sativus] >KGN44684.1 hypothetical protein Csa_016754 [Cucumis sativus])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 339/362 (93.65%), Postives = 350/362 (96.69%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR  RKQ LA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPNRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIAL 120
           +EE DMQDRRRP KEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTN DETSEEIAL
Sbjct: 61  DEEFDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLK+SRHELLRRVAAGGGVFKSKNGTKVHIP ANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKDSRHELLRRVAAGGGVFKSKNGTKVHIPSANLNDIANQADDLIETME 240

Query: 241 TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV 300
           TRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGL+TLPESEVNFLTKLVALKPGNV
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGLNTLPESEVNFLTKLVALKPGNV 300

Query: 301 VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVS 360
           VQEMIRNVMLGKDEGADNSGD+EED AGGRRAS+GI GRESVSGRKPLPVRPGMFLETVS
Sbjct: 301 VQEMIRNVMLGKDEGADNSGDNEEDTAGGRRASKGIGGRESVSGRKPLPVRPGMFLETVS 360

Query: 361 KV 363
           KV
Sbjct: 361 KV 362

[Close]

BLAST of Lsi02G021630 vs. NCBI nr
Match: XP_038898239.1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 666.4 bits (1718), Expect = 1.5e-187
Identity = 348/383 (90.86%), Postives = 354/383 (92.43%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFPTCSCS RLPTNPKPTSLFFINNP HFLHLKRAKRKQQLA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCSCSNRLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVL--------------- 120
           EEELDMQDRRRP KEVKPKMD+SEYEALLKGGDQVTSVLEEMIVL               
Sbjct: 61  EEELDMQDRRRPIKEVKPKMDSSEYEALLKGGDQVTSVLEEMIVLQTHDVHIQRCSCHDC 120

Query: 121 ------LEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRK 180
                 LEDTN DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAE DQDDKRK
Sbjct: 121 QFHGEKLEDTNIDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRK 180

Query: 181 AILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVH 240
           AILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVH
Sbjct: 181 AILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVH 240

Query: 241 IPGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLS 300
           IPGANLNDIANQADDL+ETMETRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLS
Sbjct: 241 IPGANLNDIANQADDLIETMETRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGLS 300

Query: 301 TLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGR 360
           TLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDD+ED AGGRRASRGI+GR
Sbjct: 301 TLPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDKEDTAGGRRASRGIAGR 360

Query: 361 ESVSGRKPLPVRPGMFLETVSKV 363
            SVSG+KPLPVRPGMFLETVSKV
Sbjct: 361 GSVSGQKPLPVRPGMFLETVSKV 383

[Close]

BLAST of Lsi02G021630 vs. NCBI nr
Match: XP_008447229.1 (PREDICTED: uncharacterized protein LOC103489722 [Cucumis melo] >KAA0042003.1 uncharacterized protein E6C27_scaffold67G004450 [Cucumis melo var. makuwa] >TYK17939.1 uncharacterized protein E5676_scaffold306G002360 [Cucumis melo var. makuwa])

HSP 1 Score: 666.4 bits (1718), Expect = 1.5e-187
Identity = 341/362 (94.20%), Postives = 348/362 (96.13%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYRLPTNPKPTSLFFINNPAHFLHLKRAKRKQQLALCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY+LPTNPKPT+L+FINNP HFLHLKR KRKQ LA CTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPKRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNTDETSEEIAL 120
           EEE DMQD RRP KEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTN DETSEEIAL
Sbjct: 61  EEEFDMQDTRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQ AE DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQTAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLIETME 240

Query: 241 TRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLSTLPESEVNFLTKLVALKPGNV 300
           TRPIVPDRKLLARLVLIREEARNMMGGG+LDERNDRGLSTLPESEVNFLTKLVALKPGNV
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGLSTLPESEVNFLTKLVALKPGNV 300

Query: 301 VQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRESVSGRKPLPVRPGMFLETVS 360
           VQEMIRNVMLGKDEGADNSGD+EE  AGGRR SRGI GRESVSGRKPLPVRPGMFLETVS
Sbjct: 301 VQEMIRNVMLGKDEGADNSGDNEEGTAGGRRDSRGIGGRESVSGRKPLPVRPGMFLETVS 360

Query: 361 KV 363
           KV
Sbjct: 361 KV 362

[Close]

BLAST of Lsi02G021630 vs. TAIR 10
Match: AT5G48470.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 475.3 bits (1222), Expect = 4.6e-134
Identity = 243/322 (75.47%), Postives = 281/322 (87.27%), Query Frame = 0


Query: 42  KRKQQLALCTSYEVGGGYPEEEL-DMQDRRRPRKEVKPKMDTSEYEALLKGGDQVTSVLE 101
           K K+ +  C  YEVGGGY +EEL +    ++ +  VK K+D +EYEALLKGG+QVTSVLE
Sbjct: 44  KLKRLVQFCAPYEVGGGYTDEELFERYGTQQNQTNVKDKLDPAEYEALLKGGEQVTSVLE 103

Query: 102 EMIVLLEDTNTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAENDQDDKRKA 161
           EMI LLED   +E SE +A++LAAQGVIGKRVDEMESGFMMALDYMIQ+A+ DQD+KRK+
Sbjct: 104 EMITLLEDMKMNEASENVAVELAAQGVIGKRVDEMESGFMMALDYMIQLADKDQDEKRKS 163

Query: 162 ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHI 221
           +LEVVKETVLSHLTKKCPPHVQV+GLLCRTP KESRHELLRRVAAGGG F+S+NGTK+HI
Sbjct: 164 LLEVVKETVLSHLTKKCPPHVQVIGLLCRTPKKESRHELLRRVAAGGGAFESENGTKLHI 223

Query: 222 PGANLNDIANQADDLVETMETRPIVPDRKLLARLVLIREEARNMMGGGLLDERNDRGLST 281
           PGANLNDIANQADDL+ETMETRP +PDRKLLARLVLIREEARNMMGGG+LDERNDRG +T
Sbjct: 224 PGANLNDIANQADDLLETMETRPAIPDRKLLARLVLIREEARNMMGGGILDERNDRGFTT 283

Query: 282 LPESEVNFLTKLVALKPGNVVQEMIRNVMLGKDEGADNSGDDEEDAAGGRRASRGISGRE 341
           LPESEVNFL KLVALKPG  VQ+MI+NVM GKDEGADN   +++ +  GR+ S G++GR 
Sbjct: 284 LPESEVNFLAKLVALKPGKTVQQMIQNVMQGKDEGADNLSKEDDSSTEGRKPS-GLNGRG 343

Query: 342 SVSGRKPLPVRPGMFLETVSKV 363
           SV+GRKPLPVRPGMFLETV+KV
Sbjct: 344 SVTGRKPLPVRPGMFLETVTKV 364

The following BLAST results are available for this feature:

BLAST of Lsi02G021630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1H5E9	6.4e-133	75.47	Protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic OS=Arabidopsis thalian...	[more]
Q53K52	2.1e-107	70.77	Protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic OS=Oryza sativ...	[more]

BLAST of Lsi02G021630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6Y5	5.6e-188	93.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372300 PE=4 SV=1	[more]
A0A5D3D3S5	7.3e-188	94.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BHT4	7.3e-188	94.20	uncharacterized protein LOC103489722 OS=Cucumis melo OX=3656 GN=LOC103489722 PE=...	[more]
A0A6J1KT24	1.9e-183	88.65	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 OS=Cucurbit...	[more]
A0A6J1H6Q1	7.0e-183	88.39	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 OS=Cucurbit...	[more]

BLAST of Lsi02G021630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898241.1	2.9e-191	96.13	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X3 [Benincasa ...	[more]
XP_038898240.1	1.1e-187	91.10	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 [Benincasa ...	[more]
XP_004150361.1	1.1e-187	93.65	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic [Cucumis sativus] >KGN...	[more]
XP_038898239.1	1.5e-187	90.86	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X1 [Benincasa ...	[more]
XP_008447229.1	1.5e-187	94.20	PREDICTED: uncharacterized protein LOC103489722 [Cucumis melo] >KAA0042003.1 unc...	[more]

BLAST of Lsi02G021630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48470.1	4.6e-134	75.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..81
IPR038961	Protein PEP-related development arrested 1	PANTHER	PTHR37262	PROTEIN PEP-RELATED DEVELOPMENT ARRESTED 1, CHLOROPLASTIC	coord: 35..363

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G021630.1	Lsi02G021630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0042644	chloroplast nucleoid