Lsi02G020070 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G020070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	tracheary element differentiation-related 7
Location	chr02: 26019471 .. 26019926 (+)
RNA-Seq Expression	Lsi02G020070
Synteny	Lsi02G020070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCGGAAAATGGTTCGAATCTCGCTCGCATCTCTCCGCCTCCGCCGTTTAAGCCATCCCCATTGCCGCCACCGCCATCACCCGACGGTCACACAGCAATCATCGTAATCGTTTTCATTTCCTTAGGCTCTTGTCTTTTCTTCGTCGTTTTCATTGCAGCTGCCGTTTGTTGTTTTATCAAAAAGAGAAAGAAGAAGTCATCTCCTCAAGAAGTTGCAGAGGCCATCCGTATCGATGGACATCGGAAAGTCCATGAAAATGTTGCGGAGGGCAGCCATGGGCAGAAGGCGGTGATGGTGACGATCGAGGACGATGTCCATATCGACGAAATCGTTAAGAAGAAGGAGCATGGACATGGCCATGGCTTGCATGGTAAGCAACATGAAGGAGGCAGCCATAATAATAATTCTACCACAATGGAAGTAGCAGCTTCTTCTTCTACTACTTCTTGA

mRNA sequence

ATGGCCGCGGAAAATGGTTCGAATCTCGCTCGCATCTCTCCGCCTCCGCCGTTTAAGCCATCCCCATTGCCGCCACCGCCATCACCCGACGGTCACACAGCAATCATCGTAATCGTTTTCATTTCCTTAGGCTCTTGTCTTTTCTTCGTCGTTTTCATTGCAGCTGCCGTTTGTTGTTTTATCAAAAAGAGAAAGAAGAAGTCATCTCCTCAAGAAGTTGCAGAGGCCATCCGTATCGATGGACATCGGAAAGTCCATGAAAATGTTGCGGAGGGCAGCCATGGGCAGAAGGCGGTGATGGTGACGATCGAGGACGATGTCCATATCGACGAAATCGTTAAGAAGAAGGAGCATGGACATGGCCATGGCTTGCATGGTAAGCAACATGAAGGAGGCAGCCATAATAATAATTCTACCACAATGGAAGTAGCAGCTTCTTCTTCTACTACTTCTTGA

Coding sequence (CDS)

ATGGCCGCGGAAAATGGTTCGAATCTCGCTCGCATCTCTCCGCCTCCGCCGTTTAAGCCATCCCCATTGCCGCCACCGCCATCACCCGACGGTCACACAGCAATCATCGTAATCGTTTTCATTTCCTTAGGCTCTTGTCTTTTCTTCGTCGTTTTCATTGCAGCTGCCGTTTGTTGTTTTATCAAAAAGAGAAAGAAGAAGTCATCTCCTCAAGAAGTTGCAGAGGCCATCCGTATCGATGGACATCGGAAAGTCCATGAAAATGTTGCGGAGGGCAGCCATGGGCAGAAGGCGGTGATGGTGACGATCGAGGACGATGTCCATATCGACGAAATCGTTAAGAAGAAGGAGCATGGACATGGCCATGGCTTGCATGGTAAGCAACATGAAGGAGGCAGCCATAATAATAATTCTACCACAATGGAAGTAGCAGCTTCTTCTTCTACTACTTCTTGA

Protein sequence

MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSTTS

Homology

[Close]

BLAST of Lsi02G020070 vs. ExPASy Swiss-Prot
Match: C1PGW1 (Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A OS=Zinnia violacea OX=34245 GN=TED7 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 12  ISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQ 71
           +SPPPP      PPPPSP  H+  IV++F+S G  +FF+ F  AA+ CF+KK+KKK    
Sbjct: 166 LSPPPPHIIP--PPPPSPSNHSTTIVVIFVSCGG-VFFLAFAMAALWCFLKKKKKKM--V 225

Query: 72  EVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE-HGHGHGLH 126
           + AE I  D HRKV E + +G HG +  ++++EDD+HI+E +KK E      GLH
Sbjct: 226 QKAENIHFDEHRKVTERIEQGPHGTETAILSVEDDIHIEEDIKKSELENFRKGLH 275

[Close]

BLAST of Lsi02G020070 vs. ExPASy Swiss-Prot
Match: Q9FI79 (Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7 OS=Arabidopsis thaliana OX=3702 GN=TED7 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15
Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 14  PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEV 73
           PPPP    P PP P+P  H  +I++V ISLGS LFF+ F+AAA+ C++KKR+K S+    
Sbjct: 78  PPPPHVLPPPPPTPAPGHH--VIIVVVISLGS-LFFLAFLAAALFCYLKKRRKSSTK--- 137

Query: 74  AEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE 118
           AE I  D H KV E + +G HG++  +V +E+D+H+ E + K E
Sbjct: 138 AEIIEFDEHLKVQETIVQGPHGEQTRVVMLEEDIHLVEDIHKTE 175

[Close]

BLAST of Lsi02G020070 vs. ExPASy Swiss-Prot
Match: Q8LBX7 (Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6 OS=Arabidopsis thaliana OX=3702 GN=TED6 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.2e-15
Identity = 41/93 (44.09%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 25  PPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRK 84
           P P+PD  T ++V+VF+SLG C+ F+ F+A  +   IKKR +K   +E +EA+R+D H K
Sbjct: 10  PTPTPDHDTTVVVVVFVSLG-CVMFLAFLAFVIWFLIKKRSRKH--RERSEAVRVDEHFK 69

Query: 85  VHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE 118
           + E + EG +GQK+V++++EDDV I++ +K++E
Sbjct: 70  MKEAIVEGPNGQKSVVLSVEDDVKIEDAIKREE 99

[Close]

BLAST of Lsi02G020070 vs. ExPASy Swiss-Prot
Match: C1PGW0 (Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6 OS=Zinnia violacea OX=34245 GN=TED6 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.1e-09
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 34  AIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGS 93
           A I IVF+S G C+F +   A  +CC IKK  K S   E  E + +D H +VHEN+ +G 
Sbjct: 2   ATIFIVFVSFG-CVFVLGIAAFVLCCLIKK-WKCSKAIEKNEMVHVDQHLQVHENILQGP 61

Query: 94  HGQKAVMVTIEDDVHI---DEIVKKKEHG 120
           +G K V +T++DD+H+   +E VK ++ G
Sbjct: 62  NGMKTVAITVDDDLHVHDEEECVKNEKLG 88

[Close]

BLAST of Lsi02G020070 vs. ExPASy TrEMBL
Match: A0A5D3BXC9 (Proline-rich receptor-like protein kinase PERK2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00040 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.5e-67
Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCF 60
           MA EN SNL RI PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFV F+A  VCCF
Sbjct: 1   MAVENSSNLNRIPPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVAFVATVVCCF 60

Query: 61  IKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEHGH 120
           IKKRKKKS PQEV EAIRIDGHRKVHE+VAE  HGQ+A++VTIEDDVHIDEIVKKKEHGH
Sbjct: 61  IKKRKKKSCPQEVVEAIRIDGHRKVHEDVAEVGHGQQAMVVTIEDDVHIDEIVKKKEHGH 120

Query: 121 GHGLHGKQHEGGSHNNNSTTMEVAASSSTTS 152
           GHGLHGKQHEGGSHNNNSTTMEVAASSS+TS
Sbjct: 121 GHGLHGKQHEGGSHNNNSTTMEVAASSSSTS 151

[Close]

BLAST of Lsi02G020070 vs. ExPASy TrEMBL
Match: A0A0A0K4D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G320040 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-66
Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCF 60
           MA EN SNL RI PPPPFKPSPL PPPSPDGHTAIIVIVFISLGSCLFFV F+AAAVCCF
Sbjct: 1   MAVENSSNLPRIPPPPPFKPSPLSPPPSPDGHTAIIVIVFISLGSCLFFVAFVAAAVCCF 60

Query: 61  IKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEHGH 120
           IKKRKKKS PQEV EAI IDGHRKVHE+VAE  HGQ+AV+VTIEDD+HIDEIVKKKEHGH
Sbjct: 61  IKKRKKKSCPQEVVEAIHIDGHRKVHEDVAEVGHGQQAVVVTIEDDLHIDEIVKKKEHGH 120

Query: 121 GHGLHGKQHEGGSHNNNSTTMEVAASSSTTS 152
           GHGLHGKQHEGGSHNNNSTTMEVAASSS+TS
Sbjct: 121 GHGLHGKQHEGGSHNNNSTTMEVAASSSSTS 151

[Close]

BLAST of Lsi02G020070 vs. ExPASy TrEMBL
Match: A0A6J1J036 (uncharacterized protein LOC111480702 OS=Cucurbita maxima OX=3661 GN=LOC111480702 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.4e-41
Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCC 60
           MAA+N SNL RI PPP       PP PSP+GHTA+IVIVFISLGSCL F  F+AAA  CC
Sbjct: 1   MAAQNTSNLGRIPPPP-------PPSPSPNGHTAVIVIVFISLGSCLLFFTFVAAAFFCC 60

Query: 61  FIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEH 120
           FIKKR KK  P+ EVAE IR+DGHRKVHE+VA+ +HG++AV VTIEDDVHIDEI KKKEH
Sbjct: 61  FIKKRNKKPCPRDEVAEVIRVDGHRKVHEDVAQDAHGRQAVTVTIEDDVHIDEIAKKKEH 120

Query: 121 GHGHGLHGKQHEGGSHNNNSTTMEVAASSST 150
            HG GLHGK HEG    +NS+T++V  SSST
Sbjct: 121 RHGFGLHGK-HEG----SNSSTIQVPPSSST 139

[Close]

BLAST of Lsi02G020070 vs. ExPASy TrEMBL
Match: A0A6J1EEE4 (uncharacterized protein LOC111433458 OS=Cucurbita moschata OX=3662 GN=LOC111433458 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.4e-40
Identity = 100/151 (66.23%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCC 60
           MAA+N SNL RIS           PPPSP+GHTA+IVIVFISLGSCL F  F+AAA  CC
Sbjct: 1   MAAQNTSNLGRIS-----------PPPSPNGHTAVIVIVFISLGSCLLFFTFVAAAFFCC 60

Query: 61  FIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEH 120
           FIKKR KK  P+ EVAE I +DGHRKVHE+VA+ +HG++AVMVTIEDDVH+DEI KKKEH
Sbjct: 61  FIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKEH 120

Query: 121 GHGHGLHGKQHEGGSHNNNSTTMEVAASSST 150
            HG GLHGK HEG    +NS+T++V  SSST
Sbjct: 121 RHGFGLHGK-HEG----SNSSTIQVPPSSST 135

[Close]

BLAST of Lsi02G020070 vs. ExPASy TrEMBL
Match: A0A6J1DM43 (uncharacterized protein LOC111021715 OS=Momordica charantia OX=3673 GN=LOC111021715 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.9e-28
Identity = 77/123 (62.60%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 30  DGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSS--PQEVAEAIRIDGHRKVHE 89
           +GH A+IVIVFISLG+C FF   + AA+CCFI K+KKK S   QEVAE I +DGHRK+HE
Sbjct: 5   NGHPAVIVIVFISLGACFFFFALVPAAICCFIIKKKKKKSCGHQEVAEVIHVDGHRKIHE 64

Query: 90  NVA--EGSHGQKAVMVTIEDDVHIDEIVKKKEHGHGHG-LHGKQHEGGSHNNNSTTMEVA 148
             A   G HG +AV+VTIED+V IDE++KKKEHG GHG LHGK   GG    NS++MEVA
Sbjct: 65  AAAGGGGGHGPQAVVVTIEDEVCIDEVMKKKEHGVGHGLLHGKHEVGG----NSSSMEVA 123

[Close]

BLAST of Lsi02G020070 vs. NCBI nr
Match: TYK04341.1 (proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa])

HSP 1 Score: 262.7 bits (670), Expect = 2.0e-66
Identity = 134/151 (88.74%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCF 60
           MA EN SNL RI PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFV F+A  VCCF
Sbjct: 1   MAVENSSNLNRIPPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVAFVATVVCCF 60

Query: 61  IKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEHGH 120
           IKKRKKKS PQEV EAIRIDGHRKVHE+VAE  HGQ+A++VTIEDDVHIDEIVKKKEHGH
Sbjct: 61  IKKRKKKSCPQEVVEAIRIDGHRKVHEDVAEVGHGQQAMVVTIEDDVHIDEIVKKKEHGH 120

Query: 121 GHGLHGKQHEGGSHNNNSTTMEVAASSSTTS 152
           GHGLHGKQHEGGSHNNNSTTMEVAASSS+TS
Sbjct: 121 GHGLHGKQHEGGSHNNNSTTMEVAASSSSTS 151

[Close]

BLAST of Lsi02G020070 vs. NCBI nr
Match: KAE8646200.1 (hypothetical protein Csa_016148 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 5.5e-53
Identity = 109/125 (87.20%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCF 60
           MA EN SNL RI PPPPFKPSPL PPPSPDGHTAIIVIVFISLGSCLFFV F+AAAVCCF
Sbjct: 1   MAVENSSNLPRIPPPPPFKPSPLSPPPSPDGHTAIIVIVFISLGSCLFFVAFVAAAVCCF 60

Query: 61  IKKRKKKSSPQEVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEHGH 120
           IKKRKKKS PQEV EAI IDGHRKVHE+VAE  HGQ+AV+VTIEDD+HIDEIVKKKEHGH
Sbjct: 61  IKKRKKKSCPQEVVEAIHIDGHRKVHEDVAEVGHGQQAVVVTIEDDLHIDEIVKKKEHGH 120

Query: 121 GHGLH 126
           GHGLH
Sbjct: 121 GHGLH 125

[Close]

BLAST of Lsi02G020070 vs. NCBI nr
Match: XP_023521688.1 (uncharacterized protein LOC111785526 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 7.5e-42
Identity = 104/151 (68.87%), Postives = 120/151 (79.47%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCC 60
           MAA+N SNLARISPPP       PP PSP+GHTA+IVIVFISLGSCL F  F+AAA  CC
Sbjct: 1   MAAQNTSNLARISPPP-------PPSPSPNGHTAVIVIVFISLGSCLLFFTFVAAAFFCC 60

Query: 61  FIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEH 120
           FIKKR KK  P+ +VAE I +DGHRKVHE+VA+ +HG++AVMVTIEDDVHIDEI KKKEH
Sbjct: 61  FIKKRNKKPCPRDQVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHIDEIAKKKEH 120

Query: 121 GHGHGLHGKQHEGGSHNNNSTTMEVAASSST 150
            HG GLHGK HEG    +NS+T++V  SSST
Sbjct: 121 RHGFGLHGK-HEG----SNSSTIQVPPSSST 139

[Close]

BLAST of Lsi02G020070 vs. NCBI nr
Match: KAG6607661.1 (Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.6 bits (457), Expect = 9.8e-42
Identity = 104/151 (68.87%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCC 60
           MAA+N SNL RISPPP       PP PSP+GHTA+IVIVFISLGSCL F  F+AAA  CC
Sbjct: 1   MAAQNTSNLGRISPPP-------PPSPSPNGHTAVIVIVFISLGSCLLFFTFVAAAFFCC 60

Query: 61  FIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEH 120
           FIKKR KK  P+ EVAE I +DGHRKVHE+VA+ +HG++AVMVTIEDDVHIDEI KKKEH
Sbjct: 61  FIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHIDEIAKKKEH 120

Query: 121 GHGHGLHGKQHEGGSHNNNSTTMEVAASSST 150
            HG GLHGK HEG    +NS+T++V  SSST
Sbjct: 121 RHGFGLHGK-HEG----SNSSTIQVPPSSST 139

[Close]

BLAST of Lsi02G020070 vs. NCBI nr
Match: XP_022981645.1 (uncharacterized protein LOC111480702 [Cucurbita maxima])

HSP 1 Score: 178.3 bits (451), Expect = 4.9e-41
Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = 0


Query: 1   MAAENGSNLARISPPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAA-VCC 60
           MAA+N SNL RI PPP       PP PSP+GHTA+IVIVFISLGSCL F  F+AAA  CC
Sbjct: 1   MAAQNTSNLGRIPPPP-------PPSPSPNGHTAVIVIVFISLGSCLLFFTFVAAAFFCC 60

Query: 61  FIKKRKKKSSPQ-EVAEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKEH 120
           FIKKR KK  P+ EVAE IR+DGHRKVHE+VA+ +HG++AV VTIEDDVHIDEI KKKEH
Sbjct: 61  FIKKRNKKPCPRDEVAEVIRVDGHRKVHEDVAQDAHGRQAVTVTIEDDVHIDEIAKKKEH 120

Query: 121 GHGHGLHGKQHEGGSHNNNSTTMEVAASSST 150
            HG GLHGK HEG    +NS+T++V  SSST
Sbjct: 121 RHGFGLHGK-HEG----SNSSTIQVPPSSST 139

[Close]

BLAST of Lsi02G020070 vs. TAIR 10
Match: AT5G48920.1 (tracheary element differentiation-related 7 )

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 14  PPPPFKPSPLPPPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEV 73
           PPPP    P PP P+P  H  +I++V ISLGS LFF+ F+AAA+ C++KKR+K S+    
Sbjct: 78  PPPPHVLPPPPPTPAPGHH--VIIVVVISLGS-LFFLAFLAAALFCYLKKRRKSSTK--- 137

Query: 74  AEAIRIDGHRKVHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE 118
           AE I  D H KV E + +G HG++  +V +E+D+H+ E + K E
Sbjct: 138 AEIIEFDEHLKVQETIVQGPHGEQTRVVMLEEDIHLVEDIHKTE 175

[Close]

BLAST of Lsi02G020070 vs. TAIR 10
Match: AT1G43790.1 (tracheary element differentiation-related 6 )

HSP 1 Score: 82.0 bits (201), Expect = 4.4e-16
Identity = 41/93 (44.09%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 25  PPPSPDGHTAIIVIVFISLGSCLFFVVFIAAAVCCFIKKRKKKSSPQEVAEAIRIDGHRK 84
           P P+PD  T ++V+VF+SLG C+ F+ F+A  +   IKKR +K   +E +EA+R+D H K
Sbjct: 10  PTPTPDHDTTVVVVVFVSLG-CVMFLAFLAFVIWFLIKKRSRKH--RERSEAVRVDEHFK 69

Query: 85  VHENVAEGSHGQKAVMVTIEDDVHIDEIVKKKE 118
           + E + EG +GQK+V++++EDDV I++ +K++E
Sbjct: 70  MKEAIVEGPNGQKSVVLSVEDDVKIEDAIKREE 99

The following BLAST results are available for this feature:

BLAST of Lsi02G020070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C1PGW1	1.0e-17	46.09	Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A OS=Zinnia violacea OX=34245...	[more]
Q9FI79	2.1e-15	46.15	Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7 OS=Arabidopsis thaliana OX=3...	[more]
Q8LBX7	6.2e-15	44.09	Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6 OS=Arabidopsis thaliana OX=3...	[more]
C1PGW0	5.1e-09	41.57	Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6 OS=Zinnia violacea OX=34245 ...	[more]

BLAST of Lsi02G020070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXC9	9.5e-67	88.74	Proline-rich receptor-like protein kinase PERK2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0K4D1	2.8e-66	88.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G320040 PE=4 SV=1	[more]
A0A6J1J036	2.4e-41	68.21	uncharacterized protein LOC111480702 OS=Cucurbita maxima OX=3661 GN=LOC111480702...	[more]
A0A6J1EEE4	4.4e-40	66.23	uncharacterized protein LOC111433458 OS=Cucurbita moschata OX=3662 GN=LOC1114334...	[more]
A0A6J1DM43	3.9e-28	62.60	uncharacterized protein LOC111021715 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Lsi02G020070 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04341.1	2.0e-66	88.74	proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]	[more]
KAE8646200.1	5.5e-53	87.20	hypothetical protein Csa_016148 [Cucumis sativus]	[more]
XP_023521688.1	7.5e-42	68.87	uncharacterized protein LOC111785526 [Cucurbita pepo subsp. pepo]	[more]
KAG6607661.1	9.8e-42	68.87	Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6, partial [Cucurbita argyrosp...	[more]
XP_022981645.1	4.9e-41	68.21	uncharacterized protein LOC111480702 [Cucurbita maxima]	[more]

BLAST of Lsi02G020070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48920.1	1.5e-16	46.15	tracheary element differentiation-related 7	[more]
AT1G43790.1	4.4e-16	44.09	tracheary element differentiation-related 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..151
None	No IPR available	PANTHER	PTHR35697:SF1	OS08G0108300 PROTEIN	coord: 12..142
IPR044950	Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6/7	PANTHER	PTHR35697	OS08G0108300 PROTEIN	coord: 12..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G020070.1	Lsi02G020070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity