Lsi02G020980 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G020980
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ankyrin repeat and SAM domain-containing protein 6
Location	chr02: 27173738 .. 27180656 (+)
RNA-Seq Expression	Lsi02G020980
Synteny	Lsi02G020980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGAAGTTAAAAAGCAAAAGATAATAGATACGAATTGGACTGCAATTCATTGGAAGACAAAAAAGTTGGATTTTGCATTCGCAACGAAGGAAAAACAAAAAACAAGAGCTTCTTTGCGACCCCAAAACTGCAGTTCCACCCCCCGCGCTCTCTTCTCTCACTCTCTTTCGATTTCTTCAGCTTTCAATTCATTTTTGAAATCTTTACGAGCACACTTGCTTCAGATTTTGCTTTCCAACACGATTTAGGGTTAGGGTTCAGTTCTTTGTCTCTCTGTAGTTCTAAACATGTATGCTGATCGATTGGAGGCCGATAACCATAGGTCTATAAAGGACCGGCTCAATGGAAACTCTTCTGACCTTTCTGCCCGACGGCGGCCGATTACTGGGAAGAGGTTCGTTGTCTTTTTTTCCCATTTATCTGGGTTTTTGGAAATTTTTTGAGATGTGGGAACTCATTGTTTTTAGGATCTTTGCTGTAGTTTGTGTAATTCGCAAGTTTTAGTACTCTGGTGGAATTGAGAGCTAAGACATTTTGGTACTGGCCTTTCTCTGCGGTTGAACTTGTTGGTTTTTGTGATTTTACTTAAGAGTGAAGGTGTTGCTTATTTTAGTTGTAACTTTGCGGTTCTTCTCGTTCTAGTTGTTTTTCGAATCTTGTAGATTTGTATGTCTTTAGAGCACCTTGAGCTGTTGATGGAATGCAGATTGTTTGGTTACGTTAGGTCAACACTCATCGTTAGTGGATCAATTGTGGTTGTGGTTGTGTTATTTTGGCTTCATCATTTAGGGCTGTTTTTTAGTTTTAGTTTTGTTTTCTATCCAAGCAGAAGCTCGAAGATTATGCTAAAGCTTTGTCACACATTCGTTATATATAGGTTTAATGTGTAATTGGAATTTACCATCGCCGAAAAAGAAAACTTACTTGGTCGATGCATTTGTCAAAGATCTTGAGATGGATATGGCTTTTATGCTTATCTGGTGCTACTATAGGGTGTAAGTGGCTCGGCTAGCTTGGTTTCTGGCTAAAAACTGAGATATTCGCGGTTTTAACTTATATGTAATTGGATTAACCTGCATTTATTAACCATACCAATCACGCTGACTTGGGTTTTTTTTTTTTTTCTTTTTTTCTTTTTTTCCAGTTTTAAATTTACCCCTCGACTTCTCTGGGAACTTTCCTTTTTATAGTTTCTTATAGCTTCCCAGCATCTCAACGAAAGTCCCATTTTCCATCCAAGAAAAAGTAACCTCCAAGATATGCTCACGCATTAGTATACATTTTTTTCATTTGATGTTAGATTGAACGTATCCTGGAAACTAATTTGATTGATGCATGCATAGATTATTTTCTCTAGTGTATGAAGAATAAGATTGTTGAAACTTTTCTGATATTTGGTGCTTACGTGTGAACTTTTTCATAGTTTTTTAAATGCGTGTTTTCTTGTTCCTTTCATTTTCAAAAGTAAGATGGCAATATGTGAATGGACTTTCTTTTTCAGTTTGGGCTTTTGGTTTTCTGAAGTTTGTTTTATTAACTTTGTGGATAGCCATAAATACTGCATCCTTATAATGAGAGTATTTGATTCTCTTGTTAACTACACTGTCGATGATCTACATGTTATTATTATTGAGTCTTCTGTATTCATTATATTATGCCCATACCAATGCATTCCAGGCAGAGACAAGATGACAAGTGGGAGCATGATCTCTATGAGGATGATGAACCACAAACTTCAAGTATGAATTGGTTGTAATTGTATCGCACATCTAAACCCTTCTTTTGTTAGATGGTTCTAATCCACTTTATATGCTCTTGACTATGTTCTAATGGCTTTAAAGATCGCAGAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAAAAGTCAACAACAAAGTGGAAATGCATCTTTTTCAGGAGTGCGGGATCTACGTGAAAAGTTGTCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCACCAAAACCAAAATTGGAAGTCACAAAAACACCCCGAAAAAATGATACTGTCGAAGCTCATCCTTCAACCACTCAAAAAGTTGTAGCCAAACCTACTACTAGGAAAAAGGCTGCTCAGAAGGCAAGAAACTTATATTTCTTTTTATGTCATTTTTGTTTTGTTTGTTTGTTTTGATTAGAAAATATGCATTCTGTTAAACACATGATGGAGGTTGGGGATTTTGGCATTCATTTTTTTTTTCTGGAAGACTTGCTTCTATGAGAATCTAAAAGTTTTTGGTCGTTGACATTGGTTGGGAGGACTTCTAGGTTGACATTGGTTGGGAGGACCTTTAGAAGTTATTTGTTTAAATAAACCCTTTCCTCAATAATGGGAGCCCAAGGAGCAATGTTTTGGCCATTAGAGGTCTTAGGTAGGGAGACCCTTTATCCCCTTTTTGTTCCACCTTGTGGTGGATTTCCTTAACAAAATTAATGTGTTGATGGTAAAATCCTTAAGCCCTTCGAGGATGGTAAGGATAGGGTGGGCCTCCCCCACCTTTAATTTGTCGATGATACTATCTTCTTTTGATTTGGAAATGAGGAGTCGTTCTTACTTTTGAATCACATCCTGGCTTTTTTTTGAAGGTTTGTTTGGGTTGAGGATTAATAGGAGTAAGAGCCATTTGTTAGGGCTCAGTGTTTTAAAAAGCCCTCTCGGGTGCGAGCCTAGGCTCAAGGCGCAGGCTTGGCGCCTCGCCTTGGAAAGGTGAGGCTCACAAAATAAGGCACACCTCAAGCGCACGCCTTTTGTGAAGCCCCAAGGCTCAAAGCCATGAGCCTTGGGTCTTTTTCATTAATTTTAAAAAATAGTAATAATTAAGGGTTTTCCTTCTTTATTAACTAAAAGAATCAAGTTTACTAAGCCTAAATGCAAATTTTCTTGTGTTTGGGGTATCTTTTTCCATATTTCCACTTCAACTATGCTTTCTCTTTTTAATGTAATATTTTTATATATAGTGCGCCTCACAAAAAAAAAAAGCCGTGCCTTTTTGTGCGCCTTGCGCCTAGGCTCCAGAGGGCCATTGCGTCTTAGTGCGCCTTGGGCATTTAAAAACACTGTTGGGGCTTAAGTGCGATGTTGAGAAGCTTGGAGCTGGGTCAAAGTGGTGGGTTGTGAAGTTGGTTGTCTCCCTTTCTCTTATCTTGGTCTTCGTCTTGAAAGTAACCTTAAATCTTTGTTTTTTTGGAGTCCTATTATGGATAAAGTTAGGAAAAGATTAGCCTCATGGAAAAAGGGGGTTTTCTCTAAAGTTGGCAAACTTGCTCTTGTTCAATCTATTTTGAGTGGCATCCCAATTTTTTACTTCTCCTTTTTTAGAGGTTTGAGTGTGGTTTGCAAGAATATTGAGAAGCTTGTGTGCAATTTCCTTTGGGAAAGAGTAGAAGAAGGAAAATGAAAAGAGGCGCACTTGGTCAAATGGGAGATCAATGAGAGGCCGATCACCTTGGGGGCGGGGGGGTTTAGTAATTTTGAATTTAAGGTTTTGCAACAAAGCACTATTACCCAAATGGCTTTGGTGTTTCCTCCCTGAGCACAATTCTCTTTGGCATAGGGTCATTACTAGTAAGTATGGTCCTCATTCTTTCAAGTGGCTATTAAGTAGAGTTAAAGTCTCGTACCAGAACTTATGGAAGGATATTTCTAGCTCCCTTTATTCGTTGTGTGGTACGAGAGGGGAAGGAAACTCGTTTTTGGGAAGATCAATGGGTGGGGAATAGATCCATGTTCTTTATGTTTCCCTGTCTTTATCATTTATATTCTCATAAAAATTGTTTGGTGTCTGACTTTCTAGTTTGGACGAGGAGCTCTTCTTCCTTCTCATTTGGGTTTCGTCAATCTATTGTCTTTGCATGAGGAGTATAACTTTAGGCTTGAGAGATGGGATTGGCGGGTGTGGAGTCCCAACCCTTCAAATGGATTCTTGTGTGAATCTTTTTTTCATAGTTTGATTGACTCTTCTCCTGATGAGCCAGTCTTTCTGTTATTTGGAAGATTAAGATCTCGAGGAAAGTGAAGTTTTTTATGTGGTCAAGCTAACTGGATGGATCGGCTTGCGAGGAAGTTGCCTTCATTAGTTGGTTGTTTTGGTTATATTCTCTGTCGAAAGGTGGAGGAAAACTTTGGATCATATTCTCTAGAGATGTGAGTTTGCGAGTTTCGTCTAGGATTACTTCTTTCAAACGTTCGGTTTCTTGCCAACTTGGCATAGGGACATGAGTGTTATGATCGGAGAGTTCCTCCTCCATCCGCCCCTTCATGAGAATGATTGCTTTTTATGGTTTTTCAAGGTGTGTGCTATTTTATGGGTTCTTTGGGGGGAGCGGAATAACATGGTGTGTGTAGAGGGATGGAGAGAGATCTTAGTCATGTTTGGTCTGTTGTTAGATTCTATGTTTCCCTCACGTTTATCCAGCTAGCTTTTCTCCGTGGTACTCAAATTCTATTTGTGAGAGCTCCTCTCCCTATCGGTCGAGCTGCTTCACTCCTTCTCTGGCATATCGAGCACTGCTTTTGTTTTAGCTGGGTCTACATTCGTGCCTTGTCGATTCACCAAATAACCAAGAAACTTCCCTGATGTTACTTCGAAGGCGCACGATACTATTACCTAGGGGGTTCATCTTCAACTGAGATTTTCTTGATCTTTCAAGAACCCTTTGTAGAGCTTCCGGATGTCCTTCTCCTGTCTTAGATTTGAACTTCGATTTTGAAGACATTTTATAATTATTTAGACACTATCCTGTATAGCTAGAGCCCTTTCTTTGGTGGAGTTCCCTTCTTTTGTGGGCTTAGTTTTTTGTATGCCCTTGTACTCTTTTATTTTTTTCTCAATGAAAGTTGTTGTCATATAATAATAATAATAATAATAATAAATAGCCCTTTTATTATATTTACTCTTTTGCTTTGTTGGCTTCTGAATTCTCTTGGAGCTCCTCCATTAGACCTTCATGGTATTCGAATTAGTGCATCAGTTATAGTTTTTGTCGTCTCCCTGAATCCTGTGTCTTGCTGCTTTGCTAATTTATTGAAGAGACGTCCTATCTGTGAGCCAAATGCATGTTATTTATGTCGATTCTTTTAGTTGAATTAAAATCTAAATAGGCTTACTGGATGCTATCCTAGACTCGTAGTAATCAAATTTGGAATAAGGGACTTTATGTTTCGATCGCCATCATGGGCTGAGTAACCATGTGAACTATTGAAACTTATATGTTTTGTTTTTTTAATTTTTTTTTTCCTTTTATTGATAAACATGAGTTTTGATGCAGAGTGATACATCAGTTGATGACTTCCTACAGTCCTTGGGTCTCGAAAAATATTCAATTACATTTCAAGCAGAGGAAGTATGAAAATCTTTATCTTTTCGATGATAAAATCCTGTTTTGAAGCTTTCAGCTGAACTTCCATAATTGATTATAACTTTGAACATCTTTCATATAGGTTGATATGACAGCGCTTGTACACATGGGAGATGAAGATCTCAAAGCTTTAGGAGTACCAATGGTAAACTTAGAAGACCTTGATTTAATTTCAAGCTTTTTATTTTCTAATTATGTGCATTGTATGTATTTGGCCGTCTTTTATCTTTAATACTTGTGTACATGCGTAGCTGGTTTGAACTCACCATTTAGTGTTTTAACTATTAACATTTGGTTTCAAACTTTCAAATGTTTTCTTCGCTCTTATATTAGATGTCGAAGCTGTGAGGTATGTATTGTTTTTTAGGCAGCTAGTTCCCTGAAGTCTAATGTTTTGGACCTATCACGTCTAGGACTAATAGCAGGATGTGGCTTCTCAGATAAGAATGTATTTGGTCAGTTATTATTCAATCAAAAGTAGTAGCTAAGAGAGAGTCTGTATGTAGACAATGCAAGCTAGCTCTCTCACCTTACTAATTCTACTCCAATGTTGAGGTGTAAGGTGCATTTTATATTATTGAGCTTTACCGAAAGAGCCAGGTGGATCTGATCTGGCTAATATACATATAAGCAACAAACTGACATCACTCCTAGAAGTTTCAAACTTCTATGTCAAAACTTTCATCCAACTGCGCAGAAGATTTATAGAAGAATCTTTCAGTTTTTTGTACAATTTCTTGTCTTAAAAAAGATAGTTCTCTGTTATCAGTTGGATGACCGTACTTCATGTGAGAAAAACTTTTTTTCTTTTTTTTTTTTTTTAAACGGAAACAACACTTTTTATTGATGAAATGAAAAGAGACTATTGCTCGAATTACAAAGAGACTAGATAGCGTGACTAGTGTTGTGTTTGTTATCATTATGTTCACTCATTTATTCTTTTAATGCTTGAGCTTTGAAGCAAGAACCTTGTACTTAAGTTATCAGCTCTGATTTCAGGGGCCAAGAAAGAAGATCCTTCTGGCATTGGAATCAAGAGTATGAATTATGGAAAGTGGCTAGAGTAAGCCCCTCTTTGCGGTGTTTTATTTTATACCAGCTGTGAGACTGCTGCGAACAAGTAGGCCTGTCTTTCTTCCACCAGCCATTGTAACTCTTGTTTCCTTTTTCCCATTCTTTTTTTTTCTTTTTTCTTTTTCCCCTTTGCTTTCTTCCATTTCACTACTCATGTTACTGTAAGGATTGATGTTAAAAGGACCTAAAAAAATGTTTAGCTATTGATGGAAATATGGGATTTAGTAGTAGTGGCAGTGGGTATGTCTTAGCTGAGGTCTCTGCAACTCTTTTTAACACTTCCATGGCCTCCAGCTCTTGTGGTGGTGCCTTTCAGTGCTCAAATATGCTGGACCTGAAATTAGTTTATCAAAAAGCTTCAACTTTCATACATGTTATGCACTGTTATTAGGATATTTGGGTAGTCTTTTTTAATGGAATTTTGAGAAGTGGCAATTTTTTTTCTATTTAAAATTATG

mRNA sequence

AAATGAAGTTAAAAAGCAAAAGATAATAGATACGAATTGGACTGCAATTCATTGGAAGACAAAAAAGTTGGATTTTGCATTCGCAACGAAGGAAAAACAAAAAACAAGAGCTTCTTTGCGACCCCAAAACTGCAGTTCCACCCCCCGCGCTCTCTTCTCTCACTCTCTTTCGATTTCTTCAGCTTTCAATTCATTTTTGAAATCTTTACGAGCACACTTGCTTCAGATTTTGCTTTCCAACACGATTTAGGGTTAGGGTTCAGTTCTTTGTCTCTCTGTAGTTCTAAACATGTATGCTGATCGATTGGAGGCCGATAACCATAGGTCTATAAAGGACCGGCTCAATGGAAACTCTTCTGACCTTTCTGCCCGACGGCGGCCGATTACTGGGAAGAGGCAGAGACAAGATGACAAGTGGGAGCATGATCTCTATGAGGATGATGAACCACAAACTTCAAATCGCAGAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAAAAGTCAACAACAAAGTGGAAATGCATCTTTTTCAGGAGTGCGGGATCTACGTGAAAAGTTGTCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCACCAAAACCAAAATTGGAAGTCACAAAAACACCCCGAAAAAATGATACTGTCGAAGCTCATCCTTCAACCACTCAAAAAAGTGATACATCAGTTGATGACTTCCTACAGTCCTTGGGTCTCGAAAAATATTCAATTACATTTCAAGCAGAGGAAGTTGATATGACAGCGCTTGTACACATGGGAGATGAAGATCTCAAAGCTTTAGGAGTACCAATGGGGCCAAGAAAGAAGATCCTTCTGGCATTGGAATCAAGAGTATGAATTATGGAAAGTGGCTAGAGTAAGCCCCTCTTTGCGGTGTTTTATTTTATACCAGCTGTGAGACTGCTGCGAACAAGTAGGCCTGTCTTTCTTCCACCAGCCATTGTAACTCTTGTTTCCTTTTTCCCATTCTTTTTTTTTCTTTTTTCTTTTTCCCCTTTGCTTTCTTCCATTTCACTACTCATGTTACTGTAAGGATTGATGTTAAAAGGACCTAAAAAAATGTTTAGCTATTGATGGAAATATGGGATTTAGTAGTAGTGGCAGTGGGTATGTCTTAGCTGAGGTCTCTGCAACTCTTTTTAACACTTCCATGGCCTCCAGCTCTTGTGGTGGTGCCTTTCAGTGCTCAAATATGCTGGACCTGAAATTAGTTTATCAAAAAGCTTCAACTTTCATACATGTTATGCACTGTTATTAGGATATTTGGGTAGTCTTTTTTAATGGAATTTTGAGAAGTGGCAATTTTTTTTCTATTTAAAATTATG

Coding sequence (CDS)

ATGTATGCTGATCGATTGGAGGCCGATAACCATAGGTCTATAAAGGACCGGCTCAATGGAAACTCTTCTGACCTTTCTGCCCGACGGCGGCCGATTACTGGGAAGAGGCAGAGACAAGATGACAAGTGGGAGCATGATCTCTATGAGGATGATGAACCACAAACTTCAAATCGCAGAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAAAAGTCAACAACAAAGTGGAAATGCATCTTTTTCAGGAGTGCGGGATCTACGTGAAAAGTTGTCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCACCAAAACCAAAATTGGAAGTCACAAAAACACCCCGAAAAAATGATACTGTCGAAGCTCATCCTTCAACCACTCAAAAAAGTGATACATCAGTTGATGACTTCCTACAGTCCTTGGGTCTCGAAAAATATTCAATTACATTTCAAGCAGAGGAAGTTGATATGACAGCGCTTGTACACATGGGAGATGAAGATCTCAAAGCTTTAGGAGTACCAATGGGGCCAAGAAAGAAGATCCTTCTGGCATTGGAATCAAGAGTATGA

Protein sequence

MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRVGARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKNDTVEAHPSTTQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV

Homology

[Close]

BLAST of Lsi02G020980 vs. ExPASy Swiss-Prot
Match: Q9Y6Y8 (SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.9e-05
Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 131 KSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 190
           K   ++ + L++L L +Y  TF+ E++DM +L+    +DLK +G+P+GPRKKI   +E +
Sbjct: 644 KEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHK 703

[Close]

BLAST of Lsi02G020980 vs. ExPASy Swiss-Prot
Match: Q495M9 (Usher syndrome type-1G protein OS=Homo sapiens OX=9606 GN=USH1G PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.5e-05
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 136 VDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 191
           ++ FL SL +E ++   + E++D+ AL+   D DL+++ VP+GPRKKIL A+  R
Sbjct: 392 LETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKILGAVRRR 446

[Close]

BLAST of Lsi02G020980 vs. ExPASy Swiss-Prot
Match: Q80T11 (Usher syndrome type-1G protein homolog OS=Mus musculus OX=10090 GN=Ush1g PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.3e-05
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 136 VDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 191
           ++ FL SL +E ++   + E++D+ AL+   D DL+++ VP+GPRKKIL A+  R
Sbjct: 392 LETFLASLHMEDFASLLRHEKIDLEALMLCSDLDLRSISVPLGPRKKILGAVRRR 446

[Close]

BLAST of Lsi02G020980 vs. ExPASy Swiss-Prot
Match: Q8N8V4 (Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens OX=9606 GN=ANKS4B PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 9.6e-05
Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 134 TSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 191
           T ++ FL S  LE++   F+ E++D+ AL+   DEDL+++ + +GPRKK+L A+  R
Sbjct: 346 TPLEVFLLSQHLEEFLPIFKREQIDLEALLLCSDEDLQSIQMQLGPRKKVLNAINRR 402

[Close]

BLAST of Lsi02G020980 vs. ExPASy Swiss-Prot
Match: Q6NZC7 (SEC23-interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 140 LQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKI 184
           L++L L  Y  TF+ E++DM +L+    +DLK +G+P+GPRKKI
Sbjct: 649 LEALSLFDYISTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKI 692

[Close]

BLAST of Lsi02G020980 vs. ExPASy TrEMBL
Match: A0A1S3C7G6 (ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103497565 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.8e-92
Identity = 184/205 (89.76%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYE+DEPQTSNRRV
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQKKSQQQSGNA FSGVRDLREKLSGTMKPQAA NDPPKPKLEVTK PRKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKAPRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
            +EAHPSTT              QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 192
           D+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 DDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Lsi02G020980 vs. ExPASy TrEMBL
Match: A0A0A0K9W5 (SAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.1e-91
Identity = 182/205 (88.78%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYE+DEPQTSNRRV
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQKKSQQQSGNA FSGVRDLREKLSGTMKPQAANNDPPKPKLEVTK PRKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKAPRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
            +EAH S+T              QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHTSSTQKAVAKSATRKKAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 192
           D+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 DDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Lsi02G020980 vs. ExPASy TrEMBL
Match: A0A6J1HB30 (ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111461187 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.2e-88
Identity = 176/205 (85.85%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYE+DEPQTSNR+V
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQK+SQQQSGN+SFSG+RDLREKLSGTMKPQA N+DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGIRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           +VEA PSTT              QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 SVEARPSTTQKVVANPATRKKAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 192
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Lsi02G020980 vs. ExPASy TrEMBL
Match: A0A6J1KT08 (ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111497963 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 175/205 (85.37%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYE+DEPQTSNR+V
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQK+SQQQSGN+SFSGVRDLREKLSGTMKPQA N+DPPK KL+V+K  RKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKLKLDVSKPTRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           +VE  PSTT              QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 SVEVRPSTTQKVVANPATRKKDAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 192
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Lsi02G020980 vs. ExPASy TrEMBL
Match: A0A5A7SPS1 (Ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001700 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.2e-84
Identity = 170/191 (89.01%), Postives = 173/191 (90.58%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYE+DEPQTSNRRV
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQKKSQQQSGNA FSGVRDLREKLSGTMKPQAA NDPPKPKLEVTK PRKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKPPRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 178
            +EAHPSTT              QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

[Close]

BLAST of Lsi02G020980 vs. NCBI nr
Match: XP_038899408.1 (ankyrin repeat and SAM domain-containing protein 6 isoform X2 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 187/201 (93.03%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRLEADNHRSIKDRLNGNSSDLSARRR ITGKRQRQDDKWEHDLYEDDEPQTSNRRV
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRTITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGT+KPQAANNDPPKPKLEVTK PRKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTIKPQAANNDPPKPKLEVTKPPRKND 120

Query: 121 TVEAHPSTTQ----------KSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDL 180
           TVEAHPSTTQ          K+DTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDL
Sbjct: 121 TVEAHPSTTQKVVAKPATRKKTDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDL 180

Query: 181 KALGVPMGPRKKILLALESRV 192
           KALGVPMGPRKKILLALESRV
Sbjct: 181 KALGVPMGPRKKILLALESRV 201

[Close]

BLAST of Lsi02G020980 vs. NCBI nr
Match: XP_038899407.1 (ankyrin repeat and SAM domain-containing protein 6 isoform X1 [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 5.3e-93
Identity = 187/205 (91.22%), Postives = 189/205 (92.20%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRLEADNHRSIKDRLNGNSSDLSARRR ITGKRQRQDDKWEHDLYEDDEPQTSNRRV
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRTITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGT+KPQAANNDPPKPKLEVTK PRKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTIKPQAANNDPPKPKLEVTKPPRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           TVEAHPSTT              QK+DTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVEAHPSTTQKVVAKPATRKKVAQKTDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 192
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Lsi02G020980 vs. NCBI nr
Match: XP_008458022.1 (PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 5.9e-92
Identity = 184/205 (89.76%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYE+DEPQTSNRRV
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQKKSQQQSGNA FSGVRDLREKLSGTMKPQAA NDPPKPKLEVTK PRKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKAPRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
            +EAHPSTT              QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 192
           D+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 DDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Lsi02G020980 vs. NCBI nr
Match: XP_004139631.1 (ankyrin repeat and SAM domain-containing protein 6 [Cucumis sativus] >KGN44601.1 hypothetical protein Csa_016265 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 6.5e-91
Identity = 182/205 (88.78%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYE+DEPQTSNRRV
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQKKSQQQSGNA FSGVRDLREKLSGTMKPQAANNDPPKPKLEVTK PRKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKAPRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
            +EAH S+T              QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHTSSTQKAVAKSATRKKAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 192
           D+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 DDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Lsi02G020980 vs. NCBI nr
Match: XP_022960459.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata] >KAG6593004.1 hypothetical protein SDJN03_12480, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.0 bits (855), Expect = 8.8e-88
Identity = 176/205 (85.85%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNRRV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYE+DEPQTSNR+V
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKKSQQQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKTPRKND 120
           GARDLRLKLQK+SQQQSGN+SFSG+RDLREKLSGTMKPQA N+DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGIRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120

Query: 121 TVEAHPSTT--------------QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           +VEA PSTT              QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 SVEARPSTTQKVVANPATRKKAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 192
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Lsi02G020980 vs. TAIR 10
Match: AT3G07170.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 214.5 bits (545), Expect = 7.2e-56
Identity = 119/202 (58.91%), Postives = 148/202 (73.27%), Query Frame = 0


Query: 1   MYADRLEAD--NHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYEDDEPQTSNR 60
           MYAD+LEA+  + + +KDR+NG S D+S R R +TGKRQRQDDKWEHDL+  D+PQ SNR
Sbjct: 1   MYADKLEAESGSRKVVKDRINGGSGDISTRVRQVTGKRQRQDDKWEHDLFSSDKPQLSNR 60

Query: 61  RVGARDLRLKLQKKSQ-QQSGNASFSGVRDLREKLSGTMKPQAANNDPPKPKLE------ 120
           RV  RDLRLKLQK+    QSG  + SGVRDLR++LSGTM  Q  N+DPPK K E      
Sbjct: 61  RVDPRDLRLKLQKRHHGSQSGREAGSGVRDLRDQLSGTMNQQPKNSDPPKSKAEAARPSM 120

Query: 121 ---VTKTPRKNDTVEAHPSTTQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDE 180
               T+T  +  + +A    +Q++D+SVD FL+SLGLEKYS  FQ EEVDM AL+HM D+
Sbjct: 121 KSVATETETRKTSSQATRKKSQQADSSVDSFLESLGLEKYSTAFQVEEVDMDALMHMTDD 180

Query: 181 DLKALGVPMGPRKKILLALESR 191
           DLKA+ +PMGPRKKILLAL S+
Sbjct: 181 DLKAMLIPMGPRKKILLALGSK 202

[Close]

BLAST of Lsi02G020980 vs. TAIR 10
Match: AT5G48680.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 161.4 bits (407), Expect = 7.2e-40
Identity = 108/201 (53.73%), Postives = 134/201 (66.67%), Query Frame = 0


Query: 1   MYADRLEADN--HRSIKDRLNGNSSDLSAR--RRPITGKRQRQ-DDKWEHDLYE-DDEPQ 60
           MY+D + A+    ++ K+RLNG S D S+R  ++ +T KR RQ DDKWEHDL+E DDEP+
Sbjct: 1   MYSDLVVAETKISKTFKNRLNGGSGDFSSRGKQQQVTRKRGRQDDDKWEHDLFEDDDEPR 60

Query: 61  TSNRRVGARDLRLKLQKKSQ-QQSGNASFS-GVRDLREKLSGTMKPQAANN--DPPKPKL 120
            S RRV  +DLRLKLQKK    Q G   FS  V DLR+KLS T+ PQ  N+  +  +P +
Sbjct: 61  LSKRRVDPKDLRLKLQKKRHGSQIGGRVFSVSVADLRDKLSRTVNPQTKNSKREAVRPAI 120

Query: 121 EVTKTPRKNDTVEAHPSTT----QKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           +      K +T  A    T    Q++D SVD FL+SLGLEKYS  FQ EEVDM AL HM 
Sbjct: 121 KKVSVGTKPETRAAPNRATKKDPQQNDASVDSFLESLGLEKYSTAFQVEEVDMDALRHMT 180

Query: 181 DEDLKALGVPMGPRKKILLAL 188
           D+DLKAL +PMGPRKKILLAL
Sbjct: 181 DDDLKALLIPMGPRKKILLAL 201

[Close]

BLAST of Lsi02G020980 vs. TAIR 10
Match: AT1G70180.2 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11
Identity = 42/94 (44.68%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 96  MKPQAANNDPPKPKLEVTKTPRKNDTVEAHPSTTQKSDTSVDDFLQSLGLEKYSITFQAE 155
           M P    N  P P L  ++ P     ++  P +  +   SVD FL S+GL KYS+ F+ E
Sbjct: 366 MLPPPVPNPHPLPPL--SQLPPLGSIMQNSPFSVDE-PLSVDGFLNSIGLGKYSLAFKRE 425

Query: 156 EVDMTALVHMGDEDLKALGVPMGPRKKILLALES 190
           EVDMT +  M + DLK L +PMGPRKKIL A+ S
Sbjct: 426 EVDMTTIKQMKESDLKDLIIPMGPRKKILQAIAS 456

[Close]

BLAST of Lsi02G020980 vs. TAIR 10
Match: AT1G70180.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-06
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 96  MKPQAANNDPPKPKLEVTKTPRKNDTVEAHPSTTQKSDTSVDDFLQSLGLEKYSITFQAE 155
           M P    N  P P L  ++ P     ++  P +  +   SVD FL S+GL KYS+ F+ E
Sbjct: 366 MLPPPVPNPHPLPPL--SQLPPLGSIMQNSPFSVDE-PLSVDGFLNSIGLGKYSLAFKRE 425

Query: 156 EVDMTALVHMGDEDLKALGVPM 178
           EVDMT +  M + DLK L +PM
Sbjct: 426 EVDMTTIKQMKESDLKDLIIPM 444

The following BLAST results are available for this feature:

BLAST of Lsi02G020980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y6Y8	1.9e-05	38.33	SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1	[more]
Q495M9	2.5e-05	41.82	Usher syndrome type-1G protein OS=Homo sapiens OX=9606 GN=USH1G PE=1 SV=1	[more]
Q80T11	4.3e-05	41.82	Usher syndrome type-1G protein homolog OS=Mus musculus OX=10090 GN=Ush1g PE=1 SV...	[more]
Q8N8V4	9.6e-05	40.35	Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens OX=9606 GN=A...	[more]
Q6NZC7	1.6e-04	47.73	SEC23-interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=1 SV=2	[more]

BLAST of Lsi02G020980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7G6	2.8e-92	89.76	ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0K9W5	3.1e-91	88.78	SAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV...	[more]
A0A6J1HB30	4.2e-88	85.85	ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita moschata OX...	[more]
A0A6J1KT08	1.4e-86	85.37	ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita maxima OX=3...	[more]
A0A5A7SPS1	2.2e-84	89.01	Ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Lsi02G020980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899408.1	1.8e-93	93.03	ankyrin repeat and SAM domain-containing protein 6 isoform X2 [Benincasa hispida...	[more]
XP_038899407.1	5.3e-93	91.22	ankyrin repeat and SAM domain-containing protein 6 isoform X1 [Benincasa hispida...	[more]
XP_008458022.1	5.9e-92	89.76	PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis melo]	[more]
XP_004139631.1	6.5e-91	88.78	ankyrin repeat and SAM domain-containing protein 6 [Cucumis sativus] >KGN44601.1...	[more]
XP_022960459.1	8.8e-88	85.85	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata] >KA...	[more]

BLAST of Lsi02G020980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07170.1	7.2e-56	58.91	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G48680.1	7.2e-40	53.73	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G70180.2	2.4e-11	44.68	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G70180.1	2.4e-06	40.24	Sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 128..191 e-value: 8.5E-8 score: 41.9
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 131..188 e-value: 1.4E-15 score: 57.4
IPR001660	Sterile alpha motif domain	PROSITE	PS50105	SAM_DOMAIN	coord: 131..191 score: 10.583908
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 133..191 e-value: 1.9E-25 score: 90.4
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 132..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..61
None	No IPR available	PANTHER	PTHR23509:SF38	OSJNBA0060P14.15 PROTEIN	coord: 128..178 coord: 1..133
None	No IPR available	PANTHER	PTHR23509	PA-PL1 PHOSPHOLIPASE FAMILY	coord: 128..178 coord: 1..133
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 135..188 e-value: 1.72639E-16 score: 68.0349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G020980.1	Lsi02G020980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding