Lsi02G019000 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi02G019000
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF584
Location	chr02: 24934301 .. 24934873 (-)
RNA-Seq Expression	Lsi02G019000
Synteny	Lsi02G019000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGCGGCAGAATTGGCCTGAGCACCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGAAGAAGAAGACGTCTGGAACGTTCTCAACGACAAATCCACAACAACCACTTCAACAACCACCGATCATTCAAACTTCTGCACCGATTCATCCATTATCGAATCCTCTTTTCTTCCATGCGCTTCCAGAATGATTCCGAGGCCGAACGGCAGCGGCGGCGGCGGTGGCGGCAGCTATGTTCAGATTGTGCCGAGATCGGCTCCTCGCTCGATTCCACAGTGGTTCAAACGTGAGGGAAGTAAAAACCCTAGGAAACTGGGATCGGAGCAGGATGATGAGGATGGAAGTGGCGGTGACGGCGGCGATAGCGAGGAGGAGGAGGAGGAGGAGGGAGAAGAAGGATTTGAAAACAGAGTTCCGCCGCATGAATTGGTAGCGAAGAGATTGGCTAGGGCTCAGATTTCGTCGTTCTCTGTGTTTGAAGGAGTTGGAAGAACTTTGAAAGGGAGGGATCTGAGTAAAGTAAGAAATGCTGTTCTTAACAAAACTGGATTTCTTGAATCGCTATGA

mRNA sequence

ATGGACGGCGGCAGAATTGGCCTGAGCACCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGAAGAAGAAGACGTCTGGAACGTTCTCAACGACAAATCCACAACAACCACTTCAACAACCACCGATCATTCAAACTTCTGCACCGATTCATCCATTATCGAATCCTCTTTTCTTCCATGCGCTTCCAGAATGATTCCGAGGCCGAACGGCAGCGGCGGCGGCGGTGGCGGCAGCTATGTTCAGATTGTGCCGAGATCGGCTCCTCGCTCGATTCCACAGTGGTTCAAACGTGAGGGAAGTAAAAACCCTAGGAAACTGGGATCGGAGCAGGATGATGAGGATGGAAGTGGCGGTGACGGCGGCGATAGCGAGGAGGAGGAGGAGGAGGAGGGAGAAGAAGGATTTGAAAACAGAGTTCCGCCGCATGAATTGGTAGCGAAGAGATTGGCTAGGGCTCAGATTTCGTCGTTCTCTGTGTTTGAAGGAGTTGGAAGAACTTTGAAAGGGAGGGATCTGAGTAAAGTAAGAAATGCTGTTCTTAACAAAACTGGATTTCTTGAATCGCTATGA

Coding sequence (CDS)

ATGGACGGCGGCAGAATTGGCCTGAGCACCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGAAGAAGAAGACGTCTGGAACGTTCTCAACGACAAATCCACAACAACCACTTCAACAACCACCGATCATTCAAACTTCTGCACCGATTCATCCATTATCGAATCCTCTTTTCTTCCATGCGCTTCCAGAATGATTCCGAGGCCGAACGGCAGCGGCGGCGGCGGTGGCGGCAGCTATGTTCAGATTGTGCCGAGATCGGCTCCTCGCTCGATTCCACAGTGGTTCAAACGTGAGGGAAGTAAAAACCCTAGGAAACTGGGATCGGAGCAGGATGATGAGGATGGAAGTGGCGGTGACGGCGGCGATAGCGAGGAGGAGGAGGAGGAGGAGGGAGAAGAAGGATTTGAAAACAGAGTTCCGCCGCATGAATTGGTAGCGAAGAGATTGGCTAGGGCTCAGATTTCGTCGTTCTCTGTGTTTGAAGGAGTTGGAAGAACTTTGAAAGGGAGGGATCTGAGTAAAGTAAGAAATGCTGTTCTTAACAAAACTGGATTTCTTGAATCGCTATGA

Protein sequence

MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLESL

Homology

[Close]

BLAST of Lsi02G019000 vs. ExPASy TrEMBL
Match: A0A6J1CEH3 (uncharacterized protein LOC111010482 OS=Momordica charantia OX=3673 GN=LOC111010482 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 136/197 (69.04%), Postives = 150/197 (76.14%), Query Frame = 0


Query: 1   MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIES- 60
           M+GG  GL   S+ALWRSFRNGDFEEEDVW+VL +KSTTT S ++D S F TDSSI+ S 
Sbjct: 1   MEGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASV 60

Query: 61  ---SFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDD 120
              +  P A  MIPRPNGSG        QI PRSAPRSIPQWF   G+KNPRK   E DD
Sbjct: 61  SAANHFPSAYGMIPRPNGSGN------FQIAPRSAPRSIPQWFTPNGNKNPRKSVPEHDD 120

Query: 121 EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDL 180
           + G G D GDSE+E+    EEGF+ RVPPHEL+AKRLARAQISSFSVFEGVGRTLKGRDL
Sbjct: 121 DGGGGDDDGDSEDED----EEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDL 180

Query: 181 SKVRNAVLNKTGFLESL 191
           SKVRNAVL KTGFLESL
Sbjct: 181 SKVRNAVLTKTGFLESL 187

[Close]

BLAST of Lsi02G019000 vs. ExPASy TrEMBL
Match: A0A0A0K3A6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211080 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 7.3e-56
Identity = 135/195 (69.23%), Postives = 143/195 (73.33%), Query Frame = 0


Query: 1   MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLP 60
           MDGGR  L+TALWRSFRNGDFEEEDVWNVLN+KS     TT+ HS+F TDSSI+ES FLP
Sbjct: 1   MDGGRTALTTALWRSFRNGDFEEEDVWNVLNEKS----KTTSYHSSFPTDSSIMESPFLP 60

Query: 61  CASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRK---LGSEQDDEDG- 120
            ASRMIPRPNG  G   G            SIPQW K E  KNPR       E+DDEDG 
Sbjct: 61  SASRMIPRPNGGVGAQIG------------SIPQWSKTERRKNPRNRKVCWDEEDDEDGV 120

Query: 121 -SGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSK 180
             GG   + EEEEEEE EEG   RVPPHEL+AKRLARAQISSFSVFEG GRTLKGRDLSK
Sbjct: 121 VEGGGSEEEEEEEEEEEEEGIGKRVPPHELIAKRLARAQISSFSVFEGAGRTLKGRDLSK 179

Query: 181 VRNAVLNKTGFLESL 191
           VRNAVL KTGFLESL
Sbjct: 181 VRNAVLTKTGFLESL 179

[Close]

BLAST of Lsi02G019000 vs. ExPASy TrEMBL
Match: A0A5A7SG90 (Casein kinase II subunit beta-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00970 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 6.1e-55
Identity = 135/197 (68.53%), Postives = 142/197 (72.08%), Query Frame = 0


Query: 1   MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFL 60
           MDG R  L+TALWRSFRNGDFEE+DVWNVLND  +TTTSTTT  HSNF T     +SSFL
Sbjct: 1   MDGARTALTTALWRSFRNGDFEEQDVWNVLNDDESTTTSTTTSYHSNFST----ADSSFL 60

Query: 61  PCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRK-----LGSEQDDE 120
           P ASRMIPRPNG  GG  G             IPQW K E SKNPR         E+DDE
Sbjct: 61  PSASRMIPRPNGGVGGQIG------------LIPQWLKSERSKNPRNRIRKVCWDEEDDE 120

Query: 121 DGSGGDGGDSEEEEEEEGE-EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDL 180
           DG  G G   EEEEEEE E EG E RVPPHEL+AKRLARAQISSFSVFEG GRTLKGRDL
Sbjct: 121 DGVEGGGHSKEEEEEEEEEGEGIEKRVPPHELIAKRLARAQISSFSVFEGAGRTLKGRDL 180

Query: 181 SKVRNAVLNKTGFLESL 191
           SKVRNAVL KTGFLES+
Sbjct: 181 SKVRNAVLTKTGFLESI 181

[Close]

BLAST of Lsi02G019000 vs. ExPASy TrEMBL
Match: A0A1S3BIQ4 (casein kinase II subunit beta-2 OS=Cucumis melo OX=3656 GN=LOC103490138 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.3e-54
Identity = 135/202 (66.83%), Postives = 142/202 (70.30%), Query Frame = 0


Query: 1   MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFL 60
           MDG R  L+TALWRSFRNGDFEE+DVWNVLND  +TTTSTTT  HSNF T     +SSFL
Sbjct: 1   MDGARTALTTALWRSFRNGDFEEQDVWNVLNDHESTTTSTTTSYHSNFST----ADSSFL 60

Query: 61  PCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRK-----LGSEQDDE 120
           P ASRMIPRPNG  GG  G             IPQW K E SKNPR         E+DDE
Sbjct: 61  PSASRMIPRPNGGVGGQIG------------LIPQWLKSERSKNPRNRIRKVCWDEEDDE 120

Query: 121 DGSGGDGGDSEEEEEEEGE------EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTL 180
           DG  G G   EEEEEEE E      EG E RVPPHEL+AKRLARAQISSFSVFEG GRTL
Sbjct: 121 DGVEGGGHSKEEEEEEEEEEEEEEGEGIEKRVPPHELIAKRLARAQISSFSVFEGAGRTL 180

Query: 181 KGRDLSKVRNAVLNKTGFLESL 191
           KGRDLSKVRNAVL KTGFLES+
Sbjct: 181 KGRDLSKVRNAVLTKTGFLESI 186

[Close]

BLAST of Lsi02G019000 vs. ExPASy TrEMBL
Match: A0A6J1F7L6 (uncharacterized protein LOC111442861 OS=Cucurbita moschata OX=3662 GN=LOC111442861 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.8e-53
Identity = 130/198 (65.66%), Postives = 142/198 (71.72%), Query Frame = 0


Query: 1   MDGGRIG---LSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS 60
           M GGR G    S+ALWRSFRNGDFEEEDVW VL +KS  TTS T+D S+F +DS I+ES+
Sbjct: 1   MAGGRNGGSRQSSALWRSFRNGDFEEEDVWEVLKEKS-KTTSKTSDDSSFFSDSLILESA 60

Query: 61  ----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDD 120
                LP ASRMIPR NG G        QI  RSAPRSIPQWFK  G KN R   SE DD
Sbjct: 61  SVNHLLPSASRMIPRSNGGGN------AQIASRSAPRSIPQWFKPNGIKNLRNFASEHDD 120

Query: 121 --EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGR 180
              DG   DG D       E EEGF+NR+PPHEL+AKR ARAQISSFSVFEG+GRTLKGR
Sbjct: 121 SWSDGVASDGDD-------EDEEGFDNRIPPHELIAKRRARAQISSFSVFEGIGRTLKGR 180

Query: 181 DLSKVRNAVLNKTGFLES 190
           DLS+VRNAVLNKTGFLES
Sbjct: 181 DLSRVRNAVLNKTGFLES 184

[Close]

BLAST of Lsi02G019000 vs. NCBI nr
Match: XP_038898769.1 (uncharacterized protein LOC120086282 [Benincasa hispida])

HSP 1 Score: 289.7 bits (740), Expect = 1.9e-74
Identity = 156/191 (81.68%), Postives = 166/191 (86.91%), Query Frame = 0


Query: 1   MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLP 60
           MDGGRIGLS+ALWRSFRNGDFEEEDVW+VLNDKS TTTS T DHS F +DS + ES FLP
Sbjct: 1   MDGGRIGLSSALWRSFRNGDFEEEDVWHVLNDKS-TTTSETFDHSKFSSDSYVFESDFLP 60

Query: 61  CASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGSGGD 120
            ASRMIPRPN      GG Y QIVPRSAPRSIPQWFKREGS+NPR +G EQDDEDG  GD
Sbjct: 61  SASRMIPRPN------GGGYTQIVPRSAPRSIPQWFKREGSRNPRTVGLEQDDEDGVDGD 120

Query: 121 GGD-SEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNA 180
           GGD S+  EE+E EEGF+NRVPPHEL+AKRLARAQISSFSVFEGVGRTLKGRDLSKVRNA
Sbjct: 121 GGDGSDSAEEDEEEEGFDNRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNA 180

Query: 181 VLNKTGFLESL 191
           VLNKTGFLESL
Sbjct: 181 VLNKTGFLESL 184

[Close]

BLAST of Lsi02G019000 vs. NCBI nr
Match: XP_022139627.1 (uncharacterized protein LOC111010482 [Momordica charantia])

HSP 1 Score: 236.1 bits (601), Expect = 2.5e-58
Identity = 136/197 (69.04%), Postives = 150/197 (76.14%), Query Frame = 0


Query: 1   MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIES- 60
           M+GG  GL   S+ALWRSFRNGDFEEEDVW+VL +KSTTT S ++D S F TDSSI+ S 
Sbjct: 1   MEGGGHGLSRQSSALWRSFRNGDFEEEDVWDVLKEKSTTTNSKSSDDSKFFTDSSIVASV 60

Query: 61  ---SFLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDD 120
              +  P A  MIPRPNGSG        QI PRSAPRSIPQWF   G+KNPRK   E DD
Sbjct: 61  SAANHFPSAYGMIPRPNGSGN------FQIAPRSAPRSIPQWFTPNGNKNPRKSVPEHDD 120

Query: 121 EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDL 180
           + G G D GDSE+E+    EEGF+ RVPPHEL+AKRLARAQISSFSVFEGVGRTLKGRDL
Sbjct: 121 DGGGGDDDGDSEDED----EEGFDCRVPPHELIAKRLARAQISSFSVFEGVGRTLKGRDL 180

Query: 181 SKVRNAVLNKTGFLESL 191
           SKVRNAVL KTGFLESL
Sbjct: 181 SKVRNAVLTKTGFLESL 187

[Close]

BLAST of Lsi02G019000 vs. NCBI nr
Match: KAG6592046.1 (hypothetical protein SDJN03_14392, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.0 bits (580), Expect = 6.7e-56
Identity = 133/198 (67.17%), Postives = 147/198 (74.24%), Query Frame = 0


Query: 1   MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS 60
           M GGR G+   S+ALWRSFRNGDFEEEDVW VL +KS  TTS T+D S+F +DS I+ES+
Sbjct: 1   MAGGRNGVSRQSSALWRSFRNGDFEEEDVWEVLKEKS-KTTSKTSDDSSFFSDSLIVESA 60

Query: 61  ----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDD 120
                LP ASRMIPR NG G        QI  RSAPRSIPQWFK  GSKNPR   SE DD
Sbjct: 61  SVNHLLPSASRMIPRSNGGGN------AQIASRSAPRSIPQWFKPNGSKNPRNFASEHDD 120

Query: 121 --EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGR 180
              DG   DGGDS+       +EGF+NR+PPHEL+AKR ARAQISSFSVFEG+GRTLKGR
Sbjct: 121 SWSDGVASDGGDSD-------DEGFDNRIPPHELIAKRRARAQISSFSVFEGIGRTLKGR 180

Query: 181 DLSKVRNAVLNKTGFLES 190
           DLSKVRNAVLNKTGFLES
Sbjct: 181 DLSKVRNAVLNKTGFLES 184

[Close]

BLAST of Lsi02G019000 vs. NCBI nr
Match: KAG7024924.1 (hypothetical protein SDJN02_13744, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 227.6 bits (579), Expect = 8.8e-56
Identity = 133/198 (67.17%), Postives = 147/198 (74.24%), Query Frame = 0


Query: 1   MDGGRIGL---STALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESS 60
           M GGR G+   S+ALWRSFRNGDFEEEDVW VL +KS  TTS T+D S+F +DS I+ES+
Sbjct: 1   MAGGRNGVSRQSSALWRSFRNGDFEEEDVWEVLKEKS-KTTSKTSDDSSFFSDSLILESA 60

Query: 61  ----FLPCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDD 120
                LP ASRMIPR NG G        QI  RSAPRSIPQWFK  GSKNPR   SE DD
Sbjct: 61  SVNHLLPSASRMIPRSNGGGN------AQIASRSAPRSIPQWFKPNGSKNPRNFASEHDD 120

Query: 121 --EDGSGGDGGDSEEEEEEEGEEGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGR 180
              DG   DGGDS+       +EGF+NR+PPHEL+AKR ARAQISSFSVFEG+GRTLKGR
Sbjct: 121 SWSDGVASDGGDSD-------DEGFDNRIPPHELIAKRRARAQISSFSVFEGIGRTLKGR 180

Query: 181 DLSKVRNAVLNKTGFLES 190
           DLSKVRNAVLNKTGFLES
Sbjct: 181 DLSKVRNAVLNKTGFLES 184

[Close]

BLAST of Lsi02G019000 vs. NCBI nr
Match: KAA0025150.1 (casein kinase II subunit beta-2 [Cucumis melo var. makuwa] >TYK23108.1 casein kinase II subunit beta-2 [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-54
Identity = 135/197 (68.53%), Postives = 142/197 (72.08%), Query Frame = 0


Query: 1   MDGGRIGLSTALWRSFRNGDFEEEDVWNVLNDKSTTTTSTTTD-HSNFCTDSSIIESSFL 60
           MDG R  L+TALWRSFRNGDFEE+DVWNVLND  +TTTSTTT  HSNF T     +SSFL
Sbjct: 1   MDGARTALTTALWRSFRNGDFEEQDVWNVLNDDESTTTSTTTSYHSNFST----ADSSFL 60

Query: 61  PCASRMIPRPNGSGGGGGGSYVQIVPRSAPRSIPQWFKREGSKNPRK-----LGSEQDDE 120
           P ASRMIPRPNG  GG  G             IPQW K E SKNPR         E+DDE
Sbjct: 61  PSASRMIPRPNGGVGGQIG------------LIPQWLKSERSKNPRNRIRKVCWDEEDDE 120

Query: 121 DGSGGDGGDSEEEEEEEGE-EGFENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDL 180
           DG  G G   EEEEEEE E EG E RVPPHEL+AKRLARAQISSFSVFEG GRTLKGRDL
Sbjct: 121 DGVEGGGHSKEEEEEEEEEGEGIEKRVPPHELIAKRLARAQISSFSVFEGAGRTLKGRDL 180

Query: 181 SKVRNAVLNKTGFLESL 191
           SKVRNAVL KTGFLES+
Sbjct: 181 SKVRNAVLTKTGFLESI 181

[Close]

BLAST of Lsi02G019000 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 76/173 (43.93%), Postives = 95/173 (54.91%), Query Frame = 0


Query: 20  DFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGS 79
           +F+EEDVW+VL +  T++       S+F + SS   SS  P   R     +G        
Sbjct: 26  EFQEEDVWSVLREGETSSPEMKIPKSHFSSSSS---SSSSPWNIRRSKEVSG-------- 85

Query: 80  YVQIVPRSAPRSIPQWFKREG-SKNPRK---LGSEQDDEDGSGGDGGDSEEEEEEEGEEG 139
              +   SAP ++P W K  G SK+ R+   L S   D+D    DG              
Sbjct: 86  ---VKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDG-------------- 145

Query: 140 FENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE 189
               VPPHE VA++LAR QISSFS+ EGVGRTLKGRDLSKVRNAVL+KTGFLE
Sbjct: 146 --CMVPPHEWVARKLARTQISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of Lsi02G019000 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 77/173 (44.51%), Postives = 91/173 (52.60%), Query Frame = 0


Query: 20  DFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGGGS 79
           +F+EE+VW+VL +  T         SN    +S   S      +R IP+ N   GG   S
Sbjct: 6   EFQEEEVWSVLRESETQGPEMKMSKSNNLFSASSSSS------ARYIPKGNEVSGGAKQS 65

Query: 80  YVQIVPRSAPRSIPQWFKREG--SKNPRK-LGSEQDDEDGSGGDGGDSEEEEEEEGEEGF 139
                  SAP +IP W K  G   KN    L S   D+D  G                  
Sbjct: 66  -------SAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEG------------------ 125

Query: 140 ENRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLES 190
            + VPPHELVAKRLAR QISSFS+ EG+GRTLKGRDLSK RNAVL +TGFLES
Sbjct: 126 -SMVPPHELVAKRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLTRTGFLES 146

[Close]

BLAST of Lsi02G019000 vs. TAIR 10
Match: AT4G26950.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13
Identity = 60/171 (35.09%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 18  NGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGG 77
           +GDF+E+DVW+VL+       S     SN  T  S    + LP   RMIP    + G   
Sbjct: 13  DGDFQEDDVWDVLDGYQ----SPFMISSNHTTKPSFSTQTLLPSEPRMIPERQRTEG--- 72

Query: 78  GSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFE 137
                +  +S P ++P W   +  K  + +    DDE+                      
Sbjct: 73  --MAPMRQQSVPVNVPDWSMVQRKKTKKVV----DDEN---------------------- 132

Query: 138 NRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE 189
             V P E   +R   +  SS SV EGVGR LKGRDLSKVRNA+L +TGFLE
Sbjct: 133 --VSPEEYFLRRSRSS--SSSSVMEGVGRKLKGRDLSKVRNAILKQTGFLE 144

[Close]

BLAST of Lsi02G019000 vs. TAIR 10
Match: AT4G26950.2 (Protein of unknown function, DUF584 )

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13
Identity = 60/171 (35.09%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 18  NGDFEEEDVWNVLNDKSTTTTSTTTDHSNFCTDSSIIESSFLPCASRMIPRPNGSGGGGG 77
           +GDF+E+DVW+VL+       S     SN  T  S    + LP   RMIP    + G   
Sbjct: 13  DGDFQEDDVWDVLDGYQ----SPFMISSNHTTKPSFSTQTLLPSEPRMIPERQRTEG--- 72

Query: 78  GSYVQIVPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFE 137
                +  +S P ++P W   +  K  + +    DDE+                      
Sbjct: 73  --MAPMRQQSVPVNVPDWSMVQRKKTKKVV----DDEN---------------------- 132

Query: 138 NRVPPHELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE 189
             V P E   +R   +  SS SV EGVGR LKGRDLSKVRNA+L +TGFLE
Sbjct: 133 --VSPEEYFLRRSRSS--SSSSVMEGVGRKLKGRDLSKVRNAILKQTGFLE 144

[Close]

BLAST of Lsi02G019000 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 72.0 bits (175), Expect = 5.8e-13
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 84  VPRSAPRSIPQWFKREGSKNPRKLGSEQDDEDGSGGDGGDSEEEEEEEGEEGFENRVPPH 143
           V  S P ++  W K  G +N + +  E DD+ G G                    ++PPH
Sbjct: 70  VASSLPMNVQNWSKILGKENRKSI--ENDDDGGEG--------------------KLPPH 129

Query: 144 ELVAKRLARAQISSFSVFEGVGRTLKGRDLSKVRNAVLNKTGFLE 189
           E     LA+ +++SFSV EG+GRTLKGRD+S+VRNA+L KTGFL+
Sbjct: 130 EY----LAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

The following BLAST results are available for this feature:

BLAST of Lsi02G019000 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi02G019000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEH3	1.2e-58	69.04	uncharacterized protein LOC111010482 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0K3A6	7.3e-56	69.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211080 PE=4 SV=1	[more]
A0A5A7SG90	6.1e-55	68.53	Casein kinase II subunit beta-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BIQ4	2.3e-54	66.83	casein kinase II subunit beta-2 OS=Cucumis melo OX=3656 GN=LOC103490138 PE=4 SV=...	[more]
A0A6J1F7L6	9.8e-53	65.66	uncharacterized protein LOC111442861 OS=Cucurbita moschata OX=3662 GN=LOC1114428...	[more]

BLAST of Lsi02G019000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898769.1	1.9e-74	81.68	uncharacterized protein LOC120086282 [Benincasa hispida]	[more]
XP_022139627.1	2.5e-58	69.04	uncharacterized protein LOC111010482 [Momordica charantia]	[more]
KAG6592046.1	6.7e-56	67.17	hypothetical protein SDJN03_14392, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7024924.1	8.8e-56	67.17	hypothetical protein SDJN02_13744, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAA0025150.1	1.3e-54	68.53	casein kinase II subunit beta-2 [Cucumis melo var. makuwa] >TYK23108.1 casein ki...	[more]

BLAST of Lsi02G019000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04630.1	1.2e-21	43.93	Protein of unknown function, DUF584	[more]
AT4G21970.1	1.2e-21	44.51	Protein of unknown function, DUF584	[more]
AT4G26950.1	2.0e-13	35.09	Protein of unknown function, DUF584	[more]
AT4G26950.2	2.0e-13	35.09	Protein of unknown function, DUF584	[more]
AT3G45210.1	5.8e-13	40.95	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 20..188 e-value: 4.3E-34 score: 118.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..135
None	No IPR available	PANTHER	PTHR33083	EXPRESSED PROTEIN	coord: 10..188
None	No IPR available	PANTHER	PTHR33083:SF82	CYTOSKELETON-REGULATORY COMPLEX PROTEIN END3, PUTATIVE ISOFORM 9-RELATED	coord: 10..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G019000.1	Lsi02G019000.1	mRNA