Lsi02G019240 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGTTGGCGCAGGTCATAGCAGAAAGACTGTCTGAAGAAGAAATTGGTGGCTTGAAGGAATTGTTTAAAATGATTGACACCGATAACAGTGGGTCCATAACATTTGAAGAGCTTAAAGCGGGGTTGAAAAAAGTGGGCTCTGAACTCATGGAATCTGATATCAAGTCTCTTATGGATGCGGTAGGTAACTTGTCTGAAACCCTTGTAGAAATATTAACATCATGTTTGAGGCAGTTTGGTTTCGATTTTATATATTTTGGTTAAATTGCTTAGCCTTCCAACTTTATGTTTATATTTGTTTAGTCCTTGATTTTGAAAACGTATGATTTCCTTATTTTAATTTTAATAAATCCCTGTCCTTATTTAAGTGCCTGATATGACATGCTGACTAGTTTAACAATTGATGACATGATACAACGGTGGGTGGGCAAAAGATATTCAATGGAATGGATGTGCAAAATGCATATTAAACATAATTTCCCCCATGCTTGCCCGCCCTTTGTTCAGCTAGCACTCATTTTTTTCTAGCTCATACCACGTTATGCAAAATCATTGCGTGGTTGTCTATGTAAACATTTAAATTGTGGCATTTGATGATGGGGACTGATTATAATTTAAATAAAAGTATTTAGGGACAATTTGAACTATTTGAACTTCAGAGTAATTTTATAATGTAAGCATTATTTTCTACAATGATCTCTGCAGATTCTAATTGAGGCATTTTTTTCCCTTTTCTTTCACAATCATTCCTAATCTAGATTGTATTATCTTGCTGCCTCATCTTTGAACAGGCTGATATAGACAACAGTGGAACCATAGACTATGGTGAATTCCTTGCAGCTACATTGCACCTAAATAAGATAGAGCGAGAGGATAATCTAGTTGCTGCCTTCTCCTATTTTGACAAAGATGGCAGTGGTTATATCACCATTGATGAGCTTCAACAGGCTTGCAAAGAGTTCGGTTTGGGCGATGTCCATTTGGATGAGATAATCAAAGAAATTGATCAAGATAATGTAAGTCTTTATTTATTCACTGAATATCTCCATATTGGTGATACGATTGCAATTTTGATTCCCTATGTTTTGCTTTATTCATCAGTACCTTCGTGCTCTTTATCCAACAGTATTTTCTGCTTACCCTAATGCATAATTGTTTTGTGAAAAGAAAAGATAATGCAAATCTTTGTGTTAGCCTATTCAAATACATAGATGTTATTCTCAACCAATTTAGACTGACACTAGTACTATTTCTTTTGTTCCTTCTTGTCACTCATTTTAAATCCATTGTGGTACATTTCTGGTTTCATTAGTAATATAGTTGTCTTCAAGATTTCCATGAAATTTGTTTATTGCATTGCATAGACAAGTAGGACTCAAATTCTAGTTGGATGTAGAGATCTGAAGGAGTTGGAGATTTTTATTTGACTCTATAAGAAGGATACTCTTTCAGCTGTTTTCGGATAAGTTCTTTTTCGTTTTCTTTCTTCCACCCTATGAAGAACTAAAGTTTTAATCAAATTTGGAACAGAAATTTGAAAACTACTTCTAAAACATGTTTAACAGCAAAAAAATTGTTAACCACGCCTTTTTATTTTATTTTATTTTATTTATTGGACTTGGGCTCAGTTTTCTTGTTTTATATTTTAGGTTAATTGCATTGGGTAGCACTTTTAGAATTAATAACTAATTGTATAGCAACATTTTTAAAGAATTGCAAATATAGTAAAATCTATCAGTGATAGACTCCTATTAGGGATATAGTCTATCACTAATACACTCCGAAGCTAGATCTAAATTTTGCTATACCTACAAATTATTTAGCATTGTGCTATATTTACTAATACTTTAGGCCTAATTGCTATATTTGCAACTACTCTTATATTTTAATTGGGATATTGTGGGGCCCATAATCCACTGCATTATGCTCATGGCCCACATAACTAGTCTCGGGAAGGCTTTGTTTAATCAAGAGCTGCCAGCTCTGGAAGACAAGAAGGGCACCCCTTTGGGTTGGTTTTCTAGTTTTATGTATGATGTTTTTGCTTACACCGGTCTGGTTTTCCAACCTATTGAACTATGAAGCAAAAAGAATCCTAGCATTTTTGTTGATTGTGTGATCGATGGTCCCAAAATAGACTTCCCAAGTCAGCCTTTGGTGGCAAGGGCTAGAACGTTGGAAGATACCTTCCAACTGAAAAATTTAGGCTCCGTTTGATAATTATTTAGTTAGGCTCCGTTTGATAATTATTTAGTTTTTGAAAATTGTGCTTATTTTCTTATCATTTCTTTACAATGGGTCTTTATCTTTGTCAAAGTAAAATTTGAATTCTTAGCCAAATTTCAAAAACAAAAACAAGGTTTTAAAAATTATTTTTCTTTTTTTATTTTGAAAGCATCCATAGAAGTAAGATAACAAAAATAAATAAACACATAAATGTGTTTATAACCTTAATTCTCAAAAACTGAAGACTAAAAATAAATTGGTTACTGTAATTTGCAACTTATCTTGGGGCTGGCTTTTGGGTTATTCTTGGGATTAGTGATGGTGGGTCATTAGCCTAATGCAGGGGCTGTACTCCAACCACACACACATATATAGATATACATATATATGTAGATGCATACATTTAACATACATATATATAGATATACATATATATGTAGATGTATACATATATGTTTTCTTATATATTTCTAGAGAAAGGATATCTATGCTGATAACAGATCTGTTCTATTTGTTTTCCTTTCTAGAGAAATGACATCTCTTCTCCTAAAAGTACTAAACCCGAATATTTACTTTGATGTCGTATTCTATATCTTTTGCCTTTCAGGATGGTCGTATAGACTACGAGGAATTTGCTGCAATGATGAGGAAAGGCGATGGAGGCGTCGGGAGAAGTAGAACTATGAGAAACAACTTGAACTTCAATTTGGCTGATGCTTTTGGAATAAAAGACAAATCTTTAGCAAACTAACAGGAATGATGCTGCCTAGGTTTTGTAATTTGTATAGTTGGCTAACTGTTAAAGTGCAGAAATATATTCCATAGCTTCATGACTAAGAGCTTTTTTATTTTGATTTTTTCTTTGAAGTATGCCTTTTTCTATTCTTGAAGTTCTTAAATGCTGAGGGCTCTGAATTTTCCGGACATTGCATGTGAATTTCAAGAATGTTTATTCATTTTTGGGTTGAATGAGGTCCAAGAAGAAGTCATGCCATAATTGTTTGTAGACTAAAGAAA ATGTGGTTGGCGCAGGTCATAGCAGAAAGACTGTCTGAAGAAGAAATTGGTGGCTTGAAGGAATTGTTTAAAATGATTGACACCGATAACAGTGGGTCCATAACATTTGAAGAGCTTAAAGCGGGGTTGAAAAAAGTGGGCTCTGAACTCATGGAATCTGATATCAAGTCTCTTATGGATGCGGCTGATATAGACAACAGTGGAACCATAGACTATGGTGAATTCCTTGCAGCTACATTGCACCTAAATAAGATAGAGCGAGAGGATAATCTAGTTGCTGCCTTCTCCTATTTTGACAAAGATGGCAGTGGTTATATCACCATTGATGAGCTTCAACAGGCTTGCAAAGAGTTCGGTTTGGGCGATGTCCATTTGGATGAGATAATCAAAGAAATTGATCAAGATAATGATGGTCGTATAGACTACGAGGAATTTGCTGCAATGATGAGGAAAGGCGATGGAGGCGTCGGGAGAAGTAGAACTATGAGAAACAACTTGAACTTCAATTTGGCTGATGCTTTTGGAATAAAAGACAAATCTTTAGCAAACTAACAGGAATGATGCTGCCTAGGTTTTGTAATTTGTATAGTTGGCTAACTGTTAAAGTGCAGAAATATATTCCATAGCTTCATGACTAAGAGCTTTTTTATTTTGATTTTTTCTTTGAAGTATGCCTTTTTCTATTCTTGAAGTTCTTAAATGCTGAGGGCTCTGAATTTTCCGGACATTGCATGTGAATTTCAAGAATGTTTATTCATTTTTGGGTTGAATGAGGTCCAAGAAGAAGTCATGCCATAATTGTTTGTAGACTAAAGAAA ATGTGGTTGGCGCAGGTCATAGCAGAAAGACTGTCTGAAGAAGAAATTGGTGGCTTGAAGGAATTGTTTAAAATGATTGACACCGATAACAGTGGGTCCATAACATTTGAAGAGCTTAAAGCGGGGTTGAAAAAAGTGGGCTCTGAACTCATGGAATCTGATATCAAGTCTCTTATGGATGCGGCTGATATAGACAACAGTGGAACCATAGACTATGGTGAATTCCTTGCAGCTACATTGCACCTAAATAAGATAGAGCGAGAGGATAATCTAGTTGCTGCCTTCTCCTATTTTGACAAAGATGGCAGTGGTTATATCACCATTGATGAGCTTCAACAGGCTTGCAAAGAGTTCGGTTTGGGCGATGTCCATTTGGATGAGATAATCAAAGAAATTGATCAAGATAATGATGGTCGTATAGACTACGAGGAATTTGCTGCAATGATGAGGAAAGGCGATGGAGGCGTCGGGAGAAGTAGAACTATGAGAAACAACTTGAACTTCAATTTGGCTGATGCTTTTGGAATAAAAGACAAATCTTTAGCAAACTAA MWLAQVIAERLSEEEIGGLKELFKMIDTDNSGSITFEELKAGLKKVGSELMESDIKSLMDAADIDNSGTIDYGEFLAATLHLNKIEREDNLVAAFSYFDKDGSGYITIDELQQACKEFGLGDVHLDEIIKEIDQDNDGRIDYEEFAAMMRKGDGGVGRSRTMRNNLNFNLADAFGIKDKSLAN Homology
BLAST of Lsi02G019240 vs. ExPASy Swiss-Prot
Match: Q38869 (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana OX=3702 GN=CPK4 PE=1 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 1.8e-80 Identity = 150/176 (85.23%), Postives = 166/176 (94.32%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy Swiss-Prot
Match: Q39016 (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana OX=3702 GN=CPK11 PE=1 SV=2) HSP 1 Score: 293.9 bits (751), Expect = 1.3e-78 Identity = 148/172 (86.05%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy Swiss-Prot
Match: P28583 (Calcium-dependent protein kinase SK5 OS=Glycine max OX=3847 PE=1 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 3.8e-75 Identity = 140/174 (80.46%), Postives = 161/174 (92.53%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy Swiss-Prot
Match: Q2QX45 (Calcium-dependent protein kinase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK28 PE=3 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.5e-68 Identity = 130/180 (72.22%), Postives = 157/180 (87.22%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy Swiss-Prot
Match: Q53P85 (Calcium-dependent protein kinase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK24 PE=1 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 2.6e-68 Identity = 124/168 (73.81%), Postives = 152/168 (90.48%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy TrEMBL
Match: A0A1S3CFX6 (calcium-dependent protein kinase 11 OS=Cucumis melo OX=3656 GN=LOC103500438 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 3.9e-91 Identity = 174/179 (97.21%), Postives = 177/179 (98.88%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy TrEMBL
Match: A0A5A7TYB1 (Calcium-dependent protein kinase 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002050 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 5.1e-91 Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy TrEMBL
Match: A0A6J1IH12 (calcium-dependent protein kinase 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477144 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy TrEMBL
Match: A0A0A0K7R7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G274170 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90 Identity = 173/179 (96.65%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Lsi02G019240 vs. ExPASy TrEMBL
Match: A0A6J1F6M3 (calcium-dependent protein kinase 11-like OS=Cucurbita moschata OX=3662 GN=LOC111442640 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Lsi02G019240 vs. NCBI nr
Match: XP_038899802.1 (calcium-dependent protein kinase 4 isoform X2 [Benincasa hispida]) HSP 1 Score: 347.1 bits (889), Expect = 9.6e-92 Identity = 176/179 (98.32%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Lsi02G019240 vs. NCBI nr
Match: XP_038899801.1 (calcium-dependent protein kinase 11 isoform X1 [Benincasa hispida]) HSP 1 Score: 347.1 bits (889), Expect = 9.6e-92 Identity = 176/179 (98.32%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Lsi02G019240 vs. NCBI nr
Match: XP_008461962.1 (PREDICTED: calcium-dependent protein kinase 11 [Cucumis melo]) HSP 1 Score: 344.0 bits (881), Expect = 8.1e-91 Identity = 174/179 (97.21%), Postives = 177/179 (98.88%), Query Frame = 0
BLAST of Lsi02G019240 vs. NCBI nr
Match: KAA0048200.1 (calcium-dependent protein kinase 11 [Cucumis melo var. makuwa] >TYK08057.1 calcium-dependent protein kinase 11 [Cucumis melo var. makuwa]) HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90 Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of Lsi02G019240 vs. NCBI nr
Match: XP_022976917.1 (calcium-dependent protein kinase 11-like [Cucurbita maxima]) HSP 1 Score: 341.7 bits (875), Expect = 4.0e-90 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0
BLAST of Lsi02G019240 vs. TAIR 10
Match: AT4G09570.1 (calcium-dependent protein kinase 4 ) HSP 1 Score: 300.1 bits (767), Expect = 1.3e-81 Identity = 150/176 (85.23%), Postives = 166/176 (94.32%), Query Frame = 0
BLAST of Lsi02G019240 vs. TAIR 10
Match: AT1G35670.1 (calcium-dependent protein kinase 2 ) HSP 1 Score: 293.9 bits (751), Expect = 9.0e-80 Identity = 148/172 (86.05%), Postives = 161/172 (93.60%), Query Frame = 0
BLAST of Lsi02G019240 vs. TAIR 10
Match: AT5G23580.1 (calmodulin-like domain protein kinase 9 ) HSP 1 Score: 255.0 bits (650), Expect = 4.6e-68 Identity = 129/167 (77.25%), Postives = 151/167 (90.42%), Query Frame = 0
BLAST of Lsi02G019240 vs. TAIR 10
Match: AT4G35310.1 (calmodulin-domain protein kinase 5 ) HSP 1 Score: 245.7 bits (626), Expect = 2.8e-65 Identity = 119/169 (70.41%), Postives = 148/169 (87.57%), Query Frame = 0
BLAST of Lsi02G019240 vs. TAIR 10
Match: AT2G17290.1 (Calcium-dependent protein kinase family protein ) HSP 1 Score: 245.0 bits (624), Expect = 4.8e-65 Identity = 117/168 (69.64%), Postives = 149/168 (88.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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