Lsi02G021560 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G021560
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Abasic site processing protein HMCES
Location	chr02: 27979780 .. 27990876 (-)
RNA-Seq Expression	Lsi02G021560
Synteny	Lsi02G021560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCTCTTCATCTCTCCACGTCCAGAACTTTCCGTCCAGGTTCATCACCTCCTCCAAGGCAAGGCACCCGCCATAGCCATCCAACAGTCAAGCTTCTGAACTCTACCTTTCATTTCCAGTAGAATACCATAGAGAGTGTAGCAAACCATAGAAGAGGCGGATGTGTGGAAGAGCCCGTTGTACTCTTCGAGCTGATGACATCACCAGGGCCTGCCACCGCACCGGCGGCCGTGTCCGCACCCTCAACATGGACCGGTAATATCATTCACTTCTTTCTTATTTCGTTCTGCTGCACTGTATTTGAGTGTTCTGTCTCTATTCCATGTCTAGTTCCAGTTGGAAGGTTCTGAACTTACCGGGTTTGATGCTTTATTTATTTATTATTATTTGTATTTAGTTTTCATCCGCTGTTCAATGCCTCCCCGGGCTCGGATTTGCCGGTTGTTCGTCGAGACGATGAATCTGGTGGCGGAGGGGTCGTCCTCCAGTGCATGAAATGGGGGCTGATTCCTAGTTTTACTGAAAAATTCGAGAAACCTAATTACTTCAAGATGGTGATTTTTCCTCTGTTGTCTTTTGGCCTTTTATCTGGTTGTTGTGTAGAGTCTTATTTTGAAATGACAGTTACTATTTTCGTTACCATCAGTAAGCATTTGTAGGCTGTTGTGATTTTCGACTGAAAAATGGATACTATTGTCCAGAATTTTAACGACCTTACTTGAACAAGATCTATTTTATAGGTTTTGCAACCGTATCCTTGAGTTCTAAAATATCGTTCAAAACCTTATTTACTCTGTGTGTATATTAATTTTTAGGTAAGCAATTATTTATTTAATATACAAAATTCACAAGAGAAAGGATTAGAAAGGGTCAATAGAGTTTATGGATTAGAAAGGGACAATAGAGTTTACATACATTGCCAGATTGCCCTGTCTTGATGTGTTTTGTTACAATTCTATTTACTCTTGCAATTCCTAATTACACGTTGCTTTGTAGATTTGATGTAGTTGATTTAGTAGCAATTTTGTAGTTTTGTCTTCGTTTAAGTAATTCTTGTCTCTTGCTTTAGAAAATAGTAGTTAATCAATAGTCTTGGCTTTTTGCACAAAACAGGGGAGCCTTTTTGTAACAAAAGTATCAAAAGGCTTCCCTGTGTTGTGGAAAATTCTTTTGGCCAATTGGAAACCCTTGTAATAATTTGGCTTGAGGTCTCTTTCCCCTTTTGTTATTTTATTCATCAATAAAATTTTTGTTTATTTTTTTGAAAAAATAAACAGTCTCGTTCTTTGCAGTCGTTGTAGCTTTGTGATGTCTGTATTACTATCCTTGTCACTAGAGAATATCCCTGTGCACTATCATTGTTAGAATCTTGTTTGATCCATGTAACAAGTTGCTTGTTATTCTATATTAAGTGGAGGCCCTTCCTAACATCTTGATATTATAGACTGGAGACCTATTTCTTCAAAATTCAGATTTTTATTTTTTATTTTTTATATTTTTTTAATCTCTGAAGAACTTCAGATTTAAGTTAGGGTTTTGAAATTCTATTGATTAAATATGAGATGAGTTTAAAGCGGCATTGGATTTAGGAGCTAACAATGCCCTTGGGCCAGATGAATTTATGGGTAATTTGTGAAAAAAGCTTGAAATCATCAAAGGGGATATCTTAAAGGGCACTTTAAGAACTTTTCGAAAATAACAGACTTAACTCTTATGTACATGAGATCGACCTTCACTTGATTGTAAAGAAAAGTAGAGCTCCAAAGGAGTTTGACTATCAACTCATTAGCCTGCGCCTCTATAAATGGTAGCCAAGGTGAAGGTCCATGCCAAAAGATTGAAAAGAGTGCTTCCCGATGCCATAGCTCAGAATCATTCAACGTTCATATATGATAGACAAATTTTAGACTCTATTTTGTGTGATCACAAGTTGGTGGATGAGTATTAAACCAAGAAGTTAAAAGGTAGGGACATAAAATGAACTAGGATATTCTCCTTGAAGTGCTTTGTAGAAAAGGGTTAGTTTGGTATTAGTGTATTGTTTGGATTCAAGGGTTTCAAAAAGTTTGCGCCCACCCCAAGGCCCATACTTTGGAAACAACAAGATTTTTCTTTATTAAGCTCACTTGGAGATCTGAATATGTAACCTTTGGGTAGTTGTTACTTAGAGATCATGGGCCCTAGCAATAGGGCCACACCCGATGCGCTAATCTGAGGGTGTATCTATCTTAAAGACCTCCTTTTGATATTTCTGAAAGTCAAGCCAAGATCAAAGTCTCAAGAAGTTTAAGGTAAGGTTATCCCATTACTCCTTTTGTTTTTAACTTTCTTGACAAATGGATTAGTGAAGATTGCCTCCAAGGCTTCATGCTGAGCAGACCATATTCACATAAATTTGATAGGTCTTAACCTTCAATTTATTTATCAACAGAACCAAGGGAGTTTTGAGAGCTCCCTTCCTTTCCTATTCTCAAAGAGAACTATTACAATGATCAAAATTATACCCTTCCCAATTCTTAGCTTCCCTATATATTTCTCACTAAGGCCCTCTTCACTCCTAACAAACAATATTCCCTAGGCCTACATACAAATAACTAACAAATTCCTCACACACGCTTACCTCCTCCCTTCACACGCTTTCTTACATACACCTTAGTAATATTGGGTCTATCAAAATCACCTTTAGTTCATTGATGTCATGCTTCATTTTTCCATTGATGAGTCAACAAGCTCAACAACTTTTATGAAGTGGACAAGTTGTTTGAGATATGCTCGGGCCTCAAAATAAAATTTGCTAAGACCTTTATTGTTGCCTTACCAAGGCTCTTTAGGGTTGCCAAATCCAAATGCTTCTTGATCTAGTAGTGCTGGTTGGAAGTTTTGAATGGGTGGACCTTAACTCAAGTTCAGAAGAAATCTTCTTGATCTTGAAGTGGAGGAATGGGCCTCCCTAGCAAGCCTCCTTGCCCAATTGTGCTCCTAGAAATAAGTAAGATGCTAAAATTTAGACTCTCAAAGCAAGAGGTGCCTTTATTGTTAGATTGTTCGTGCCAAATCTTTCTGTTAAGAATGATTTCCTCAGCCACTCCTTTGTGGCTTAGTATTCCAAAGTGCCCAAAAAGTGAAAGGATTTGTTGTGGTTCTTTGCTCTTGGAAGGCCAAATATGTGTTGCAAAATCGGAAAAATAATGTCTAATTCCATCTATTTCCAACTTGTCGTGTGATGTGCAGTAAGGATGCAGAGGATCACACGTGTTTTTTTTTTCATCTGCCCATTTGTAGCTTTGTGTCAACTGCCAACACAATCTCTTTGTTATGGCTCTTCTTTGGAGGTTGTGGTCTGAGAGGAAGAAAAAGGTGTTTCATAGGAGTTCCTTTGCCTTGAATTGTTTTGTGATATTGTTATAAATTTCATTTCTTCTTGGTGCATTCTCTCTAATACTTTTTGTAATTATGATCTGTTGCAAATCTTTTTCAACTGGAGTACTTTTTGTCATCTCATGGCATGGTAGGGATATCTCTATCTTCCCTTTTTATCTAGCTCTTGTTCTTTTGTGAATACAAGTTTTGTTTTCATAAAAAGAAAAACCCTATATAAGTGCTTTAAAAAAACTTTTGAGATGCATTTATGCTCAACCATTGTGAAAAGTAATCTCTGTTTAAGGTAAGTGTTTACAACCTAGGACAGAATTCCTTGTAAGGTTTGCGAAATTAACTTTCCCTATCGACATTTTCAAAGCAGGGGCAACAAAAAGAATATTTGACTTTGAAGGCTATTGAAAGGCCTTCAATGTGATATCCTTGTATTGTTGTTTCAACACCATTGGAATATTTAGAGTCTTTTAAAATTCTAATCCAATTGGTTGAGGCAATCAATGTGAGAGAAATAGGAGGGTTTTTAAGATGGGTAGAGAGTTTTTGGTGAGGTTCGATCAGGATCCTCGTCCATCCTCTTAGAGAGAATGCAACTTATCTTCCATTTTTTAAGCCATTTCCTCCATACTAATAAGGCAATAAAACATAACAAATAAAACATCCTATATAAATATGATCCACAAATCTAATAATAATATCTTAAGAATATAAAATATGCCCCCCCACCCCCCACCCCTCACCCCACCACACACACACATACACACACAAATAAAAATAAAAGAGCCAATATGGAAATGAGCTGTTGGCGGTGGCGACTAGGGTAAGCAAGGGCTGCACTCATGAAAGGTATAAGTGTGATGATAGGCACAAGCATGAAATGCGGGTGAGACTTGATAGTGCATGCACACAGACTATGGTTGGGCCTTCAGAATGGGCTTGTGAGTGTGCGCATAGGTGATGGCATGCGATGGGTGTGTTTTGGGCTTCTTCAAGGTTTGCACAGATTTGAGTGGTGGTAGTAGTAGTTGGGCAGGCAAGAGTGTGTGTAGATGTGTGCTTAGAGGAACTAGCTGGTGCAGGTTGGGGCAAAGGACCAACACGTGTTTTAGGTATGTGTGCACTAATGGGGCATAGGCACATGTGGGTGAGGCTTGTGGTGTGAGCATGGAGGCTATGGTTGTGTTGTGGGCATGCACTTGTGGGTGTGCATATAGGTGATGGATGCAACATGTTTGCTTCATTCTCCTTTGAGGTTTGCATGGATTTGAGAGGTGGCATGATCACATAATGTCTGTATCGGTGCTCTCATTTCTTCATTTCAACGTTCCCTAACCATTGCCTCCATTTCTCTTCATCCATTGCCTTCTCCCCTTTCTGCCATCTTTGATTGTTCTAAGTTTTTTTTTGCACCTTTGCACCTTATGATTTCATGCTTTGCCTTCTGGCTACACCACAAGGAAGTTTTGGAACTGGAAGATAGAGAATTTAATTATTTGATACTTAATGATTTTGGTAAGATACTCTAATTGAGGAGGGTATATGGTTGTAGTATTATTTTGTCTTTAGTTTGTGTCTAAGGACATGCACCTTAGTTTGGCTAGCGTGTCAGTGTCTGACATGTGTAGGGCACTTGGACATTCTAACACTTATTGAATATGTATTTGACACTTGTTAGTTAGCACGATAGACATGTGTTAGACACTAGTTGTACAAAGTCAATATAGATTCGACATGTTAGACACTAGTTGTACAAAGTCAATATAGATTCAACATTTGTTAGGCACGTATTGAACTCTTGGTAAGTATGCTAAATAGATACATAGTAAATATAAGACAAAAAAAGTTTGAAATCAAAATACATCAAATTCATTTTTTAAGGAAATGCATAAACTTGTTGACTTTGAATTTCCTTATATGAAAATGACATATATTTTAATAAACGTGTCCTTGTTTTGTCTGAATCTTAGATTTTTAAAAATTAACGTGTCATTGTGTCCGTATTGTGTTGCATCTGTGTCTCACATCCTATGCATGCTTCTTAGGTTTGCATTAGGAATTTGTATTATTTAAGATGAATGCTTTATGATAAATAAACTGTGTACACTAGCCAATCTATGTTTGCCTTATTATCTAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTATGTTTTTGGAGAACCTCGAACTTTTATATTTATATGAATGTGTGTTTGTGTTCATCATCTGTCTTTACTCTTGCACAAACACCCTTATATCCTTGGTTCTATGGTAGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGTATGTTTCTTTATGATCAAGCAAAAGATGACTTTTCTTTCTTTTCTTCTTTTTTAGGGATCTTGCCCTAATACTTTGCTTTCACCGTATCAATTTTTTTTTACTTCCTCCATCAAAAAGATAAGTTTTTTTATTTTATTTTCTTGTACTAGTTTCAGTCGATGTACCGGTTTTTTTGAACTTCTGGACTGGATACTAATTTATTGAAGTTCTATTCAATATTTGGTAATTTAGATATCTGATATTATTGACCAGATATTCAATGTACATCCTAGGAAGACCTATAATGTTCTTGATTTATTATTGTTTTTGCAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGGTCAGTCCTATCTTTTCTTATGGCTGTTTTAGATCACGTTTACAATTGGATTTGAACATTGTTAGGGATGTGATGGGACTTCTTGTCAATCTCTGATGTGGTTGCAATAATTTCTATTTTCTAATTGAAAAGATCATAGTATTAATGCCAAATTGTACAAGAGTGAAATTAACCTGAGTCGTGGTTTGAGGATTATAAGGAATTCCTGCTAGCCTTGATTAAAAAAAAAAAACAGAAGAGTGTTAGGACGTAGGTGATAGATTTAAGTATCCTTGAGAAGCAATCATTAGAAGTACATCTATTTCTAGACTTCCAAACATCCCATAATATAGTAGCCATTTTATTTCTCTGCAACTTGTCACATCATATGAAAGGAAGAAGAATCGGACAAAGGAAATACTAAGAGCCGCCTACTTGAAGTTACTGTTAAAGGATATACCAAAACTCTCCCAAAATTTTTGGGTAAAGGGGCAATATATGAATAAATATTCGGGAAATATATGAATAAATATACTATGTTCTCTCCTTTTTGAAAATAACACACATATAGGCTAAGCCACGCTTCTGTGGAGCACATAATTTGTTTAGGTAAGAAACGGTTGTCCATTAGTATTAAAAGAAGTGAATACGATATCCACCCAATCAAGCCACCAGGCCTTATAAAAATTATTCCCGATTGGCATTAATTGATAAAATAATAAACTTTAGATGAGGGAGAATTTGATTGTTTAGTGGCTGATGGGTGATCTGTTTAGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTAAGAACTTTTTGAAAGGAAAAAAGTGACTTATGTTAATAATTCATTAATGTTTAAAATGTAAATGTTAGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGGTATCTCATCTTGCCCGTTCTTTTTTACTTGGTCGATAGCTTTCCCATCCTGGTTGAAGTTTAAAAGTTATAGCATGTTGCTGGAGAAAATTTGAGTTACATTATTCTCATAGATTATGTGATGATTTAGTTTCTTCAGGACCAATTTATCTGAGGTCATATTTGTTTATTCACGTTTCTCGCCTCCAGTGGAACACTTCACAGCTAGTTTGTTTGTTTGTTTGTTATTTTAAATTTTATTTTGTTTTCTGGTTTATCATGATTGAGGAACGTACATATTATGTATATAGATATGTACTGCCGTGGTGATTGAAGTAGTGGATATAATACATAGATCAAAGTTCATTTTAATGCCTTTGTTCGGGCTTTTGCAAGAAATTATTTCTGCAATGATGTGATTTCTTCTTGTTCTTGATATTAGATAAAATGTTTGTGCGCCAAAGTGACGATTGAGTTTGTTGATAGGGAATGTTCCTGCTCTGATGTGAATATGACGAATGTTGTTTAGTTGATAGGATACATGAAATGGAGTCGTTTGAGAGACAATCTTTGGGCTAAAGACAAAATGTTCTACGGAATGTTCAAATAGCATTATGTTGTTTTCAATTCTGTTTTGGAATAAGATGAAAATGATTGGAATTTATATTTTATTTGTATACTAATTTGTTTGTTTAGACTTGCACGTGTCTTCTTCTTCTGGTGTAGTGACACTTGTAATTTGCTTAATCAATAATGAAAATAACTAGGATTTATGTTCACGTTGAATTCTTGAGTGTAGGCTTACACATTCACCATGGTGATGTGGGATGGGTATTAGAACTTTGACCTTAAGGAAGGTTATAATATCCTTTGTCATTGTGAGACCAGAGAATCATACTCATACTCTACATTAGAGTTCAATATATATAGGCATAAAGTCAAGCTAATAAGCTTCTAAATTTACACATGCTATAACATTTTTAGCTACTGAGCTATGCTGAAATTGGTCACTGTCATTTGTTAGGAAAAAACTGACGATTTTTTTTATGGGCTTTCATATTTTGGTTAAATGAACACAAAACTCTCTCAAACATCTGTTTTTTTATCTTTTAGGAAATTTGATTAGTAACTTCATTTTCTAAAATATTTGAAAACATGTATTTTGTAGAAGTTATAACGATTTTAGTGTTCTTTAAAAATGATTGCGAATGTAGCATTAATCAATATGCTTTTATTTCACATGATAGTCATAGTCCTCGTTGATTTACATTAACGATTAACCTAATATAGATCAACAAGTAACATTGTTATGTCTTCTTCTGTAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACAGTAAGGTAGGCAGCAATCCAAAGATAAGGAAGAAGGGAAGCCTAAAGAGTGGCAAGGACAACCAATCAACCCTCCTTTCATACTTTGGGAGGAAATAGATAGGCCTTACCTTGTTTTGAAACAAATATTATCCAGACACGTAAATCAATTACTTGTGCTCCACGTCTCATGTTTATATGTATGTCATTTAGTTTGTTTATCTTGCTGTGTTAAATGCTGCTGACTGCTGAGGTACATGGAAGTTTTTTTTTTTTTTTTTTTGTTTGAACATTTTGATTGTGTTAAATGCAGAGTATTTTTGTTGTATAAAGGCAGTCTTCTGTAGCTTTGAAAGGACAGTTTGATTATGGCTGATCCTTCAGCTGTACATTAAACTGAACTCTTTGAGATACGTTCGTAACAATTTTCCTCTTGCAAAAAAAGCATTATGTTTTGGTTCATTTGTTACTGGTTTTGCATACTTTTATGTAGGGAAATTACCTTTTTAGTCTATATATGGTTGGTGGTTGGTTTCAATTTCTTTCCGTAGCTTAAAAGTTCCAATCTCATCAATGTAGTTATTATCGTTATTAGATACATAGTTATTGTCAATATAGTAGAACGTTAATTAAAAGGTTAAAATGCCATGATGTGATTGTAATTTGAGATTCTTTTTATTTTAGTTTGTGCTTTTTAAAAGCGAGCATCAAGCATTGAAAAATTGACTTGATTGACTCGAACCGTCCGAATTGAAGATGGTTGGTTGGGGTCGGTTTTGCTCATAGCAAAATTGACCCATCGGTTCGGTTAGTGAACCTAATGAGATCTCAAACCAGCTGAATTGACCAACTGTAAAAAAAATTGCAAAAAAGGAAAAAGAAAAAAAACCCGTGTAAAAAATTGCAACTCCCTTGGAAGACCATATCATCATCATTATTATTATTATTATATATTTTTAGGTAATTACAATAGGTAACACTTTCAGAATAATATTTAAGTGTAGGCAACATTTTTTAAGCATTGCAAATAAAGAAAAATATATCAATTAGTAAAAGACTATCACTGATAGAGTACTCCTACCAGCGATATAGTCTATCACTAATAGACTCTAAATTTTGCTATATTTGTAAATTCTTTTGCATTGTGCTATATCTACTAATACTTTGAGTCTGATTGTTATATTTGTAATTGCTCCCCTTCTCCTTCCTTTCCTTTTCTATTTTCTCAAATCTTCGTTTCCCCTTCTTAATTTCTTTCTATTATTCTCCATTTCTCCCTTCCTTTCTTTTCTTCTCCCTTCAGTAATTTTTTTTCCCATTCAAATTGCTTGGCACAAAATCACATTGTTTAGTTAAATCCAATAATTAGTTGATTATCATTGTAAAATTGGAAAATAAATCTAAAATTTAACTCCTAACAAATCCTACTATTACTCCAACTCCTTTCCATGTTATTTTTCTAACTAATTCTTTTTTAATATTTACTTAGAAATTTGTTCTAATATCTCAAAAAACATATGTTTTTTTTGGGAAATTATTATAAACAGAAAAATATCAAACTATTTACAAATATAGAAAAATTTCATTCTATTAGTGATAGACCGCGATAGAATTCTATCGCTTTCTATCGCTCAAGCAAATAAATTCTATCGCCTGAGCGATAGAAAGCGATAGAATTCTATCGCGATCTATCAGTGATAGACTGTAAAATTTTTTTATATTTGTAAATAGTTTGACTTATTTTTCTATATTTGAAAAGAGCCTTCTTTTTTTTTCTTCAAAATATAGGCTACAAATAAAGAAAATTACATTTTTTTCAAACATACATTTTTATACTATTAAACTCAGTAAATCCATACTGAAAATCATTGTGATTTCACTTCAGTTCACAGAACAAGAAATTGTACAAAGTATACATACAAATGAAAGAGAGAGACAATAAGATCATCACCCAAATGAAAAAAAAAAAAGCTTCATTCATTAAAGAATTAAGCATATTCATCAACTAAGAGGAAACAAAGTTGGACGTAAAAATGGCAAAAGTGAGTAATAAGCTTCTATCAACTTCTCATTTGGAGCCAACTCCATAATCAACCTCTTCAGCATCCGAAATGGCCCGACCACGACCCGAGACCCAAGACAAAACCCTCGCCGCCTATTCCCGAGTCGTATCGTGCTGCTCCGTCGACGTCGTGACCGTCGTCGTGGGCGACACCATCCGACTAACCCACCCGAGTTCGAGCACATGGATATGGCCATGGCTTCTCTCTTCAACATACCCTAAGAGTTTGTACGGAATCTTGATCTAG

mRNA sequence

CGCCTCTTCATCTCTCCACGTCCAGAACTTTCCGTCCAGGTTCATCACCTCCTCCAAGGCAAGGCACCCGCCATAGCCATCCAACAGTCAAGCTTCTGAACTCTACCTTTCATTTCCAGTAGAATACCATAGAGAGTGTAGCAAACCATAGAAGAGGCGGATGTGTGGAAGAGCCCGTTGTACTCTTCGAGCTGATGACATCACCAGGGCCTGCCACCGCACCGGCGGCCGTGTCCGCACCCTCAACATGGACCGTTTTCATCCGCTGTTCAATGCCTCCCCGGGCTCGGATTTGCCGGTTGTTCGTCGAGACGATGAATCTGGTGGCGGAGGGGTCGTCCTCCAGTGCATGAAATGGGGGCTGATTCCTAGTTTTACTGAAAAATTCGAGAAACCTAATTACTTCAAGATGGTGATGGCATGCGATGGGTGTGTTTTGGGCTTCTTCAAGGTTTGCACAGATTTGAGTGGTGGTAGTAGTAGTTGGGCAGGCAAGAGTGTGTGTAGATGTGTGCTTAGAGGAACTAGCTGGTGCAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACACATCCGAAATGGCCCGACCACGACCCGAGACCCAAGACAAAACCCTCGCCGCCTATTCCCGAGTCGTATCGTGCTGCTCCGTCGACGTCGTGACCGTCGTCGTGGGCGACACCATCCGACTAACCCACCCGAGTTCGAGCACATGGATATGGCCATGGCTTCTCTCTTCAACATACCCTAAGAGTTTGTACGGAATCTTGATCTAG

Coding sequence (CDS)

ATGTGTGGAAGAGCCCGTTGTACTCTTCGAGCTGATGACATCACCAGGGCCTGCCACCGCACCGGCGGCCGTGTCCGCACCCTCAACATGGACCGTTTTCATCCGCTGTTCAATGCCTCCCCGGGCTCGGATTTGCCGGTTGTTCGTCGAGACGATGAATCTGGTGGCGGAGGGGTCGTCCTCCAGTGCATGAAATGGGGGCTGATTCCTAGTTTTACTGAAAAATTCGAGAAACCTAATTACTTCAAGATGGTGATGGCATGCGATGGGTGTGTTTTGGGCTTCTTCAAGGTTTGCACAGATTTGAGTGGTGGTAGTAGTAGTTGGGCAGGCAAGAGTGTGTGTAGATGTGTGCTTAGAGGAACTAGCTGGTGCAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACACATCCGAAATGGCCCGACCACGACCCGAGACCCAAGACAAAACCCTCGCCGCCTATTCCCGAGTCGTATCGTGCTGCTCCGTCGACGTCGTGACCGTCGTCGTGGGCGACACCATCCGACTAACCCACCCGAGTTCGAGCACATGGATATGGCCATGGCTTCTCTCTTCAACATACCCTAAGAGTTTGTACGGAATCTTGATCTAG

Protein sequence

MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVVLQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLRGTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKSGMDDDTSEMARPRPETQDKTLAAYSRVVSCCSVDVVTVVVGDTIRLTHPSSSTWIWPWLLSSTYPKSLYGILI

Homology

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BLAST of Lsi02G021560 vs. ExPASy Swiss-Prot
Match: Q6P7N4 (Abasic site processing protein HMCES OS=Xenopus tropicalis OX=8364 GN=hmces PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.5e-34
Identity = 96/313 (30.67%), Postives = 150/313 (47.92%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRAC---HRTGGRV----RTLNMDRFHPLFNASPGSDLPVV----- 60
           MCGR  CTL  DD+ +AC    + GGR     R  + D++ P +N SP S+ PV+     
Sbjct: 1   MCGRTACTLAPDDVRKACTYRDKQGGRKWPNWRDGDSDKYQPSYNKSPQSNSPVLLSLKH 60

Query: 61  -RRDDESGGGGVVLQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSS 120
            ++D +S     VL  M+WGLIPS+   F +P+  KM    + C                
Sbjct: 61  FQKDADSSER--VLAAMRWGLIPSW---FNEPDPSKMQYKTNNC---------------- 120

Query: 121 SWAGKSVCRCVLRGTSWCSICNVQFNARSESICEKASFR-RLVPKRRCLVAVEGFYEWKK 180
                                      RS+++ EKA ++  L   +RC+V  +GFYEW++
Sbjct: 121 ---------------------------RSDTMTEKALYKASLFKGKRCVVLADGFYEWQR 180

Query: 181 DGSKKQPYYIHFK----------------DGQPLV-LAALYDCWE-NSEGELLHTFTILT 240
             S+KQPYYI+F                 +GQ L+ +A L+DCWE  + GE L+++T++T
Sbjct: 181 QNSEKQPYYIYFPQIKAEKSPAEQDITDWNGQRLLTMAGLFDCWEPPNGGETLYSYTVIT 240

Query: 241 TSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPYEAPDLVWYPVTPSMGKP 282
             SS  + W+HDRMP IL   E +  WL+       DA+   +   ++ ++PV+  +   
Sbjct: 241 VDSSKTMNWIHDRMPAILDGDEAVRKWLDFGEVPTKDALKLIHPIENITYHPVSTVVNNS 265

[Close]

BLAST of Lsi02G021560 vs. ExPASy Swiss-Prot
Match: Q6IND6 (Abasic site processing protein HMCES OS=Xenopus laevis OX=8355 GN=hmces PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.1e-31
Identity = 94/313 (30.03%), Postives = 146/313 (46.65%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRAC-------HRTGGRVRTLNMDRFHPLFNASPGSDLPVV----- 60
           MCGR  CTL  DD+++AC        +   + R  + D++ P +N SP S+ PV+     
Sbjct: 1   MCGRTACTLAPDDVSKACSYQDKQGRQKCPKWRDGDTDKYQPSYNKSPQSNNPVLLSLKH 60

Query: 61  -RRDDESGGGGVVLQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSS 120
            ++D +S     VL  M+WGLIPS+   F + +  KM    + C                
Sbjct: 61  FQKDADSSER--VLAAMRWGLIPSW---FNELDPSKMQYKTNNC---------------- 120

Query: 121 SWAGKSVCRCVLRGTSWCSICNVQFNARSESICEKASFRR-LVPKRRCLVAVEGFYEWKK 180
                                      RS++I EKA ++  L   RRC+V  +GFYEWK+
Sbjct: 121 ---------------------------RSDTITEKALYKAPLFKGRRCVVLADGFYEWKR 180

Query: 181 DGSKKQPYYIHFK----------------DGQPLV-LAALYDCWE-NSEGELLHTFTILT 240
              +KQPYYI+F                 +GQ L+ +A L+DCWE  S GE L+++T++T
Sbjct: 181 QDGEKQPYYIYFPQIKSEKFPEEQDMMDWNGQRLLTMAGLFDCWEPPSGGEPLYSYTVIT 240

Query: 241 TSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPYEAPDLVWYPVTPSMGKP 282
             SS  +  +HDRMP IL   E +  WL+    S  DA+   +   ++ ++PV+  +   
Sbjct: 241 VDSSKTMNCIHDRMPAILDGDEAIRKWLDFGEVSTQDALKLIHPIENITYHPVSTVVNNS 265

[Close]

BLAST of Lsi02G021560 vs. ExPASy Swiss-Prot
Match: Q5ZJT1 (Abasic site processing protein HMCES OS=Gallus gallus OX=9031 GN=HMCES PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.4e-28
Identity = 88/312 (28.21%), Postives = 143/312 (45.83%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRAC---HRTGGRVRT--LNMDRFHPLFNASPGSDLPV------VR 60
           MCGR  C+L A  + RAC    R G R +   L   R+ P +N  P S  PV      V+
Sbjct: 1   MCGRTACSLGAARLRRACAYRDRQGRRQQPEWLREGRYRPSYNKGPQSSGPVLLSRKHVQ 60

Query: 61  RDDESGGGGVVLQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSW 120
           +D +S     VL  M+WGL+PS+   F++ +  KM      C                  
Sbjct: 61  QDADSSER--VLMDMRWGLVPSW---FKEDDPSKMQFKTSNC------------------ 120

Query: 121 AGKSVCRCVLRGTSWCSICNVQFNARSESICEKASFR-RLVPKRRCLVAVEGFYEWKKDG 180
                                    RS+++  K+S++  L+  +RC+V  +GFYEW++ G
Sbjct: 121 -------------------------RSDTMLSKSSYKGPLLKGKRCVVLADGFYEWQQRG 180

Query: 181 SKKQPYYIHFKDGQP------------------LVLAALYDCWENSE-GELLHTFTILTT 240
             KQPY+I+F   +                   L +A ++DCWE  + GE L+T+TI+T 
Sbjct: 181 GGKQPYFIYFPQNKKHPAEEEEDSDEEWRGWRLLTMAGIFDCWEPPKGGEPLYTYTIITV 240

Query: 241 SSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPYEAPDLVWYPVTPSMGKPS 282
            +S  + ++H RMP IL   E ++ WL+ +     +A+     A ++ ++PV+  +    
Sbjct: 241 DASEDVSFIHHRMPAILDGDEAIEKWLDFAEVPTREAMKLIRPAENIAFHPVSTFVNSVR 264

[Close]

BLAST of Lsi02G021560 vs. ExPASy Swiss-Prot
Match: Q5XIJ1 (Abasic site processing protein HMCES OS=Rattus norvegicus OX=10116 GN=Hmces PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 9.3e-27
Identity = 91/351 (25.93%), Postives = 157/351 (44.73%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRAC---HRTGGR--VRTLNMDRFHPLFNASPGSDLPV----VRRD 60
           MCGR  C L  D +TRAC    R G R   +  + D++ P +N SP S  PV    +  +
Sbjct: 1   MCGRTSCHLPRDALTRACAYLDRQGRRQLPQWRDPDKYCPSYNKSPQSSSPVLLSRLHFE 60

Query: 61  DESGGGGVVLQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAG 120
            ++     ++  M+WGL+PS+   F++ +  K+      C                    
Sbjct: 61  KDADSSDRIIFPMRWGLVPSW---FKESDPSKLQFNTSNC-------------------- 120

Query: 121 KSVCRCVLRGTSWCSICNVQFNARSESICEKASFRRLVPK-RRCLVAVEGFYEWKK--DG 180
                                  RS++I EK SF+  + K RRC+V  +GFYEW++    
Sbjct: 121 -----------------------RSDTIMEKQSFKAPLGKGRRCVVLADGFYEWQRCQGT 180

Query: 181 SKKQPYYIHF------KDGQP------------------LVLAALYDCWENSEGELLHTF 240
           +++QPY+I+F      K G+                   L +A ++DCWE  +GE L+++
Sbjct: 181 NQRQPYFIYFPQSKTEKSGENSGSDSLNNKEEVWDNWRLLTMAGIFDCWEPPKGERLYSY 240

Query: 241 TILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPYEAPDLVWYPVTPS 300
           +I+T  S   L  +H RMP IL  +E +  WL+    S  +A+   +   ++ ++PV+P 
Sbjct: 241 SIITVDSCRGLSDIHSRMPAILDGEEAVSKWLDFGEVSTQEALKLIHPIDNITFHPVSPV 300

Query: 301 MGKPSFDGPDC-------IKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEK 309
           +     + P+C       +K+    +  S  + ++ + K  +KE  D  +K
Sbjct: 301 VNNSRNNTPECLAPADLLVKKEPKASGSSQRMMQWLATKSPKKEVPDSPKK 305

[Close]

BLAST of Lsi02G021560 vs. ExPASy Swiss-Prot
Match: Q8R1M0 (Abasic site processing protein HMCES OS=Mus musculus OX=10090 GN=Hmces PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.3e-25
Identity = 90/351 (25.64%), Postives = 156/351 (44.44%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRAC---HRTGGR--VRTLNMDRFHPLFNASPGSDLPV----VRRD 60
           MCGR  C L  + +TRAC    R G R   +  + D++ P +N SP S  PV    +  +
Sbjct: 1   MCGRTSCHLPREVLTRACAYQDRQGRRRLPQWRDPDKYCPSYNKSPQSSSPVLLSRLHFE 60

Query: 61  DESGGGGVVLQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAG 120
            ++     ++  M+WGL+PS+   F++ +  K+      C                    
Sbjct: 61  KDADSSDRIIIPMRWGLVPSW---FKESDPSKLQFNTTNC-------------------- 120

Query: 121 KSVCRCVLRGTSWCSICNVQFNARSESICEKASFRRLVPK-RRCLVAVEGFYEWKK--DG 180
                                  RS++I EK SF+  + K RRC+V  +GFYEW++    
Sbjct: 121 -----------------------RSDTIMEKQSFKVPLGKGRRCVVLADGFYEWQRCQGT 180

Query: 181 SKKQPYYIHF------KDG------------------QPLVLAALYDCWENSEGELLHTF 240
           +++QPY+I+F      K G                  + L +A ++DCWE   GE L+++
Sbjct: 181 NQRQPYFIYFPQIKTEKSGGNDASDSSDNKEKVWDNWRLLTMAGIFDCWEAPGGECLYSY 240

Query: 241 TILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPYEAPDLVWYPVTPS 300
           +I+T  S   L  +H RMP IL  +E +  WL+    +  +A+   +   ++ ++PV+P 
Sbjct: 241 SIITVDSCRGLSDIHSRMPAILDGEEAVSKWLDFGEVATQEALKLIHPIDNITFHPVSPV 300

Query: 301 MGKPSFDGPDC-------IKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEK 309
           +     + P+C       +K+    N  S  + ++ + K  +KE  D  +K
Sbjct: 301 VNNSRNNTPECLAPADLLVKKEPKANGSSQRMMQWLATKSPKKEVPDSPKK 305

[Close]

BLAST of Lsi02G021560 vs. ExPASy TrEMBL
Match: A0A0A0K6X8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G371760 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 3.3e-160
Identity = 295/382 (77.23%), Postives = 308/382 (80.63%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLRADDITRACHRTGG VR+LNMDRF PLFNASPGSDLPVVRRDDES  GGVV
Sbjct: 1   MCGRARCTLRADDITRACHRTGGPVRSLNMDRFRPLFNASPGSDLPVVRRDDESSDGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFTEKFEKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTEKFEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSESI EKASF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESIHEKASFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           GQPL LAALYDCWEN EGELL+TFTILTTSSSPAL+WLHDRMPVILGDKERMDMWLNDSS
Sbjct: 181 GQPLALAALYDCWENLEGELLYTFTILTTSSSPALKWLHDRMPVILGDKERMDMWLNDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD+VLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKE +K
Sbjct: 241 SSKYDSVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKK 300

Query: 301 EHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDR 360
           E+S  +EKT  NTSVK EASPSLEEHKR+VN  AS EESKD LAK SSDT+ T QIKRDR
Sbjct: 301 EYSVSQEKTCSNTSVKPEASPSLEEHKREVNRGASSEESKDCLAKCSSDTSLTYQIKRDR 335

Query: 361 EDISSESKSGMDDDTSEMARPR 383
           EDISS+ KSGMDD +   + P+
Sbjct: 361 EDISSDLKSGMDDYSKVGSSPK 335

[Close]

BLAST of Lsi02G021560 vs. ExPASy TrEMBL
Match: A0A1S3C6L7 (putative SOS response-associated peptidase YobE isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497636 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 9.4e-131
Identity = 234/302 (77.48%), Postives = 241/302 (79.80%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLRADDITRACHRTGG VR+LNMDRF PLFNASPGSDLPVVRRDDES  GGVV
Sbjct: 1   MCGRARCTLRADDITRACHRTGGPVRSLNMDRFRPLFNASPGSDLPVVRRDDESSDGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFTEKFEKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTEKFEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSESI EK SF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESIHEKPSFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           G+PL LAALYDCWEN EGELL+TFTILTTS SPAL+WLHDRMPVILGDKERMDMWL+DSS
Sbjct: 181 GKPLALAALYDCWENLEGELLYTFTILTTSPSPALKWLHDRMPVILGDKERMDMWLDDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD V KPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKE +K
Sbjct: 241 SSKYDTVFKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKK 255

Query: 301 EH 303
            +
Sbjct: 301 RN 255

[Close]

BLAST of Lsi02G021560 vs. ExPASy TrEMBL
Match: A0A1S3C774 (embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497636 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 3.3e-128
Identity = 232/302 (76.82%), Postives = 239/302 (79.14%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLRADDITRACHRTGG VR+LNMDRF PLFNASPGSDLPVVRRDDES  GGVV
Sbjct: 1   MCGRARCTLRADDITRACHRTGGPVRSLNMDRFRPLFNASPGSDLPVVRRDDESSDGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFTEKFEKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTEKFEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSESI EK SF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESIHEKPSFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           G+PL LAALYDCWEN EGELL+TFTILTTS SPAL+WLHDRMPVILGDKERMDMWL+DSS
Sbjct: 181 GKPLALAALYDCWENLEGELLYTFTILTTSPSPALKWLHDRMPVILGDKERMDMWLDDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD V KPYEAPDLVWYPVTPSMGKPSFDGPDCIKE  LKNDGSNLISKFFSAKE +K
Sbjct: 241 SSKYDTVFKPYEAPDLVWYPVTPSMGKPSFDGPDCIKE--LKNDGSNLISKFFSAKETKK 253

Query: 301 EH 303
            +
Sbjct: 301 RN 253

[Close]

BLAST of Lsi02G021560 vs. ExPASy TrEMBL
Match: A0A6J1H9B1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111461258 OS=Cucurbita moschata OX=3662 GN=LOC111461258 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 9.7e-128
Identity = 230/302 (76.16%), Postives = 239/302 (79.14%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLR DDI+RACHRTGG +R+LNMDRF PLFNASPGSDLPVVRRDDES GGGVV
Sbjct: 1   MCGRARCTLRTDDISRACHRTGGPIRSLNMDRFRPLFNASPGSDLPVVRRDDESDGGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFT K EKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTGKSEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSES+ EKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESMSEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           GQPLV AALYD WEN EGELL+TFTILTTSSSPALEWLHDRMPVILGDKER+DMWLNDSS
Sbjct: 181 GQPLVFAALYDSWENPEGELLYTFTILTTSSSPALEWLHDRMPVILGDKERIDMWLNDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD VLKPYEAPDLVWYPVTP+MGK SFDGPDCIKEIQLK DG+NLISKFFSAKE  K
Sbjct: 241 SSKYDNVLKPYEAPDLVWYPVTPAMGKLSFDGPDCIKEIQLKTDGNNLISKFFSAKETXK 255

Query: 301 EH 303
            +
Sbjct: 301 RN 255

[Close]

BLAST of Lsi02G021560 vs. ExPASy TrEMBL
Match: A0A6J1KPK2 (LOW QUALITY PROTEIN: uncharacterized protein LOC111497557 OS=Cucurbita maxima OX=3661 GN=LOC111497557 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 2.8e-127
Identity = 230/302 (76.16%), Postives = 238/302 (78.81%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLR DDI+RACHRTGG +R+LNMDRF PLFNASPGSDLPVVRRDDES GGGVV
Sbjct: 1   MCGRARCTLRTDDISRACHRTGGPIRSLNMDRFRPLFNASPGSDLPVVRRDDESDGGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFT K EKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTGKSEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSESI EKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESISEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           GQPLV AALYD WEN EGE L+TFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS
Sbjct: 181 GQPLVFAALYDSWENPEGESLYTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD VLKPYEAPDLVWYPVTP+MGK SFDGPDCIKEIQ K+DG+NLISKFFSAKE  K
Sbjct: 241 SSKYDNVLKPYEAPDLVWYPVTPAMGKLSFDGPDCIKEIQSKSDGNNLISKFFSAKETXK 255

Query: 301 EH 303
            +
Sbjct: 301 RN 255

[Close]

BLAST of Lsi02G021560 vs. NCBI nr
Match: XP_038896829.1 (abasic site processing protein YoqW isoform X1 [Benincasa hispida])

HSP 1 Score: 594.3 bits (1531), Expect = 8.3e-166
Identity = 302/382 (79.06%), Postives = 312/382 (81.68%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLRADDI RACHRTGGRVRTLNMDRF PLFNASPGSDLPVVRRDDESG GGVV
Sbjct: 1   MCGRARCTLRADDIPRACHRTGGRVRTLNMDRFRPLFNASPGSDLPVVRRDDESGDGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFTEKFEKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTEKFEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSESI EKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESIREKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           G+PLVLAALYDCWEN EGELL+TFTILTTS+SPAL WLHDRMPVILGDKERMDMWLNDSS
Sbjct: 181 GRPLVLAALYDCWENPEGELLYTFTILTTSASPALLWLHDRMPVILGDKERMDMWLNDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD VLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFF AKEI+K
Sbjct: 241 SSKYDTVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFYAKEIKK 300

Query: 301 EHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDR 360
           EHSD +EKT CNT VK EASPSLEEHK DVNL AS EESKD LAK SS+TAPTCQIKRDR
Sbjct: 301 EHSDSQEKTSCNTYVKPEASPSLEEHKTDVNLRASSEESKDCLAKCSSETAPTCQIKRDR 335

Query: 361 EDISSESKSGMDDDTSEMARPR 383
           EDISS SKSG+DD +   + P+
Sbjct: 361 EDISSVSKSGVDDYSKVGSSPK 335

[Close]

BLAST of Lsi02G021560 vs. NCBI nr
Match: XP_038896830.1 (abasic site processing protein HMCES isoform X2 [Benincasa hispida])

HSP 1 Score: 585.5 bits (1508), Expect = 3.9e-163
Identity = 300/382 (78.53%), Postives = 310/382 (81.15%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLRADDI RACHRTGGRVRTLNMDRF PLFNASPGSDLPVVRRDDESG GGVV
Sbjct: 1   MCGRARCTLRADDIPRACHRTGGRVRTLNMDRFRPLFNASPGSDLPVVRRDDESGDGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFTEKFEKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTEKFEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSESI EKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESIREKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           G+PLVLAALYDCWEN EGELL+TFTILTTS+SPAL WLHDRMPVILGDKERMDMWLNDSS
Sbjct: 181 GRPLVLAALYDCWENPEGELLYTFTILTTSASPALLWLHDRMPVILGDKERMDMWLNDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD VLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKE  LKNDGSNLISKFF AKEI+K
Sbjct: 241 SSKYDTVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKE--LKNDGSNLISKFFYAKEIKK 300

Query: 301 EHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDR 360
           EHSD +EKT CNT VK EASPSLEEHK DVNL AS EESKD LAK SS+TAPTCQIKRDR
Sbjct: 301 EHSDSQEKTSCNTYVKPEASPSLEEHKTDVNLRASSEESKDCLAKCSSETAPTCQIKRDR 333

Query: 361 EDISSESKSGMDDDTSEMARPR 383
           EDISS SKSG+DD +   + P+
Sbjct: 361 EDISSVSKSGVDDYSKVGSSPK 333

[Close]

BLAST of Lsi02G021560 vs. NCBI nr
Match: XP_011659220.1 (uncharacterized protein LOC101206083 isoform X1 [Cucumis sativus] >KGN44679.1 hypothetical protein Csa_015996 [Cucumis sativus])

HSP 1 Score: 574.7 bits (1480), Expect = 6.8e-160
Identity = 295/382 (77.23%), Postives = 308/382 (80.63%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLRADDITRACHRTGG VR+LNMDRF PLFNASPGSDLPVVRRDDES  GGVV
Sbjct: 1   MCGRARCTLRADDITRACHRTGGPVRSLNMDRFRPLFNASPGSDLPVVRRDDESSDGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFTEKFEKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTEKFEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSESI EKASF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESIHEKASFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           GQPL LAALYDCWEN EGELL+TFTILTTSSSPAL+WLHDRMPVILGDKERMDMWLNDSS
Sbjct: 181 GQPLALAALYDCWENLEGELLYTFTILTTSSSPALKWLHDRMPVILGDKERMDMWLNDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD+VLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKE +K
Sbjct: 241 SSKYDSVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKK 300

Query: 301 EHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDR 360
           E+S  +EKT  NTSVK EASPSLEEHKR+VN  AS EESKD LAK SSDT+ T QIKRDR
Sbjct: 301 EYSVSQEKTCSNTSVKPEASPSLEEHKREVNRGASSEESKDCLAKCSSDTSLTYQIKRDR 335

Query: 361 EDISSESKSGMDDDTSEMARPR 383
           EDISS+ KSGMDD +   + P+
Sbjct: 361 EDISSDLKSGMDDYSKVGSSPK 335

[Close]

BLAST of Lsi02G021560 vs. NCBI nr
Match: XP_011659221.1 (uncharacterized protein LOC101206083 isoform X2 [Cucumis sativus])

HSP 1 Score: 565.8 bits (1457), Expect = 3.2e-157
Identity = 293/382 (76.70%), Postives = 306/382 (80.10%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLRADDITRACHRTGG VR+LNMDRF PLFNASPGSDLPVVRRDDES  GGVV
Sbjct: 1   MCGRARCTLRADDITRACHRTGGPVRSLNMDRFRPLFNASPGSDLPVVRRDDESSDGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFTEKFEKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTEKFEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSESI EKASF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD
Sbjct: 121 -----------FNARSESIHEKASFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           GQPL LAALYDCWEN EGELL+TFTILTTSSSPAL+WLHDRMPVILGDKERMDMWLNDSS
Sbjct: 181 GQPLALAALYDCWENLEGELLYTFTILTTSSSPALKWLHDRMPVILGDKERMDMWLNDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD+VLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKE  LKNDGSNLISKFFSAKE +K
Sbjct: 241 SSKYDSVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKE--LKNDGSNLISKFFSAKETKK 300

Query: 301 EHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDR 360
           E+S  +EKT  NTSVK EASPSLEEHKR+VN  AS EESKD LAK SSDT+ T QIKRDR
Sbjct: 301 EYSVSQEKTCSNTSVKPEASPSLEEHKREVNRGASSEESKDCLAKCSSDTSLTYQIKRDR 333

Query: 361 EDISSESKSGMDDDTSEMARPR 383
           EDISS+ KSGMDD +   + P+
Sbjct: 361 EDISSDLKSGMDDYSKVGSSPK 333

[Close]

BLAST of Lsi02G021560 vs. NCBI nr
Match: KAG6593042.1 (Abasic site processing protein HMCES, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025449.1 Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.5 bits (1360), Expect = 5.6e-146
Identity = 278/396 (70.20%), Postives = 301/396 (76.01%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDESGGGGVV 60
           MCGRARCTLR DDI+RACHRTGG +R+LNMDRF PLFNASPGSDLPVVRRDDES GGGVV
Sbjct: 1   MCGRARCTLRTDDISRACHRTGGPIRSLNMDRFRPLFNASPGSDLPVVRRDDESDGGGVV 60

Query: 61  LQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVLR 120
           LQCMKWGLIPSFT K EKPNYFKM                                    
Sbjct: 61  LQCMKWGLIPSFTGKSEKPNYFKM------------------------------------ 120

Query: 121 GTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKD 180
                      FNARSES+ EKASFRRLVPKRRCLVAVEGFYEWKKDGS+KQPYYIHFKD
Sbjct: 121 -----------FNARSESMSEKASFRRLVPKRRCLVAVEGFYEWKKDGSRKQPYYIHFKD 180

Query: 181 GQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSS 240
           GQPLV AALYD WEN EGELL+TFTILTTSSSPALEWLHDRMPVILGDKER+DMWLNDSS
Sbjct: 181 GQPLVFAALYDSWENPEGELLYTFTILTTSSSPALEWLHDRMPVILGDKERIDMWLNDSS 240

Query: 241 SSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQK 300
           SSKYD VLKPYEAPDLVWYPVTP+MGK SFDGPDCIKEIQLK DG+NLISKFFSAKE +K
Sbjct: 241 SSKYDNVLKPYEAPDLVWYPVTPAMGKLSFDGPDCIKEIQLKTDGNNLISKFFSAKETKK 300

Query: 301 EHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASF-----EESKDFLAKRSSDTAPTCQ 360
           E SD +EKT CNTSVK E S +LEEHKRD +  AS       +S+D LAK  S TA TC+
Sbjct: 301 EPSDSQEKTSCNTSVKPEPSQNLEEHKRDEDHVASSCSIRDNKSEDNLAK-CSPTASTCR 348

Query: 361 IKRDREDISSESKSGMDDDT--SEMARPRPETQDKT 390
            KRDRE  SSES+ G++DD+  S  ++ R +   KT
Sbjct: 361 TKRDREGFSSESEIGVNDDSKISSSSKIRKKVSLKT 348

[Close]

BLAST of Lsi02G021560 vs. TAIR 10
Match: AT2G26470.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). )

HSP 1 Score: 355.1 bits (910), Expect = 7.9e-98
Identity = 176/327 (53.82%), Postives = 222/327 (67.89%), Query Frame = 0


Query: 1   MCGRARCTLRADDITRACHRTGGRVRTLNMDRFHPLFNASPGSDLPVVRRDDES-GGGGV 60
           MCGR RCTLR DD+ RA HR     R L++DR+ P +N +PGS +PV+RRD+E   G GV
Sbjct: 1   MCGRTRCTLRPDDVPRASHRHTVPTRFLHLDRYRPSYNVAPGSYIPVLRRDNEEVVGDGV 60

Query: 61  VLQCMKWGLIPSFTEKFEKPNYFKMVMACDGCVLGFFKVCTDLSGGSSSWAGKSVCRCVL 120
           V+ CMKWGL+PSFT+K +KP++FKM                                   
Sbjct: 61  VVHCMKWGLVPSFTKKTDKPDFFKM----------------------------------- 120

Query: 121 RGTSWCSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFK 180
                       FNARSES+ EKASFRRL+PK RCLVAV+GFYEWKK+GSKKQPYYIHF+
Sbjct: 121 ------------FNARSESVAEKASFRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFE 180

Query: 181 DGQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDS 240
           DG+PLV AAL+D W+NS GE L+TFTILTT+SS AL+WLHDRMPVILGDK+ +D WL+D 
Sbjct: 181 DGRPLVFAALFDTWQNSGGETLYTFTILTTASSSALQWLHDRMPVILGDKDSIDTWLDDP 240

Query: 241 SSSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQ 300
           S++K   +L PYE  DLVWYPVT ++GKP+FDGP+CI++I LK   ++LISKFFS K+ +
Sbjct: 241 STTKLQPLLSPYEKSDLVWYPVTSAIGKPTFDGPECIQQIPLKTSQNSLISKFFSTKQPK 280

Query: 301 KEHSDPEEK-TFCNTSVKHEASPSLEE 326
            +  D E K T  N  V  +  P+ E+
Sbjct: 301 TDEGDKETKSTDANIIVDLKKEPTAEK 280

The following BLAST results are available for this feature:

BLAST of Lsi02G021560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6P7N4	3.5e-34	30.67	Abasic site processing protein HMCES OS=Xenopus tropicalis OX=8364 GN=hmces PE=2...	[more]
Q6IND6	2.1e-31	30.03	Abasic site processing protein HMCES OS=Xenopus laevis OX=8355 GN=hmces PE=2 SV=...	[more]
Q5ZJT1	8.4e-28	28.21	Abasic site processing protein HMCES OS=Gallus gallus OX=9031 GN=HMCES PE=2 SV=1	[more]
Q5XIJ1	9.3e-27	25.93	Abasic site processing protein HMCES OS=Rattus norvegicus OX=10116 GN=Hmces PE=2...	[more]
Q8R1M0	1.3e-25	25.64	Abasic site processing protein HMCES OS=Mus musculus OX=10090 GN=Hmces PE=1 SV=1	[more]

BLAST of Lsi02G021560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6X8	3.3e-160	77.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G371760 PE=3 SV=1	[more]
A0A1S3C6L7	9.4e-131	77.48	putative SOS response-associated peptidase YobE isoform X1 OS=Cucumis melo OX=36...	[more]
A0A1S3C774	3.3e-128	76.82	embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 ...	[more]
A0A6J1H9B1	9.7e-128	76.16	LOW QUALITY PROTEIN: uncharacterized protein LOC111461258 OS=Cucurbita moschata ...	[more]
A0A6J1KPK2	2.8e-127	76.16	LOW QUALITY PROTEIN: uncharacterized protein LOC111497557 OS=Cucurbita maxima OX...	[more]

BLAST of Lsi02G021560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896829.1	8.3e-166	79.06	abasic site processing protein YoqW isoform X1 [Benincasa hispida]	[more]
XP_038896830.1	3.9e-163	78.53	abasic site processing protein HMCES isoform X2 [Benincasa hispida]	[more]
XP_011659220.1	6.8e-160	77.23	uncharacterized protein LOC101206083 isoform X1 [Cucumis sativus] >KGN44679.1 hy...	[more]
XP_011659221.1	3.2e-157	76.70	uncharacterized protein LOC101206083 isoform X2 [Cucumis sativus]	[more]
KAG6593042.1	5.6e-146	70.20	Abasic site processing protein HMCES, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Lsi02G021560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26470.1	7.9e-98	53.82	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036590	SOS response associated peptidase-like	GENE3D	3.90.1680.10		coord: 15..286 e-value: 1.0E-67 score: 229.9
IPR036590	SOS response associated peptidase-like	SUPERFAMILY	143081	BB1717-like	coord: 2..274
IPR003738	SOS response associated peptidase (SRAP)	PFAM	PF02586	SRAP	coord: 131..267 e-value: 1.4E-50 score: 171.9 coord: 1..78 e-value: 8.0E-11 score: 41.9
IPR003738	SOS response associated peptidase (SRAP)	PANTHER	PTHR13604	DC12-RELATED	coord: 1..87 coord: 132..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..384
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G021560.1	Lsi02G021560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0018142	protein-DNA covalent cross-linking
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003697	single-stranded DNA binding