Lsi02G020490 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G020490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	S-protein homolog
Location	chr02: 26652134 .. 26652583 (-)
RNA-Seq Expression	Lsi02G020490
Synteny	Lsi02G020490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGAGGAATGTGGTTGTTTTGTGGCTCGTGATGACGACTTTGGTCGGGGCTCATCAGATTCTTAGGTTGCCATTACCGCCAACAAAGCCTGAAAGGTACTATGTTCACATCATAAATGGGCTAAGCAACGTTGATATGGTTGTGCACTGCCAATCCAAGGACAATGATTTGGGGTATCACCATTTGGTTAATCGTGGAGATGATTACCAATGGAATTTTATCGTGAATGTTTGGGGAACAACCTTGTTTTGGTGCAAATTGGAGAAGCCACATGCGTATGTCTCTTTTGAAAGCTTTTGGCCTGAGTCCAAGAACACTTGGCTCCGTGATAGGTGTGGGAGTCAAGGAACTTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAATAATCCTGCTAAGGTTGATGAGTTTGTTCACAAATGGATCTCTACTAGATAA

mRNA sequence

ATGATGATGAGGAATGTGGTTGTTTTGTGGCTCGTGATGACGACTTTGGTCGGGGCTCATCAGATTCTTAGGTTGCCATTACCGCCAACAAAGCCTGAAAGGTACTATGTTCACATCATAAATGGGCTAAGCAACGTTGATATGGTTGTGCACTGCCAATCCAAGGACAATGATTTGGGGTATCACCATTTGGTTAATCGTGGAGATGATTACCAATGGAATTTTATCGTGAATGTTTGGGGAACAACCTTGTTTTGGTGCAAATTGGAGAAGCCACATGCGTATGTCTCTTTTGAAAGCTTTTGGCCTGAGTCCAAGAACACTTGGCTCCGTGATAGGTGTGGGAGTCAAGGAACTTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAATAATCCTGCTAAGGTTGATGAGTTTGTTCACAAATGGATCTCTACTAGATAA

Coding sequence (CDS)

ATGATGATGAGGAATGTGGTTGTTTTGTGGCTCGTGATGACGACTTTGGTCGGGGCTCATCAGATTCTTAGGTTGCCATTACCGCCAACAAAGCCTGAAAGGTACTATGTTCACATCATAAATGGGCTAAGCAACGTTGATATGGTTGTGCACTGCCAATCCAAGGACAATGATTTGGGGTATCACCATTTGGTTAATCGTGGAGATGATTACCAATGGAATTTTATCGTGAATGTTTGGGGAACAACCTTGTTTTGGTGCAAATTGGAGAAGCCACATGCGTATGTCTCTTTTGAAAGCTTTTGGCCTGAGTCCAAGAACACTTGGCTCCGTGATAGGTGTGGGAGTCAAGGAACTTGTATTTGGACCGCTAAAGATGATGGAATTTACTTGAGAAATAATCCTGCTAAGGTTGATGAGTTTGTTCACAAATGGATCTCTACTAGATAA

Protein sequence

MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWISTR

Homology

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BLAST of Lsi02G020490 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 31  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKL 90
           K   + V ++NGL+  + + +HC+SK++DLG  +L  R + + WNF  N+  +T FWC +
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLHSTFFWCYM 96

Query: 91  EKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKW 146
            K + +++   FW +     L  RCG +  CIWTAK DG+YL N+ +  D    KW
Sbjct: 97  NKDNGHMNVNVFWDD---VILFHRCGWK-NCIWTAKTDGLYLWNSASGEDVLSRKW 147

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BLAST of Lsi02G020490 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-16
Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 31  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKL 90
           K   + V + NGL+  + + +HC+SK+NDLG  +L    D + WNF  N+  +TLFWC +
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCYM 96

Query: 91  EKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWIS 148
            K   +++ + FW +     L  RC  +  C+WTAK+DG+YL N+    D    KW S
Sbjct: 97  SKDDGHMNVKVFWDD---VILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

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BLAST of Lsi02G020490 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 38/141 (26.95%), Postives = 71/141 (50.35%), Query Frame = 0


Query: 7   VVLWLVMTTLVGAHQILR-LPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLV 66
           +++++V+ +L+G   +     + P K     V I N  ++  + VHC+S+D+D G+ H++
Sbjct: 3   IIIFIVLISLIGCETLQHDGKVFPMKGPLTRVVIYND-NDYLLGVHCKSRDDDHGF-HIL 62

Query: 67  NRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAK 126
            +G  Y W F VN   +TL++C   +          +   +++    RC +   C W AK
Sbjct: 63  QKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKAVRDS---SRCRN---CTWEAK 122

Query: 127 DDGIYLRNNPAKVDEFVHKWI 147
           +DGIY      K +   +KW+
Sbjct: 123 EDGIYGYGEIPKKNPLFYKWL 135

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BLAST of Lsi02G020490 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.5e-08
Identity = 32/86 (37.21%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 50  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWP-ESKNT 109
           VHC+SK+ND+G  +L   G+   ++F  N WGTT FWC L K   Y  +      ++   
Sbjct: 42  VHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAIGL 101

Query: 110 WLRDRCGSQGTCIWTAKDDGIYLRNN 135
           + +D  GS     W A+DDGIY   +
Sbjct: 102 FAKD--GSSYN--WLARDDGIYFHKD 122

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BLAST of Lsi02G020490 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.3e-06
Identity = 25/81 (30.86%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 50  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTW 109
           +HC+S+D+DLG+ H++ +G+ + W F VN   +TL++C   +          +  +++ +
Sbjct: 60  IHCKSRDDDLGF-HILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRDFY 119

Query: 110 LRDRCGSQGTCIWTAKDDGIY 131
              RC +   C W A+ DGIY
Sbjct: 120 ---RCAN---CTWKAEKDGIY 133

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BLAST of Lsi02G020490 vs. ExPASy TrEMBL
Match: A0A5A7SNG3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11658G00010 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.4e-62
Identity = 108/145 (74.48%), Postives = 123/145 (84.83%), Query Frame = 0


Query: 5   NVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHL 64
           NV+VL LVM   V A ++LR+ LPP    RYY+H++NGLSN D++VHCQSKD+DLGYHHL
Sbjct: 8   NVIVLGLVMVVFVKA-RVLRMTLPPPSVTRYYIHVMNGLSNADLIVHCQSKDDDLGYHHL 67

Query: 65  VNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTA 124
            NRGDDYQWNF  N W TTLFWCKLEK +A+VSFESFWPESK+TWLRDRCG QGTCIWTA
Sbjct: 68  ANRGDDYQWNFKENFWQTTLFWCKLEKQNAHVSFESFWPESKSTWLRDRCGYQGTCIWTA 127

Query: 125 KDDGIYLRNNPAKVDEFVHKWISTR 150
           KDDGIYLRN PA +DEFVHKWI T+
Sbjct: 128 KDDGIYLRNMPANIDEFVHKWIPTK 151

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BLAST of Lsi02G020490 vs. ExPASy TrEMBL
Match: A0A5A7UAS6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00440 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLG 60
           MMMRNVVVLWL    LV   ++ +   PP KP RY+VH++NGLS   + VHCQSK++DLG
Sbjct: 1   MMMRNVVVLWLATMVLVEG-EVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLG 60

Query: 61  YHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTC 120
           YHHLVNRGD+YQWNF  N+WGTTLFWC+LEKP AYV+FESFWPE+KN WLRDRCG+QGTC
Sbjct: 61  YHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTC 120

Query: 121 IWTAKDDGIYLRNNPAKVDEFVHKWI 147
           IWTAKDDGIYLRN P  VDEFVHKWI
Sbjct: 121 IWTAKDDGIYLRNMPTNVDEFVHKWI 145

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BLAST of Lsi02G020490 vs. ExPASy TrEMBL
Match: A0A1S3C8C8 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103497646 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 98/129 (75.97%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 21  QILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVW 80
           ++LR+ LPP    RYY+H++NGLSN D++VHCQSKD+DLGYHHL NRGDDYQWNF  N W
Sbjct: 8   RVLRMTLPPPSVTRYYIHVMNGLSNADLIVHCQSKDDDLGYHHLANRGDDYQWNFKENFW 67

Query: 81  GTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDE 140
            TTLFWCKLEK + +VSFESFWPESK+TWLRDRCG QGTCIWTAKDDGIYLRN PA +DE
Sbjct: 68  QTTLFWCKLEKQNVHVSFESFWPESKSTWLRDRCGYQGTCIWTAKDDGIYLRNMPANIDE 127

Query: 141 FVHKWISTR 150
           FVHKWI T+
Sbjct: 128 FVHKWIPTK 136

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BLAST of Lsi02G020490 vs. ExPASy TrEMBL
Match: A0A5D3DIG9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00380 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.7e-58
Identity = 103/146 (70.55%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 1   MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLG 60
           MMMRNVVVLWL M  LV   Q+ +   PP  P RY+VH++NGLS   + VHCQSKD+DLG
Sbjct: 1   MMMRNVVVLWLAMMVLVEG-QVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLG 60

Query: 61  YHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTC 120
           YH LV +GD++QWNF  N WGTTLFWC+LEKP AYV+FESFWPE+KN WLR RCG+QGTC
Sbjct: 61  YHRLVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTC 120

Query: 121 IWTAKDDGIYLRNNPAKVDEFVHKWI 147
           IWTAKDDGIYLRN P   DEFVHKWI
Sbjct: 121 IWTAKDDGIYLRNMPTNADEFVHKWI 145

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BLAST of Lsi02G020490 vs. ExPASy TrEMBL
Match: A0A1S4E5F6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503421 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.7e-58
Identity = 103/146 (70.55%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 1   MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLG 60
           MMMRNVVVLWL M  LV   Q+ +   PP  P RY+VH++NGLS   + VHCQSKD+DLG
Sbjct: 1   MMMRNVVVLWLAMMVLVEG-QVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLG 60

Query: 61  YHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTC 120
           YH LV +GD++QWNF  N WGTTLFWC+LEKP AYV+FESFWPE+KN WLR RCG+QGTC
Sbjct: 61  YHRLVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTC 120

Query: 121 IWTAKDDGIYLRNNPAKVDEFVHKWI 147
           IWTAKDDGIYLRN P   DEFVHKWI
Sbjct: 121 IWTAKDDGIYLRNMPTNADEFVHKWI 145

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BLAST of Lsi02G020490 vs. NCBI nr
Match: XP_038896433.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 268.5 bits (685), Expect = 3.5e-68
Identity = 119/149 (79.87%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLG 60
           +  RNV+ LWL+   LVGA QILRL LPP    RYY+HI+NGLS  DMVVHCQSKD+DLG
Sbjct: 2   IQFRNVLFLWLITAALVGADQILRLTLPPPAVSRYYIHIVNGLSKFDMVVHCQSKDDDLG 61

Query: 61  YHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTC 120
           YHHLVN GDDYQWNF VN W TTLFWCKLEKP AYVSFE FWPESK+TWLRDRCG+QGTC
Sbjct: 62  YHHLVNHGDDYQWNFNVNFWETTLFWCKLEKPDAYVSFEVFWPESKSTWLRDRCGTQGTC 121

Query: 121 IWTAKDDGIYLRNNPAKVDEFVHKWISTR 150
           IWTAKDDGIYLRN PA VDEFVHKWISTR
Sbjct: 122 IWTAKDDGIYLRNMPANVDEFVHKWISTR 150

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BLAST of Lsi02G020490 vs. NCBI nr
Match: XP_038896423.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 1.8e-67
Identity = 120/147 (81.63%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 3   MRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYH 62
           MRNVVVLWL    LVGA QI R  +PP +P RYYVH++NGLSN DMVVHCQSKD+DLGYH
Sbjct: 1   MRNVVVLWLATAALVGA-QIPRWSVPPPQPSRYYVHVVNGLSNADMVVHCQSKDDDLGYH 60

Query: 63  HLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPES-KNTWLRDRCGSQGTCI 122
           HLVNRGDDYQWNF  N WGTTLFWCKLEKP+AYVSFESFWPES KNTWLRDRCG+QGTCI
Sbjct: 61  HLVNRGDDYQWNFKENFWGTTLFWCKLEKPNAYVSFESFWPESFKNTWLRDRCGTQGTCI 120

Query: 123 WTAKDDGIYLRNNPAKVDEFVHKWIST 149
           WTAKDDGIYLRN P  VDEFVHKW+ T
Sbjct: 121 WTAKDDGIYLRNMPINVDEFVHKWLPT 146

[Close]

BLAST of Lsi02G020490 vs. NCBI nr
Match: XP_004139726.1 (S-protein homolog 74-like [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 4.5e-63
Identity = 108/145 (74.48%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 2   MMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGY 61
           M+RNVVV W     LVGA +I R P  P  P RYYVH++NGLSN D+ VHCQSKDNDLGY
Sbjct: 1   MIRNVVVFWFATLALVGADRIPRTPFVPVNPARYYVHVVNGLSNYDLGVHCQSKDNDLGY 60

Query: 62  HHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCI 121
            HL+NRGDD+QWNF VN++GTTLFWCKLEK  AYVSFESFWPES+N WLRDRCG QG CI
Sbjct: 61  QHLINRGDDFQWNFKVNIFGTTLFWCKLEKQDAYVSFESFWPESRNFWLRDRCGPQGNCI 120

Query: 122 WTAKDDGIYLRNNPAKVDEFVHKWI 147
           WTAKDDGIYLRNNP  VDE+VHKW+
Sbjct: 121 WTAKDDGIYLRNNPTNVDEYVHKWM 145

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BLAST of Lsi02G020490 vs. NCBI nr
Match: KAA0026247.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK04330.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 4.9e-62
Identity = 108/145 (74.48%), Postives = 123/145 (84.83%), Query Frame = 0


Query: 5   NVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLGYHHL 64
           NV+VL LVM   V A ++LR+ LPP    RYY+H++NGLSN D++VHCQSKD+DLGYHHL
Sbjct: 8   NVIVLGLVMVVFVKA-RVLRMTLPPPSVTRYYIHVMNGLSNADLIVHCQSKDDDLGYHHL 67

Query: 65  VNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTA 124
            NRGDDYQWNF  N W TTLFWCKLEK +A+VSFESFWPESK+TWLRDRCG QGTCIWTA
Sbjct: 68  ANRGDDYQWNFKENFWQTTLFWCKLEKQNAHVSFESFWPESKSTWLRDRCGYQGTCIWTA 127

Query: 125 KDDGIYLRNNPAKVDEFVHKWISTR 150
           KDDGIYLRN PA +DEFVHKWI T+
Sbjct: 128 KDDGIYLRNMPANIDEFVHKWIPTK 151

[Close]

BLAST of Lsi02G020490 vs. NCBI nr
Match: KAA0050661.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07770.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 5.5e-61
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MMMRNVVVLWLVMTTLVGAHQILRLPLPPTKPERYYVHIINGLSNVDMVVHCQSKDNDLG 60
           MMMRNVVVLWL    LV   ++ +   PP KP RY+VH++NGLS   + VHCQSK++DLG
Sbjct: 1   MMMRNVVVLWLATMVLVEG-EVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLG 60

Query: 61  YHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKPHAYVSFESFWPESKNTWLRDRCGSQGTC 120
           YHHLVNRGD+YQWNF  N+WGTTLFWC+LEKP AYV+FESFWPE+KN WLRDRCG+QGTC
Sbjct: 61  YHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTC 120

Query: 121 IWTAKDDGIYLRNNPAKVDEFVHKWI 147
           IWTAKDDGIYLRN P  VDEFVHKWI
Sbjct: 121 IWTAKDDGIYLRNMPTNVDEFVHKWI 145

[Close]

BLAST of Lsi02G020490 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 31  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKL 90
           K   + V ++NGL+  + + +HC+SK++DLG  +L  R + + WNF  N+  +T FWC +
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLHSTFFWCYM 96

Query: 91  EKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKW 146
            K + +++   FW +     L  RCG +  CIWTAK DG+YL N+ +  D    KW
Sbjct: 97  NKDNGHMNVNVFWDD---VILFHRCGWK-NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Lsi02G020490 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.1 bits (209), Expect = 5.2e-17
Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 31  KPERYYVHIINGLSNVD-MVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKL 90
           K   + V + NGL+  + + +HC+SK+NDLG  +L    D + WNF  N+  +TLFWC +
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCYM 96

Query: 91  EKPHAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKWIS 148
            K   +++ + FW +     L  RC  +  C+WTAK+DG+YL N+    D    KW S
Sbjct: 97  SKDDGHMNVKVFWDD---VILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of Lsi02G020490 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.5 bits (158), Expect = 4.2e-11
Identity = 39/113 (34.51%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 37  VHIINGL----SNVDMVVHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLEKP 96
           +HI N L     + D+ V C+S   D+G H+ V  G  YQ++   N W TTLFWC     
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMGKHY-VKYGKIYQFDIRDNFWKTTLFWCTFRHG 85

Query: 97  HAYVSFESFWPESKNTWLRDRCGSQGTCIWTAKDDGIYLRNNPAKVDEFVHKW 146
             Y + + F         +      GT  WTA++DGIY R N   + + VH W
Sbjct: 86  PDYRTGQQFDVYE----YKPGVAQGGTYEWTAREDGIYFRLNQGTIHK-VHNW 132

[Close]

BLAST of Lsi02G020490 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 31/87 (35.63%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 50  VHCQSKDNDLGYHHLVNRGDDYQWNFIVNVWGTTLFWCKLE-----KPHA-YVSFESFWP 109
           VHC+SKD+DLG  H++  G DY++ F  N+W TT F C+++     K H  +V++E+ W 
Sbjct: 43  VHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSWS 102

Query: 110 ESKNTWLRDRCGSQGTCIWTAKDDGIY 131
           ++           + +C W  ++DGIY
Sbjct: 103 KA----------LEASCKWIGREDGIY 118

[Close]

BLAST of Lsi02G020490 vs. TAIR 10
Match: AT3G24060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 58.9 bits (141), Expect = 4.0e-09
Identity = 40/141 (28.37%), Postives = 65/141 (46.10%), Query Frame = 0


Query: 1   MMMRNVVVLWLVMTTLVGAHQILRLPLPPTK---PERYYVHIINGL---SNVDMVVHCQS 60
           M  R  ++L L M   +    I  L L P      E + V +IN     S++ +V+ C S
Sbjct: 1   MNTRKTIILLLFMLIAISLTIIFTLMLQPQTMFLGEEFDVRVINSFRDNSSLPLVIWCTS 60

Query: 61  KDNDLGYHHLVNRGDDYQWNFIVNVWG-TTLFWCKLEKPHAYVSFESFWPESKNTWLRDR 120
              DLG   L   GDD++W   +++W     + C ++       FE+F    K +   +R
Sbjct: 61  PQGDLGGRAL-QEGDDFEWTAKIDLWSWMAEYTCTMKWDSKRKQFEAF----KVSRDSNR 120

Query: 121 CGSQGTCIWTAKDDGIYLRNN 135
           CGS   C W+ ++DG Y  ++
Sbjct: 121 CGSTKKCSWSVREDGFYFSSD 136

The following BLAST results are available for this feature:

BLAST of Lsi02G020490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.9e-16	37.07	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	7.3e-16	37.29	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F2Q9V4	3.9e-09	26.95	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q9LW22	9.5e-08	37.21	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
P0DN92	2.3e-06	30.86	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]

BLAST of Lsi02G020490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNG3	2.4e-62	74.48	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11658G...	[more]
A0A5A7UAS6	2.6e-61	73.29	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A1S3C8C8	1.4e-59	75.97	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103497646 PE=3 SV=1	[more]
A0A5D3DIG9	2.7e-58	70.55	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00...	[more]
A0A1S4E5F6	2.7e-58	70.55	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503421 PE=3 SV=1	[more]

BLAST of Lsi02G020490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896433.1	3.5e-68	79.87	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_038896423.1	1.8e-67	81.63	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_004139726.1	4.5e-63	74.48	S-protein homolog 74-like [Cucumis sativus]	[more]
KAA0026247.1	4.9e-62	74.48	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK04330.1 pumilio-like...	[more]
KAA0050661.1	5.5e-61	73.29	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07770.1 pumilio-like...	[more]

BLAST of Lsi02G020490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.4e-17	37.07	S-protein homologue 1	[more]
AT4G29035.1	5.2e-17	37.29	Plant self-incompatibility protein S1 family	[more]
AT1G28305.1	4.2e-11	34.51	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	1.6e-10	35.63	Plant self-incompatibility protein S1 family	[more]
AT3G24060.1	4.0e-09	28.37	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 37..145 e-value: 1.7E-24 score: 86.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 32..147
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 32..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G020490.1	Lsi02G020490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane