Lsi02G019450 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G019450
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr02: 25338411 .. 25339324 (-)
RNA-Seq Expression	Lsi02G019450
Synteny	Lsi02G019450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCAATATTTCATACGAACCAGGTGGTAGGTTCTCATTTTCATCTGCATCTTCTTCATCCTTTGATTCGTGTTCTTCAACAGTCATGTTCTGTTCCTTCAAACACTTGCTACTACCGTCCACTTGGGTTGGAAACTCGGGGAGTTTGGTTCCATCACCCTGTTGTGACTGAACACCACCATTATTAGTCCCGGGTCCAGACGCAAAAAGAACCCTGTCGAGCTGCTCCAGCTGCCCGACTGGAGGAACAGCAGCAGACAAGTTATGCTTTGCAGATGGAAGCAGACTACCCGCCGTCGAGATTAACTGAACAATAATTGAAGTTAGATCTGCAGTTATCAGCTGCTGTTGCTGAACTACGAGTTCATCTGGCCTCCCGAAGACTTGGCTCCTCCGACCAACGATCAGATGCACGAGTTCCTGAAGCTGATGAATCTTCTGCTCAAGGAAAGAAAGATTATTTAGCATTGCTCTCAGATCCCAATCTTGAATTTTACTGGCTAGAAGTGCTGCATTCATCTGATTACTATCTTTATCTAGGATTTCAATTTGTTGATTCGGGTTACAGCTTAGGGGGGCCTTCGATTCAGTCCGTTCTTCAAATTCTTGATAAGGTTGTTCCATAGCATAGTCTAAAATGGAAGCATCTGCCCATTTTTGTGCAGGTTGCTGAACATTATTATTAGGAAAAGATGAAGATTTTGTCCAAACTTCAGAGCTACACAAACTATCTTCAGGATCCATCTTTAAAACCTTTTCTCCACCACAAAGATTCAGTACTGTTTGATTTGGATCTGCAACAAGTTCCAAACAAATTCTCAAACTCAGTCAAATGAAGCAAATTTTGGTTCATTCCAGTTGATAAAGTTTTTTGTTTACAGTTTTCAGTTCCTAAGATTCAGCTTCTAAAATCT

mRNA sequence

CTGCAATATTTCATACGAACCAGGTGGTAGGTTCTCATTTTCATCTGCATCTTCTTCATCCTTTGATTCGTGTTCTTCAACAGTCATGTTCTGTTCCTTCAAACACTTGCTACTACCGTCCACTTGGGTTGGAAACTCGGGGAGTTTGTTATCAGCTGCTGTTGCTGAACTACGAGTTCATCTGGCCTCCCGAAGACTTGGCTCCTCCGACCAACGATCAGATGCACGAGTTCCTGAAGCTGATGAATCTTCTGCTCAAGGAAAGAAAGATTATTTAGCATTGCTCTCAGATCCCAATCTTGAATTTTACTGGCTAGAAGTGCTGCATTCATCTGATTACTATCTTTATCTAGGATTTCAATTTGTTGATTCGGGTTACAGCTTAGGGGGGCCTTCGATTCAGTCCGTTCTTCAAATTCTTGATAAGTTTTCAGTTCCTAAGATTCAGCTTCTAAAATCT

Coding sequence (CDS)

ATGTTCTGTTCCTTCAAACACTTGCTACTACCGTCCACTTGGGTTGGAAACTCGGGGAGTTTGTTATCAGCTGCTGTTGCTGAACTACGAGTTCATCTGGCCTCCCGAAGACTTGGCTCCTCCGACCAACGATCAGATGCACGAGTTCCTGAAGCTGATGAATCTTCTGCTCAAGGAAAGAAAGATTATTTAGCATTGCTCTCAGATCCCAATCTTGAATTTTACTGGCTAGAAGTGCTGCATTCATCTGATTACTATCTTTATCTAGGATTTCAATTTGTTGATTCGGGTTACAGCTTAGGGGGGCCTTCGATTCAGTCCGTTCTTCAAATTCTTGATAAGTTTTCAGTTCCTAAGATTCAGCTTCTAAAATCT

Protein sequence

MFCSFKHLLLPSTWVGNSGSLLSAAVAELRVHLASRRLGSSDQRSDARVPEADESSAQGKKDYLALLSDPNLEFYWLEVLHSSDYYLYLGFQFVDSGYSLGGPSIQSVLQILDKFSVPKIQLLKS

Homology

The following BLAST results are available for this feature:

BLAST of Lsi02G019450 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G019450 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G019450 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G019450 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G019450.1	Lsi02G019450.1	mRNA