Lsi02G019140 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G019140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ras-related protein Rab7
Location	chr02: 25052104 .. 25056495 (+)
RNA-Seq Expression	Lsi02G019140
Synteny	Lsi02G019140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCATCTGGTTTGGAATGGAATGAAGAACACGAGGAGAAGGATAAAAAGGGAAGAGGAACATCAAAAGGAAAACTCTTGATGTAGGTGTCGTTTAGTTGTTGGAATTTAAGAATTTCAGAGGAGAGTGGGCACGAATTGCCACCCGTGGATCGGTGGATTCTCATTCATTCTACCCAACTCCCATGTTCTCCAGATTCAATTCCTTTCGTTAATCGCCATGAAAAGGTACTCTAAATTCCGATTCCTCAATTTCCCCCCACCCCCTTTTCATTGTTTTCTTTCAATTTCATCTCTTTTTTCGAATCACTTCTGTTTTTTATTCATGTTTCTCCCATTACCCAGGTTCCGAAACTAGCTTTTAGGCTGAATTTTTCCGCTATTTGTATCCGAGGCTTATAACTCTGAATTGATTGATTGATTCGTTCATTCATTCATTCATTCATTGGTTTTGTTGCCATGTCTTTCCGTAGACGGACTTTGCTTAAGGTCATCGTTCTCGGTGATAGTGGGTACGTGTCATTCATCTTCTAGGGTTCTTCTGTTGGTTACTTTTGGAATTCGGTTTTAATGATGTTTGATTTTGATTTCAGGGTTGGCAAGACGTCGTTGATGAACCAGTATCCTTCTGAAAATTGGTTGTTGAGAATGATATTGATCTGCGTTTTGAGCATGTGATCTTGGAATTCACGGTTGACTTTTTTTAGTTTGCCCCTTTATGAATGTCTTCCGAAATTTATATGCCCTTTGTGTAAGTTTATATGTGGAAAATGATGAGATTAATCTTCTTTTGTTGTTTTGTTAAATTATTGACTTGGTGAGAGGTTTGAATTATTTGTCTATTTTTTAACCCAAGCTGATATTCTCTTTTCTTTTCTTCTTTTTCTAAAATTTGGATTTCATGTTGTTTGACCATTCTTTTTCTATTTTTCTCGTATGTTTCTAATATGTTGTTTATTGAGATTTTGACCCATTGGAAATCGATGTTGAGTAATTATTACTGTTGAACTGGGATATGGGTCATTAACTAGCTAATCAGATACGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGACAGGCTTGTCACACTTCAAGTGCGTTCTACTTCTTAAAATCATTAGCATTGTAATTTTTTATGCTGTGTAGACTGTGTTGATTTTGGAACTATTATGTGCTCATGTTTATGCTAATTCATTGATATTTGCATTGCTAGATATGGGATACGGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTTGTCTATGACGTTAACGTGATGAAGTCATTTGACACACTTGACAATTGGCATGATGAGTTTCTTAGGCAGGTAAGTCAATTCAGTTCTATGAGTTATCTTGCTTTTTGTGATGCTGTGTTGCCTGTTGAGCTTGCTTATTATTACTCTGTTACTAGGATCTTTTACAGCTTGTCTGAGGAAGAACTATTAGTACATTTTGCACGATTTTTGTTTTTCATGTATGAAATCCTGTACCTGCTGATGATCGAATGCCACTGAAACTTGTTCAGTCTTGTCTCATAAGTTTAGTTTTTCCTTTCATGTCATTATTAGTAATGGTTTCAGAGAAAGGGAAGGGGCTTTTTGGTCAGTAGGGAGGATTGCATATATAGAAACAACTGGTTCAATTAGTTTGATCTATTAATTTATTTTTCATTTATAGTTTGCTTTATTTCTATAGATTTATTTATTTTGACTGGTGTGTGATTGTTCTTTTAGGCATTAATTTAATTAGCTAGCTTATGACTTTTGTTCCTTTAAGCTTTGTCTAAAACACCTTTAGAGATTTTTGTGTATTAATAAAAAGTACCGTAAGTTTAGGAGAAACTGACTAGGAGGTCATTTGTGTCTGGCTTGTAGATATTTTTTTGGCCTTTGATTTAGTAGCTTTCTTCATTGCTCGTGTACCCGTTTCTTTACCGTTGCAAGGTTTTACCCTGCCTCTTCATTTTTTCCTTCTTCTCATTGAAATAGTGTTGTTTTATTTGCGTTAATCTGGTATTCTTGATTTAATGTTTTGTGTCGCTAAGGTAATCACATTGATGTTTATGAGGATTGTGATTAAAATACTATTATAGTGGACAATGATGTCTTAGAAAACAGATTTATTCCCACAAAAAATACTGAAGGCATATATGTGCATTAGAGAAATAAAAGAAAGATACTTGTAGACCCATGCTCTCGTGGCTATCTGCATGTGTTTAGTATGTGTGCAAGTCTAATTAAGTGTATTTATATGGACTTCCAGATCTTTTTCTTATTTTGAGTTTCAATTGCTTCCAATTTTTGGATGATGTCTAAATTAGTATTCTGATCCTATATCTTTCAGGCAAACCCACCTGACCCTAGGACGTTTCCATTTATATTGCTTGGAAATAAGATTGACATTGATGGTGGGAACAGTCGAGTGGTAAGGAATAAGGATGTCAGGACCTGGACAAGCTGCACTGTGCCTTTTCTTCTCATGTTGAACTGATTTTAATTTCTGTAGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCTTACTTCGAGACATCAGCTAAAGAAGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATGTAAGTTTTGCTGAAATGTGAATTTTGTCTTTAGTGTGTTCTCAGGAATAATCTACTTTTCTGAAAAATAAAATGAAGTTGGTAATTGGTATTGAGGTAAATAGCATGTCTCCAAAAATTCTTTTCAAAATAGTTTTCCAAATGACCTCTTGGTTTTTTATCAGACTTGCATACTTTCAAAATAGTTTTCCAAATAACCTCTTGGTTTTTTATCAGACATACATACATAATATATACGCACTTGCATGCACACATTTAGTTGGTAACTTGGTGTTTAGGTAAAAACGAGAGGGAAGATTTACAGCACTTGGTTTCTAGTGCCCCTGATAGATGTTGAGCAATCTTCAAAAGAGTTTCAAGTTTGTCTTTGATATAGTAGAGGTGATTAAATATGAAACATTCTCTCAAGGTGAGATGTTTCTTATGGGGAGACAAGATGGCCCATCTGCTAGTTTAGTTGGTTTTATCCTTGGGATATCTTCCTCTTTTGAGATGTGATCAAAGTTTTTTCTTTCTGACATGTCAATATATTTGAAGTTCCACTTTATTTTTGGAGGTAATAAATGAATGAGGACATTGTAATATGTCAAAACCCTAGTTTGGCCTTTTAACATAGCATTTACCTTGATTCATGAACGCATATTTATAGTGGCAATATACCAGCAATTGCAAGTTGATACTGATCACAAAATTGCTAATCCTTCCAAAATTAGAAATGCACTGATATATGGATTCTGTTTCTTCACCCATCATTTTATCTCCTATGAGTTTTTAGGATAACTCGGTGTTATAGGGTTAGACGGTTGTCAAATGAAATTTATCGAAGTGTGCGTAAGCCATCCTGAATATTCATGTACTTAGTCAAGAAATCTTTCTTCAATATGGCCACTGGCTTTATGTGTGAGAATCAAGCTAATGCACCTGAATTTCCTGTAATACTTCTTAGTCAGTTCTACCATTTCTTTCCATTTTACCAGTTGATTGTGTGTATTTTACCTCAGAATTCCAACATTTTGTTGTTATCGTTGCTACGATGTCTCTGTTCATGTTTTAGCATTGGGCTGTGTCCTTCATTTGTAATATTCATGATGTTCCATACCTTGTTTTCCTTACAAGACATTGGACAAGACCGAAAAATGTGAACTCCTCACTGTTGTTCTTGAATGCAATTGCAGATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGTGCATGCTGAATCCAGAAACCGAGAGACTCGGGAACTGTAACACCCATCCTTATGGTTCCAATTCTTATACATTTTTGCTGGCTTTGTGATCCATAACTAATCTTTGGTTGCAGACCTTCTGTTCCATGACCTAACCACTGAAACTTGAATTCATCTTTTTTTTTTCTTTTCTTTTCTTTTTAAAGAAATTAGCTTCCTTTTCGTGAGGTAAGAACTTTATGGGATGTCTCGAGTCTGTAGGATCCATTATTTCAAGGATTCTCACCATCACAGTGTTCCTGAGTTAATAGTTTCTGGGCATCTGAATTCTTTCTTATGTTCAGGACGTTTCTTTTATGTATTTTATATTTCTTTATTTCTTCTGGCGGCTTCCTGTTCTATTTGAACTCTTTTCTATGAAACTGAGAATGGATTCATTGGTTCTTTCTTA

mRNA sequence

ATTTTCATCTGGTTTGGAATGGAATGAAGAACACGAGGAGAAGGATAAAAAGGGAAGAGGAACATCAAAAGGAAAACTCTTGATGTAGGTGTCGTTTAGTTGTTGGAATTTAAGAATTTCAGAGGAGAGTGGGCACGAATTGCCACCCGTGGATCGGTGGATTCTCATTCATTCTACCCAACTCCCATGTTCTCCAGATTCAATTCCTTTCGTTAATCGCCATGAAAAGGTTCCGAAACTAGCTTTTAGGCTGAATTTTTCCGCTATTTGTATCCGAGGCTTATAACTCTGAATTGATTGATTGATTCGTTCATTCATTCATTCATTCATTGGTTTTGTTGCCATGTCTTTCCGTAGACGGACTTTGCTTAAGGTCATCGTTCTCGGTGATAGTGGGGTTGGCAAGACGTCGTTGATGAACCAGTATCCTTCTGAAAATTGGTTGTTGAGAATGATATTGATCTGCGTTTTGAGCATATACGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGACAGGCTTGTCACACTTCAAATATGGGATACGGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTTGTCTATGACGTTAACGTGATGAAGTCATTTGACACACTTGACAATTGGCATGATGAGTTTCTTAGGCAGGTAAGTCAATTCAGTTCTATGAGTTATCTTGCTTTTTGTGATGCTGTGTTGCCTGTTGAGCTTGCTTATTATTACTCTGTTACTAGGATCTTTTACAGCTTGTCTGAGGAAGAACTATTAGTACATTTTGCACGATTTTTGTTTTTCATATTTATTTATTTTGACTGGTGTAGATTTTTGTGTATTAATAAAAAGTACCTAGCTTTCTTCATTGCTCGTGTACCCGTTTCTTTACCGTTGCAAGTATGTGTGCAAGCAAACCCACCTGACCCTAGGACGTTTCCATTTATATTGCTTGGAAATAAGATTGACATTGATGGTGGGAACAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCTTACTTCGAGACATCAGCTAAAGAAGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGTGCATGCTGAATCCAGAAACCGAGAGACTCGGGAACTGTAACACCCATCCTTATGGTTCCAATTCTTATACATTTTTGCTGGCTTTGTGATCCATAACTAATCTTTGGTTGCAGACCTTCTGTTCCATGACCTAACCACTGAAACTTGAATTCATCTTTTTTTTTTCTTTTCTTTTCTTTTTAAAGAAATTAGCTTCCTTTTCGTGAGGTAAGAACTTTATGGGATGTCTCGAGTCTGTAGGATCCATTATTTCAAGGATTCTCACCATCACAGTGTTCCTGAGTTAATAGTTTCTGGGCATCTGAATTCTTTCTTATGTTCAGGACGTTTCTTTTATGTATTTTATATTTCTTTATTTCTTCTGGCGGCTTCCTGTTCTATTTGAACTCTTTTCTATGAAACTGAGAATGGATTCATTGGTTCTTTCTTA

Coding sequence (CDS)

ATGTCTTTCCGTAGACGGACTTTGCTTAAGGTCATCGTTCTCGGTGATAGTGGGGTTGGCAAGACGTCGTTGATGAACCAGTATCCTTCTGAAAATTGGTTGTTGAGAATGATATTGATCTGCGTTTTGAGCATATACGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGACAGGCTTGTCACACTTCAAATATGGGATACGGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTTGTCTATGACGTTAACGTGATGAAGTCATTTGACACACTTGACAATTGGCATGATGAGTTTCTTAGGCAGGTAAGTCAATTCAGTTCTATGAGTTATCTTGCTTTTTGTGATGCTGTGTTGCCTGTTGAGCTTGCTTATTATTACTCTGTTACTAGGATCTTTTACAGCTTGTCTGAGGAAGAACTATTAGTACATTTTGCACGATTTTTGTTTTTCATATTTATTTATTTTGACTGGTGTAGATTTTTGTGTATTAATAAAAAGTACCTAGCTTTCTTCATTGCTCGTGTACCCGTTTCTTTACCGTTGCAAGTATGTGTGCAAGCAAACCCACCTGACCCTAGGACGTTTCCATTTATATTGCTTGGAAATAAGATTGACATTGATGGTGGGAACAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCTTACTTCGAGACATCAGCTAAAGAAGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGTGCATGCTGA

Protein sequence

MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIYFDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC

Homology

[Close]

BLAST of Lsi02G019140 vs. ExPASy Swiss-Prot
Match: Q43463 (Ras-related protein Rab7 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.9e-95
Identity = 191/309 (61.81%), Postives = 197/309 (63.75%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTL+NW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           H+EFL+                                                      
Sbjct: 121 HEEFLK------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPR FPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRAFPFILLGNKIDIDGGNSRVV 206

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVV-E 300
           SEKKA++WCA+K NIPYFETSAKEDYNVDAAFLCIAK ALANEHEQDIYFQGIPE  V E
Sbjct: 241 SEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPE 206

Query: 301 TEQRGGCAC 309
            EQR GCAC
Sbjct: 301 NEQRSGCAC 206

[Close]

BLAST of Lsi02G019140 vs. ExPASy Swiss-Prot
Match: Q41640 (Ras-related protein Rab7 OS=Vigna aconitifolia OX=3918 PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.3e-95
Identity = 190/309 (61.49%), Postives = 197/309 (63.75%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRRTLLKVIVLGD+GVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSLRRRTLLKVIVLGDTGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVL YDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           H+EFL+                                                      
Sbjct: 121 HEEFLK------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPR+FPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRSFPFILLGNKIDIDGGNSRVV 206

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVV-E 300
           SEKKA++WCASK NIPYFETSAKED+NVDAAFLCIAK ALANEHEQDIYFQGIPE  V E
Sbjct: 241 SEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPE 206

Query: 301 TEQRGGCAC 309
            EQR GCAC
Sbjct: 301 NEQRSGCAC 206

[Close]

BLAST of Lsi02G019140 vs. ExPASy Swiss-Prot
Match: Q948K8 (Ras-related protein RABG3a OS=Arabidopsis thaliana OX=3702 GN=RABG3A PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 7.5e-84
Identity = 169/309 (54.69%), Postives = 188/309 (60.84%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           M+ RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFS QYKATIG
Sbjct: 1   MATRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSMQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LVYDVNV++SFD L+ W
Sbjct: 61  ADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           H+EFL+                                                      
Sbjct: 121 HEEFLK------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QA+P DP+TFPFI+LGNKID+DGG+SRVV
Sbjct: 181 -------------------------------QASPSDPKTFPFIVLGNKIDVDGGSSRVV 206

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           S+KKA +WCAS  NIPYFETSAK+D+NVD AFL IAKTALANEHEQDIYFQGIP+ V E 
Sbjct: 241 SDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQDIYFQGIPDAVTEN 206

Query: 301 EQR-GGCAC 309
           E + GGCAC
Sbjct: 301 EPKGGGCAC 206

[Close]

BLAST of Lsi02G019140 vs. ExPASy Swiss-Prot
Match: O04157 (Ras-related protein RABG3b OS=Arabidopsis thaliana OX=3702 GN=RABG3B PE=1 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.9e-83
Identity = 173/308 (56.17%), Postives = 185/308 (60.06%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRRTLLKVI+LGDSGVGKTSLMNQ                  YV+ KFSQQYKATIG
Sbjct: 1   MSTRRRTLLKVIILGDSGVGKTSLMNQ------------------YVNNKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++LDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           H+EFL                                                       
Sbjct: 121 HNEFL------------------------------------------------------- 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          +A+P DP  FPFILLGNK+DIDGGNSRVV
Sbjct: 181 ------------------------------TRASPRDPMAFPFILLGNKVDIDGGNSRVV 203

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCA K NI YFETSAKEDYNVD +FLCI K ALANE +QDIYFQ  P+T    
Sbjct: 241 SEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQDIYFQ--PDTGSVP 203

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 203

[Close]

BLAST of Lsi02G019140 vs. ExPASy Swiss-Prot
Match: Q9XER8 (Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.1e-73
Identity = 155/313 (49.52%), Postives = 179/313 (57.19%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           M+ RRR LLKVI+LGDSGVGKTSLMNQ                  YV++KFS QYKATIG
Sbjct: 1   MASRRRMLLKVIILGDSGVGKTSLMNQ------------------YVNRKFSNQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADF+TKE+Q DDRL TLQIWDTAGQERFQSLGVAFYRGADCCVLV+DVNVMKSFD L+NW
Sbjct: 61  ADFLTKEVQFDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
            +EFL                                                       
Sbjct: 121 REEFL------------------------------------------------------- 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                         +QA+P DP  FPF++LGNK+D+DGGNSRVV
Sbjct: 181 ------------------------------IQASPSDPENFPFVVLGNKVDVDGGNSRVV 207

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETV--- 300
           SEKKA+ WCASK NIPYFETSAKE +NVDAAF CIA+ AL NE E++IY   +PET+   
Sbjct: 241 SEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNEPEEEIY---LPETIDVA 207

Query: 301 --VETEQRGGCAC 309
                ++  GC C
Sbjct: 301 SGGRPQRSTGCEC 207

[Close]

BLAST of Lsi02G019140 vs. ExPASy TrEMBL
Match: A0A5D3DID1 (Ras-related protein Rab7 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001450 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.4e-101
Identity = 205/308 (66.56%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MSFRRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET
Sbjct: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 205

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 205

[Close]

BLAST of Lsi02G019140 vs. ExPASy TrEMBL
Match: A0A0A0K5B9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206950 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.4e-101
Identity = 205/308 (66.56%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MSFRRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET
Sbjct: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 205

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 205

[Close]

BLAST of Lsi02G019140 vs. ExPASy TrEMBL
Match: A0A6J1DPY5 (ras-related protein Rab7 OS=Momordica charantia OX=3673 GN=LOC111023240 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.4e-101
Identity = 205/308 (66.56%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MSFRRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET
Sbjct: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 205

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 205

[Close]

BLAST of Lsi02G019140 vs. ExPASy TrEMBL
Match: A0A1S3BJ29 (ras-related protein Rab7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490155 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.4e-101
Identity = 205/308 (66.56%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MSFRRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET
Sbjct: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 205

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 205

[Close]

BLAST of Lsi02G019140 vs. ExPASy TrEMBL
Match: A0A6J1IIL4 (ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111473540 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.6e-100
Identity = 203/308 (65.91%), Postives = 204/308 (66.23%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASKENIPYFETSA+EDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET
Sbjct: 241 SEKKAREWCASKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 205

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 205

[Close]

BLAST of Lsi02G019140 vs. NCBI nr
Match: XP_004139780.1 (ras-related protein Rab7 isoform X1 [Cucumis sativus] >XP_008447759.1 PREDICTED: ras-related protein Rab7 isoform X1 [Cucumis melo] >XP_022156315.1 ras-related protein Rab7 [Momordica charantia] >XP_038899858.1 ras-related protein Rab7 [Benincasa hispida] >TYK23140.1 ras-related protein Rab7 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 379.4 bits (973), Expect = 2.9e-101
Identity = 205/308 (66.56%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MSFRRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET
Sbjct: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 205

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 205

[Close]

BLAST of Lsi02G019140 vs. NCBI nr
Match: XP_022930211.1 (ras-related protein Rab7-like [Cucurbita moschata] >XP_022974789.1 ras-related protein Rab7-like [Cucurbita maxima] >XP_023536071.1 ras-related protein Rab7-like [Cucurbita pepo subsp. pepo] >KAG6570291.1 hypothetical protein SDJN03_30361, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375.9 bits (964), Expect = 3.2e-100
Identity = 203/308 (65.91%), Postives = 204/308 (66.23%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANPPDPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPPDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASKENIPYFETSA+EDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET
Sbjct: 241 SEKKAREWCASKENIPYFETSAREDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 205

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 205

[Close]

BLAST of Lsi02G019140 vs. NCBI nr
Match: XP_008447760.1 (PREDICTED: ras-related protein Rab7 isoform X2 [Cucumis melo] >XP_011658964.1 ras-related protein Rab7 isoform X2 [Cucumis sativus] >KAE8646044.1 hypothetical protein Csa_016247 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 3.6e-99
Identity = 201/305 (65.90%), Postives = 202/305 (66.23%), Query Frame = 0


Query: 4   RRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIGADF 63
           +RRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIGADF
Sbjct: 2   KRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIGADF 61

Query: 64  VTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDE 123
           VTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDE
Sbjct: 62  VTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDE 121

Query: 124 FLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIYFDW 183
           FLR                                                         
Sbjct: 122 FLR--------------------------------------------------------- 181

Query: 184 CRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVVSEK 243
                                       QANPPDPRTFPFILLGNKIDIDGGNSRVVSEK
Sbjct: 182 ----------------------------QANPPDPRTFPFILLGNKIDIDGGNSRVVSEK 203

Query: 244 KAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQR 303
           KAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQR
Sbjct: 242 KAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQR 203

Query: 304 GGCAC 309
           GGCAC
Sbjct: 302 GGCAC 203

[Close]

BLAST of Lsi02G019140 vs. NCBI nr
Match: XP_022972894.1 (ras-related protein Rab7 isoform X2 [Cucurbita maxima] >XP_023520876.1 ras-related protein Rab7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.5 bits (950), Expect = 1.4e-98
Identity = 201/308 (65.26%), Postives = 202/308 (65.58%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANP DPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPSDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASK+NIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET
Sbjct: 241 SEKKAREWCASKDNIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 205

Query: 301 EQRGGCAC 309
           EQR GCAC
Sbjct: 301 EQRSGCAC 205

[Close]

BLAST of Lsi02G019140 vs. NCBI nr
Match: XP_022932077.1 (ras-related protein Rab7 isoform X2 [Cucurbita moschata] >KAG6607610.1 hypothetical protein SDJN03_00952, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.2 bits (949), Expect = 1.8e-98
Identity = 200/308 (64.94%), Postives = 202/308 (65.58%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFSQQYKATIG
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           HDEFLR                                                      
Sbjct: 121 HDEFLR------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QANP DPRTFPFILLGNKIDIDGGNSRVV
Sbjct: 181 -------------------------------QANPSDPRTFPFILLGNKIDIDGGNSRVV 205

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCASK+NIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPET+VET
Sbjct: 241 SEKKAREWCASKDNIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETIVET 205

Query: 301 EQRGGCAC 309
           EQR GCAC
Sbjct: 301 EQRSGCAC 205

[Close]

BLAST of Lsi02G019140 vs. TAIR 10
Match: AT4G09720.3 (RAB GTPase homolog G3A )

HSP 1 Score: 316.6 bits (810), Expect = 2.2e-86
Identity = 170/309 (55.02%), Postives = 193/309 (62.46%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           M+ RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFS QYKATIG
Sbjct: 1   MATRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSMQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LVYDVNV++SFD L+ W
Sbjct: 61  ADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           H+EFL+Q                                                     
Sbjct: 121 HEEFLKQA---------------------------------------------------- 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
             W                    ++ +    +A+P DP+TFPFI+LGNKID+DGG+SRVV
Sbjct: 181 --W--------------------NIGMWTIAEASPSDPKTFPFIVLGNKIDVDGGSSRVV 217

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           S+KKA +WCAS  NIPYFETSAK+D+NVD AFL IAKTALANEHEQDIYFQGIP+ V E 
Sbjct: 241 SDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQDIYFQGIPDAVTEN 217

Query: 301 EQR-GGCAC 309
           E + GGCAC
Sbjct: 301 EPKGGGCAC 217

[Close]

BLAST of Lsi02G019140 vs. TAIR 10
Match: AT4G09720.1 (RAB GTPase homolog G3A )

HSP 1 Score: 312.0 bits (798), Expect = 5.4e-85
Identity = 169/309 (54.69%), Postives = 188/309 (60.84%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           M+ RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFS QYKATIG
Sbjct: 1   MATRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSMQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LVYDVNV++SFD L+ W
Sbjct: 61  ADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           H+EFL+                                                      
Sbjct: 121 HEEFLK------------------------------------------------------ 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          QA+P DP+TFPFI+LGNKID+DGG+SRVV
Sbjct: 181 -------------------------------QASPSDPKTFPFIVLGNKIDVDGGSSRVV 206

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           S+KKA +WCAS  NIPYFETSAK+D+NVD AFL IAKTALANEHEQDIYFQGIP+ V E 
Sbjct: 241 SDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQDIYFQGIPDAVTEN 206

Query: 301 EQR-GGCAC 309
           E + GGCAC
Sbjct: 301 EPKGGGCAC 206

[Close]

BLAST of Lsi02G019140 vs. TAIR 10
Match: AT4G09720.4 (RAB GTPase homolog G3A )

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-84
Identity = 170/309 (55.02%), Postives = 189/309 (61.17%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           M+ RRRTLLKVIVLGDSGVGKTSLMNQ                  YVHKKFS QYKATIG
Sbjct: 1   MATRRRTLLKVIVLGDSGVGKTSLMNQ------------------YVHKKFSMQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LVYDVNV++SFD L+ W
Sbjct: 61  ADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           H+EFL+Q                                                     
Sbjct: 121 HEEFLKQA---------------------------------------------------- 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
             W   +C                          P DP+TFPFI+LGNKID+DGG+SRVV
Sbjct: 181 --WNIGMC--------------------------PSDPKTFPFIVLGNKIDVDGGSSRVV 211

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           S+KKA +WCAS  NIPYFETSAK+D+NVD AFL IAKTALANEHEQDIYFQGIP+ V E 
Sbjct: 241 SDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQDIYFQGIPDAVTEN 211

Query: 301 EQR-GGCAC 309
           E + GGCAC
Sbjct: 301 EPKGGGCAC 211

[Close]

BLAST of Lsi02G019140 vs. TAIR 10
Match: AT1G22740.1 (RAB GTPase homolog G3B )

HSP 1 Score: 309.3 bits (791), Expect = 3.5e-84
Identity = 173/308 (56.17%), Postives = 185/308 (60.06%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRRTLLKVI+LGDSGVGKTSLMNQ                  YV+ KFSQQYKATIG
Sbjct: 1   MSTRRRTLLKVIILGDSGVGKTSLMNQ------------------YVNNKFSQQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++LDNW
Sbjct: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
           H+EFL                                                       
Sbjct: 121 HNEFL------------------------------------------------------- 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                          +A+P DP  FPFILLGNK+DIDGGNSRVV
Sbjct: 181 ------------------------------TRASPRDPMAFPFILLGNKVDIDGGNSRVV 203

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKAREWCA K NI YFETSAKEDYNVD +FLCI K ALANE +QDIYFQ  P+T    
Sbjct: 241 SEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQDIYFQ--PDTGSVP 203

Query: 301 EQRGGCAC 309
           EQRGGCAC
Sbjct: 301 EQRGGCAC 203

[Close]

BLAST of Lsi02G019140 vs. TAIR 10
Match: AT1G52280.1 (RAB GTPase homolog G3D )

HSP 1 Score: 272.3 bits (695), Expect = 4.7e-73
Identity = 152/309 (49.19%), Postives = 172/309 (55.66%), Query Frame = 0


Query: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQYPSENWLLRMILICVLSIYVHKKFSQQYKATIG 60
           MS RRR LLKVI+LGDSGVGKTSLMNQ                  +V++KFS QYKATIG
Sbjct: 1   MSSRRRVLLKVIILGDSGVGKTSLMNQ------------------FVNRKFSNQYKATIG 60

Query: 61  ADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNW 120
           ADF+TKE+QIDDR+ TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD L+NW
Sbjct: 61  ADFLTKEVQIDDRIFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNW 120

Query: 121 HDEFLRQVSQFSSMSYLAFCDAVLPVELAYYYSVTRIFYSLSEEELLVHFARFLFFIFIY 180
            +EFL                                                       
Sbjct: 121 REEFL------------------------------------------------------- 180

Query: 181 FDWCRFLCINKKYLAFFIARVPVSLPLQVCVQANPPDPRTFPFILLGNKIDIDGGNSRVV 240
                                         +QA+P DP  FPF++LGNK D+DGG SRVV
Sbjct: 181 ------------------------------IQASPSDPENFPFVVLGNKTDVDGGKSRVV 206

Query: 241 SEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVET 300
           SEKKA+ WCASK NIPYFETSAKE +NVDAAF CI K A  NE E++ Y     +     
Sbjct: 241 SEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNEPEEEPYLPDTIDVAGGQ 206

Query: 301 EQRG-GCAC 309
           +QR  GC C
Sbjct: 301 QQRSTGCEC 206

The following BLAST results are available for this feature:

BLAST of Lsi02G019140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43463	1.9e-95	61.81	Ras-related protein Rab7 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q41640	4.3e-95	61.49	Ras-related protein Rab7 OS=Vigna aconitifolia OX=3918 PE=2 SV=1	[more]
Q948K8	7.5e-84	54.69	Ras-related protein RABG3a OS=Arabidopsis thaliana OX=3702 GN=RABG3A PE=2 SV=1	[more]
O04157	4.9e-83	56.17	Ras-related protein RABG3b OS=Arabidopsis thaliana OX=3702 GN=RABG3B PE=1 SV=1	[more]
Q9XER8	2.1e-73	49.52	Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1	[more]

BLAST of Lsi02G019140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DID1	1.4e-101	66.56	Ras-related protein Rab7 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0K5B9	1.4e-101	66.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G206950 PE=4 SV=1	[more]
A0A6J1DPY5	1.4e-101	66.56	ras-related protein Rab7 OS=Momordica charantia OX=3673 GN=LOC111023240 PE=4 SV=...	[more]
A0A1S3BJ29	1.4e-101	66.56	ras-related protein Rab7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490155 PE=4...	[more]
A0A6J1IIL4	1.6e-100	65.91	ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111473540 PE=4 S...	[more]

BLAST of Lsi02G019140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139780.1	2.9e-101	66.56	ras-related protein Rab7 isoform X1 [Cucumis sativus] >XP_008447759.1 PREDICTED:...	[more]
XP_022930211.1	3.2e-100	65.91	ras-related protein Rab7-like [Cucurbita moschata] >XP_022974789.1 ras-related p...	[more]
XP_008447760.1	3.6e-99	65.90	PREDICTED: ras-related protein Rab7 isoform X2 [Cucumis melo] >XP_011658964.1 ra...	[more]
XP_022972894.1	1.4e-98	65.26	ras-related protein Rab7 isoform X2 [Cucurbita maxima] >XP_023520876.1 ras-relat...	[more]
XP_022932077.1	1.8e-98	64.94	ras-related protein Rab7 isoform X2 [Cucurbita moschata] >KAG6607610.1 hypotheti...	[more]

BLAST of Lsi02G019140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09720.3	2.2e-86	55.02	RAB GTPase homolog G3A	[more]
AT4G09720.1	5.4e-85	54.69	RAB GTPase homolog G3A	[more]
AT4G09720.4	1.2e-84	55.02	RAB GTPase homolog G3A	[more]
AT1G22740.1	3.5e-84	56.17	RAB GTPase homolog G3B	[more]
AT1G52280.1	4.7e-73	49.19	RAB GTPase homolog G3D	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 50..66 score: 35.52 coord: 68..90 score: 50.7 coord: 9..30 score: 43.88
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..282 e-value: 3.0E-11 score: 42.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..282 e-value: 2.1E-48 score: 176.8
None	No IPR available	PANTHER	PTHR47981	RAB FAMILY	coord: 211..308
None	No IPR available	PANTHER	PTHR47981	RAB FAMILY	coord: 1..32 coord: 42..130
None	No IPR available	PANTHER	PTHR47981:SF23	RAS-RELATED PROTEIN RABG3A	coord: 1..32 coord: 42..130 coord: 211..308
None	No IPR available	PROSITE	PS51419	RAB	coord: 4..308 score: 27.448971
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..284 score: 10.508417
None	No IPR available	CDD	cd01862	Rab7	coord: 9..285 e-value: 1.22542E-107 score: 308.439
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..282 e-value: 1.6E-4 score: -59.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 41..130 e-value: 5.4E-29 score: 100.9 coord: 219..279 e-value: 8.4E-11 score: 41.7
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..308 score: 12.21968
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..144 e-value: 2.5E-39 score: 136.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 207..293 e-value: 6.9E-18 score: 66.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G019140.1	Lsi02G019140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding