Lsi02G021050 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATGGCAGAAGGAGCTCAACAACAACACCCCTCTTCCCGGAAGACTGTAGCTACCAACAGTACGTCTTTTCAACAATTAATTAGTAGTAATTATTTGTTCGTTAATTAATTTTGACTCAATTAATTCTTTTGGTTATTTATATATAGTTAATTTTTTAGTAGTTAAATTCCTCTTGTTTGATATTGATAAAATGATCTTTAGTAATCTACCTGAATCCATAGACTTAATATTGATGCAATTCTGATAATCATCAATGGGATAATAGTAATCATTTATTGTGTATTAATAAGCACTGTTTTACGATATATAACCACAATAATCACCAATTTACTACAACTATATGGCTCCGTTTGATATATATATATATATTTTAAAAATTAACTCTATAAACATTAATTCTCCCTTCTATAAGTTTATAAGTTTCTATATGTTTTGTTAATCACTTTCTACAACTTATATTTTCGAAAGTCAAACTAAAATTTGAAAATTAAACTAAAAGAAATGGTTTCCAAAACTTTGTTTTTGTTTTGAGTATTTTCCTAGGAATTCAACTTTTTTTTTTTAAATTTTTTTTTATTATTATTTTTATAACAAAAGTGAAAACTAAGTCAACAATTGAAAGAAAAAATGGATAAATTTCAAAAACAGAAAATTGAAAAAAAATCATTATCAAATAAGACCTATGACAATAGTTTAACGCCATTTACCACCAAAATAATATGACTATGGTAAATTATTGATTTAGGGCCATGTTTATCCAAGGTGAAACGTAATAAATCAATGGTAATTTGAAAAGTGGGCCCCATTTGATTATGTTTAGTGTTGTTTACTTGTGTTTCGTACCCGTACTGACATATGAGTTCACCTCCAAATCTATAATAAAAAAATAAAAACTGATTGACGAGCGAAGGACGCTCAATTTAATTGCATTTGAAAATTACCGTTGATACCGTTACTGTTACCGATATTGTTATTGTTACAATATGAGAAGTATGAATCTGTCACATTTATGGTGTTTGAATCTAAACGTTAATAGTAACAATAAATTTGACATATTCATAATTCTAAGTAAAGGTGATAAAAAACAACCTCATTATGATTGATTAATCAATGGAATCTCATTCCAATTACATCGATTTTCATTAAAAATTGGTAAACGTGCCCTAATTATAATTTTGTGAAAGAAAAAAAAAAGGAAATAAGTGATTCTTAAAAAAGTTCCATATTTCAAAATATCGTTTTAGTGTGCTATCATTGCGATATTTTACTGACATTTGGCTAGATGAGCAAGCAACGCTTTTAATGAGAACCGAAATTTTGGGTCAAAAAATTCCACACGAACATATGCATATAGGTTGAGTGGGTAACTTTTTAATGTTCATATTTAGGTAAATTAAGCAGTGAATCTAATTTATCATTTGTATAAGAATGAAGTCAATCAAAGTTAATTGTGGAGGAATTAATATATACATTCCATATATTATAAAATCGTTTATAATATGTTAATACAGGTAATGCTAATTACCTGAAAAATGGAGTCACTACTGTTCCAGGTATGTAGAATCCCCAAAGCTCTAAGTTTTATTTTGTTTATTTATATATTGTTTCCATTTCAATGTTCATTAGATAAACAAAACAAAAATTTCATTTCAAGTTTAAGAGGATTGATGGATACTAAAGGGAAAATTATAGAGCATGATGGAGTAATGTGTAAAAATATAAAATGACAATGCAGAGAGAAAAGAAATCCAACAATCGGGAGAAGAGACAACATATATTATCGAATGCTAAGTTTGAAATGGTTAAAAGCACTGTTAAATGTATTTTTAAATAAATCATATTTTATGGTACGAAAAATTGTGTTTAAATGTTTAAAACCAAATACTACGTGCATGTTTGAGAATAGTAGTTGAAATAGTGATTTTAGTAAAAGAGATATAGGTAACAATTGATATTATAAAATTGATTTTCACACAATCATATTGATGTTTTGTTTTAACTAGGAAATTTTTAAAAATAAAAAAATAAGGGAAACTATTTACACAAAATAACAAAATTTTTAGATAGTTGTGATAGACTCTAATAGAGTGATAGAAACAATAGAAGTCTATCACTGATAGAAATCTATCAATATCTATCAATATTTTTTTTACTATTTTCTGTAAATAGTTTGACATTTTTTCTATTTGCGAAAATTTCTCTTTTAATTATTTTGTTTGGTTTTAAAAGTGATTTTACCATTATTAAATTACTAAAAAAACATTTTCTATATTTGAGCAAAATTATTTAATTAAAAACGGAAAAAATTATTGTTAAAGATAAGTAAGATTCAATATTTCAATAAATGAACGAAATGAGAAACTAATCACTCCACCAATAATCACCACTCAACTAATTAAAAAATAAATTTCAAATGATTTTAGATTTTTCCAAAATCAATTACAAAATTTGAAAGGAAACAGTTATTTTATGCAATGACAGCCTAACAAAATCACTCTGGAAAATAGATAAATCTAATACAGATCAACACAATTCAATTACAAAATCACTCTGAAAATAATCTTCTTCACAATTGTAGTTACAAAGGACGTTGGTTACTTTTGTCATACTATCCGACGAGTAGAAGCCATTGATAGTAAATCAAGTCAACAAAAAGTGGTTGATACAGAAGGTGAAGTAGTAGTAGTGCCAAATGAAATCAGTTCTTCTCATACTATTATTGGAGAAACAGAAGCCATTGATACTCATTCAAATCAACAGAACGTCATTGATACTACAAAATTAGTTGAAGAAGCAAATGATACGACTAATTCAAGTCAACACAAAGTCGTTGAAACTGAAATTGAAGTAGTACCCATTATTGATTTTCATTCAAATCAACACCAAGACAATAATATTGATACAGAAATTAGAGTAGTTCCAAATCAAGTTGGTTCTTCTCAAGAACAAGTAGTCAATAATAGTGCAACTTCAATTAAGAGCGAAATTCTTAAAAGTGTATTGTATGGTGGTTTGACTGAATTGATTGCAAGCTTAGGCATTGTAACATCTGCCTCAACTACTGGTGCTACCACAGGTAATAATTTTAATATTCCATTTATTATTCTTCCATTTTCTTTCTATATTTATTTCTAAATTAATATATACCTTCCATTAATTTTGCATTCATGCAGGAAAAATTGTAGGGCTTTCATTGGCAAACTTGATTACTGGAGTGTTTGTCATGATTTACAAGGTGAGCTATCATTACCATATTCCATTTATGAAAGGACAATGGTTATAGACTAATGAAATTGCTGTTTGGCTCACCAACTTCTTATCTTTTTCAATAGTAAATATTATTGAAGTTTGCACATTTATCGAGAGTAACTTCCACTTCCTATCTTTTTCTACTTTTCACATTTATCGAAGAATTCCATCTTTCCATCTATCTCTACTTTTGACATTTATCGAGTAACTCTATCTTCTCCCTCTTAATCCACTTTTCACAATTATCGAGAAACTCCATCTTCTAACTCTACACCTCAAACACAAACTTACTAATTCCAGACTTATTAACTTCACTCAGGGGGCCACGAGGTGTTTGGGGACGCTGAGTTGAGTTATGAATTTTGGAGTTAAGAAGTATGTGTTTGAGGTACAAAGTTTTAAGATGAAGTTCCTCGAGAATTGTATGTGTTTACTATTGAAGTTGAGTTATTTAATACTAATTTATGAAGTTGGTAGGCAGAACACACTCAAACGTTATTTAATGCAAAACCTAATAATTTTAACCATGATAGTATTTTTGAAGGTAACATTATAATTCCTGTATATTACATTTCAACCATGTTCAAGATCAATTATTCAAAAAATCATTCAGTTCATTTATTATAATTGAATTCGCAATTCGCAGATATCAGAACATTGGATAAAGGATGAAGAAAGTGGAGGTAATGAAGGAAAAGAACAGGAAGAAGAGGATAAATATGAAGAATTATTTGGAGATAGACAAAACCATCGTCTTCATTTGAGTGTGGCAATCGTATCATTCATAATATTTGGGTTGGTGCCACCTCTCATTTATGGGTTCACATTTCGTAAGCCAGAGGAGAAGATTCTGAAGATCCCAACAGTGACAATAGTTTCTGGTTTATTTATTGGATTACTTGGTGCAGCTAAAGCTTACATTGAGAAGCCAGAAAATTGCCTTGAGTATGTTTATATAATTGGCACATGCATTGTTGATGCAATTGGGACTTCAACATTGACAACTTTTGGAGGTGAGCTGATTGAAAACTATGTTGAGCAAGCTGGTTGGTTTGATTTTGGGGAAAATAATAAGGTTACAACAATATTGTTCTTACCTGGTATGGATAATTTTCAGAATCATACATGGAGATCCCTTTTTAAATTAAAATCCAACCTACCTAGCCCTCTTTGAATTGTTTCTTTCCTAAATGTTGTAATGCTTTCATGATATCTTGGGCTGTCTCACACTTTGTGGACTCTTGTGCCCTGTTCTTGTGGGATTTGAGGAAAACCTGATATATTTTTCAATTTCAATATTTCTTTTAG ATGGCTATGGCAGAAGGAGCTCAACAACAACACCCCTCTTCCCGGAAGACTGTAGCTACCAACAGTAATGCTAATTACCTGAAAAATGGAGTCACTACTGTTCCAGTTACAAAGGACGTTGGTTACTTTTGTCATACTATCCGACGAGTAGAAGCCATTGATAGTAAATCAAGTCAACAAAAAGTGGTTGATACAGAAGGTGAAGTAGTAGTAGTGCCAAATGAAATCAGTTCTTCTCATACTATTATTGGAGAAACAGAAGCCATTGATACTCATTCAAATCAACAGAACGTCATTGATACTACAAAATTAGTTGAAGAAGCAAATGATACGACTAATTCAAGTCAACACAAAGTCGTTGAAACTGAAATTGAAGTAGTACCCATTATTGATTTTCATTCAAATCAACACCAAGACAATAATATTGATACAGAAATTAGAGTAGTTCCAAATCAAGTTGGTTCTTCTCAAGAACAAGTAGTCAATAATAGTGCAACTTCAATTAAGAGCGAAATTCTTAAAAGTGTATTGTATGGTGGTTTGACTGAATTGATTGCAAGCTTAGGCATTGTAACATCTGCCTCAACTACTGGTGCTACCACAGGAAAAATTGTAGGGCTTTCATTGGCAAACTTGATTACTGGAGTGTTTGTCATGATTTACAAGATATCAGAACATTGGATAAAGGATGAAGAAAGTGGAGGTAATGAAGGAAAAGAACAGGAAGAAGAGGATAAATATGAAGAATTATTTGGAGATAGACAAAACCATCGTCTTCATTTGAGTGTGGCAATCGTATCATTCATAATATTTGGGTTGGTGCCACCTCTCATTTATGGGTTCACATTTCGTAAGCCAGAGGAGAAGATTCTGAAGATCCCAACAGTGACAATAGTTTCTGGTTTATTTATTGGATTACTTGGTGCAGCTAAAGCTTACATTGAGAAGCCAGAAAATTGCCTTGAGTATGTTTATATAATTGGCACATGCATTGTTGATGCAATTGGGACTTCAACATTGACAACTTTTGGAGGTGAGCTGATTGAAAACTATGTTGAGCAAGCTGGTTGGTTTGATTTTGGGGAAAATAATAAGGTTACAACAATATTGTTCTTACCTGGTATGGATAATTTTCAGAATCATACATGGAGATCCCTTTTTAAATTAAAATCCAACCTACCTAGCCCTCTTTGAATTGTTTCTTTCCTAAATGTTGTAATGCTTTCATGATATCTTGGGCTGTCTCACACTTTGTGGACTCTTGTGCCCTGTTCTTGTGGGATTTGAGGAAAACCTGATATATTTTTCAATTTCAATATTTCTTTTAG ATGGCTATGGCAGAAGGAGCTCAACAACAACACCCCTCTTCCCGGAAGACTGTAGCTACCAACAGTAATGCTAATTACCTGAAAAATGGAGTCACTACTGTTCCAGTTACAAAGGACGTTGGTTACTTTTGTCATACTATCCGACGAGTAGAAGCCATTGATAGTAAATCAAGTCAACAAAAAGTGGTTGATACAGAAGGTGAAGTAGTAGTAGTGCCAAATGAAATCAGTTCTTCTCATACTATTATTGGAGAAACAGAAGCCATTGATACTCATTCAAATCAACAGAACGTCATTGATACTACAAAATTAGTTGAAGAAGCAAATGATACGACTAATTCAAGTCAACACAAAGTCGTTGAAACTGAAATTGAAGTAGTACCCATTATTGATTTTCATTCAAATCAACACCAAGACAATAATATTGATACAGAAATTAGAGTAGTTCCAAATCAAGTTGGTTCTTCTCAAGAACAAGTAGTCAATAATAGTGCAACTTCAATTAAGAGCGAAATTCTTAAAAGTGTATTGTATGGTGGTTTGACTGAATTGATTGCAAGCTTAGGCATTGTAACATCTGCCTCAACTACTGGTGCTACCACAGGAAAAATTGTAGGGCTTTCATTGGCAAACTTGATTACTGGAGTGTTTGTCATGATTTACAAGATATCAGAACATTGGATAAAGGATGAAGAAAGTGGAGGTAATGAAGGAAAAGAACAGGAAGAAGAGGATAAATATGAAGAATTATTTGGAGATAGACAAAACCATCGTCTTCATTTGAGTGTGGCAATCGTATCATTCATAATATTTGGGTTGGTGCCACCTCTCATTTATGGGTTCACATTTCGTAAGCCAGAGGAGAAGATTCTGAAGATCCCAACAGTGACAATAGTTTCTGGTTTATTTATTGGATTACTTGGTGCAGCTAAAGCTTACATTGAGAAGCCAGAAAATTGCCTTGAGTATGTTTATATAATTGGCACATGCATTGTTGATGCAATTGGGACTTCAACATTGACAACTTTTGGAGGTGAGCTGATTGAAAACTATGTTGAGCAAGCTGGTTGGTTTGATTTTGGGGAAAATAATAAGGTTACAACAATATTGTTCTTACCTGGTATGGATAATTTTCAGAATCATACATGGAGATCCCTTTTTAAATTAAAATCCAACCTACCTAGCCCTCTTTGA MAMAEGAQQQHPSSRKTVATNSNANYLKNGVTTVPVTKDVGYFCHTIRRVEAIDSKSSQQKVVDTEGEVVVVPNEISSSHTIIGETEAIDTHSNQQNVIDTTKLVEEANDTTNSSQHKVVETEIEVVPIIDFHSNQHQDNNIDTEIRVVPNQVGSSQEQVVNNSATSIKSEILKSVLYGGLTELIASLGIVTSASTTGATTGKIVGLSLANLITGVFVMIYKISEHWIKDEESGGNEGKEQEEEDKYEELFGDRQNHRLHLSVAIVSFIIFGLVPPLIYGFTFRKPEEKILKIPTVTIVSGLFIGLLGAAKAYIEKPENCLEYVYIIGTCIVDAIGTSTLTTFGGELIENYVEQAGWFDFGENNKVTTILFLPGMDNFQNHTWRSLFKLKSNLPSPL Homology
BLAST of Lsi02G021050 vs. ExPASy Swiss-Prot
Match: Q8W4P8 (Membrane protein of ER body 1 OS=Arabidopsis thaliana OX=3702 GN=MEB1 PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.3e-27 Identity = 103/318 (32.39%), Postives = 167/318 (52.52%), Query Frame = 0
BLAST of Lsi02G021050 vs. ExPASy Swiss-Prot
Match: Q8LPT3 (Membrane protein of ER body-like protein OS=Arabidopsis thaliana OX=3702 GN=MEBL PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.2e-25 Identity = 76/201 (37.81%), Postives = 118/201 (58.71%), Query Frame = 0
BLAST of Lsi02G021050 vs. ExPASy Swiss-Prot
Match: F4KFS7 (Membrane protein of ER body 2 OS=Arabidopsis thaliana OX=3702 GN=MEB2 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.1e-24 Identity = 69/191 (36.13%), Postives = 111/191 (58.12%), Query Frame = 0
BLAST of Lsi02G021050 vs. ExPASy TrEMBL
Match: A0A6J1CSU1 (membrane protein of ER body 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014436 PE=3 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 1.6e-68 Identity = 156/279 (55.91%), Postives = 200/279 (71.68%), Query Frame = 0
BLAST of Lsi02G021050 vs. ExPASy TrEMBL
Match: A0A6J1JX70 (membrane protein of ER body 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488291 PE=3 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 3.1e-64 Identity = 149/273 (54.58%), Postives = 195/273 (71.43%), Query Frame = 0
BLAST of Lsi02G021050 vs. ExPASy TrEMBL
Match: A0A7N2ML73 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.0e-36 Identity = 92/221 (41.63%), Postives = 138/221 (62.44%), Query Frame = 0
BLAST of Lsi02G021050 vs. ExPASy TrEMBL
Match: I3T3H3 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 6.6e-35 Identity = 97/225 (43.11%), Postives = 133/225 (59.11%), Query Frame = 0
BLAST of Lsi02G021050 vs. ExPASy TrEMBL
Match: A0A6J1GPB8 (membrane protein of ER body 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455908 PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 8.7e-35 Identity = 99/242 (40.91%), Postives = 138/242 (57.02%), Query Frame = 0
BLAST of Lsi02G021050 vs. NCBI nr
Match: XP_023549430.1 (membrane protein of ER body 1-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 318.5 bits (815), Expect = 7.9e-83 Identity = 169/238 (71.01%), Postives = 203/238 (85.29%), Query Frame = 0
BLAST of Lsi02G021050 vs. NCBI nr
Match: XP_038897302.1 (membrane protein of ER body 1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 280.8 bits (717), Expect = 1.8e-71 Identity = 166/316 (52.53%), Postives = 214/316 (67.72%), Query Frame = 0
BLAST of Lsi02G021050 vs. NCBI nr
Match: XP_022144855.1 (membrane protein of ER body 2-like isoform X1 [Momordica charantia]) HSP 1 Score: 270.0 bits (689), Expect = 3.2e-68 Identity = 156/279 (55.91%), Postives = 200/279 (71.68%), Query Frame = 0
BLAST of Lsi02G021050 vs. NCBI nr
Match: XP_038897303.1 (uncharacterized protein LOC120085412 isoform X4 [Benincasa hispida]) HSP 1 Score: 269.2 bits (687), Expect = 5.5e-68 Identity = 163/316 (51.58%), Postives = 210/316 (66.46%), Query Frame = 0
BLAST of Lsi02G021050 vs. NCBI nr
Match: XP_038897300.1 (membrane protein of ER body-like protein isoform X1 [Benincasa hispida]) HSP 1 Score: 267.7 bits (683), Expect = 1.6e-67 Identity = 166/339 (48.97%), Postives = 214/339 (63.13%), Query Frame = 0
BLAST of Lsi02G021050 vs. TAIR 10
Match: AT4G27860.2 (vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 127.5 bits (319), Expect = 2.4e-29 Identity = 105/318 (33.02%), Postives = 169/318 (53.14%), Query Frame = 0
BLAST of Lsi02G021050 vs. TAIR 10
Match: AT4G27860.1 (vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 125.6 bits (314), Expect = 9.2e-29 Identity = 103/318 (32.39%), Postives = 167/318 (52.52%), Query Frame = 0
BLAST of Lsi02G021050 vs. TAIR 10
Match: AT4G27870.1 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 119.0 bits (297), Expect = 8.6e-27 Identity = 76/201 (37.81%), Postives = 118/201 (58.71%), Query Frame = 0
BLAST of Lsi02G021050 vs. TAIR 10
Match: AT5G24290.2 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 113.6 bits (283), Expect = 3.6e-25 Identity = 69/191 (36.13%), Postives = 111/191 (58.12%), Query Frame = 0
BLAST of Lsi02G021050 vs. TAIR 10
Match: AT5G24290.1 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 113.6 bits (283), Expect = 3.6e-25 Identity = 69/191 (36.13%), Postives = 111/191 (58.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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