Lsi02G019430 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G019430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic
Location	chr02: 25329817 .. 25334147 (-)
RNA-Seq Expression	Lsi02G019430
Synteny	Lsi02G019430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTGTTTGTATATTATGCTAGTGAGCTTCAGTTATTGAATTCTGGTTGAAATTTGAGGAATTGGGGAAGGTGATGGCTGGAAATTCGAATTCTATTTTTTGGGTTCTCGTATTTTGGATAGTATTTCAGCAGGGGAACTTCGTTTTGTTCTTGATTTCAATCATAAGTTGTTTTTGAGACGAACCCTTTGTAGATTTCTACCCTGAACTCCCAATTTATTGAAGTATGAAATGAAATTTGCTGGTCCTCAAAGAATTGGAAAAGATGATGAATCTTTGATGGGGTTTGAAATTATTGTTTCAGAGTTTTGATTTTGAGAAAAGCACTTTGTCTGGAAGCGTTTTCTTTAAACTCTTTCCACTAAAGATGCATTAAAGTGTTTTTAGGATTTTCAAAGTTCCTTTTGATTGTAATTGAAAAGTGTTATTAATCGGTTAAAAGGCTTACCATACTCACGCTTGGAACTTTTAAGAATTTGTTGGGTCTTGAACATGACTGTGTTTATTTGTGTACGTTTAAGTATAAAACTGATCTTTTGGTCTTGATATGTTTCGAGTTTTTAGTGAAATTTGTTCTGATGCTATGTGATCCATCAAATTAGGTTGTGCATTTTGTAAAAGTCAAATTTCTGAAATCATTTTGTCTGAACAAGTTTGATATTTTAATTGTTTGTTCAATACATAATCTGTTTGGATTCAACAAGAGCCTGAAAATTATTTAATTCTTTGTCTCTTTGTGGCACTTGTTTTTATTTTAGTATCAGATTCCATGTAATATCCTCTTTCTGTTTCTTCAAGCCTGTTCTCTAATTCACCATTTCAATTGCTTTTAATGATGTTTCTTACGTAGGAAATTGTGCATCATTTTGACGTACCAATTTTGCGGAACGTTAGAAAGGGCTGTAGACTTAATGTTGGGAGGTTTTCTAAACTTCAGGTATGCATTTGTTCAAAAAGCATCGACTTATTCAGTTCATATTACAGTAACTAATAAAATTGTGATTGTTAAGGTATCTCGTGTCACAAGAATTTCCCACTATTAAAGAACAACCAGCTGTCATATATTGAATCACTGAATTTTTTTAAGCACTTCTCCAAAACCTGCCTTCTTCACTGTTAAAGCCAACTTGTGTCCTCAAATACTTTTCTCAAGACTACTTATACTTACCTCCAAATCGTTTCCCTTCATTATTTGAAAAAATATACCCCTTAATTAGACAATTCCTTTTCTCGTTTGGACCCTCCTATTCCAACACAAAGTGTGGTCCAACCCTTTCTTTCTTACGGGTTACTCGTTTTTTCTTTCGTTGAAGTCCTCTGGGCCCATCAGGCCTACACTATCAACACCAATGCTTTTTCTACTGGCCCCCTCTCCTCCAAACAGCCATCCACTCCCTAGAAATTTGGCAATTCTTCCTTCCTTGAGCCTGTGTATGCACCTTTATTATACATCTCTTTGCCTTTCCTCTACCATATCATTATTCTTAATCCTTTTAATATCCTTATCCAAATTATTTATAACATTCCTACTGAAATACTCCTTAATACACCCCATTCTCTCAGTGTCCAGTGGATGGTGGGGTCCCTTGATTTTATCATCTAATATTGAAGTTTCCTCCTCTTACATGCCATGGGCCTTCCACCCTTTTCTAGTGCCACGTTGCATTGCTTCATTTCTTCCTGCTGCTAGAATTACAATTTCACGAGGAATGAATCTACAGAAGTTCTTTTTACTTCAATACAAGCTTCCAAACAATCTTCCAAATCTTAGGTCTTCTTTGCCCACTGTAAGAGTCTCCCACATCCATCTTCAATGAATCTTAGAACTTCCTCCTTCCCCAAGTTTATGGTTGAAACTCACTTCTATCCACCCTCCAGAACTTGGTAATACCCTGCCACATTCCTCACTTTTGGAATCCTCAATAAATATTAGAAAATCTTCATTGATTTTGCTAATTTTGTTACGATACAAAATGGGCTATATTTAAGAAGTTGTGTACAAATTTTCCATTTTTGAAATTGACTTAAATTTATATGTTCCATAAGGTTATATTTTCCTCCATTGAATTGAAAATTCTTCAAATTGTCTCATTATTAACTTCTGTTTTTTTCCTACACTGGATGAAGGCAGATGTTTCAAAGGGAATTGGCAATGGAATCTCAATCATCGACAATGTTTGAGAGTAATTTGTTCTCTGATTCAACATTCATTATAAGCCAATCATTTTCATTAAGTTTGTGGCTGATATCTTTCAAGTGATCTGTAGGTTATGACTTAAGTTCAAAATATAGACATGTTGATTCACAATTTTATCAATACCTCTTTAAACTAGATTTGATACATAAATTATTAAACTATATTCATATATAGAGTGCAAGATATATCAAACTAGATTCAACACATACCTCATTAAACTAGGTAACTCAGTAATAAGAACAAAGTAATTAAAAGGTAAAGAAATACCGCAAATCTCAAAGTATTTTCGAACCTAAACCAACTAAGCTAATGTCTACCCTTCATCTCCCCCTACATGGAATAATGACTAATATACTAGACTCTTAATACTCCGATAATATTTCTTACCGCTATCATAATGGTACTCCTAACCATCAGCCACAATGGTTTGAAACATTGACCTCTAAGATATTCATGTTATCAACAAAAACAACTCAATTTGAGATTATCACATCCACAGTTTTTAACCTGCACATTGCACTTTATGTTCCCTGAAACTATTCAGAATTTATGAATTTGAGTTTCCTTCCCCTTGTGAACATCGTTGGCCTAATGTTTGTTATTCACTTGAAAGAACTATAATATATACATAAAAAAAATAATTAACTCTTAAATTTATTAATTTAATATTTTTTGTGGTGAATGTTTGAAGAGCATTTTTCATTTTTGCAGATTGTCAACCAGAAAAAGGCCTAGCATTATTTGTATCTGCTTTCTCATCAGGGCAATCTTTATGGCTGGTTTCAGCTGAAGCAGCATTTGCTAGGGAAGACATGAAAACGAATACAGTTTACGAGATTGGGGAGTTATTTGAATTAGGAATACAGCTATCTTATCTATTATTACTATTAGGTCTTCTTGGGGTTGGAACCTTCTTTGTCATACGTCAAGTTCTTGTTCGTAGAGAACTCGATCTTTCTGCTAAAGAACTGCAAGTAAGAGTCCATATTTACAGATCATGTAATTTGATGGGTAAACTGTTAGTTCAAATTTGGCATACCTGTATACTAATTCTCTGAAAACCCCATGGCCATGAACTTATACTGAGCTTTTAAATATGCATTTGAAATCACCCCTTGAAGCAGGTGATTGGCGGAGGACATCGATAGTCTAGCTTTGCTCATGTGATTTCCCTCCGTATTATTTGTTGGACAGGAACAAGTGAGAAGTGGTGATGCCAGTGCTATGGAATATTTTGAACTTGGTGCAGTTATGCTGAGGAGGAAGTTTTATCCTGCTGCCACAAAGTATTTGCTTCAGGCAATTGATAAGTGGGACGGGGACGATCAAGATCTTGCGCAGGTTTGATACTGTCTAGCTCACTGATTTCTGAATCTTAGAATATCAAGAGCATCCTATCATATAGTATAAAATCGATTCTCCGCTTTGCTTTCATTGATCGAAACTGGATGGGTGATTAACATGTAAATGAATCAAGAACATACTTCCTCATGTCTAGCTTTCCAAATTCTATTGTTCTCTTCATCAAGTTTCATATTTTCAGGTGTGTTCTACTTGGAAGCTAGTTATCTTTTTCAGACAAACTGAATTCTGTGTGTTCTCTATCACAATTCATTGAGCAAAATCCCATGAAAAGAAATGGGAGCCAAGCATTAGTTGACTTGTTGAGTAGATTGAGGGTCGATGATCTCATCTTTATTGTTTCTATTGTCTATGTTTACAGGTTTACAACGCACTCGGAGTTAGTTATGTGCGTGACGATAAGCTTGACAAGGGAATTGCCCAGTTTGAAACTGCTGTGAAGCTTCAACCTGGATATGTTACAGCTTGGAACAATCTTGGAGATGCATATGAGAAAAAGAAAGAATACAAGTCAGCTCTGAAAGCTTTCGAAGAAGTTCTTCTTTTCGATCCGAACAACAAGCTTGCTCGGCCAAGACGAGATGCGTTGAAGGAGCGTGTGGAGATGTACAAAGGAGTTCCAGTGAAATCTAAAAACAGATGATGATCATGGCCCTGGTAGCTTTTCTACTGATTTTGTTGAAAATGAGAATTTACATTTATTAATGTATTAGATGAGTATATTAGAGCTATGGATAAAAAGTATCATGATGTTGTGTATGGTAACTT

mRNA sequence

ATGGGTATCAGATTCCATGAAATTGTGCATCATTTTGACGTACCAATTTTGCGGAACGTATGCATTTGTTCAAAAAGCATCGACTTATTCAGTTCATATTACACACTTCTCCAAAACCTGCCTTCTTCACTGTTAAAGCCAACTTGTGTCCTCAAATACTTTTCTCAAGACTACTTATACTTACCTCCAAATCGTTTCCCTTCATTATTTGAAAAAATATACCCCTTAATTAGACAATTCCTTTTCTCGTTTGGACCCTCCTATTCCAACACAAAGTGTGGTCCAACCCTTTCTTTCTTACGGTCCTCTGGGCCCATCAGGCCTACACTATCAACACCAATGCTTTTTCTACTGGCCCCCTCTCCTCCAAACAGCCATCCACTCCCTAGAAATTTGGCAATTCTTCCTTCCTTGAGCCTGTGTATGCACCTTTATTATACATCTCTTTGCCTTTCCTCTACCATATCATTATTCTTAATCCTTTTAATATCCTTATCCAAATTATTTATAACATTCCTACTGAAATACTCCTTAATACACCCCATTCTCTCAGTGTCCAGTGGATGGTGGGGTCCCTTGATTTTATCATCTAATATTGAAGTTTCCTCCTCTTACATGCCATGGGCCTTCCACCCTTTTCTAGTTATATTTTCCTCCATTGAATTGAAAATTCTTCAAATTGTCTCATTATTAACTTCTGTTTTTTTCCTACACTGGATGAAGGCAGATGTTTCAAAGGGAATTGGCAATGGAATCTCAATCATCGACAATACTCTTAATACTCCGATAATATTTCTTACCGCTATCATAATGGTACTCCTAACCATCAGCCACAATGATTGTCAACCAGAAAAAGGCCTAGCATTATTTGTATCTGCTTTCTCATCAGGGCAATCTTTATGGCTGGTTTCAGCTGAAGCAGCATTTGCTAGGGAAGACATGAAAACGAATACAGTTTACGAGATTGGGGAGTTATTTGAATTAGGAATACAGCTATCTTATCTATTATTACTATTAGGTCTTCTTGGGGTTGGAACCTTCTTTGTCATACGTCAAGTTCTTGTTCGTAGAGAACTCGATCTTTCTGCTAAAGAACTGCAAGAACAAGTGAGAAGTGGTGATGCCAGTGCTATGGAATATTTTGAACTTGGTGCAGTTATGCTGAGGAGGAAGTTTTATCCTGCTGCCACAAAGTATTTGCTTCAGGCAATTGATAAGTGGGACGGGGACGATCAAGATCTTGCGCAGGTTTACAACGCACTCGGAGTTAGTTATGTGCGTGACGATAAGCTTGACAAGGGAATTGCCCAGTTTGAAACTGCTGTGAAGCTTCAACCTGGATATGTTACAGCTTGGAACAATCTTGGAGATGCATATGAGAAAAAGAAAGAATACAAGTCAGCTCTGAAAGCTTTCGAAGAAGTTCTTCTTTTCGATCCGAACAACAAGCTTGCTCGGCCAAGACGAGATGCGTTGAAGGAGCGTGTGGAGATGTACAAAGGAGTTCCAGTGAAATCTAAAAACAGATGATGATCATGGCCCTGGTAGCTTTTCTACTGATTTTGTTGAAAATGAGAATTTACATTTATTAATGTATTAGATGAGTATATTAGAGCTATGGATAAAAAGTATCATGATGTTGTGTATGGTAACTT

Coding sequence (CDS)

ATGGGTATCAGATTCCATGAAATTGTGCATCATTTTGACGTACCAATTTTGCGGAACGTATGCATTTGTTCAAAAAGCATCGACTTATTCAGTTCATATTACACACTTCTCCAAAACCTGCCTTCTTCACTGTTAAAGCCAACTTGTGTCCTCAAATACTTTTCTCAAGACTACTTATACTTACCTCCAAATCGTTTCCCTTCATTATTTGAAAAAATATACCCCTTAATTAGACAATTCCTTTTCTCGTTTGGACCCTCCTATTCCAACACAAAGTGTGGTCCAACCCTTTCTTTCTTACGGTCCTCTGGGCCCATCAGGCCTACACTATCAACACCAATGCTTTTTCTACTGGCCCCCTCTCCTCCAAACAGCCATCCACTCCCTAGAAATTTGGCAATTCTTCCTTCCTTGAGCCTGTGTATGCACCTTTATTATACATCTCTTTGCCTTTCCTCTACCATATCATTATTCTTAATCCTTTTAATATCCTTATCCAAATTATTTATAACATTCCTACTGAAATACTCCTTAATACACCCCATTCTCTCAGTGTCCAGTGGATGGTGGGGTCCCTTGATTTTATCATCTAATATTGAAGTTTCCTCCTCTTACATGCCATGGGCCTTCCACCCTTTTCTAGTTATATTTTCCTCCATTGAATTGAAAATTCTTCAAATTGTCTCATTATTAACTTCTGTTTTTTTCCTACACTGGATGAAGGCAGATGTTTCAAAGGGAATTGGCAATGGAATCTCAATCATCGACAATACTCTTAATACTCCGATAATATTTCTTACCGCTATCATAATGGTACTCCTAACCATCAGCCACAATGATTGTCAACCAGAAAAAGGCCTAGCATTATTTGTATCTGCTTTCTCATCAGGGCAATCTTTATGGCTGGTTTCAGCTGAAGCAGCATTTGCTAGGGAAGACATGAAAACGAATACAGTTTACGAGATTGGGGAGTTATTTGAATTAGGAATACAGCTATCTTATCTATTATTACTATTAGGTCTTCTTGGGGTTGGAACCTTCTTTGTCATACGTCAAGTTCTTGTTCGTAGAGAACTCGATCTTTCTGCTAAAGAACTGCAAGAACAAGTGAGAAGTGGTGATGCCAGTGCTATGGAATATTTTGAACTTGGTGCAGTTATGCTGAGGAGGAAGTTTTATCCTGCTGCCACAAAGTATTTGCTTCAGGCAATTGATAAGTGGGACGGGGACGATCAAGATCTTGCGCAGGTTTACAACGCACTCGGAGTTAGTTATGTGCGTGACGATAAGCTTGACAAGGGAATTGCCCAGTTTGAAACTGCTGTGAAGCTTCAACCTGGATATGTTACAGCTTGGAACAATCTTGGAGATGCATATGAGAAAAAGAAAGAATACAAGTCAGCTCTGAAAGCTTTCGAAGAAGTTCTTCTTTTCGATCCGAACAACAAGCTTGCTCGGCCAAGACGAGATGCGTTGAAGGAGCGTGTGGAGATGTACAAAGGAGTTCCAGTGAAATCTAAAAACAGATGA

Protein sequence

MGIRFHEIVHHFDVPILRNVCICSKSIDLFSSYYTLLQNLPSSLLKPTCVLKYFSQDYLYLPPNRFPSLFEKIYPLIRQFLFSFGPSYSNTKCGPTLSFLRSSGPIRPTLSTPMLFLLAPSPPNSHPLPRNLAILPSLSLCMHLYYTSLCLSSTISLFLILLISLSKLFITFLLKYSLIHPILSVSSGWWGPLILSSNIEVSSSYMPWAFHPFLVIFSSIELKILQIVSLLTSVFFLHWMKADVSKGIGNGISIIDNTLNTPIIFLTAIIMVLLTISHNDCQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR

Homology

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BLAST of Lsi02G019430 vs. ExPASy Swiss-Prot
Match: B9DHG0 (Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYG7 PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.5e-92
Identity = 184/228 (80.70%), Postives = 197/228 (86.40%), Query Frame = 0


Query: 285 KGLALFVSAFSSGQSLWLVSA--EAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLGLL 344
           K L +  S F  GQSL +VSA  + A A E +K   +YE+GELFEL IQLSYLLLLLGLL
Sbjct: 74  KKLPIKGSTFLLGQSLLMVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLL 133

Query: 345 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLLQ 404
           GVGTF+VIRQVLVRRELDLSAKELQEQVRSGDASA E FELGAVMLRRKFYPAA K+L Q
Sbjct: 134 GVGTFYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQ 193

Query: 405 AIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKK 464
           AI KWDGDDQDLAQVYNALGVSYVR+DKLDKGIAQFE AVKLQPGYVTAWNNLGDAYEKK
Sbjct: 194 AIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKK 253

Query: 465 KEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKG-VPVKSKNR 510
           KE   AL AFEEVLLFDPNNK+ARPRRDALK+RV++YKG V VKSK R
Sbjct: 254 KELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLYKGVVAVKSKKR 301

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BLAST of Lsi02G019430 vs. ExPASy Swiss-Prot
Match: C0PEY7 (Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Zea mays OX=4577 GN=PYG7 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 9.8e-89
Identity = 172/223 (77.13%), Postives = 189/223 (84.75%), Query Frame = 0


Query: 287 LALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLGLLGVGT 346
           L L  SA       WL +A+ A +    K N VYE+GELFELGIQLSYLL+L+GLLG GT
Sbjct: 99  LLLRFSALPYCTMAWLSTAQLAQSSVGEKLNMVYEVGELFELGIQLSYLLILIGLLGAGT 158

Query: 347 FFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLLQAIDK 406
           FFVIRQVLVRRELDLSAKELQEQVRSGDASA EYFELGAVMLRRKFYPAA KYL QAIDK
Sbjct: 159 FFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAAIKYLQQAIDK 218

Query: 407 WDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYK 466
           WD D+QDLAQVYNALGVSY R++KLDK I QF+ AV+LQPGYVTAWNNLGDAYE++K+ K
Sbjct: 219 WDRDEQDLAQVYNALGVSYKRENKLDKAIQQFQKAVELQPGYVTAWNNLGDAYEQQKDLK 278

Query: 467 SALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           SALKAFEEVLLFDPNNK+ARPR D L+ RV MYKGVPVKS+ R
Sbjct: 279 SALKAFEEVLLFDPNNKVARPRVDDLRPRVSMYKGVPVKSEKR 321

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BLAST of Lsi02G019430 vs. ExPASy Swiss-Prot
Match: O78458 (Uncharacterized protein ycf37 OS=Guillardia theta OX=55529 GN=ycf37 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.9e-16
Identity = 51/173 (29.48%), Postives = 89/173 (51.45%), Query Frame = 0


Query: 325 LFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELG 384
           L+  G+ L  L +L+        F+I Q+  RR  DL    +QE++R+  A   +++ELG
Sbjct: 8   LYVSGLSLILLFILV--------FIISQIWSRRTADLRLVSIQEKIRNAKADGKDFYELG 67

Query: 385 AVMLRRKFYPAATKYLLQAIDKWDGDDQ-DLAQVYNALGVSYVRDDKLDKGIAQFETAVK 444
            + L +K Y  A      A++ W+ DD+  LA +YN +G +Y +  + D  +  +E A+ 
Sbjct: 68  VIFLSKKLYDQAIINFRYALNLWELDDKTGLANLYNTIGFTYTQIAQYDLALFYYEKALL 127

Query: 445 LQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV 497
            +P Y+    N+G  YEK      A   + ++L +D +NK A  + + L  R+
Sbjct: 128 HEPNYLVTLKNIGFIYEKTNNLVKAKDIYLQILKYDVDNKFATDKLNLLTGRL 172

[Close]

BLAST of Lsi02G019430 vs. ExPASy Swiss-Prot
Match: P48277 (Uncharacterized protein ycf37 OS=Cyanophora paradoxa OX=2762 GN=ycf37 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.0e-12
Identity = 43/163 (26.38%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 334 YLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFY 393
           + L++L L+     F+I+++   R LDL    L++++    A+  +Y  L ++ +++K Y
Sbjct: 13  FSLIVLALIS----FLIQEIQKSRFLDLEITRLRKKIYQEKATEKDYNNLASIYIKKKLY 72

Query: 394 PAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWN 453
             A K  L+ ++  + D   LA +YN+LG      ++ +  I  ++ A+   P ++ A  
Sbjct: 73  SQAQKEFLKILENKNLDKSQLALIYNSLGYICSAQEQYELAIEYYKKALFYIPDFILARI 132

Query: 454 NLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV 497
           NL   +E K     A+  ++EVL+FDP N+LA+ +   ++  +
Sbjct: 133 NLARIFELKNLKTEAINMYQEVLIFDPKNQLAKRKLSIIENLI 171

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BLAST of Lsi02G019430 vs. ExPASy Swiss-Prot
Match: F8RP11 (Hsp70-Hsp90 organizing protein OS=Triticum aestivum OX=4565 GN=HOP PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 7.2e-07
Identity = 34/126 (26.98%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 358 ELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQV 417
           E + + K+L++Q       A E  E G  M +++ YP A K+  +AI +   D    A+V
Sbjct: 373 EAEKAKKDLEQQEYYDPKLADEEREKGNEMFKQQKYPEAIKHYNEAIRRNPKD----ARV 432

Query: 418 YNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLL 477
           Y+     Y +   + +G+   E  ++L P +   +   G      KEY+ A++ ++  L 
Sbjct: 433 YSNRAACYTKLGAMPEGLKDAEKCIELDPTFTKGYTRKGAVQFFMKEYEKAMETYQAGLK 492

Query: 478 FDPNNK 484
           +DPNN+
Sbjct: 493 YDPNNQ 494

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BLAST of Lsi02G019430 vs. ExPASy TrEMBL
Match: A0A5A7UZ94 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00310 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 5.0e-120
Identity = 225/230 (97.83%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 280 DCQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLL 339
           +C+P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMKTNTVYEIGELFELGIQLSYLLLLL
Sbjct: 84  NCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTNTVYEIGELFELGIQLSYLLLLL 143

Query: 340 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 399
           GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY
Sbjct: 144 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 203

Query: 400 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 459
           LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY
Sbjct: 204 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 263

Query: 460 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKNR
Sbjct: 264 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKNR 313

[Close]

BLAST of Lsi02G019430 vs. ExPASy TrEMBL
Match: A0A1S3CEI5 (uncharacterized protein ycf37 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500057 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 5.0e-120
Identity = 225/230 (97.83%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 280 DCQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLL 339
           +C+P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMKTNTVYEIGELFELGIQLSYLLLLL
Sbjct: 84  NCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTNTVYEIGELFELGIQLSYLLLLL 143

Query: 340 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 399
           GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY
Sbjct: 144 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 203

Query: 400 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 459
           LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY
Sbjct: 204 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 263

Query: 460 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKNR
Sbjct: 264 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKNR 313

[Close]

BLAST of Lsi02G019430 vs. ExPASy TrEMBL
Match: A0A1S3CET8 (uncharacterized protein ycf37 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500057 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 5.0e-120
Identity = 225/230 (97.83%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 280 DCQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLL 339
           +C+P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMKTNTVYEIGELFELGIQLSYLLLLL
Sbjct: 28  NCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTNTVYEIGELFELGIQLSYLLLLL 87

Query: 340 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 399
           GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY
Sbjct: 88  GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 147

Query: 400 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 459
           LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY
Sbjct: 148 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 207

Query: 460 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKNR
Sbjct: 208 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKNR 257

[Close]

BLAST of Lsi02G019430 vs. ExPASy TrEMBL
Match: A0A0A0K4L3 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G284440 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 7.3e-119
Identity = 223/230 (96.96%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 280 DCQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLL 339
           +CQP+KGLALF+SAFSSGQSLWLVSAEAA A EDMKTNTVYEIGELFELGIQLSYLLLLL
Sbjct: 84  NCQPQKGLALFLSAFSSGQSLWLVSAEAALAGEDMKTNTVYEIGELFELGIQLSYLLLLL 143

Query: 340 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 399
           GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATK+
Sbjct: 144 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKF 203

Query: 400 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 459
           LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY
Sbjct: 204 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 263

Query: 460 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKNR
Sbjct: 264 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKNR 313

[Close]

BLAST of Lsi02G019430 vs. ExPASy TrEMBL
Match: A0A6J1DWQ6 (tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024774 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 3.0e-117
Identity = 218/229 (95.20%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 281 CQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLG 340
           CQPEKGL +FVSAFSSGQ LWL+SAEAAFARED++TN V+EIGELFELGIQLSYLLLLLG
Sbjct: 12  CQPEKGLGVFVSAFSSGQFLWLISAEAAFAREDIRTNAVFEIGELFELGIQLSYLLLLLG 71

Query: 341 LLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYL 400
           LLGVGTFFV+RQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATK+L
Sbjct: 72  LLGVGTFFVVRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKFL 131

Query: 401 LQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYE 460
           LQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGI QFETAVKLQPGYVTAWNNLGDAYE
Sbjct: 132 LQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGITQFETAVKLQPGYVTAWNNLGDAYE 191

Query: 461 KKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           KKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR
Sbjct: 192 KKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 240

[Close]

BLAST of Lsi02G019430 vs. NCBI nr
Match: XP_008461470.1 (PREDICTED: uncharacterized protein ycf37 isoform X2 [Cucumis melo])

HSP 1 Score: 441.4 bits (1134), Expect = 1.0e-119
Identity = 225/230 (97.83%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 280 DCQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLL 339
           +C+P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMKTNTVYEIGELFELGIQLSYLLLLL
Sbjct: 28  NCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTNTVYEIGELFELGIQLSYLLLLL 87

Query: 340 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 399
           GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY
Sbjct: 88  GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 147

Query: 400 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 459
           LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY
Sbjct: 148 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 207

Query: 460 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKNR
Sbjct: 208 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKNR 257

[Close]

BLAST of Lsi02G019430 vs. NCBI nr
Match: XP_008461469.1 (PREDICTED: uncharacterized protein ycf37 isoform X1 [Cucumis melo] >KAA0061283.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa] >TYK09862.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa])

HSP 1 Score: 441.4 bits (1134), Expect = 1.0e-119
Identity = 225/230 (97.83%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 280 DCQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLL 339
           +C+P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMKTNTVYEIGELFELGIQLSYLLLLL
Sbjct: 84  NCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTNTVYEIGELFELGIQLSYLLLLL 143

Query: 340 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 399
           GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY
Sbjct: 144 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 203

Query: 400 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 459
           LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY
Sbjct: 204 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 263

Query: 460 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKNR
Sbjct: 264 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKNR 313

[Close]

BLAST of Lsi02G019430 vs. NCBI nr
Match: XP_038898984.1 (tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 440.3 bits (1131), Expect = 2.3e-119
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 282 QPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLGL 341
           QPEKGLALFVSAFSSGQSLWL+SAEAAFAREDMKTN VYEIGELFELGIQLSYLLLLLGL
Sbjct: 90  QPEKGLALFVSAFSSGQSLWLISAEAAFAREDMKTNAVYEIGELFELGIQLSYLLLLLGL 149

Query: 342 LGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLL 401
           LGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLL
Sbjct: 150 LGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLL 209

Query: 402 QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEK 461
           QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEK
Sbjct: 210 QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEK 269

Query: 462 KKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           KKEYK+ALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR
Sbjct: 270 KKEYKAALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 317

[Close]

BLAST of Lsi02G019430 vs. NCBI nr
Match: XP_038898985.1 (tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 440.3 bits (1131), Expect = 2.3e-119
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 282 QPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLGL 341
           QPEKGLALFVSAFSSGQSLWL+SAEAAFAREDMKTN VYEIGELFELGIQLSYLLLLLGL
Sbjct: 46  QPEKGLALFVSAFSSGQSLWLISAEAAFAREDMKTNAVYEIGELFELGIQLSYLLLLLGL 105

Query: 342 LGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLL 401
           LGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLL
Sbjct: 106 LGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLL 165

Query: 402 QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEK 461
           QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEK
Sbjct: 166 QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEK 225

Query: 462 KKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           KKEYK+ALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR
Sbjct: 226 KKEYKAALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 273

[Close]

BLAST of Lsi02G019430 vs. NCBI nr
Match: XP_011659092.1 (tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X2 [Cucumis sativus] >KAE8646164.1 hypothetical protein Csa_015953 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-118
Identity = 223/230 (96.96%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 280 DCQPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKTNTVYEIGELFELGIQLSYLLLLL 339
           +CQP+KGLALF+SAFSSGQSLWLVSAEAA A EDMKTNTVYEIGELFELGIQLSYLLLLL
Sbjct: 28  NCQPQKGLALFLSAFSSGQSLWLVSAEAALAGEDMKTNTVYEIGELFELGIQLSYLLLLL 87

Query: 340 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKY 399
           GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATK+
Sbjct: 88  GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKF 147

Query: 400 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 459
           LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY
Sbjct: 148 LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAY 207

Query: 460 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 510
           EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKNR
Sbjct: 208 EKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKNR 257

[Close]

BLAST of Lsi02G019430 vs. TAIR 10
Match: AT1G22700.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 340.9 bits (873), Expect = 1.8e-93
Identity = 184/228 (80.70%), Postives = 197/228 (86.40%), Query Frame = 0


Query: 285 KGLALFVSAFSSGQSLWLVSA--EAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLGLL 344
           K L +  S F  GQSL +VSA  + A A E +K   +YE+GELFEL IQLSYLLLLLGLL
Sbjct: 74  KKLPIKGSTFLLGQSLLMVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLL 133

Query: 345 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLLQ 404
           GVGTF+VIRQVLVRRELDLSAKELQEQVRSGDASA E FELGAVMLRRKFYPAA K+L Q
Sbjct: 134 GVGTFYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQ 193

Query: 405 AIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKK 464
           AI KWDGDDQDLAQVYNALGVSYVR+DKLDKGIAQFE AVKLQPGYVTAWNNLGDAYEKK
Sbjct: 194 AIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKK 253

Query: 465 KEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKG-VPVKSKNR 510
           KE   AL AFEEVLLFDPNNK+ARPRRDALK+RV++YKG V VKSK R
Sbjct: 254 KELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLYKGVVAVKSKKR 301

[Close]

BLAST of Lsi02G019430 vs. TAIR 10
Match: AT1G22700.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 340.9 bits (873), Expect = 1.8e-93
Identity = 184/228 (80.70%), Postives = 197/228 (86.40%), Query Frame = 0


Query: 285 KGLALFVSAFSSGQSLWLVSA--EAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLGLL 344
           K L +  S F  GQSL +VSA  + A A E +K   +YE+GELFEL IQLSYLLLLLGLL
Sbjct: 69  KKLPIKGSTFLLGQSLLMVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLL 128

Query: 345 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLLQ 404
           GVGTF+VIRQVLVRRELDLSAKELQEQVRSGDASA E FELGAVMLRRKFYPAA K+L Q
Sbjct: 129 GVGTFYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQ 188

Query: 405 AIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKK 464
           AI KWDGDDQDLAQVYNALGVSYVR+DKLDKGIAQFE AVKLQPGYVTAWNNLGDAYEKK
Sbjct: 189 AIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKK 248

Query: 465 KEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKG-VPVKSKNR 510
           KE   AL AFEEVLLFDPNNK+ARPRRDALK+RV++YKG V VKSK R
Sbjct: 249 KELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLYKGVVAVKSKKR 296

[Close]

BLAST of Lsi02G019430 vs. TAIR 10
Match: AT1G22700.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 332.0 bits (850), Expect = 8.3e-91
Identity = 176/211 (83.41%), Postives = 188/211 (89.10%), Query Frame = 0


Query: 302 LVSA--EAAFAREDMKTNTVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRREL 361
           +VSA  + A A E +K   +YE+GELFEL IQLSYLLLLLGLLGVGTF+VIRQVLVRREL
Sbjct: 1   MVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLLGVGTFYVIRQVLVRREL 60

Query: 362 DLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYN 421
           DLSAKELQEQVRSGDASA E FELGAVMLRRKFYPAA K+L QAI KWDGDDQDLAQVYN
Sbjct: 61  DLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQAIQKWDGDDQDLAQVYN 120

Query: 422 ALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFD 481
           ALGVSYVR+DKLDKGIAQFE AVKLQPGYVTAWNNLGDAYEKKKE   AL AFEEVLLFD
Sbjct: 121 ALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKKKELPLALNAFEEVLLFD 180

Query: 482 PNNKLARPRRDALKERVEMYKG-VPVKSKNR 510
           PNNK+ARPRRDALK+RV++YKG V VKSK R
Sbjct: 181 PNNKVARPRRDALKDRVKLYKGVVAVKSKKR 211

[Close]

BLAST of Lsi02G019430 vs. TAIR 10
Match: AT3G11540.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 7.4e-07
Identity = 28/77 (36.36%), Postives = 38/77 (49.35%), Query Frame = 0


Query: 413 DLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAF 472
           + AQ  N LGV Y    K+D   +  E A+   P Y  A+NNLG  Y        A+ A+
Sbjct: 361 NFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAIDAY 420

Query: 473 EEVLLFDPNNKLARPRR 490
           EE L  DP+++ A   R
Sbjct: 421 EECLKIDPDSRNAGQNR 437

[Close]

BLAST of Lsi02G019430 vs. TAIR 10
Match: AT5G56290.1 (peroxin 5 )

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-05
Identity = 22/67 (32.84%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 415 AQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEE 474
           A V+  LGV Y    + D+ I  F+TA++L+P   + WN LG       +   A+ A+++
Sbjct: 590 ADVHIVLGVLYNLSREFDRAITSFQTALQLKPNDYSLWNKLGATQANSVQSADAISAYQQ 649

Query: 475 VLLFDPN 482
            L   PN
Sbjct: 650 ALDLKPN 656

The following BLAST results are available for this feature:

BLAST of Lsi02G019430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DHG0	2.5e-92	80.70	Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Arabid...	[more]
C0PEY7	9.8e-89	77.13	Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Zea ma...	[more]
O78458	2.9e-16	29.48	Uncharacterized protein ycf37 OS=Guillardia theta OX=55529 GN=ycf37 PE=3 SV=1	[more]
P48277	2.0e-12	26.38	Uncharacterized protein ycf37 OS=Cyanophora paradoxa OX=2762 GN=ycf37 PE=3 SV=1	[more]
F8RP11	7.2e-07	26.98	Hsp70-Hsp90 organizing protein OS=Triticum aestivum OX=4565 GN=HOP PE=1 SV=1	[more]

BLAST of Lsi02G019430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZ94	5.0e-120	97.83	Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CEI5	5.0e-120	97.83	uncharacterized protein ycf37 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500057...	[more]
A0A1S3CET8	5.0e-120	97.83	uncharacterized protein ycf37 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500057...	[more]
A0A0A0K4L3	7.3e-119	96.96	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G284440 ...	[more]
A0A6J1DWQ6	3.0e-117	95.20	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Momord...	[more]

BLAST of Lsi02G019430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461470.1	1.0e-119	97.83	PREDICTED: uncharacterized protein ycf37 isoform X2 [Cucumis melo]	[more]
XP_008461469.1	1.0e-119	97.83	PREDICTED: uncharacterized protein ycf37 isoform X1 [Cucumis melo] >KAA0061283.1...	[more]
XP_038898984.1	2.3e-119	98.68	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X...	[more]
XP_038898985.1	2.3e-119	98.68	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X...	[more]
XP_011659092.1	1.5e-118	96.96	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X...	[more]

BLAST of Lsi02G019430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22700.1	1.8e-93	80.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G22700.2	1.8e-93	80.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G22700.3	8.3e-91	83.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G11540.1	7.4e-07	36.36	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G56290.1	2.4e-05	32.84	peroxin 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 415..448 e-value: 0.088 score: 21.9 coord: 449..482 e-value: 1.1E-7 score: 41.5 coord: 377..410 e-value: 360.0 score: 1.3
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 449..482 score: 13.2754
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 415..448 score: 10.6204
None	No IPR available	PFAM	PF13432	TPR_16	coord: 388..447 e-value: 0.003 score: 18.2
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 278..502
None	No IPR available	PANTHER	PTHR26312:SF177	TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN PYG7, CHLOROPLASTIC	coord: 278..502
None	No IPR available	PROSITE	PS50293	TPR_REGION	coord: 449..482 score: 10.170074
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 451..482 e-value: 8.5E-9 score: 34.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 356..502 e-value: 7.7E-23 score: 83.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 376..489

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G019430.1	Lsi02G019430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity