Lsi02G019320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi02G019320
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description40S ribosomal protein S4
Locationchr02: 25252784 .. 25254706 (-)
RNA-Seq ExpressionLsi02G019320
SyntenyLsi02G019320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGTGAGTCAAATTTGTAGTTTCATTTATTTTACGACGTTTTCTTTAGAGTTTATGCATCACCACTTATTTCTACCTCTCAAATCTGTTTGTAGGCCCCCAAACCTTCATCTGGACCTCATAAGTCAAGGGAATGCCTCCCGTTGATCCTTATATTGAGGAACCGATTGAAATATGCTCTCACATATCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGGTATGATTGTTTATCTTCAACTTTGTACCCATACTATTGTTTGAGTTCCAATGTATAATGACCCTTTTACATTAGTGCCTCTGCCACTTTAGGAGATGTTACAAATAACTTGCTAAATTGGTTTTTTTTATTCTTGGAATTGGCTGTTGATTTTATGAACTGGATTAGGGAAGTAATGGAGTGTTAACTCATCATTTCAATCCTTCCATATTGACATTGTCTTCCTTTGGTTCTAGTGCTTCCCATACCCTCCTATTAGGCTATTACTAATGGCTGGTGGGACCCTTGTTGTAAGTTGTATATTGTTTATTTTTGGTGGCTTGAGTGTTAGTTCTCTACCATCATTTTGGTTTAGCATTTTCTTCCCATTATTCTCAGTGGAAGATGCCATTTTTCAATCTATTCTTTTCCTTTTAAAAGTGTTGTATGTAAATGGGAATGGGGGAAATAATAAGGAATGCAACTGTAGCTTTACCTGCCAAATTACCATATCCAAACCAAATAATATTATTGATAATATGTTCCAATGATTTGATTGTCAACTCATGAACATTTCCTGCTTGGAACTGCTTTGTCTCTTTGTTGCTTCATGTTTGTTCTGTTTATTACTTTTGTATATACATTTTAAGCACATCACTCATTTTTGTCTCTCCCTCCTCTTTAGACGTTGTGTCAATTCCCAAGACAAACGAGAATTTTCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGGTCAGCTACTGTTTTTTTGATATTGAACTTTGACCTGTTATTTATTACAATCTTGTTGTATAAAGTGTACTAGATTCAAAGAAAATTAGATGCAAATGCAATTACAAAGAGTTTTTGGCATCAATAGTTACCATAGGGGAGAGGTTTAGCATTTGTGTGGTTGGGATATCGTATTCTAAAATCATTCTGCATTCGTCAGTTTGATTTCTTCAAGTTAGCTGCTCTTTTTAGATTATTATAATGTGACGTTCATGTAGGGAAATAAATCAAAATCCTATAACACTCTGAAGTAACAGGCTGGAGATGCTGGATACTGTTTGTTGTCCATCATATAGTTGGAAAATTCAAGGTTGACTTTTATATTAATTTTTGCAGTATAAGCTGTGCAAAGTTCGGTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATCCGTTATCCCGACCCTCTGATCAAGGCGAATGACACCATCAAGCTGGACCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGGGGCAGGGTCGGAGTGATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACCATTGGCAAAGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAACTATCCATCATCGAAGAAGCCAAGAAGAGGCTGGCAAGCCAAGCCGCAGTTACCGCTTAA

mRNA sequence

GCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCATAAGTCAAGGGAATGCCTCCCGTTGATCCTTATATTGAGGAACCGATTGAAATATGCTCTCACATATCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAGACAAACGAGAATTTTCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGGTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATCCGTTATCCCGACCCTCTGATCAAGGCGAATGACACCATCAAGCTGGACCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGGGGCAGGGTCGGAGTGATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACCATTGGCAAAGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAACTATCCATCATCGAAGAAGCCAAGAAGAGGCTGGCAAGCCAAGCCGCAGTTACCGCTTAA

Coding sequence (CDS)

GCAAGAGGACTGAAGAAGCATTTGAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCATAAGTCAAGGGAATGCCTCCCGTTGATCCTTATATTGAGGAACCGATTGAAATATGCTCTCACATATCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGACGTTGTGTCAATTCCCAAGACAAACGAGAATTTTCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACACTCAGTTAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGGTCAGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGACGCACAATCCGTTATCCCGACCCTCTGATCAAGGCGAATGACACCATCAAGCTGGACCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGGGGCAGGGTCGGAGTGATAAAGAACAGGGAGAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCAACTCGGCTGGGCAATGTGTTCACCATTGGCAAAGGGACTAAGCCATGGGTGTCCCTACCCAAGGGCAAGGGTATTAAACTATCCATCATCGAAGAAGCCAAGAAGAGGCTGGCAAGCCAAGCCGCAGTTACCGCTTAA

Protein sequence

ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLASQAAVTA
Homology
[Close]
BLAST of Lsi02G019320 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 502.3 bits (1292), Expect = 3.4e-141
Identity = 240/260 (92.31%), Postives = 256/260 (98.46%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAA 261
           KGIKL+IIEEA+KRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Lsi02G019320 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 501.9 bits (1291), Expect = 4.4e-141
Identity = 240/260 (92.31%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAA 261
           KGIKL+IIEEA+KRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Lsi02G019320 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 7.5e-141
Identity = 240/263 (91.25%), Postives = 258/263 (98.10%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           I+ILMQR V+VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K+
Sbjct: 62  ISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKL+IIE+A+KRLA+Q+A  A
Sbjct: 242 KGIKLTIIEDARKRLAAQSATPA 264

[Close]
BLAST of Lsi02G019320 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 2.2e-140
Identity = 238/260 (91.54%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAA 261
           KGIKL+IIEEA+KRL++Q A
Sbjct: 242 KGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of Lsi02G019320 vs. ExPASy Swiss-Prot
Match: P46299 (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 9.1e-139
Identity = 240/260 (92.31%), Postives = 252/260 (96.92%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHV+VDGKVRTDKT+PAGFMDVVSIPKTNE+FRLLYDTKGRF LH++  +E K+
Sbjct: 62  IAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK 
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKR 241

Query: 241 KGIKLSIIEEAKKRLASQAA 261
           KGIKLSIIEEA+KRLA+Q A
Sbjct: 242 KGIKLSIIEEARKRLAAQNA 261

[Close]
BLAST of Lsi02G019320 vs. ExPASy TrEMBL
Match: A0A6J1BSY6 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146
Identity = 261/263 (99.24%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Lsi02G019320 vs. ExPASy TrEMBL
Match: A0A5A7V1R9 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00160 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.0e-146
Identity = 260/263 (98.86%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQAAVTA
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]
BLAST of Lsi02G019320 vs. ExPASy TrEMBL
Match: A0A0A0K4K7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.0e-145
Identity = 259/263 (98.48%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Lsi02G019320 vs. ExPASy TrEMBL
Match: A0A6J1D0L7 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.0e-145
Identity = 259/263 (98.48%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KG+KLSIIEEA+KRLASQAAVTA
Sbjct: 242 KGVKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Lsi02G019320 vs. ExPASy TrEMBL
Match: A0A5A7UAW2 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33G00150 PE=3 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.8e-145
Identity = 258/263 (98.10%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Lsi02G019320 vs. NCBI nr
Match: XP_038899765.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 529.6 bits (1363), Expect = 1.5e-146
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Lsi02G019320 vs. NCBI nr
Match: XP_022132117.1 (40S ribosomal protein S4-3 [Momordica charantia])

HSP 1 Score: 528.5 bits (1360), Expect = 3.3e-146
Identity = 261/263 (99.24%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Lsi02G019320 vs. NCBI nr
Match: XP_038900121.1 (40S ribosomal protein S4-3 [Benincasa hispida])

HSP 1 Score: 528.1 bits (1359), Expect = 4.4e-146
Identity = 261/263 (99.24%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]
BLAST of Lsi02G019320 vs. NCBI nr
Match: XP_004150395.3 (40S ribosomal protein S4-3 [Cucumis sativus] >KAE8646159.1 hypothetical protein Csa_016358 [Cucumis sativus])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 260/263 (98.86%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQA VTA
Sbjct: 242 KGIKLSIIEEARKRLASQATVTA 264

[Close]
BLAST of Lsi02G019320 vs. NCBI nr
Match: KAA0061270.1 (40S ribosomal protein S4-3-like [Cucumis melo var. makuwa] >TYK09850.1 40S ribosomal protein S4-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 526.2 bits (1354), Expect = 1.7e-145
Identity = 260/263 (98.86%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 241 KGIKLSIIEEAKKRLASQAAVTA 264
           KGIKLSIIEEA+KRLASQAAVTA
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]
BLAST of Lsi02G019320 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 502.3 bits (1292), Expect = 2.4e-142
Identity = 240/260 (92.31%), Postives = 256/260 (98.46%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAA 261
           KGIKL+IIEEA+KRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Lsi02G019320 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 501.9 bits (1291), Expect = 3.1e-142
Identity = 240/260 (92.31%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAA 261
           KGIKL+IIEEA+KRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]
BLAST of Lsi02G019320 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 499.6 bits (1285), Expect = 1.5e-141
Identity = 238/260 (91.54%), Postives = 255/260 (98.08%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 181 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 240
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 241 KGIKLSIIEEAKKRLASQAA 261
           KGIKL+IIEEA+KRL++Q A
Sbjct: 242 KGIKLTIIEEARKRLSAQQA 261

[Close]
BLAST of Lsi02G019320 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 465.7 bits (1197), Expect = 2.5e-131
Identity = 223/243 (91.77%), Postives = 238/243 (97.94%), Query Frame = 0 

Query: 18  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 77
           MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1   MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60

Query: 78  DKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPY 137
           DKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPY
Sbjct: 61  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120

Query: 138 LNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 197
           LNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180

Query: 198 EKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLAS 257
           EKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEA+KRLAS
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240

Query: 258 QAA 261
           Q A
Sbjct: 241 QQA 243

[Close]
BLAST of Lsi02G019320 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 347.4 bits (890), Expect = 9.8e-96
Identity = 163/180 (90.56%), Postives = 174/180 (96.67%), Query Frame = 0 

Query: 1   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 60
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 61  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 120
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 121 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 180
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKCV 181

The following BLAST results are available for this feature:
BLAST of Lsi02G019320 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VYK63.4e-14192.3140S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2[more]
P492044.4e-14192.3140S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4[more]
P463007.5e-14191.2540S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1[more]
Q93VH92.2e-14091.5440S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1[more]
P462999.1e-13992.3140S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1[more]
BLAST of Lsi02G019320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BSY61.6e-14699.2440S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=... [more]
A0A5A7V1R98.0e-14698.8640S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A0A0K4K71.0e-14598.4840S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1[more]
A0A6J1D0L71.0e-14598.4840S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=... [more]
A0A5A7UAW21.8e-14598.1040S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
BLAST of Lsi02G019320 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899765.11.5e-14699.6240S ribosomal protein S4-3-like [Benincasa hispida][more]
XP_022132117.13.3e-14699.2440S ribosomal protein S4-3 [Momordica charantia][more]
XP_038900121.14.4e-14699.2440S ribosomal protein S4-3 [Benincasa hispida][more]
XP_004150395.31.3e-14598.8640S ribosomal protein S4-3 [Cucumis sativus] >KAE8646159.1 hypothetical protein ... [more]
KAA0061270.11.7e-14598.8640S ribosomal protein S4-3-like [Cucumis melo var. makuwa] >TYK09850.1 40S ribos... [more]
BLAST of Lsi02G019320 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G58420.12.4e-14292.31Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.13.1e-14292.31Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.11.5e-14191.54Ribosomal protein S4 (RPS4A) family protein [more]
AT5G07090.22.5e-13191.77Ribosomal protein S4 (RPS4A) family protein [more]
AT2G17360.29.8e-9690.56Ribosomal protein S4 (RPS4A) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 173..200
e-value: 7.7E-4
score: 28.8
IPR005824KOWPFAMPF00467KOWcoord: 176..209
e-value: 1.3E-6
score: 28.1
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 41..105
e-value: 7.9E-5
score: 32.0
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 46..89
e-value: 8.0E-7
score: 28.7
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 50..111
e-value: 9.72724E-6
score: 40.6958
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 174..244
e-value: 1.7E-39
score: 135.5
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 121..171
e-value: 1.1E-30
score: 107.2
IPR03227740S ribosomal protein S4, C-terminal domainPFAMPF1612140S_S4_Ccoord: 211..257
e-value: 4.6E-26
score: 90.2
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 94..168
e-value: 1.4E-35
score: 121.0
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 2..38
e-value: 4.1E-19
score: 68.4
IPR000876Ribosomal protein S4ePIRSFPIRSF002116RPS4a_RPS4ecoord: 1..240
e-value: 1.2E-97
score: 323.8
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 220..263
coord: 1..219
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 6..237
score: 36.615967
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 1..116
e-value: 1.5E-60
score: 204.3
NoneNo IPR availablePANTHERPTHR11581:SF3340S RIBOSOMAL PROTEIN S4coord: 220..263
NoneNo IPR availablePANTHERPTHR11581:SF3340S RIBOSOMAL PROTEIN S4coord: 1..219
NoneNo IPR availablePROSITEPS50889S4coord: 41..103
score: 9.046091
IPR018199Ribosomal protein S4e, N-terminal, conserved sitePROSITEPS00528RIBOSOMAL_S4Ecoord: 7..21
IPR041982Ribosomal protein S4, KOW domainCDDcd06087KOW_RPS4coord: 174..228
e-value: 8.45845E-31
score: 107.216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G019320.1Lsi02G019320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding